BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.20
(1583 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 938 0.0
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 936 0.0
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 933 0.0
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 926 0.0
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 916 0.0
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 915 0.0
gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 890 0.0
gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cult... 884 0.0
ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (jap... 882 0.0
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana] 882 0.0
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 878 0.0
ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultiva... 878 0.0
ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica... 877 0.0
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa (japonica cultivar... 870 0.0
gb|AAP53706.1| hypothetical protein [Oryza sativa (japonica cult... 861 0.0
ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cu... 829 0.0
ref|XP_463224.1| putative integrase [Oryza sativa (japonica cult... 779 0.0
gb|AAP94592.1| retrotransposon Opie-2 [Zea mays] 729 0.0
gb|AAL66759.1| putative pol protein [Zea mays] 727 0.0
gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 715 0.0
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 938 bits (2424), Expect = 0.0
Identities = 475/1019 (46%), Positives = 666/1019 (64%), Gaps = 12/1019 (1%)
Query: 558 ILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIG 617
++ SL A K + WYLDSGCSRHMTG + ++ V FG KGKI+G G +
Sbjct: 549 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 607
Query: 618 VDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNT 677
D P ++ VLLV GL NL+SISQL D+G+++ F + C + ++ S+ ++N
Sbjct: 608 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 667
Query: 678 YKIRLSELETQKVKCLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDAL 731
Y E CL S +E +WH+R GH M K+ VRG+P LK +
Sbjct: 668 YLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 726
Query: 732 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTW 791
C CQ GK K+ + +TSR LELLH+DL G ++ ES+GGKRY V+VDD+S +TW
Sbjct: 727 CGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 786
Query: 792 VKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSC 851
V F+ K E+ VF ++Q EK C I R+RSDHG EFEN +F S GI H+FS
Sbjct: 787 VNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSA 846
Query: 852 PRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPY 911
T QQNG++ERKNRTLQE AR ML ++ + WAEA+NT CYI NR+++R T Y
Sbjct: 847 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 906
Query: 912 ELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKT 971
E+WK KP+ +FH FG CY L ++++ K D KS + LGYS S+ +R++N+ +T
Sbjct: 907 EIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 966
Query: 972 IEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQK 1031
+ E I+V DD + + + E + NV+D K+ E AE + + +E ++ +
Sbjct: 967 VMESINVVVDDLSPARKKDVEEDVRTLGDNVADAAKSGENAENSDSATDESNINQPDKRS 1026
Query: 1032 KSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWIL 1091
+RI HPKELI+G + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1027 STRIQKMHPKELIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWIN 1082
Query: 1092 TMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEG 1151
M+EEL QF +N+VW LV +P+G +++GTKW+F+NK NE+G + RNKARLVAQG +Q EG
Sbjct: 1083 AMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEG 1142
Query: 1152 IDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEK 1211
+D+ ETFA VARLE+IRLL+ + ++QMDVKSAFLNGY++EEVYV QP GF D
Sbjct: 1143 VDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPT 1202
Query: 1212 NPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYV 1271
+PDHV++LKK+LYGLKQAPRAWY RL+ FL + +G +D TLF K +++ I QIYV
Sbjct: 1203 HPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYV 1262
Query: 1272 DDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLK 1331
DDI+FG + + + F + MQ+E EMS +GEL YFLG+QV Q ++ ++ QS+Y K ++K
Sbjct: 1263 DDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVK 1322
Query: 1332 KFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCAR 1391
KF M+ ++ +TP L K++ V Q +YR MIGSLLYLTASRPDI ++V +CAR
Sbjct: 1323 KFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCAR 1382
Query: 1392 FQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNC 1451
+Q++P+ +HLT VKRI +Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C
Sbjct: 1383 YQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGC 1442
Query: 1452 QFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDN 1511
+LG+NL+SW SK+Q+ ++LS AEAEYI+A +Q++W K L++Y + + + +YCDN
Sbjct: 1443 FYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1502
Query: 1512 TAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI++SKNP+ HSR KHI++++H+IRD V V+ LK VDT+ Q A+IFTK L ++F
Sbjct: 1503 MSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQF 1561
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 936 bits (2420), Expect = 0.0
Identities = 475/1019 (46%), Positives = 665/1019 (64%), Gaps = 12/1019 (1%)
Query: 558 ILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIG 617
++ SL A K + WYLDSGCSRHMTG + ++ V FG KGKI+G G +
Sbjct: 547 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 605
Query: 618 VDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNT 677
D P ++ VLLV GL NL+SISQL D+G+++ F + C + ++ S+ ++N
Sbjct: 606 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 665
Query: 678 YKIRLSELETQKVKCLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDAL 731
Y E CL S +E +WH+R GH M K+ VRG+P LK +
Sbjct: 666 YLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 724
Query: 732 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTW 791
C CQ GK K+ + +TSR LELLH+DL G ++ ES+GGKRY V+VDD+S +TW
Sbjct: 725 CGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 784
Query: 792 VKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSC 851
VKF+ K E+ VF ++Q EK C I R+RSDHG EFEN + S GI H+FS
Sbjct: 785 VKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCTSEGITHEFSA 844
Query: 852 PRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPY 911
T QQNG++ERKNRTLQE AR ML ++ + WAEA+NT CYI NR+++R T Y
Sbjct: 845 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 904
Query: 912 ELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKT 971
E+WK KP+ +FH FG CY L ++++ K D KS + LGYS S+ +R++N+ +T
Sbjct: 905 EIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 964
Query: 972 IEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQK 1031
+ E I+V DD + + + E NV+D K+ E AE + + +E ++ +
Sbjct: 965 VMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENSDSATDESNINQPDKRS 1024
Query: 1032 KSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWIL 1091
+RI HPKELI+G + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1025 STRIQKMHPKELIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWIN 1080
Query: 1092 TMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEG 1151
M+EEL QF +N+VW LV +P+G +++GTKW+F+NK NE+G + RNKARLVAQG +Q EG
Sbjct: 1081 AMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEG 1140
Query: 1152 IDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEK 1211
+D+ ETFA VARLE+IRLL+ + ++QMDVKSAFLNGY++EEVYV QP GF D
Sbjct: 1141 VDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPT 1200
Query: 1212 NPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYV 1271
+PDHV++LKK+LYGLKQAPRAWY RL+ FL + +G +D TLF K +++ I QIYV
Sbjct: 1201 HPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYV 1260
Query: 1272 DDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLK 1331
DDI+FG + + + F + MQ+E EMS +GEL YFLG+QV Q ++ ++ QS+Y K ++K
Sbjct: 1261 DDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVK 1320
Query: 1332 KFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCAR 1391
KF M+ ++ +TP L K++ V Q +YR MIGSLLYLTASRPDI ++V +CAR
Sbjct: 1321 KFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCAR 1380
Query: 1392 FQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNC 1451
+Q++P+ +HLT VKRI +Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C
Sbjct: 1381 YQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGC 1440
Query: 1452 QFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDN 1511
+LG+NL+SW SK+Q+ ++LS AEAEYI+A +Q++W K L++Y + + + +YCDN
Sbjct: 1441 FYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1500
Query: 1512 TAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI++SKNP+ HSR KHI++++H+IRD V V+ LK VDT+ Q A+IFTK L ++F
Sbjct: 1501 MSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQF 1559
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 933 bits (2411), Expect = 0.0
Identities = 474/1019 (46%), Positives = 663/1019 (64%), Gaps = 12/1019 (1%)
Query: 558 ILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIG 617
++ SL A K + WYLDSGCSRHMTG + ++ V FG KGKI+G G +
Sbjct: 549 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 607
Query: 618 VDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNT 677
D P ++ VLLV GL NL+SISQL D+G+++ F + C + ++ S+ ++N
Sbjct: 608 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 667
Query: 678 YKIRLSELETQKVKCLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDAL 731
Y E CL S +E +WH+R GH M K+ VRG+P LK +
Sbjct: 668 YLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVRGIPNLKIEEGRI 726
Query: 732 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTW 791
C CQ GK K+ + +TSR LELLH+DL G ++ ES+GGKRY V+VDD+S +TW
Sbjct: 727 CGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 786
Query: 792 VKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSC 851
V F+ K + VF ++Q EK C I R+RSDHG EFEN +F S GI H+FS
Sbjct: 787 VNFIREKSGTFEVFKKLSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSA 846
Query: 852 PRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPY 911
T QQNG++ERKNRTLQE AR ML ++ + WAEA+NT CYI NR+++R T Y
Sbjct: 847 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 906
Query: 912 ELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKT 971
E+WK KP+ +FH FG CY L ++++ K D KS + LGYS S+ +R++N+ +T
Sbjct: 907 EIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 966
Query: 972 IEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQK 1031
+ E I+V DD + + + E NV+D K+ E AE + + +E ++ +
Sbjct: 967 VMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGENAENSDSATDESNINQPDKRS 1026
Query: 1032 KSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWIL 1091
+RI HPKELI+G + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1027 STRIQKMHPKELIIGDPNRGVTTRSR----EVEIVSNSCFVSKIEPKNVKEALTDEFWIN 1082
Query: 1092 TMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEG 1151
M+EEL QF +N+VW LV +P+G +++GTKW+F+NK NE+G + RNKARLVAQG +Q EG
Sbjct: 1083 AMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEG 1142
Query: 1152 IDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEK 1211
+D+ ETFA VARLE+IRLL+ + ++QMDVKSAFLNGY++EEVYV QP GF D
Sbjct: 1143 VDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPT 1202
Query: 1212 NPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYV 1271
+PDHV++LKK+LYGLKQAPRAWY RL+ FL + +G +D TLF K +++ I QIYV
Sbjct: 1203 HPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYV 1262
Query: 1272 DDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLK 1331
DDI+FG + + + F + MQ+E EMS +GEL YFLG+QV Q ++ ++ QS+Y K ++K
Sbjct: 1263 DDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVK 1322
Query: 1332 KFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCAR 1391
KF M+ ++ +TP L K++ V QK YR MIGSLLYLTASRPDI ++V +CAR
Sbjct: 1323 KFGMENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCAR 1382
Query: 1392 FQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNC 1451
+Q++P+ +HL VKRI +Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C
Sbjct: 1383 YQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGC 1442
Query: 1452 QFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDN 1511
+LG+NL+SW SK+Q+ ++LS AEAEYI+A +Q++W K L++Y + + + +YCDN
Sbjct: 1443 FYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1502
Query: 1512 TAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI++SKNP+ HSR KHI++++H+IRD V V+ LK VDT+ Q A+IFTK L ++F
Sbjct: 1503 MSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQF 1561
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 926 bits (2394), Expect = 0.0
Identities = 471/1019 (46%), Positives = 660/1019 (64%), Gaps = 12/1019 (1%)
Query: 558 ILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIG 617
++ SL A K + WYLDSGCSRHMTG + ++ V FG KGKI G G +
Sbjct: 550 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 608
Query: 618 VDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNT 677
+ P ++ VLLV GL NL+SISQL D+G+++ F + C + ++ S+ ++N
Sbjct: 609 HEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 668
Query: 678 YKIRLSELETQKVKCLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDAL 731
Y E + CL S +E +WH+R GH M K+ VRG+P LK +
Sbjct: 669 YLWTPQE-SSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 727
Query: 732 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTW 791
C CQ GK K+ + +TSR LELLH+DL G ++ ES+GGKRY V+VDD+S +TW
Sbjct: 728 CGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 787
Query: 792 VKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSC 851
V F+ K ++ VF ++Q EK C I R+RSDHG EFEN KF S GI H+FS
Sbjct: 788 VNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSA 847
Query: 852 PRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPY 911
T QQNG++ERKNRTLQE AR ML ++ + WAEA+NT CYI NR+++R T Y
Sbjct: 848 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 907
Query: 912 ELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKT 971
E+WK KP +FH FG CY L ++++ K D KS + LGYS S+ +R++N+ +T
Sbjct: 908 EIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 967
Query: 972 IEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQK 1031
+ E I+V DD + + + E NV+D K+ E AE + + +E ++ +
Sbjct: 968 VMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEPNINQPDKRP 1027
Query: 1032 KSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWIL 1091
RI HPKELI+G + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1028 SIRIQKMHPKELIIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEFWIN 1083
Query: 1092 TMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEG 1151
M+EEL QF +N+VW LV +P+G +++GTKW+F+NK NE+G + RNKARLVAQG +Q EG
Sbjct: 1084 AMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEG 1143
Query: 1152 IDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEK 1211
+D+ ETFA VARLE+IRLL+ + ++QMDVKSAFLNGY++EE YV QP GF D
Sbjct: 1144 VDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPT 1203
Query: 1212 NPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYV 1271
+PDHV++LKK+LYGLKQAPRAWY RL+ FL + +G +D TLF K +++ I QIYV
Sbjct: 1204 HPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYV 1263
Query: 1272 DDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLK 1331
DDI+FG + + + F + MQ+E EMS +GEL YFLG+QV Q ++ ++ QSKY K ++K
Sbjct: 1264 DDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVK 1323
Query: 1332 KFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCAR 1391
KF M+ ++ +TP L K++ V Q +YR MIGSLLYLTASRPDI ++V +CAR
Sbjct: 1324 KFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCAR 1383
Query: 1392 FQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNC 1451
+Q++P+ +HL VKRI +Y+ GT++ G+MY S L GYCDAD+AG +RKSTSG C
Sbjct: 1384 YQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGC 1443
Query: 1452 QFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDN 1511
+LG+NL+SW SK+Q+ ++LS AEAEYI+A +Q++W K L++Y + + + +YCDN
Sbjct: 1444 FYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1503
Query: 1512 TAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI++SKNP+ HSR KHI++++H+IR+ V V+ L+ VDT+ Q A+IFTK L +F
Sbjct: 1504 MSAINISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQF 1562
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 916 bits (2367), Expect = 0.0
Identities = 468/1019 (45%), Positives = 655/1019 (63%), Gaps = 12/1019 (1%)
Query: 558 ILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIG 617
++ SL A K + WYLDSGCSRHMTG + ++ V FG KGKI G G +
Sbjct: 523 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 581
Query: 618 VDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNT 677
D P ++ VLLV GL NL+SISQL D+G+++ F + C + ++ S+ ++N
Sbjct: 582 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 641
Query: 678 YKIRLSELETQKVKCLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDAL 731
Y E CL S +E +WH+R GH M K+ VRG+P LK +
Sbjct: 642 YLWTPQETSYSST-CLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 700
Query: 732 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTW 791
C CQ GK K+ + +TSR LELLH+DL G ++ ES+G KRY V+VDD+S +TW
Sbjct: 701 CGECQIGKQVKMSNQKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTW 760
Query: 792 VKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSC 851
V F+ K ++ VF ++Q EK C I R+RSDHG EFEN KF S GI H+FS
Sbjct: 761 VNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSA 820
Query: 852 PRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPY 911
T QQNG++ERKNRTLQE AR ML ++ + WAEA+NT CYI NR+++R T Y
Sbjct: 821 AITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 880
Query: 912 ELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKT 971
E+WK KP +FH G CY L ++++ K D KS + LGYS S+ +R++N+ +T
Sbjct: 881 EIWKGRKPTVKHFHICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 940
Query: 972 IEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQK 1031
+ E I+V DD + + + E NV+D K+ E AE + + +E ++ +
Sbjct: 941 VMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEPNINQPDKRP 1000
Query: 1032 KSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWIL 1091
RI HPKELI+G + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1001 SIRIQKMHPKELIIGDPNRGVTTRSR----EIEIISNSCFVSKIEPKNVKEALTDEFWIN 1056
Query: 1092 TMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEG 1151
M+EEL QF +N+VW LV +P+G +++GTKW+F+NK NE+G + RNKARLVAQG +Q EG
Sbjct: 1057 AMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEG 1116
Query: 1152 IDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEK 1211
+D+ ETFA ARLE+IRLL+ + ++QMDVKSAFLNGY++EE YV QP GF D
Sbjct: 1117 VDFDETFAPGARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPT 1176
Query: 1212 NPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYV 1271
+PDHV++LKK+LYGLKQAPRAWY RL+ FL + +G +D TLF K +++ I QIYV
Sbjct: 1177 HPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYV 1236
Query: 1272 DDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLK 1331
DDI+FG + + + F + MQ+E EMS +GEL YFLG+QV Q ++ ++ QSKY K ++K
Sbjct: 1237 DDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVK 1296
Query: 1332 KFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCAR 1391
KF M+ ++ +TP L K++ V Q +YR MIGSLLYLTASRPDI ++V CAR
Sbjct: 1297 KFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGGCAR 1356
Query: 1392 FQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNC 1451
+Q++P+ +HL VKRI +Y+ GT++ G+MY S+ L GYCDAD+AG +RKST G C
Sbjct: 1357 YQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTFGGC 1416
Query: 1452 QFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDN 1511
+LG+N +SW SK+Q+ ++LS AEAEYI+A +Q++W K L++Y + + + +YCDN
Sbjct: 1417 FYLGTNFISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1476
Query: 1512 TAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI++SKNP+ HSR KHI++++H+IRD V V+ L+ VDT+ Q A+IFTK L ++F
Sbjct: 1477 LSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKALDANQF 1535
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 915 bits (2366), Expect = 0.0
Identities = 467/1019 (45%), Positives = 654/1019 (63%), Gaps = 12/1019 (1%)
Query: 558 ILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIG 617
++ SL A K + WYLDSGCSRHMTG + ++ V FG KGKI G G +
Sbjct: 549 VVHTSLRASAK-EDWYLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLV 607
Query: 618 VDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNT 677
D P ++ VLLV GL NL+SISQL D+G+++ F + C + ++ S+ ++N
Sbjct: 608 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 667
Query: 678 YKIRLSELETQKVKCLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDAL 731
Y E CL S +E +WH+R GH M K+ VRG+P LK +
Sbjct: 668 YLWTPQETSYSST-CLSSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRI 726
Query: 732 CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTW 791
C CQ GK K+ + +TS LELLH+DL G ++ ES+GGKRY V+VDD+S +TW
Sbjct: 727 CGECQIGKQVKMSHQKLQHQTTSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTW 786
Query: 792 VKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSC 851
V F+ K ++ VF ++Q EK C I R+RSDHG EFEN KF S GI H+FS
Sbjct: 787 VNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSA 846
Query: 852 PRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPY 911
T QQNG++ERKNRTLQE R ML ++ + WAEA+NT CYI NR+++R T Y
Sbjct: 847 AITPQQNGIVERKNRTLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLY 906
Query: 912 ELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKT 971
E+WK KP +FH FG CY L ++++ K D KS + LGYS S+ +R++N+ +T
Sbjct: 907 EIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRT 966
Query: 972 IEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQK 1031
+ E I+V DD + + + E NV+D K+ E AE + + +E ++
Sbjct: 967 VMESINVVVDDLTPARKKDVEEDVRTSEDNVADTAKSAENAEKSDSTTDEPNINQPDKSP 1026
Query: 1032 KSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWIL 1091
RI PKELI+G + V TRS E ++S VS IEPK++ EAL D+ WI
Sbjct: 1027 FIRIQKMQPKELIIGDPNRGVTTRSR----EIEIVSNSCFVSKIEPKNVKEALTDEFWIN 1082
Query: 1092 TMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEG 1151
M+EEL QF +N+VW LV +P+G +++GTKW+F+NK NE+G + RNKARLVAQG +Q EG
Sbjct: 1083 AMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEG 1142
Query: 1152 IDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEK 1211
+D+ ETFA VARLE+IRLL+ + ++QMDVKSAFLNGY++EE YV QP GF D
Sbjct: 1143 VDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPT 1202
Query: 1212 NPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYV 1271
+ DHV++LKK+LYGLKQAPRAWY RL+ FL + +G +D TLF K +++ I QIYV
Sbjct: 1203 HLDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYV 1262
Query: 1272 DDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLK 1331
DDI+FG + + + F MQ+E EMS +GEL YFLG+QV Q ++ ++ QSKY K ++K
Sbjct: 1263 DDIVFGGMSNEMLRHFVPQMQSEFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVK 1322
Query: 1332 KFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCAR 1391
KF M+ ++ +TP L K++ V Q +YR MIGSLLYLTASRPDI F+V +CAR
Sbjct: 1323 KFGMENASHKRTPAPTHLKLSKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCAR 1382
Query: 1392 FQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNC 1451
+Q++P+ +HL VKRI +Y+ GT++ G+MY S+ L GYCDAD+AG +RK TSG C
Sbjct: 1383 YQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTSGGC 1442
Query: 1452 QFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDN 1511
+LG+NL+SW SK+Q+ ++LS AEAEYI+A +Q++W K L++Y + + + +YCDN
Sbjct: 1443 FYLGTNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDN 1502
Query: 1512 TAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI++SKNP+ H+R KHI++++H+IRD V ++ L+ VDT+ Q A+IFTK L ++F
Sbjct: 1503 MSAINISKNPVQHNRTKHIDIRHHYIRDLVDDKIITLEHVDTEEQVADIFTKALDANQF 1561
>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902324|ref|NP_912508.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2011
Score = 890 bits (2301), Expect = 0.0
Identities = 485/1044 (46%), Positives = 643/1044 (61%), Gaps = 56/1044 (5%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGG----EVGFGGNEKGKIVGSGTIGVDNSPCIDNV 627
W LDSGC++HMTG+R MF ++ GG +V FG N KGK++G G I + N IDNV
Sbjct: 558 WVLDSGCTQHMTGDRAMFTTFEV--GGNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNV 615
Query: 628 LLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELET 687
LV LN NLLS++Q+ D F + S +D S +F R N Y + E
Sbjct: 616 SLVKSLNFNLLSVAQICDLVLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLGDFNSSEA 675
Query: 688 QKVKCLLSVNEEQWVWHRRLGHASM------SKLDLVRGLPTLKFSSDALCEACQKGKFT 741
CL++ W+WHRRL H M SK DLV GL +KF D LC ACQ GK
Sbjct: 676 NLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQV 735
Query: 742 KVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDES 801
K+++STSRPLELLH++ FG +SIGG + +VIVDDYS +TW+ FL K
Sbjct: 736 ACSHPTKSIMSTSRPLELLHMEFFGPTTYKSIGGNSHCLVIVDDYSRYTWMFFLHDKSIV 795
Query: 802 HSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVI 861
+F F + QNE C ++++RSD+G +F+N E D GI H+ S + QQNGV+
Sbjct: 796 AELFKKFAKRGQNEFNCTLVKIRSDNGSKFKNTNIEDYCDDLGIKHELSATYSPQQNGVV 855
Query: 862 ERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNF 921
E KNRTL EMARTML E ++ FWAEA+NT C+ NR+ + +L KT YEL KPN
Sbjct: 856 EMKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYELIVGRKPNV 915
Query: 922 SYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFD 981
+YF FGC CY RL KF+S+ + LLGY+ SK +R+YN + +EE V+FD
Sbjct: 916 AYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIVEETADVQFD 975
Query: 982 DKLDSDQSK----------LVEKFADMSIN------VSDKGKAPEEAEPEEDS------- 1018
+ S + L+ +MSI V DK + EP +
Sbjct: 976 ETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPSTSATPSQAQV 1035
Query: 1019 -LEEVGLSD--SQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLI 1075
+EE D P+ + + HP + +LG + V TRS ++ VS +
Sbjct: 1036 EVEEEKAQDLPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVA----SICEHYSFVSCL 1091
Query: 1076 EPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVV 1135
EPK +DEAL D DWI M +ELN F++N VW LV++ + +++GTKWVFRNK +E G VV
Sbjct: 1092 EPKHVDEALCDPDWINAMHKELNNFARNKVWTLVERLRDHNVIGTKWVFRNKQDENGLVV 1151
Query: 1136 RNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYI 1195
RNKAR VAQG +Q EG+D+ ETFA V RLEAI +L++F+ NI + QMDVKSAFLNG I
Sbjct: 1152 RNKARFVAQGFTQVEGLDFGETFAPVTRLEAICILLAFASCFNIKLFQMDVKSAFLNGEI 1211
Query: 1196 SEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTL 1255
+E V+V QPPGFED K P+HV+KL K+LYGLKQAPRAWY RL FLL +F GKVDTTL
Sbjct: 1212 AELVFVEQPPGFEDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTL 1271
Query: 1256 FCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKP 1315
F K DD + QIYVDDIIFG N CKEF +MM E EMS +GEL +F G+Q+ Q
Sbjct: 1272 FTKIIGDDFFVCQIYVDDIIFGCTNEVFCKEFGDMMSREFEMSMIGELSFFHGLQIKQLK 1331
Query: 1316 EATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYL 1375
+ T F ++ + KTPM L+ ++ V K+YR MIGSLLYL
Sbjct: 1332 DGT--------------FGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYL 1377
Query: 1376 TASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDA 1435
TASRPDI+FSV +CARFQ+ P+E HL AVKRI RYLK ++ +GL Y K +++KL GY D+
Sbjct: 1378 TASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDS 1437
Query: 1436 DYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQL 1495
DYAG + +RKSTSG+CQ LG +LVSW+SK+Q+ +AL +AEAEY+SA C Q+LW K L
Sbjct: 1438 DYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALFIAEAEYVSAGSCCAQLLWMKQIL 1497
Query: 1496 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDH 1555
DY I + P+ C+N +AI ++ NP+ HSR KHI++++HF+RD+V K +++ + T+
Sbjct: 1498 LDYGISFTKTPLLCENDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTED 1557
Query: 1556 QWANIFTKPLADDRFNFILKNLNM 1579
Q A+IFTKPL + RF + LN+
Sbjct: 1558 QLADIFTKPLDETRFCKLRNELNL 1581
>gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1577
Score = 884 bits (2283), Expect = 0.0
Identities = 479/1042 (45%), Positives = 638/1042 (60%), Gaps = 54/1042 (5%)
Query: 572 WYLDSGCSRHMTGERRMFQ--ELKLKPGGEVGFGGNEKGKIVGSGTIGVDNSPCIDNVLL 629
W LDSGC++HMTG+R MF E+ +V FG N KGK++G G I + N IDNV L
Sbjct: 549 WVLDSGCTQHMTGDRAMFTTFEVGRNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNVSL 608
Query: 630 VDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELETQK 689
V LN NLLS++Q+ D F + S +D S +F R N Y + + E
Sbjct: 609 VKSLNFNLLSVAQICDLSLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLVDFNSSEANL 668
Query: 690 VKCLLSVNEEQWVWHRRLGHASM------SKLDLVRGLPTLKFSSDALCEACQKGKFTKV 743
CL++ W+WHRRL H M SK DLV GL +KF D LC ACQ GK
Sbjct: 669 KTCLVAKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGLKDVKFEKDKLCSACQAGKQVAC 728
Query: 744 PFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESHS 803
K+++STS+PLELLH+DLF +SIGG + +VIVDDYS +TWV FL K
Sbjct: 729 SHPTKSIMSTSKPLELLHMDLFDPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIVAD 788
Query: 804 VFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIER 863
+F F + QNE C ++++RS+ G EF+N E D GI H+ + QQNGV+ER
Sbjct: 789 LFKKFAKRAQNEFSCTLVKIRSNIGSEFKNTNIEDYCDDLGIKHELFATYSPQQNGVVER 848
Query: 864 KNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNFSY 923
KNRTL EMARTML E ++ FWAEA+NT C+ NR+ + +L KT YE+ KPN +Y
Sbjct: 849 KNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRVLKKTSYEVIVGRKPNIAY 908
Query: 924 FHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFDDK 983
F FGC CY RL KF+S+ + LLGY+ +SK +R+YN + +EE V+FD+
Sbjct: 909 FRVFGCKCYIHRKGVRLTKFESRCDEGFLLGYASKSKAYRVYNKNKGIVEETADVQFDET 968
Query: 984 LDSDQSK----------LVEKFADMSIN------VSDKGKAPEEAEPEEDSLE-----EV 1022
S + L+ +MSI V DK + EP ++ EV
Sbjct: 969 NGSQEGHENLDDVGDEGLMRVMKNMSIGDVKPIEVEDKPSTSTQDEPSTSAMPSQAQVEV 1028
Query: 1023 GLSDSQ-----PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEP 1077
+Q P+ + + HP + +LG + V TRS ++ VS +E
Sbjct: 1029 EEEKAQEPPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVT----SICEHYSFVSCLER 1084
Query: 1078 KSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRN 1137
K +DEAL D DW+ M EEL F++N VW LV++P+ +++GTKWVFRNK +E G VVRN
Sbjct: 1085 KHVDEALCDPDWMNAMHEELKNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVVRN 1144
Query: 1138 KARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISE 1197
KARLVAQG +Q EG+D+ ETFA VARLEAI +L++F+ +I + QMDVKSAFLN
Sbjct: 1145 KARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASCFDIKLFQMDVKSAFLN----- 1199
Query: 1198 EVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFC 1257
D K P+HV+KL K+LYGL+QAPRAWY RL FLL +F GKVD TLF
Sbjct: 1200 -----------DTKYPNHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFT 1248
Query: 1258 KTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEA 1317
K DD + QIYVDDIIFGS N CKEF +MM E EMS +GEL +FLG+Q+ Q
Sbjct: 1249 KIIGDDFFVYQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNG 1308
Query: 1318 TYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTA 1377
T++ Q+KY K+LLK+F ++ + KTPM L+ ++ V K+YR MIGSLLYLT
Sbjct: 1309 TFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTV 1368
Query: 1378 SRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADY 1437
SRPDI+FSV +CARFQ+ P+E HL AVKRI RYLK ++ +GL Y K +++KL GY D DY
Sbjct: 1369 SRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDY 1428
Query: 1438 AGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLED 1497
AG + +RKSTS +CQ LG +LVSW+SK+Q+ +ALS AE EY+SA C Q+LW K L D
Sbjct: 1429 AGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQTLLD 1488
Query: 1498 YQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQW 1557
Y I + P+ CDN AI ++ NP+ HSR KHI++++HF+RD+V K +++ + T+ Q
Sbjct: 1489 YGISFTKTPLLCDNDGAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQL 1548
Query: 1558 ANIFTKPLADDRFNFILKNLNM 1579
A+IFTKPL + RF + LN+
Sbjct: 1549 ADIFTKPLDETRFCKLRNELNI 1570
>ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28269414|gb|AAO37957.1| putative gag-pol polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1969
Score = 882 bits (2278), Expect = 0.0
Identities = 473/1048 (45%), Positives = 644/1048 (61%), Gaps = 45/1048 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGE-VGFGGNEKGKIVGSGTIGVDNSPCIDN 626
+ SW +DSGCSRHMTGE + F L G E + FG G+++ GTI V++ + +
Sbjct: 750 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 809
Query: 627 VLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELE 686
V LV L +NLLS+SQL D+ ++ F + R + S +F+ R +
Sbjct: 810 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLD-ASESPVFDISRVGRVFFANFDSSA 868
Query: 687 TQKVKCLL-SVNEEQWVWHRRLGH------ASMSKLDLVRGLPTLKFSSDALCEACQKGK 739
+CL+ S N + + WHRRLGH + +S +DL+RGLP LK D +C C+ GK
Sbjct: 869 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDLVCAPCRHGK 928
Query: 740 FTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKD 799
T K +V T P +LLH+D G + +S+GGK Y +V+VDD+S ++WV FL K+
Sbjct: 929 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 988
Query: 800 ESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNG 859
E+ F + + E + +RSD+G EF+N FES DS G+ H FS P QQNG
Sbjct: 989 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1048
Query: 860 VIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKP 919
V+ERKNRTL EMARTML E + FW EA++ C+I NR+ +R IL+KTPYEL +P
Sbjct: 1049 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1108
Query: 920 NFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVR 979
S+ FGC C+ L + + L KF+S+S + LGY+ S+ +R+Y I E V
Sbjct: 1109 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1167
Query: 980 FDDKL---------------------DSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDS 1018
FD+ D D + D + V + G +P P D+
Sbjct: 1168 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1226
Query: 1019 -------LEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGL 1071
EE+ S P I HP + ++G E V ++ L
Sbjct: 1227 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAF 1280
Query: 1072 VSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEK 1131
V+ EPK++ AL D++W+ M EEL F +N VW+LV+ P G +++GTKWVF+NKL E
Sbjct: 1281 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1340
Query: 1132 GDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFL 1191
G +VRNKARLVAQG +Q EG+D+ ETFA VARLEAIR+L++F+ + + QMDVKSAFL
Sbjct: 1341 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1400
Query: 1192 NGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKV 1251
NG I EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWY RL +FLL N F G V
Sbjct: 1401 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1460
Query: 1252 DTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQV 1311
D TLF D + QIYVDDIIFG ++ +L +FS++M E EMS MGEL +FLG+Q+
Sbjct: 1461 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1520
Query: 1312 DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGS 1371
Q E ++HQ+KY+KELLKKF+M TPM T L ++ +V Q+ YR MIGS
Sbjct: 1521 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1580
Query: 1372 LLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSG 1431
LLYLTASRPDI FSV LCARFQ+ PR +H AVKRI RY+K T G+ Y +S +
Sbjct: 1581 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRA 1640
Query: 1432 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWT 1491
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS +A S AEAEY++AA +Q+LW
Sbjct: 1641 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1700
Query: 1492 KHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFV 1551
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V KG ++L+FV
Sbjct: 1701 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1760
Query: 1552 DTDHQWANIFTKPLADDRFNFILKNLNM 1579
+++ Q A+IFTKPL RF F+ L +
Sbjct: 1761 ESEKQLADIFTKPLDRSRFEFLRSELGV 1788
>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 882 bits (2278), Expect = 0.0
Identities = 473/1037 (45%), Positives = 654/1037 (62%), Gaps = 39/1037 (3%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNSPCIDNVLLVD 631
WY DSG SRHMTG + V FGG KG+I G G + P + NV V+
Sbjct: 614 WYFDSGASRHMTGSQANLNNYSSVKESNVMFGGGAKGRIKGKGDLTETEKPHLTNVYFVE 673
Query: 632 GLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELETQKVK 691
GL NL+S+SQL D+G + FN+ C A + + + L + NN Y E K+
Sbjct: 674 GLTANLISVSQLCDEGLTVSFNKVKCWATNERNQNTLTGVRTGNNCYM-----WEEPKI- 727
Query: 692 CLLSVNEEQWVWHRRLGHA---SMSKL---DLVRGLPTLKFSSDALCEACQKGKFTKVPF 745
CL + E+ +WH+RLGH SMSKL ++VRG+P LK +C AC +GK +V
Sbjct: 728 CLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELKHIEKIVCGACNQGKQIRVQH 787
Query: 746 KAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESHSVF 805
K + T++ L+L+H+DL G ++TESI GKRY V+VDD+S + WV+F+ K E+ + F
Sbjct: 788 KRVEGIQTTQVLDLIHMDLMGPMQTESIAGKRYVFVLVDDFSRYAWVRFIREKSETANSF 847
Query: 806 STFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIERKN 865
Q++NEK I ++RSD GGEF N+ F S +S GI H +S PRT Q NGV+ERKN
Sbjct: 848 KILALQLKNEKKMGIKQIRSDRGGEFMNEAFNSFCESQGIFHQYSAPRTPQSNGVVERKN 907
Query: 866 RTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNFSYFH 925
RTLQEMAR M+ + + FWAEA++T CY+ NR+ +R +KTPYE+WK KPN SYF
Sbjct: 908 RTLQEMARAMIHGNGVPEKFWAEAISTACYVINRVYVRLGSDKTPYEIWKGKKPNLSYFR 967
Query: 926 PFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFDDKLD 985
FGCVCY +N+KD+L KFDS+S + LGY+ S +R++N IEE ++V FDD
Sbjct: 968 VFGCVCYIMNDKDQLGKFDSRSEEGFFLGYATNSLAYRVWNKQRGKIEESMNVVFDDGSM 1027
Query: 986 SDQSKLV---------------EKFADMSINVSDKGKAPEEAEPE-------EDSLEEVG 1023
+ +V E+ D + D K+ EE++ E D +
Sbjct: 1028 PELQIIVRNRNEPQTSISNNHGEERNDNQFDNGDINKSGEESDEEVPPAQVHRDHASKDI 1087
Query: 1024 LSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEA 1083
+ D ++ +R V ++L GIK + ++F EE + S VS++EPK++ EA
Sbjct: 1088 IGDPSGERVTRGVKQDYRQLA-GIKQKHR-VMASFACFEEIMFSC--FVSIVEPKNVKEA 1143
Query: 1084 LQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVA 1143
L+D WIL MEEEL +FS++ VW+LV +P V+++GTKW+F+NK +E G++ RNKARLVA
Sbjct: 1144 LEDHFWILAMEEELEEFSRHQVWDLVPRPPQVNVIGTKWIFKNKFDEVGNITRNKARLVA 1203
Query: 1144 QGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQ 1203
QG +Q EG+D+ ETFA VARLE IR L+ + +HQMDVK AFLNG I EEVYV Q
Sbjct: 1204 QGYTQVEGLDFDETFAPVARLECIRFLLGTACGMGFKLHQMDVKCAFLNGIIEEEVYVEQ 1263
Query: 1204 PPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDD 1263
P GFE+ + P++V+KLKK+LYGLKQAPRAWY RL++FL+ + RG VD TLF K
Sbjct: 1264 PKGFENLEFPEYVYKLKKALYGLKQAPRAWYERLTTFLIVQGYTRGSVDKTLFVKNDVHG 1323
Query: 1264 I*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQS 1323
I I QIYVDDI+FG + L K F + M E MS +GELKYFLG+Q++Q E I QS
Sbjct: 1324 IIIIQIYVDDIVFGGTSDKLVKTFVKTMTTEFRMSMVGELKYFLGLQINQTDEGITISQS 1383
Query: 1324 KYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDIL 1383
Y + L+K+F M S A TPM T L K++ KV +K+YRGMIGSLLYLTA+RPD+
Sbjct: 1384 TYAQNLVKRFGMCSSKPAPTPMSTTTKLFKDEKGVKVDEKLYRGMIGSLLYLTATRPDLC 1443
Query: 1384 FSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTE 1443
SV LCAR+QS+P+ +HL AVKRI +Y+ GT N GL Y + + L GYCDAD+ G+ +
Sbjct: 1444 LSVGLCARYQSNPKASHLLAVKRIIKYVSGTINYGLNYTRDTSLVLVGYCDADWGGNLDD 1503
Query: 1444 RKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDY-QILE 1502
R+ST+G FLGSNL+SW SK+Q+ ++LS ++EYI+ C TQ+LW + DY
Sbjct: 1504 RRSTTGGVFFLGSNLISWHSKKQNCVSLSSTQSEYIALGSCCTQLLWMRQMGLDYGMTFP 1563
Query: 1503 SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFT 1562
+ + CDN +AI++SKNP+ HS KHI +++HF+R+ V + + ++ V T+ Q +IFT
Sbjct: 1564 DPLLVKCDNESAIAISKNPVQHSVTKHIAIRHHFVRELVEEKQITVEHVPTEIQLVDIFT 1623
Query: 1563 KPLADDRFNFILKNLNM 1579
KPL + F + K+L +
Sbjct: 1624 KPLDLNTFVNLQKSLGI 1640
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902378|ref|NP_912535.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2145
Score = 878 bits (2268), Expect = 0.0
Identities = 471/1048 (44%), Positives = 643/1048 (60%), Gaps = 45/1048 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGE-VGFGGNEKGKIVGSGTIGVDNSPCIDN 626
+ SW +DSGCSRHMTGE + F L E + FG G+++ GTI V++ + +
Sbjct: 750 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 809
Query: 627 VLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELE 686
V LV L +NLLS+SQL D+ ++ F + R + S +F+ R +
Sbjct: 810 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLD-ASESPVFDISRVGRVFFANFDSSA 868
Query: 687 TQKVKCLL-SVNEEQWVWHRRLGH------ASMSKLDLVRGLPTLKFSSDALCEACQKGK 739
+CL+ S N + + WHRRLGH + +S +DL+RGLP LK D +C C+ GK
Sbjct: 869 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 928
Query: 740 FTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKD 799
T K +V T P +LLH+D G + +S+GGK Y +V+VDD+S ++WV FL K+
Sbjct: 929 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 988
Query: 800 ESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNG 859
E+ F + + E + +RSD+G EF+N FES DS G+ H FS P QQNG
Sbjct: 989 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1048
Query: 860 VIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKP 919
V+ERKNRTL EMARTML E + FW EA++ C+I NR+ +R IL+KTPYEL +P
Sbjct: 1049 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1108
Query: 920 NFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVR 979
S+ FGC C+ L + + L KF+S+S + LGY+ S+ +R+Y I E V
Sbjct: 1109 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1167
Query: 980 FDDKL---------------------DSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDS 1018
FD+ D D + D + V + G +P P D+
Sbjct: 1168 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1226
Query: 1019 -------LEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGL 1071
EE+ S P I HP + ++G E V ++ L
Sbjct: 1227 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAF 1280
Query: 1072 VSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEK 1131
V+ EPK++ AL D++W+ M EEL F +N VW+LV+ P G +++GTKWVF+NKL E
Sbjct: 1281 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1340
Query: 1132 GDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFL 1191
G +VRNKARLVAQG +Q EG+D+ ETFA VARLEAIR+L++F+ + + QMDVKSAFL
Sbjct: 1341 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1400
Query: 1192 NGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKV 1251
NG I EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWY RL +FLL N F G V
Sbjct: 1401 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1460
Query: 1252 DTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQV 1311
D TLF D + QIYVDDIIFG ++ +L +FS++M E EMS MGEL +FLG+Q+
Sbjct: 1461 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1520
Query: 1312 DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGS 1371
Q E ++HQ+KY+KELLKKF+M TPM T L ++ +V Q+ YR MIGS
Sbjct: 1521 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1580
Query: 1372 LLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSG 1431
LLYLTASRPDI FSV LCARFQ+ PR +H AVKR+ RY+K T G+ Y +S +
Sbjct: 1581 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRA 1640
Query: 1432 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWT 1491
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS +A S AEAEY++AA +Q+LW
Sbjct: 1641 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1700
Query: 1492 KHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFV 1551
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V KG ++L+FV
Sbjct: 1701 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1760
Query: 1552 DTDHQWANIFTKPLADDRFNFILKNLNM 1579
+++ Q A+IFTKPL RF F+ L +
Sbjct: 1761 ESEKQLADIFTKPLDRSRFEFLRSELGV 1788
>ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultivar-group)]
gi|32488723|emb|CAE03600.1| OSJNBb0004A17.2 [Oryza sativa
(japonica cultivar-group)]
Length = 1877
Score = 878 bits (2268), Expect = 0.0
Identities = 471/1048 (44%), Positives = 643/1048 (60%), Gaps = 45/1048 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGE-VGFGGNEKGKIVGSGTIGVDNSPCIDN 626
+ SW +DSGCSRHMTGE + F L E + FG G+++ GTI V++ + +
Sbjct: 832 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 891
Query: 627 VLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELE 686
V LV L +NLLS+SQL D+ ++ F + R + S +F+ R +
Sbjct: 892 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLD-ASESPVFDISRVGRVFFANFDSSA 950
Query: 687 TQKVKCLL-SVNEEQWVWHRRLGH------ASMSKLDLVRGLPTLKFSSDALCEACQKGK 739
+CL+ S N + + WHRRLGH + +S +DL+RGLP LK D +C C+ GK
Sbjct: 951 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 1010
Query: 740 FTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKD 799
T K +V T P +LLH+D G + +S+GGK Y +V+VDD+S ++WV FL K+
Sbjct: 1011 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 1070
Query: 800 ESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNG 859
E+ F + + E + +RSD+G EF+N FES DS G+ H FS P QQNG
Sbjct: 1071 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1130
Query: 860 VIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKP 919
V+ERKNRTL EMARTML E + FW EA++ C+I NR+ +R IL+KTPYEL +P
Sbjct: 1131 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1190
Query: 920 NFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVR 979
S+ FGC C+ L + + L KF+S+S + LGY+ S+ +R+Y I E V
Sbjct: 1191 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1249
Query: 980 FDDKL---------------------DSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDS 1018
FD+ D D + D + V + G +P P D+
Sbjct: 1250 FDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 1308
Query: 1019 -------LEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGL 1071
EE+ S P I HP + ++G E V ++ L
Sbjct: 1309 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYE------LVNSAF 1362
Query: 1072 VSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEK 1131
V+ EPK++ AL D++W+ M EEL F +N VW+LV+ P G +++GTKWVF+NKL E
Sbjct: 1363 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 1422
Query: 1132 GDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFL 1191
G +VRNKARLVAQG +Q EG+D+ ETFA VARLEAIR+L++F+ + + QMDVKSAFL
Sbjct: 1423 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1482
Query: 1192 NGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKV 1251
NG I EEVYV QPPGFE+ K P+HVFKL+K+LYGLKQAPRAWY RL +FLL N F G V
Sbjct: 1483 NGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1542
Query: 1252 DTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQV 1311
D TLF D + QIYVDDIIFG ++ +L +FS++M E EMS MGEL +FLG+Q+
Sbjct: 1543 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1602
Query: 1312 DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGS 1371
Q E ++HQ+KY+KELLKKF+M TPM T L ++ +V Q+ YR MIGS
Sbjct: 1603 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1662
Query: 1372 LLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSG 1431
LLYLTASRPDI FSV LCARFQ+ PR +H AVKR+ RY+K T G+ Y +S +
Sbjct: 1663 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRA 1722
Query: 1432 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWT 1491
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS +A S AEAEY++AA +Q+LW
Sbjct: 1723 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1782
Query: 1492 KHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFV 1551
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V KG ++L+FV
Sbjct: 1783 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1842
Query: 1552 DTDHQWANIFTKPLADDRFNFILKNLNM 1579
+++ Q A+IFTKPL RF F+ L +
Sbjct: 1843 ESEKQLADIFTKPLDRSRFEFLRSELGV 1870
>ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 877 bits (2266), Expect = 0.0
Identities = 472/1048 (45%), Positives = 643/1048 (61%), Gaps = 45/1048 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGE-VGFGGNEKGKIVGSGTIGVDNSPCIDN 626
+ SW +DSGCSRHMTGE + F L G E + FG G+++ GTI V++ + +
Sbjct: 365 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 424
Query: 627 VLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELE 686
V LV L +NLLS+SQL D+ ++ F + R + S +F+ R +
Sbjct: 425 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLD-ASESPVFDISRVGRVFFANFDSSA 483
Query: 687 TQKVKCLL-SVNEEQWVWHRRLGH------ASMSKLDLVRGLPTLKFSSDALCEACQKGK 739
+CL+ S N + + WHRRLGH + +S +DL+RGLP LK D +C C+ GK
Sbjct: 484 PGPSRCLVASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKAPKDLVCAPCRHGK 543
Query: 740 FTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKD 799
T K +V T P +LLH++ G + +S+GGK Y +V+VDD+S ++WV FL K+
Sbjct: 544 MTSSSHKPVTMVMTDGPGQLLHMNTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 603
Query: 800 ESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNG 859
E+ F + + E + +RSD+G EF+N FES DS G+ H FS P QQNG
Sbjct: 604 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 663
Query: 860 VIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKP 919
V+ERKNRTL EMARTML E + FW EA++ C+I NR+ +R IL+KTPYEL +P
Sbjct: 664 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 723
Query: 920 NFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVR 979
S+ FGC C+ L + + L KF+S+S + LGY+ S+ +R+Y I E V
Sbjct: 724 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 782
Query: 980 FDDKL---------------------DSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDS 1018
FD+ D D + D + V + G +P P D+
Sbjct: 783 FDEASPGARPEISGVLDESIFVDEDSDDDDDDSIPPPLDSTPPVQETG-SPSTTSPSGDA 841
Query: 1019 -------LEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGL 1071
EE+ S P I HP + ++G E V ++ L
Sbjct: 842 PTTSSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYD------LVNSAF 895
Query: 1072 VSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEK 1131
V+ EPK++ AL D++W+ M EEL F +N VW+LV+ P G +++GTKWVF+NKL E
Sbjct: 896 VASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGED 955
Query: 1132 GDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFL 1191
G +VRNKARLVAQG +Q EG+D+ ETFA VARLEAIR+L++F+ + + QMDVKSAFL
Sbjct: 956 GSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFL 1015
Query: 1192 NGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKV 1251
NG I EEVYV QPPGFE+ K P+HVFKL K+LYGLKQAPRAWY RL +FLL N F G V
Sbjct: 1016 NGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAV 1075
Query: 1252 DTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQV 1311
D TLF D + QIYVDDIIFG ++ +L +FS++M E EMS MGEL +FLG+Q+
Sbjct: 1076 DKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQI 1135
Query: 1312 DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGS 1371
Q E ++HQ+KY+KELLKKF+M TPM T L ++ +V Q+ YR MIGS
Sbjct: 1136 KQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGS 1195
Query: 1372 LLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSG 1431
LLYLTASRPDI FSV LCARFQ+ PR +H AVKRI RY+K T G+ Y +S +
Sbjct: 1196 LLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRA 1255
Query: 1432 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWT 1491
+ DAD+AG + +RKSTSG C FLG++LVSW+S++QS +A S AEAEY++AA +Q+LW
Sbjct: 1256 FSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWM 1315
Query: 1492 KHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFV 1551
L+DY + S +P+ CDNT+AI+++KNP+ HSR KHIE++YHF+RD V KG ++L+FV
Sbjct: 1316 ISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFV 1375
Query: 1552 DTDHQWANIFTKPLADDRFNFILKNLNM 1579
+++ Q A+IFTKPL RF F+ L +
Sbjct: 1376 ESEKQLADIFTKPLDRSRFEFLRSELGV 1403
>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa (japonica cultivar-group)]
gi|50923031|ref|XP_471876.1| OSJNBa0063G07.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1539
Score = 870 bits (2248), Expect = 0.0
Identities = 477/1044 (45%), Positives = 634/1044 (60%), Gaps = 71/1044 (6%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGG----EVGFGGNEKGKIVGSGTIGVDNSPCIDNV 627
W LDSGC++HMTG+R MF ++ GG +V F N K K++G G I + N IDNV
Sbjct: 524 WVLDSGCTQHMTGDRAMFTTFEV--GGNEQEKVTFVDNSKRKVIGLGKIAISNDLSIDNV 581
Query: 628 LLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELET 687
V LN NLLS++Q+ D G F + S +D S +F R N Y + + E
Sbjct: 582 SFVKSLNFNLLSVAQICDLGLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYFVDFNSSEA 641
Query: 688 QKVKCLLSVNEEQWVWHRRLGHASM------SKLDLVRGLPTLKFSSDALCEACQKGKFT 741
CL++ W+WHRRL H M SK DLV GL +KF D LC ACQ GK
Sbjct: 642 NLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQV 701
Query: 742 KVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDES 801
K+++STSRPLELLH+DLFG +SIGG + +VIVDDYS +TWV FL K
Sbjct: 702 ACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIV 761
Query: 802 HSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVI 861
+F + QNE C ++++RSD+G EF+N E D GI H+ S + QQNGV+
Sbjct: 762 AELFKKIAKRAQNEFSCTLVKIRSDNGSEFKNTNIEDYCDDLGIKHELSATYSPQQNGVV 821
Query: 862 ERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNF 921
ERKNRTL EMARTML E ++ FWAEA+NT C+ NR + +L T YEL KPN
Sbjct: 822 ERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRFYLHRLLKNTSYELIVGRKPNV 881
Query: 922 SYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFD 981
+YF FGC CY RL KF+S+ + LLGY+ SK +R+YN + T+EE V+FD
Sbjct: 882 AYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGTVEETADVQFD 941
Query: 982 DKLDSDQSK----------LVEKFADMS------INVSDKGKAPEEAEPE--------ED 1017
+ S + L+ +MS I V DK + EP +
Sbjct: 942 ETNGSQEGHENLDDVGDEGLIRAMKNMSFGDVKPIEVEDKPSTSTQDEPSTFATPSQAQV 1001
Query: 1018 SLEEVGLSDS--QPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLI 1075
+EE D P+ + + HP + +LG + V T S ++ VS +
Sbjct: 1002 EVEEEKAQDPPIPPRIHTTLSKDHPIDQVLGDISKGVQTLSRV----ASICEHYSFVSCL 1057
Query: 1076 EPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVV 1135
EPK +DEAL D DW+ M EELN F++N VW LV++P+ +++GTKWVFRNK +E G VV
Sbjct: 1058 EPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVV 1117
Query: 1136 RNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYI 1195
RNKARLVAQG +Q EG+D+ ETFA VARLEAI +L++F+ +I + QMDVKSAFLNG I
Sbjct: 1118 RNKARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASWFDIKLFQMDVKSAFLNGEI 1177
Query: 1196 SEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTL 1255
+E V+V QPPGFED K P+H FK+ GKVDTTL
Sbjct: 1178 AELVFVEQPPGFEDPKYPNHDFKI-----------------------------GKVDTTL 1208
Query: 1256 FCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKP 1315
F K DD + QIYVDDIIFGS N CKEF +MM E EMS +GEL +FLG+Q+ Q
Sbjct: 1209 FTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLK 1268
Query: 1316 EATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYL 1375
+ T++ Q+KY K+LLK+F ++ + KTPM L+ ++ V K+YR MIGSLLYL
Sbjct: 1269 DGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYL 1328
Query: 1376 TASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDA 1435
TASRPDI+FSV +CA FQ+ P+E HL AVKRI RYLK ++ +GL Y K +++KL GY D+
Sbjct: 1329 TASRPDIMFSVCMCAWFQAAPKECHLVAVKRILRYLKYSSTIGLWYPKGAKFKLVGYSDS 1388
Query: 1436 DYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQL 1495
DYAG + +R STSG+CQ LG +LVSW+SK+Q+ +ALS AEAEY+SA C Q+LW K L
Sbjct: 1389 DYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTL 1448
Query: 1496 EDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDH 1555
DY I + P+ CDN +AI ++ NP+ HSR KHI++++HF+RD+V K +++ + T+
Sbjct: 1449 LDYGISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTED 1508
Query: 1556 QWANIFTKPLADDRFNFILKNLNM 1579
Q A+IFTKPL + RF + LN+
Sbjct: 1509 QLADIFTKPLDETRFCKLRNELNV 1532
>gb|AAP53706.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37534234|ref|NP_921419.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1419
Score = 861 bits (2225), Expect = 0.0
Identities = 462/1036 (44%), Positives = 644/1036 (61%), Gaps = 41/1036 (3%)
Query: 552 ERIRLSILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGE-VGFGGNEKGKI 610
++ ++ +L+++L+A K W +DSG SRHMTG++ F LK E + F +
Sbjct: 410 DQSKVLVLEVALVAR-KENVWIVDSGDSRHMTGDKNWFSSLKKASKTESIVFADASTSAV 468
Query: 611 VGSGTIGVDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFN 670
V +G + V+ + NV LV L +NLLS+SQ+ D+ +++ F + + SVL N
Sbjct: 469 VATGLVKVNEKFELKNVALVKDLKYNLLSVSQIVDENFEVHFKKTGSKVFDSCGDSVL-N 527
Query: 671 SKRRNNTYKIRLSELETQKVKCLLS-VNEEQWVWHRRLGHAS------MSKLDLVRGLPT 723
R +K + + CL++ +++ WHRRLGH +S LDLVRGL
Sbjct: 528 ISRYERVFKADFENSVSLVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLSK 587
Query: 724 LKFSSDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIV 783
LK D +C C+ K V T P +LLH+D G + +S+GGK Y +VIV
Sbjct: 588 LKKDLDLICTPCRHAKMVSTSHAPIVSVMTDAPGQLLHMDTVGPARVQSVGGKWYVLVIV 647
Query: 784 DDYSCWTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSY 843
DD+S ++WV F++ KDE+ F +++ E + R+RSD+GGEF+N FE +
Sbjct: 648 DDFSRYSWVFFMTTKDEAFQHFRGLFLRLELEFPGSLKRIRSDNGGEFKNASFEQFCNER 707
Query: 844 GIAHDFSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIR 903
G+ H+FS PR QQN V+ERKNR L EMARTML E + FWAEA+NT CYI NR+ +R
Sbjct: 708 GLEHEFSSPRVPQQNSVVERKNRVLVEMARTMLDEYKTTRKFWAEAINTACYISNRVFLR 767
Query: 904 PILNKTPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFR 963
L KT YEL +P S+ FGC C+ L + + L KF+++S+ L LGY ++G+R
Sbjct: 768 SKLGKTSYELRFGHQPKVSHLRVFGCKCFVLKSGN-LDKFEARSTDGLFLGYPAHTRGYR 826
Query: 964 IYNTDAKTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVG 1023
+ I E V FD+ + + + + + G+ E+ E + D +EVG
Sbjct: 827 VLILGTNKIVETCEVSFDEASPGTRPDIAGTLSQVQ---GEDGRIFED-ESDYDDDDEVG 882
Query: 1024 LSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEA 1083
+ + + V +H V SAF V+ EPK + A
Sbjct: 883 SAGERTTRSK--VTTHD-----------VCANSAF-------------VASFEPKDVSHA 916
Query: 1084 LQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVA 1143
L D+ WI M EEL F +N VW LV+ P G +++GTKWVF+NK NE G +VRNKARLVA
Sbjct: 917 LTDESWINAMHEELENFERNKVWTLVEPPSGHNVIGTKWVFKNKQNEDGLIVRNKARLVA 976
Query: 1144 QGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQ 1203
QG +Q EG+D+ ETFA VAR+EAIRLL++F+ + ++QMDVKSAFLNG+I EEVYV Q
Sbjct: 977 QGFTQVEGLDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQ 1036
Query: 1204 PPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDD 1263
PPGFE+ P+HVFKL K+LYGLKQAPRAWY RL +FLL F GKVD TLF + D+
Sbjct: 1037 PPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDN 1096
Query: 1264 I*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQS 1323
QIYVDDIIFG + ++ +F+E M+ E EMS MGEL YFLG+Q+ Q P+ T++HQ+
Sbjct: 1097 QLFVQIYVDDIIFGCSTHAVVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQT 1156
Query: 1324 KYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDIL 1383
KYTK+LL++F M+ TP+ T +L+ ++ V QK YR MIGSLLYLTASRPDI
Sbjct: 1157 KYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQKEYRSMIGSLLYLTASRPDIQ 1216
Query: 1384 FSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTE 1443
F+V LCARFQ+ PR +H AVKRI RYL T G+ Y +S LSGY DAD+ G R +
Sbjct: 1217 FAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIWYSTSSSICLSGYSDADFGGCRID 1276
Query: 1444 RKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILES 1503
RKSTSG C FLG++L++W+S++QS +A S AE+EY++AA C +Q+LW L+DY I
Sbjct: 1277 RKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYGITFE 1336
Query: 1504 NIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTK 1563
+P++CDNT+AI+++KNP+ HSR KHI++++HF+RD+V KG + L+F+DT Q A+IFTK
Sbjct: 1337 KVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTK 1396
Query: 1564 PLADDRFNFILKNLNM 1579
PL +RF F+ L +
Sbjct: 1397 PLDSNRFAFLRGELGV 1412
>ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28209450|gb|AAO37468.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1128
Score = 829 bits (2141), Expect = 0.0
Identities = 444/935 (47%), Positives = 593/935 (62%), Gaps = 38/935 (4%)
Query: 679 KIRLSELETQKVKCLLSVNEEQWVWHRRLGHASM------SKLDLVRGLPTLKFSSDALC 732
K+ + + V L++ W+WHRRL H M SK DLV GL +KF D LC
Sbjct: 191 KVTFGDNSKRNVIGLVAKTSFGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLC 250
Query: 733 EACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWV 792
ACQ K K+++STSRPLELLH+DLFG +SIGG + +VIVDDYSC+TWV
Sbjct: 251 SACQASKQVACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIVDDYSCYTWV 310
Query: 793 KFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCP 852
FL K +F F + QNE C ++++RSD+G +F+N E D I H+ S
Sbjct: 311 FFLHDKCIVAELFKKFAKRAQNEFSCTLVKIRSDNGSKFKNTNIEDYCDDLSIKHELSAT 370
Query: 853 RTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYE 912
+ QQNGV+ERKNRTL EMARTML E ++ FWAEA+NT C+ NR+ + +L KT YE
Sbjct: 371 YSPQQNGVVERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYE 430
Query: 913 LWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTI 972
L KPN +YF FGC CY RL KF+S+ + LLGY+ SK +R+YN + +
Sbjct: 431 LIVGRKPNVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIV 490
Query: 973 EECIHVRFDDKLDSDQSK----------LVEKFADMSIN------VSDKGKAPEEAEPEE 1016
EE V+FD+ S + L+ +MSI V DK + EP
Sbjct: 491 EETADVQFDETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPST 550
Query: 1017 DSLE-----EVGLSDSQ-----PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLL 1066
+ EV +Q P+ + + HP + +LG + V TRS ++
Sbjct: 551 SASPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVLGDISKGVQTRSPVA----SIC 606
Query: 1067 SLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRN 1126
VS +EPK +DEAL D DW+ + EELN F++N VW LV++P+ +++GTKWVFRN
Sbjct: 607 EHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVERPRDHNVIGTKWVFRN 666
Query: 1127 KLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDV 1186
K +E VVRNKARLVAQG +Q E +D+ ETF VARLEAIR+L++F+ +I + QMDV
Sbjct: 667 KQDENRLVVRNKARLVAQGFTQVEDLDFGETFGPVARLEAIRILLAFASCFDIKLFQMDV 726
Query: 1187 KSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEF 1246
KSAFLNG I+E V+V QPPGF+D K P+HV+KL K+LYGLKQAPRAWY RL FLL +F
Sbjct: 727 KSAFLNGEIAELVFVEQPPGFDDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDF 786
Query: 1247 VRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYF 1306
GKVDTTLF K DD + QIYVDDIIFGS N CKEF +MM E EMS + EL +F
Sbjct: 787 KIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIEELSFF 846
Query: 1307 LGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYR 1366
LG+Q+ Q + T++ Q+KY K+LLK+F ++ + KTPM L+ ++ V K+YR
Sbjct: 847 LGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDLDEGGKPVDLKLYR 906
Query: 1367 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSE 1426
MIGSLLYLTASRPDI+FSV + ARFQ+ P+E HL AVKRI RYLK ++ + L Y K ++
Sbjct: 907 SMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISLWYPKGAK 966
Query: 1427 YKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICST 1486
+KL GY D+DYAG + +RKSTSG+CQ LG +LVSW+SK+Q+ +ALS AEAEYISA C
Sbjct: 967 FKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAGSCCA 1026
Query: 1487 QMLWTKHQLEDYQI--LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KG 1544
Q+LW K L DY I E+ P+ C+N + I ++ NP+ H R KHI++++HF+ D+V K
Sbjct: 1027 QLLWMKQILLDYGISFTETQTPLLCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDHVAKC 1086
Query: 1545 VLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
+++ + T+ Q A+IFTKPL + RF + LN+
Sbjct: 1087 DIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 1121
Score = 38.9 bits (89), Expect = 1.4
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 572 WYLDSGCSRHMTGERRMFQ--ELKLKPGGEVGFGGNEKGKIVG 612
W LDS C++ MTG+R MF E++ K +V FG N K ++G
Sbjct: 162 WVLDSVCTQRMTGDRAMFTTFEVEGKEQEKVTFGDNSKRNVIG 204
>ref|XP_463224.1| putative integrase [Oryza sativa (japonica cultivar-group)]
gi|40737034|gb|AAR89047.1| putative integrase [Oryza
sativa (japonica cultivar-group)]
Length = 1507
Score = 779 bits (2011), Expect = 0.0
Identities = 439/1060 (41%), Positives = 625/1060 (58%), Gaps = 95/1060 (8%)
Query: 552 ERIRLSILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIV 611
++ ++ +L+++L+A K W +DSGC RHMTG ++ ++ +LK
Sbjct: 504 DQSKVLVLEVALVAR-KENVWIVDSGCLRHMTGMVKVNEKFELK---------------- 546
Query: 612 GSGTIGVDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNS 671
NV LV+ LN+NLLS+ Q+ + +++ F + + SVL N
Sbjct: 547 --------------NVALVEDLNYNLLSVLQIVYENFEVHFKKTRSKVFDSCGDSVL-NI 591
Query: 672 KRRNNTYKIRLSELETQKVKCLLS-VNEEQWVWHRRLGHAS------MSKLDLVRGLPTL 724
R +K + + CL++ +++ WHRRLGH +S LDLVRGLP L
Sbjct: 592 SRYGRVFKADFENPVSPVITCLVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLPKL 651
Query: 725 KFSSDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVD 784
K D C C K V T P +LLH+D G + +S+GGK Y +VI+D
Sbjct: 652 KKDLDLDCAPCHHAKMVASSHAPIVSVMTDAPRQLLHMDTVGPARVQSVGGKWYVLVIID 711
Query: 785 DYSCWTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYG 844
D+S ++WV F++ KDE+ F +++ E + R+RSD+G E++N FE + G
Sbjct: 712 DFSRYSWVFFMATKDEAFQHFRGLFLRLELEFPGSLKRIRSDNGSEYKNASFEQFCNERG 771
Query: 845 IAHDFSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRP 904
+ H+FS PR QQNGV+ERKN L EM RTML E + FWAEA+NT YI NR+ +R
Sbjct: 772 LEHEFSSPRVPQQNGVVERKNHVLVEMVRTMLDEYKTPRKFWAEAINTAYYISNRVFLRS 831
Query: 905 ILNKTPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFR- 963
L K+ YEL +P S+ FGC C+ L + + L KF+++S+ L LGY ++G+R
Sbjct: 832 KLGKSSYELRFGHQPKVSHLRVFGCKCFVLKSGN-LDKFEARSTDGLFLGYPAHTRGYRT 890
Query: 964 ---IYNTDAKTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEE--------A 1012
+ D + E+ DD++ S + + A + A EE A
Sbjct: 891 LSQVQGEDGRIFEDESDDNDDDEVGS--AGQTGRQAGQTAGTPPVRPAHEERSDRPGLSA 948
Query: 1013 EPEEDSLEEVGL-------SDSQPQKKSRIVAS------HPKELILGIKDEPV*TRSAFR 1059
E D++ + L +D++ S +VA HP E I+G E TRS +
Sbjct: 949 EGSVDAVRDGPLEITTSTSTDTEHGSTSEVVAPLHIQQRHPPEQIIGNIGERT-TRS--K 1005
Query: 1060 PSEETLLSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILG 1119
+ + + V+ EPK + AL D+ WI M EEL F +N VW LV+ P G +I+G
Sbjct: 1006 VTTHDVCANYAFVASFEPKDVSHALTDESWINAMHEELENFERNKVWTLVEPPSGHNIIG 1065
Query: 1120 TKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNI 1179
TKWVF+NK NE +VRNKARLVAQG +Q EG+D+ ETFA VAR+EAIRL ++F+ +
Sbjct: 1066 TKWVFKNKQNEDDLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLFLAFASSKGF 1125
Query: 1180 IVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSS 1239
++QMDVKSAFLNG+I EEVYV QPPGFE+ P++VFKL K+LYGLKQAPRAWY RL +
Sbjct: 1126 KLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNYVFKLSKALYGLKQAPRAWYDRLKN 1185
Query: 1240 FLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMST 1299
FLL F GKVD TLF L +F+E M+ E EMS
Sbjct: 1186 FLLAKGFTMGKVDKTLFV-------------------------LKHDFAETMRREFEMSM 1220
Query: 1300 MGELKYFLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGK 1359
MGEL YFLG+Q+ Q P+ T++HQ+KYTK+LL++F M+ TP+ T +L+ ++
Sbjct: 1221 MGELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIDSTAVLDPDEDGEA 1280
Query: 1360 VCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGL 1419
V QK YR MIGSLLYLTASRP+I F+V LCARFQ+ PR +H AVKRI RYL T G+
Sbjct: 1281 VDQKEYRSMIGSLLYLTASRPEIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGI 1340
Query: 1420 MYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYI 1479
Y +S LSGY DA++ G R +RKSTSG C FLG++L++W+S++QS +A S AE+EY+
Sbjct: 1341 WYSTSSSLCLSGYSDANFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYV 1400
Query: 1480 SAAICSTQMLWTKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRD 1539
+AA C +Q+LW L++Y + +P++CDNT+AI+++KN + HSR KH+++++HF+RD
Sbjct: 1401 AAASCCSQILWLLSTLKNYGLTFEKVPLFCDNTSAINIAKNLVQHSRTKHVDIRFHFLRD 1460
Query: 1540 YV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
+V KG + L+F+DT Q A+IFTKPL + F F+ L +
Sbjct: 1461 HVEKGDVELQFLDTKLQIADIFTKPLDSNCFTFLCGELGI 1500
>gb|AAP94592.1| retrotransposon Opie-2 [Zea mays]
Length = 1512
Score = 729 bits (1882), Expect = 0.0
Identities = 391/830 (47%), Positives = 523/830 (62%), Gaps = 55/830 (6%)
Query: 750 VVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESHSVFSTFI 809
+V PLELLH+DLFG V SIGG +YG+VIVDD+S +TWV FL K E+ F+
Sbjct: 731 IVFLQIPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRFL 790
Query: 810 AQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIERKNRTLQ 869
+ QNE ++ ++RSD+G EF+N + E + GI H+FS P T QQNGV+ERKNRTL
Sbjct: 791 RRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVERKNRTLI 850
Query: 870 EMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNFSYFHPFGC 929
+MARTML E + FW+EAVNT C+ NR+ + +L KT YEL KPN SYF FG
Sbjct: 851 DMARTMLGEFKTPECFWSEAVNTACHAINRVYLHRLLKKTSYELLTGNKPNVSYFRVFGS 910
Query: 930 VCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFDDKLDSDQS 989
CY L K R KF K+ + LLGY +K +R++N + +E V FD+ S +
Sbjct: 911 KCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSPRE 970
Query: 990 KLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQKKSRIVASHPKELILGIKD 1049
++V D EE P ++ + + + +PQ++ +D
Sbjct: 971 QVV-----------DCDDVDEEDVPTA-AIRTMAIGEVRPQEQDE-------------RD 1005
Query: 1050 EPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLV 1109
+P + + P+++ +P ++EAL D DW+L M+EELN F +N+VW+L
Sbjct: 1006 QPSSSTTVHPPTQDDE----------QPFRVEEALLDLDWVLAMQEELNNFKRNEVWSL- 1054
Query: 1110 KKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRL 1169
+E G V RNKARLVA+G +Q G+D+ ETFA VARLE+IR+
Sbjct: 1055 -------------------DEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRI 1095
Query: 1170 LISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQA 1229
L++++ +H+ ++QMDVKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYGLKQA
Sbjct: 1096 LLAYAAHHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLAKALYGLKQA 1155
Query: 1230 PRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSE 1289
PRAWY L FL+ N F GK D TLF KT D+ + QI+VDDIIFGS N C+EFS
Sbjct: 1156 PRAWYECLRDFLIANAFKVGKADPTLFTKTCNGDLFVCQIFVDDIIFGSTNQKSCEEFSR 1215
Query: 1290 MMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTC 1349
+M + EMS MG+L YFLG QV Q + T+I Q KYT++LLK+F MK + AKTPM
Sbjct: 1216 VMTQKFEMSMMGKLNYFLGFQVKQLKDGTFISQMKYTQDLLKRFGMKDAKPAKTPMGTDG 1275
Query: 1350 ILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRR 1409
+ V QK YR MIGSLLYL ASRPDI+ SV +CARFQS+P+E HL AVKRI R
Sbjct: 1276 HTDLNKGGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSEPKECHLVAVKRILR 1335
Query: 1410 YLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSII 1469
YL T GL Y K S + L GY D+D AG + +RKSTSG CQFLG +LVSW SK+Q+ +
Sbjct: 1336 YLVATPCFGLWYPKGSTFDLVGYSDSDNAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSV 1395
Query: 1470 ALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKH 1529
ALS AEAEY++A C Q+LW + L D+ S +P+ CDN +AI +++NP+ H+R KH
Sbjct: 1396 ALSTAEAEYVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESAIRMAENPVEHNRTKH 1455
Query: 1530 IEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
I++++HF+RD+ KG + + V T++Q A+IFTKPL + F + LN+
Sbjct: 1456 IDIRHHFLRDHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELNV 1505
Score = 40.4 bits (93), Expect = 0.49
Identities = 21/48 (43%), Positives = 30/48 (61%), Gaps = 2/48 (4%)
Query: 571 SWYLDSGCSRHMTGERRMFQE-LKLKPGGE-VGFGGNEKGKIVGSGTI 616
SW +DSGC+ HMTGE++MF +K K + + FG +GK+ TI
Sbjct: 671 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKLSLLATI 718
>gb|AAL66759.1| putative pol protein [Zea mays]
Length = 1657
Score = 727 bits (1877), Expect = 0.0
Identities = 392/822 (47%), Positives = 515/822 (61%), Gaps = 45/822 (5%)
Query: 798 KDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQ 857
K E+ F+ + QNE ++ ++RSD+G EF+N + E + GI H+FS P T QQ
Sbjct: 834 KSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQ 893
Query: 858 NGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKI 917
NGV+ERKNRTL +MARTML E + FW EAVNT C+ NR+ + +L KT YEL
Sbjct: 894 NGVVERKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRLLKKTSYELLTDN 953
Query: 918 KPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIH 977
KPN SYF FG CY L K R KF K+ + LLGY +K +R++N + +E
Sbjct: 954 KPNVSYFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSD 1013
Query: 978 VRFDDKLDSDQSKLVE-----------------KFADMSINVSDKGKAP----------- 1009
V FD+ S + ++V+ ++ D+ P
Sbjct: 1014 VVFDETNGSPREQVVDCDDVDEEDVPTAAIRTMAIGEVRPQEQDERDQPSSSTMVHPPTE 1073
Query: 1010 -EEAEPEEDSLEEVGLSDSQ-----------PQKKSRIVASHPKELILGIKDEPV*TRSA 1057
+E P+ ++L++ G D Q Q ++ I HP + ILG + V TRS
Sbjct: 1074 DDEQVPQVEALDQGGAQDDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSR 1133
Query: 1058 FRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHI 1117
VS IEP ++EAL D DW+L M+EELN F +N+VW LV +P+ ++
Sbjct: 1134 L----VNFCEHYSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPK-QNV 1188
Query: 1118 LGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNH 1177
+GTKWVFRNK +E G V RNKARLVA+G +Q G+D+ ETFA VARLE+IR+L++++ +H
Sbjct: 1189 VGTKWVFRNKQDEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHH 1248
Query: 1178 NIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRL 1237
+ ++QMDVKSAFLNG I EEVYV QPPGFEDE+ PDHV KL K+LYGLKQAPRAWY L
Sbjct: 1249 SFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECL 1308
Query: 1238 SSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEM 1297
FLL N F GK D TLF KT D+ + QIYVDDIIFGS N C+EFS +M + EM
Sbjct: 1309 RDFLLANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEM 1368
Query: 1298 STMGELKYFLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVS 1357
S MGEL YFLG QV Q + T+I Q+KYT++LLK+F MK + AKTPM +
Sbjct: 1369 SMMGELNYFLGFQVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGG 1428
Query: 1358 GKVCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNL 1417
V QK YR MIGSLLYL ASRPDI+ SV +CARFQSDP+E HL AVKRI RYL T
Sbjct: 1429 KSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCF 1488
Query: 1418 GLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAE 1477
GL Y K S + L GY D+DYAG + +RKSTSG CQFLG +LVSW SK+Q+ +ALS AEAE
Sbjct: 1489 GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 1548
Query: 1478 YISAAICSTQMLWTKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1537
Y++A C Q+LW + L D+ S +P+ CDN + I +++NP+ HSR KHI++++HF+
Sbjct: 1549 YVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESDIRMAENPVEHSRTKHIDIRHHFL 1608
Query: 1538 RDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
RD+ KG + + V T++Q A+IFTKPL + F + LN+
Sbjct: 1609 RDHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELNV 1650
Score = 39.3 bits (90), Expect = 1.1
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 571 SWYLDSGCSRHMTGERRMFQE-LKLKPGGE-VGFGGNEKGK 609
SW +DSGC+ HMTGE++MF +K K + + FG +GK
Sbjct: 792 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGK 832
>gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] gi|25301681|pir||F86246
hypothetical protein [imported] - Arabidopsis thaliana
Length = 1352
Score = 715 bits (1845), Expect = 0.0
Identities = 394/1024 (38%), Positives = 573/1024 (55%), Gaps = 43/1024 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGV----DNSPC 623
++ WYLDSG S HM G + MF EL G V G K ++ G G I + +
Sbjct: 331 ENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQF 390
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLS 683
I NV + + N+LS+ QL +KGYDI D ++ + N K+ +S
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLK----------DNNLSIRDQESNLITKVPMS 440
Query: 684 E-------LETQKVKCL-LSVNEEQWVWHRRLGHAS------MSKLDLVRGLPTLKFSSD 729
+ + +CL + EE W+WH R GH + +S+ ++VRGLP + +
Sbjct: 441 KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ 500
Query: 730 ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCW 789
+CE C GK K+ F ++ +PLEL+H D+ G +K +S+G Y ++ +DD+S
Sbjct: 501 -VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 790 TWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDF 849
TWV FL K E +F F A V+ E G I +RSD GGEF + +F + GI
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQL 619
Query: 850 SCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKT 909
+ PR+ QQNGV+ERKNRT+ EMAR+ML+ + K WAEAV Y+ NR + + KT
Sbjct: 620 TVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 910 PYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDA 969
P E W KP S+ FG + +A ++ K D KS K + +GY + SKG+++YN D
Sbjct: 680 PQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 970 KTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEP-EEDSLEEVGLSDSQ 1028
K ++ FD++ + D + E + D+ + E P EE + + SQ
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQ 799
Query: 1029 PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSE-ETLLSLKGLVSLIEPKSIDEALQDK 1087
++ S + + + + +E + L+L L + EP +A++ K
Sbjct: 800 IEESSSERTPRFRSI-----------QELYEVTENQENLTLFCLFAECEPMDFQKAIEKK 848
Query: 1088 DWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNS 1147
W M+EE+ KND W L P G +G KWV++ K N KG+V R KARLVA+G S
Sbjct: 849 TWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYS 908
Query: 1148 QQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGF 1207
Q+ GIDY E FA VARLE +RL+IS + + +HQMDVKSAFLNG + EEVY+ QP G+
Sbjct: 909 QRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 968
Query: 1208 EDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IK 1267
+ D V +LKK LYGLKQAPRAW R+ + + +F++ + L+ K K+DI I
Sbjct: 969 IVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIA 1028
Query: 1268 QIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTK 1327
+YVDD+IF NPS+ +EF + M E EM+ +G + Y+LGI+V Q+ +I Q Y K
Sbjct: 1029 CLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 1328 ELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVH 1387
E+LKKF M S TPM L K++ V ++ ++GSL YLT +RPDIL++V
Sbjct: 1089 EVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1148
Query: 1388 LCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKST 1447
+ +R+ P TH A KRI RY+KGT N GL Y TS+YKL GY D+D+ GD +RKST
Sbjct: 1149 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKST 1208
Query: 1448 SGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQI-LESNIP 1506
SG ++G +W SK+Q I+ LS EAEY++A C +W ++ L++ + E
Sbjct: 1209 SGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTK 1268
Query: 1507 IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLA 1566
I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K + L++V T Q A+ FTKPL
Sbjct: 1269 IFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLK 1328
Query: 1567 DDRF 1570
+ F
Sbjct: 1329 RENF 1332
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.351 0.155 0.541
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,365,528,309
Number of Sequences: 2540612
Number of extensions: 93629244
Number of successful extensions: 398951
Number of sequences better than 10.0: 2542
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 793
Number of HSP's that attempted gapping in prelim test: 390209
Number of HSP's gapped (non-prelim): 4717
length of query: 1583
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1441
effective length of database: 502,593,490
effective search space: 724237219090
effective search space used: 724237219090
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0134.20