BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.16
(212 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO64007.1| unknown protein [Arabidopsis thaliana] gi|2839373... 195 6e-49
gb|AAM65272.1| unknown [Arabidopsis thaliana] 194 1e-48
ref|NP_849593.1| lipid-binding serum glycoprotein family protein... 191 1e-47
gb|AAL60017.1| putative bactericidal permeability-increasing pro... 170 2e-41
ref|NP_851006.1| lipid-binding serum glycoprotein family protein... 170 2e-41
dbj|BAB02808.1| unnamed protein product [Arabidopsis thaliana] 156 3e-37
emb|CAG03233.1| unnamed protein product [Tetraodon nigroviridis] 82 1e-14
dbj|BAC56095.1| bactericidal permeability-increasing protein/lip... 79 9e-14
emb|CAF96904.1| unnamed protein product [Tetraodon nigroviridis] 77 2e-13
dbj|BAB91243.1| LBP (LPS binding protein)/BPI (bactericidal/perm... 75 1e-12
gb|AAM52336.1| bactericidal permeability increasing protein/lipo... 73 5e-12
gb|AAM52335.1| bactericidal permeability increasing protein/lipo... 73 6e-12
dbj|BAB91244.1| LBP (LPS binding protein)/BPI (bactericidal/perm... 71 2e-11
gb|AAH89237.1| MGC108117 protein [Xenopus tropicalis] gi|6275167... 70 4e-11
gb|AAH74326.1| MGC84153 protein [Xenopus laevis] 67 4e-10
ref|XP_589715.1| PREDICTED: similar to lipopolysaccharide-bindin... 63 6e-09
gb|AAH04795.1| Lbp protein [Mus musculus] 60 5e-08
ref|NP_032515.1| lipopolysaccharide-binding protein [Mus musculu... 58 2e-07
emb|CAC10462.1| LBP [Homo sapiens] gi|31652249|ref|NP_004130.2| ... 57 3e-07
gb|AAH22256.1| LBP protein [Homo sapiens] 57 3e-07
>gb|AAO64007.1| unknown protein [Arabidopsis thaliana] gi|28393732|gb|AAO42277.1|
unknown protein [Arabidopsis thaliana]
gi|18390462|ref|NP_563724.1| lipid-binding serum
glycoprotein family protein [Arabidopsis thaliana]
gi|7211993|gb|AAF40464.1| ESTs gb|T76367 and gb|AA404955
come from this gene. [Arabidopsis thaliana]
gi|25406823|pir||C86183 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 488
Score = 195 bits (496), Expect = 6e-49
Identities = 97/200 (48%), Positives = 146/200 (72%), Gaps = 4/200 (2%)
Query: 1 VKGMQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSV 60
V+GM++GL++ LK+ EG LKLSL + GC+V D++I+L+GG +W YQ +V+AF I SSV
Sbjct: 137 VQGMEIGLSLGLKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGMVNAFKDQIGSSV 196
Query: 61 EEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT-- 118
E +++K+ EG++ LD FLQSLPK+IP+D + LNV+F +P+L NSSI I+GLFT
Sbjct: 197 ESTIAKKLTEGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSSITFEIDGLFTKG 256
Query: 119 ERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQ 178
E ++V++S +KK + C G M+ +S+ E V SA+ +Y+NA +Q ++D++P+Q
Sbjct: 257 ETNQVLKS-FFKKSVSL-VICPGNSKMLGISVDEAVFNSAAALYYNADFVQWVVDKIPEQ 314
Query: 179 VILNTAECRFIVPQLYKQYP 198
+LNTA RFI+PQLYK+YP
Sbjct: 315 SLLNTARWRFIIPQLYKKYP 334
>gb|AAM65272.1| unknown [Arabidopsis thaliana]
Length = 488
Score = 194 bits (493), Expect = 1e-48
Identities = 96/200 (48%), Positives = 146/200 (73%), Gaps = 4/200 (2%)
Query: 1 VKGMQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSV 60
V+GM++GL++ LK+ EG LKLSL + GC+V D++I+L+GG +W YQ +V+AF I SSV
Sbjct: 137 VQGMEIGLSLGLKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGMVNAFKDQIGSSV 196
Query: 61 EEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT-- 118
E +++K+ EG++ LD FLQ+LPK+IP+D + LNV+F +P+L NSSI I+GLFT
Sbjct: 197 ESTIAKKLTEGVSDLDSFLQNLPKEIPVDDNADLNVTFTSDPILRNSSITFEIDGLFTKG 256
Query: 119 ERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQ 178
E ++V++S +KK + C G M+ +S+ E V SA+ +Y+NA +Q ++D++P+Q
Sbjct: 257 ETNQVLKS-FFKKSVSL-VICPGNSKMLGISVDEAVFNSAAALYYNADFVQWVVDKIPEQ 314
Query: 179 VILNTAECRFIVPQLYKQYP 198
+LNTA RFI+PQLYK+YP
Sbjct: 315 SLLNTARWRFIIPQLYKKYP 334
>ref|NP_849593.1| lipid-binding serum glycoprotein family protein [Arabidopsis
thaliana]
Length = 349
Score = 191 bits (485), Expect = 1e-47
Identities = 95/197 (48%), Positives = 143/197 (72%), Gaps = 4/197 (2%)
Query: 4 MQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEA 63
M++GL++ LK+ EG LKLSL + GC+V D++I+L+GG +W YQ +V+AF I SSVE
Sbjct: 1 MEIGLSLGLKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGMVNAFKDQIGSSVEST 60
Query: 64 VSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT--ERS 121
+++K+ EG++ LD FLQSLPK+IP+D + LNV+F +P+L NSSI I+GLFT E +
Sbjct: 61 IAKKLTEGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSSITFEIDGLFTKGETN 120
Query: 122 EVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQVIL 181
+V++S +KK + C G M+ +S+ E V SA+ +Y+NA +Q ++D++P+Q +L
Sbjct: 121 QVLKS-FFKKSVSL-VICPGNSKMLGISVDEAVFNSAAALYYNADFVQWVVDKIPEQSLL 178
Query: 182 NTAECRFIVPQLYKQYP 198
NTA RFI+PQLYK+YP
Sbjct: 179 NTARWRFIIPQLYKKYP 195
>gb|AAL60017.1| putative bactericidal permeability-increasing protein precursor
[Arabidopsis thaliana] gi|30685709|ref|NP_188662.3|
lipid-binding serum glycoprotein family protein
[Arabidopsis thaliana]
Length = 515
Score = 170 bits (431), Expect = 2e-41
Identities = 91/199 (45%), Positives = 133/199 (66%), Gaps = 5/199 (2%)
Query: 1 VKGMQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSV 60
VKGM V +T L N G+LK++ + C V ++ I ++GG +WLYQ +VDAF I S+V
Sbjct: 173 VKGMNVRITATLVNDNGSLKIASRENDCTVKNIDIHINGGASWLYQGVVDAFQKMIISTV 232
Query: 61 EEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTER 120
E+ VS KI E + KLD FLQSLPKQ +D ++A+N++F GNPVL NSS+ + INGLF +
Sbjct: 233 EKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGNPVLGNSSVEVDINGLFMPK 292
Query: 121 SEVVESEGYKKGFKISSACGGL-PNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQV 179
+ ++ G + SS GG+ M+ +S+ E V SA+LVYFNA M L+++E +
Sbjct: 293 GDDIKVAGSRS----SSFFGGVNKRMVTISVEEGVFNSATLVYFNAKVMHLVMEETKNGS 348
Query: 180 ILNTAECRFIVPQLYKQYP 198
IL+T++ + I+P+LYK YP
Sbjct: 349 ILSTSDWKLILPELYKHYP 367
>ref|NP_851006.1| lipid-binding serum glycoprotein family protein [Arabidopsis
thaliana]
Length = 722
Score = 170 bits (431), Expect = 2e-41
Identities = 91/199 (45%), Positives = 133/199 (66%), Gaps = 5/199 (2%)
Query: 1 VKGMQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSV 60
VKGM V +T L N G+LK++ + C V ++ I ++GG +WLYQ +VDAF I S+V
Sbjct: 380 VKGMNVRITATLVNDNGSLKIASRENDCTVKNIDIHINGGASWLYQGVVDAFQKMIISTV 439
Query: 61 EEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTER 120
E+ VS KI E + KLD FLQSLPKQ +D ++A+N++F GNPVL NSS+ + INGLF +
Sbjct: 440 EKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGNPVLGNSSVEVDINGLFMPK 499
Query: 121 SEVVESEGYKKGFKISSACGGL-PNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQV 179
+ ++ G + SS GG+ M+ +S+ E V SA+LVYFNA M L+++E +
Sbjct: 500 GDDIKVAGSRS----SSFFGGVNKRMVTISVEEGVFNSATLVYFNAKVMHLVMEETKNGS 555
Query: 180 ILNTAECRFIVPQLYKQYP 198
IL+T++ + I+P+LYK YP
Sbjct: 556 ILSTSDWKLILPELYKHYP 574
>dbj|BAB02808.1| unnamed protein product [Arabidopsis thaliana]
Length = 1424
Score = 156 bits (395), Expect = 3e-37
Identities = 91/224 (40%), Positives = 133/224 (58%), Gaps = 30/224 (13%)
Query: 1 VKGMQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSV 60
VKGM V +T L N G+LK++ + C V ++ I ++GG +WLYQ +VDAF I S+V
Sbjct: 259 VKGMNVRITATLVNDNGSLKIASRENDCTVKNIDIHINGGASWLYQGVVDAFQKMIISTV 318
Query: 61 EEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTER 120
E+ VS KI E + KLD FLQSLPKQ +D ++A+N++F GNPVL NSS+ + INGLF +
Sbjct: 319 EKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGNPVLGNSSVEVDINGLFMPK 378
Query: 121 SEVVESEGYKKGFKISSACGGL-PNMIKVSLHEYVIQSASLVYFN--------------- 164
+ ++ G + SS GG+ M+ +S+ E V SA+LVYFN
Sbjct: 379 GDDIKVAGSRS----SSFFGGVNKRMVTISVEEGVFNSATLVYFNVSSQILIRVWWNKTI 434
Query: 165 ----------AGKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 198
A M L+++E + IL+T++ + I+P+LYK YP
Sbjct: 435 CKLIGLVLIQAKVMHLVMEETKNGSILSTSDWKLILPELYKHYP 478
>emb|CAG03233.1| unnamed protein product [Tetraodon nigroviridis]
Length = 475
Score = 81.6 bits (200), Expect = 1e-14
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 29 YVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPL 88
+VGD+ + +GG +W++Q V G + +EE + + + IAK D L ++ I +
Sbjct: 153 HVGDVHMNFEGGASWIFQPFVHQLAGRLRGEMEEKICPSLEDSIAKFDYHLLAINISIDV 212
Query: 89 DKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGLPN-MIK 147
+K L++S PV+ SS+ + + G E + F ++ P+ M+
Sbjct: 213 NKDLTLDLSLTDEPVVDVSSLNVGLKGAIYSSKTHAEPPFEPQDFTMAEQ----PDFMLS 268
Query: 148 VSLHEYVIQSASLVYFNAGKMQLIIDE--LP--DQVILNTAECRFIVPQLYKQYP 198
+ + EY + SA Y++AG +Q+ I+E +P V LNT+ +PQL + YP
Sbjct: 269 LGVSEYTLNSALYAYYSAGLLQVFINESMVPSYSPVHLNTSSVGAFIPQLPEMYP 323
>dbj|BAC56095.1| bactericidal permeability-increasing
protein/lipopolysaccharide-binding protein [Cyprinus
carpio]
Length = 473
Score = 79.0 bits (193), Expect = 9e-14
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
V + + TV + + + G +S+ + VG +++K GG +WLY L + ++
Sbjct: 127 VSELTISTTVAVMSDDTGHPTVSMTNCAATVGSVNVKFHGGASWLYNLFSSFINKALRNA 186
Query: 60 VEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTE 119
+++ + + + IA ++ L++L +D+ + + S VG+PV+SN+SI + + G F
Sbjct: 187 LQKQICPLVADSIADINPHLKTLNVLAKVDQYAEIEYSMVGSPVISNTSIDLGLKGEFYN 246
Query: 120 RSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLII--DELP- 176
+ E F + S +M+ + + + I SA VY AG + L I D +P
Sbjct: 247 IGQHKEPPFSPTPFSLPSQD---TDMLYIGVSAFTINSAGFVYNRAGALSLYITDDMIPS 303
Query: 177 -DQVILNTAECRFIVPQLYKQYP 198
+ LNT +PQ+ K YP
Sbjct: 304 GSPIRLNTKTFGAFIPQIEKMYP 326
>emb|CAF96904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 473
Score = 77.4 bits (189), Expect = 2e-13
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
V G+ V T+ +K+ G ++S + G VG + +K GG +WLY L + S+
Sbjct: 127 VNGLSVAETLGIKSDNTGRPEVSSISCGASVGSVKVKFHGGASWLYNLFSRYINRALESA 186
Query: 60 VEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTE 119
+++ + + I+ ++ L++L +DK + + + V +P +S SSI + + G F
Sbjct: 187 LQKQICPLVTNAISDVNPRLKTLNVLANVDKYAEIEYAMVSSPDVSTSSINLKLKGQFYN 246
Query: 120 RSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLII--DELP- 176
+ E F + S NM+ + + + + SA+ VY AG + + I D +P
Sbjct: 247 IGQHQEPPFSAPAFSLPSENS---NMLYIGMSAFTVNSAAFVYHKAGALSMYITDDMIPK 303
Query: 177 -DQVILNTAECRFIVPQLYKQYP 198
+ L T +P++ KQ+P
Sbjct: 304 SSPIRLTTNTFGTFIPEISKQFP 326
>dbj|BAB91243.1| LBP (LPS binding protein)/BPI (bactericidal/permeability-increasing
protein)-1 [Oncorhynchus mykiss]
Length = 473
Score = 75.1 bits (183), Expect = 1e-12
Identities = 54/203 (26%), Positives = 98/203 (47%), Gaps = 8/203 (3%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
V G+ V ++ +K+ E G +S ++ VG SIK GG +WLY L + S+
Sbjct: 127 VDGLTVTDSITIKSDETGRPTVSSVNCVANVGSASIKFHGGASWLYNLFSAYIDKALRSA 186
Query: 60 VEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTE 119
+++ + + + I ++ L++L +DK + + S V +P +SN+SI ++ G F
Sbjct: 187 LQKQICPLVADTITDMNPHLKTLNVLAKVDKYAEVEYSMVTSPTISNASIDFSLKGEFYN 246
Query: 120 RSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLII--DELP- 176
+ E F + + NM+ + + + SA VY NAG + L I D +P
Sbjct: 247 IGKHQEPPFSPTPFSLPPQ---VNNMLYIGMSAFTTNSAGFVYNNAGALSLYITDDMIPP 303
Query: 177 -DQVILNTAECRFIVPQLYKQYP 198
+ LNT +P++ K++P
Sbjct: 304 SSPIRLNTRTFGAFIPEIAKRFP 326
>gb|AAM52336.1| bactericidal permeability increasing protein/lipopolysaccharide
binding protein variant b [Gadus morhua]
Length = 473
Score = 73.2 bits (178), Expect = 5e-12
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
+K + + +++L++ G +++ +G +S+KL GG +WLY L + S
Sbjct: 127 IKSLSITTSISLRSDNMGLPAVAMASCTTTLGGVSVKLHGGASWLYNLFRRFIEKGLQSQ 186
Query: 60 VEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTE 119
+++ + + E ++ +++FL+++ P+D+ + + V +P +S+SSI + + G F
Sbjct: 187 LQKKLCPLVAESVSSMNQFLKTVKVMAPVDRYAEIAYPMVSSPDISSSSIGLNLKGEFYN 246
Query: 120 RSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQLII--D 173
+E S A LPN M+ + L + SAS VY AG + L I D
Sbjct: 247 IGNHMEP-------PFSPAPFFLPNQEQSMLYIGLSAFTANSASFVYNKAGTLSLKITDD 299
Query: 174 ELP--DQVILNTAECRFIVPQLYKQYP 198
+P + L T ++PQ+ K +P
Sbjct: 300 MVPRSSPIRLTTNTFGVLIPQIAKLFP 326
>gb|AAM52335.1| bactericidal permeability increasing protein/lipopolysaccharide
binding protein variant a [Gadus morhua]
Length = 473
Score = 72.8 bits (177), Expect = 6e-12
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
+K + + +++L++ G +++ +G +S+KL GG +WLY L + S
Sbjct: 127 IKSLSITTSISLRSDNMGLPAVAMASCTTTLGGVSVKLHGGASWLYNLFRRFIEKGLQSQ 186
Query: 60 VEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTE 119
+++ + + E ++ +++FL+++ P+D+ + + V +P +S+SSI + + G F
Sbjct: 187 LQKKLCPLVAESVSSMNQFLKTVNVMAPVDRYAEIAYPMVSSPDISSSSIGLNLKGEFYN 246
Query: 120 RSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQLII--D 173
+E S A LPN M+ + L + SAS VY AG + L I D
Sbjct: 247 IGNHMEP-------PFSPAPFFLPNQEQSMLYIGLSAFTANSASFVYNKAGTLSLKITDD 299
Query: 174 ELP--DQVILNTAECRFIVPQLYKQYP 198
+P + L T ++PQ+ K +P
Sbjct: 300 MVPRSSPIRLTTNTFGVLIPQIAKLFP 326
>dbj|BAB91244.1| LBP (LPS binding protein)/BPI (bactericidal/permeability-increasing
protein) like-2 [Oncorhynchus mykiss]
Length = 473
Score = 70.9 bits (172), Expect = 2e-11
Identities = 50/203 (24%), Positives = 94/203 (45%), Gaps = 8/203 (3%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
V G+ + + +K+ E G +S ++ VG SIK GG +WLY L + S+
Sbjct: 127 VNGLTITADIAIKSDETGRPTVSTVNCVANVGSASIKFHGGASWLYNLFKSYIDKALRSA 186
Query: 60 VEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTE 119
+++ + + + I ++ L++ +D+ + + S V +P +S SSI ++ G F
Sbjct: 187 LQKQICPLVADVITDMNPHLKTFNVLAKVDQYAEIEYSMVTSPTISKSSIEFSLKGEFYN 246
Query: 120 RSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLII--DELP- 176
+ E F + NM+ + + + SA VY NAG + L + D +P
Sbjct: 247 IGKHQEPPFSPTPFSLPPQDN---NMLYIGVSSFTPNSAGFVYNNAGALSLYVTDDMIPP 303
Query: 177 -DQVILNTAECRFIVPQLYKQYP 198
+ LNT +P++ K++P
Sbjct: 304 SSPIRLNTGTFGVFIPEIAKRFP 326
>gb|AAH89237.1| MGC108117 protein [Xenopus tropicalis]
gi|62751677|ref|NP_001015694.1| MGC108117 protein
[Xenopus tropicalis]
Length = 473
Score = 70.1 bits (170), Expect = 4e-11
Identities = 51/208 (24%), Positives = 96/208 (45%), Gaps = 17/208 (8%)
Query: 1 VKGMQVGLTVNL-KNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
V+G+ + + + L + G +S D C++ D+ I + G WL + + + +
Sbjct: 127 VEGLSISVGLQLGSDASGRPTISSSDCSCHISDVKIHVSGKFRWLVDVFHKSIDNALRKA 186
Query: 60 VEEAVSEKINEGIA-KLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
+E + + + I KL LQ+LP +D +A++ S G P ++ S+ + + G F
Sbjct: 187 IEGQLCPVVTQSITNKLQPLLQTLPVTAQIDHVAAIDYSLTGPPTVTAQSLDVQLKGEFF 246
Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQLII-- 172
+ + ++ S LP M+ + +Y+ +A Y++AGK + I
Sbjct: 247 DIA-------HRTTPPFSPPPVPLPAEQNLMVYFGVSDYLFNTAGYAYYSAGKFESYITD 299
Query: 173 DELPD--QVILNTAECRFIVPQLYKQYP 198
D +P V LNT+ ++PQL K YP
Sbjct: 300 DMIPKNFSVHLNTSSFGILIPQLSKMYP 327
>gb|AAH74326.1| MGC84153 protein [Xenopus laevis]
Length = 476
Score = 66.6 bits (161), Expect = 4e-10
Identities = 50/210 (23%), Positives = 99/210 (46%), Gaps = 19/210 (9%)
Query: 1 VKGMQVGLTVNL---KNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIA 57
+K + + ++V L ++ G ++ D C++ ++ + + G WL L + +
Sbjct: 128 IKVLGISISVGLILGSDESGRPTIAPSDCSCHISNVEVHMSGTIGWLVDLFHNNVESELR 187
Query: 58 SSVEEAVSEKINEGIA-KLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGL 116
S+E + ++ + I+ KL LQ+LP +D+ SA++ S G P + + I + + G
Sbjct: 188 QSMENKICPEVTQSISSKLLPLLQTLPVTTKIDQISAIDYSLTGPPSVMANWIDVLLKGE 247
Query: 117 FTERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKM--QL 170
F + S ++ S LP M+ ++ EY+ +A VY +AG + L
Sbjct: 248 FFDIS-------HRTTPPFSPPVMSLPPEQDLMVYFAVSEYLFNTAGFVYQDAGALVFNL 300
Query: 171 IIDELPDQ--VILNTAECRFIVPQLYKQYP 198
D +P + + LNT+ ++P + K YP
Sbjct: 301 TDDMIPKESSMHLNTSSFGILIPSISKMYP 330
>ref|XP_589715.1| PREDICTED: similar to lipopolysaccharide-binding protein precursor,
partial [Bos taurus]
Length = 358
Score = 62.8 bits (151), Expect = 6e-09
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 1 VKGMQVGLTVNLKNQ-EGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
VKG+ + + + L ++ G K+++ ++ D+ + + G WL L +
Sbjct: 10 VKGITISVNLLLDSEPSGRPKVAVSSCSSHIRDVEVHISGDLGWLLNLFHNQIESRFRRV 69
Query: 60 VEEAVSEKINEGI-AKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
+E + E I + + ++L +LQ+LP +D + L+ S +G P + + + G
Sbjct: 70 LESKICEIIEDSVTSELQPYLQTLPVTTEIDHLAGLDYSLMGAPQATAQMLDVMFKGEIF 129
Query: 119 ERSEVVESEGYKKGFKISSACGGLP----NMIKVSLHEYVIQSASLVYFNAGKMQLII-- 172
R + + + LP M+ ++ +Y +ASLVY AG + I
Sbjct: 130 SRDD-------RFPVAFLAPVMNLPEEHSRMVYFAISDYAFNTASLVYHKAGFLNFTITD 182
Query: 173 DELP--DQVILNTAECRFIVPQLYKQYP 198
D +P + LNT R VP++ + YP
Sbjct: 183 DVIPPDSSIRLNTKSFRAFVPRIARLYP 210
>gb|AAH04795.1| Lbp protein [Mus musculus]
Length = 481
Score = 59.7 bits (143), Expect = 5e-08
Identities = 51/208 (24%), Positives = 84/208 (39%), Gaps = 17/208 (8%)
Query: 1 VKGMQVGLTVNL-KNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
VKG+ + + + L + G +S + DL + + G WL L + +
Sbjct: 133 VKGVTISVDLLLGMDPSGRPTVSASGCSSRICDLDVHISGNVGWLLNLFHNQIESKLQKV 192
Query: 60 VEEAVSEKINEGIAK-LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
+E V E I + + L +LQ+LP +D ++ S V P + + G
Sbjct: 193 LENKVCEMIQKSVTSDLQPYLQTLPVTAEIDNVLGIDYSLVAAPQAKAQVLDVMFKGEIF 252
Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQLII-- 172
R+ ++ + LP M+ S+ ++ AS VY AG + I
Sbjct: 253 NRN-------HRSPVATPTPTMSLPEDSKQMVYFSISDHAFNIASRVYHQAGYLNFSITD 305
Query: 173 DELP--DQVILNTAECRFIVPQLYKQYP 198
D LP + LNT R PQ+YK+YP
Sbjct: 306 DMLPPDSSIRLNTKAFRPFTPQIYKKYP 333
>ref|NP_032515.1| lipopolysaccharide-binding protein [Mus musculus]
gi|1430867|emb|CAA67727.1| LPS-binding protein [Mus
musculus] gi|2497616|sp|Q61805|LBP_MOUSE
Lipopolysaccharide-binding protein precursor (LBP)
Length = 481
Score = 58.2 bits (139), Expect = 2e-07
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 17/208 (8%)
Query: 1 VKGMQVGLTVNL-KNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
VKG+ + + + L + G +S + DL + + G WL L + +
Sbjct: 133 VKGVTISVDLLLGMDPSGRPTVSASGCSSRICDLDVHISGNVGWLLNLFHNQIESKLQKV 192
Query: 60 VEEAVSEKINEGIAK-LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
+E V E I + + L +LQ+LP +D ++ S V P + + G
Sbjct: 193 LENKVCEMIQKSVTSDLQPYLQTLPVTAEIDNVLGIDYSLVAAPQAKAQVLDVMFKGEIF 252
Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQLII-- 172
R+ ++ + LP M+ ++ ++ AS VY AG + I
Sbjct: 253 NRN-------HRSPVATPTPTMSLPEDSKQMVYFAISDHAFNIASRVYHQAGYLNFSITD 305
Query: 173 DELPDQ--VILNTAECRFIVPQLYKQYP 198
D LP + LNT R PQ+YK+YP
Sbjct: 306 DMLPHDSGIRLNTKAFRPFTPQIYKKYP 333
>emb|CAC10462.1| LBP [Homo sapiens] gi|31652249|ref|NP_004130.2|
lipopolysaccharide-binding protein precursor [Homo
sapiens]
Length = 481
Score = 57.4 bits (137), Expect = 3e-07
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
VKG+ + + + L ++ G ++ + D+ + + G WL L +
Sbjct: 133 VKGISISVNLLLGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIESKFQKV 192
Query: 60 VEEAVSEKINEGIAK-LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
+E + E I + ++ L +LQ+LP +D + ++ S V P + + + G
Sbjct: 193 LESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIF 252
Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQL-IID 173
R+ ++ + +A LP M+ ++ +YV +ASLVY G + I D
Sbjct: 253 HRN-------HRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITD 305
Query: 174 EL--PDQVI-LNTAECRFIVPQLYKQYP 198
++ PD I L T R VP+L + YP
Sbjct: 306 DMIPPDSNIRLTTKSFRPFVPRLARLYP 333
>gb|AAH22256.1| LBP protein [Homo sapiens]
Length = 477
Score = 57.4 bits (137), Expect = 3e-07
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 1 VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
VKG+ + + + L ++ G ++ + D+ + + G WL L +
Sbjct: 133 VKGISISVNLLLGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIESKFQKV 192
Query: 60 VEEAVSEKINEGIAK-LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
+E + E I + ++ L +LQ+LP +D + ++ S V P + + + G
Sbjct: 193 LESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIF 252
Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQL-IID 173
R+ ++ + +A LP M+ ++ +YV +ASLVY G + I D
Sbjct: 253 HRN-------HRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITD 305
Query: 174 EL--PDQVI-LNTAECRFIVPQLYKQYP 198
++ PD I L T R VP+L + YP
Sbjct: 306 DMIPPDSNIRLTTKSFRPFVPRLARLYP 333
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.138 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 325,922,623
Number of Sequences: 2540612
Number of extensions: 12184754
Number of successful extensions: 31485
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 31412
Number of HSP's gapped (non-prelim): 86
length of query: 212
length of database: 863,360,394
effective HSP length: 122
effective length of query: 90
effective length of database: 553,405,730
effective search space: 49806515700
effective search space used: 49806515700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0134.16