BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0132.6
(162 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA12358.1| ribosomal protein L24 [Cicer arietinum] gi|60940... 292 2e-78
gb|AAG13986.1| 60S ribosomal protein L24 [Prunus avium] gi|52783... 279 2e-74
emb|CAA63960.1| L24 ribosomal protein [Hordeum vulgare subsp. vu... 274 7e-73
ref|XP_475453.1| putative 60S ribosomal protein L24 [Oryza sativ... 274 7e-73
gb|AAM62554.1| 60S ribosomal protein L24 [Arabidopsis thaliana] ... 272 3e-72
dbj|BAD82702.1| putative 60S ribosomal protein L24 [Oryza sativa... 271 4e-72
emb|CAB86906.1| 60S ribosomal protein-like [Arabidopsis thaliana... 268 5e-71
ref|NP_911528.1| putative 60S ribosomal protein L24 [Oryza sativ... 266 1e-70
pir||F84782 60S ribosomal protein L24 [imported] - Arabidopsis t... 265 3e-70
emb|CAA20919.1| SPCC330.14c [Schizosaccharomyces pombe] gi|19075... 135 4e-31
emb|CAB03611.1| rpl24 [Schizosaccharomyces pombe] gi|19115030|re... 134 9e-31
emb|CAG88582.1| unnamed protein product [Debaryomyces hansenii C... 133 1e-30
ref|XP_319401.2| ENSANGP00000012247 [Anopheles gambiae str. PEST... 132 4e-30
ref|NP_011484.1| Ribosomal protein L30 of the large (60S) riboso... 131 7e-30
emb|CAA59806.1| RPL30B [Saccharomyces cerevisiae] gi|6321587|ref... 130 1e-29
emb|CAG99527.1| RL24_KLULA [Kluyveromyces lactis NRRL Y-1140] gi... 130 1e-29
emb|CAG57726.1| unnamed protein product [Candida glabrata CBS138... 130 1e-29
gb|AAS53848.1| AFR477Cp [Ashbya gossypii ATCC 10895] gi|45198995... 129 2e-29
gb|EAK98296.1| likely cytosolic ribosomal protein L24 [Candida a... 127 1e-28
gb|AAV90721.1| ribosomal protein L24 [Aedes albopictus] 126 2e-28
>emb|CAA12358.1| ribosomal protein L24 [Cicer arietinum]
gi|6094040|sp|O65743|RL24_CICAR 60S ribosomal protein
L24
Length = 164
Score = 292 bits (748), Expect = 2e-78
Identities = 146/163 (89%), Positives = 154/163 (93%), Gaps = 2/163 (1%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSGAKIYPGRGIRFIR DSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ
Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKD AQEA +K+RR+TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQGKGG--KVAAPKGPKLGGGGGK 161
KTKDEK+AKKAEV +KAQKSQGKG K A PKGPK+GGGGGK
Sbjct: 121 KTKDEKKAKKAEVASKAQKSQGKGNVQKGALPKGPKMGGGGGK 163
>gb|AAG13986.1| 60S ribosomal protein L24 [Prunus avium]
gi|52783264|sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein
L24
Length = 186
Score = 279 bits (713), Expect = 2e-74
Identities = 142/160 (88%), Positives = 150/160 (93%), Gaps = 4/160 (2%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQ
Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKDIAQEA +K+RR+TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQGKGGKV---AAPKGPKLGG 157
KTKDEK+AKKAEV TK+QKSQGKG A PKGPKLGG
Sbjct: 121 KTKDEKKAKKAEV-TKSQKSQGKGSIAKGGAQPKGPKLGG 159
>emb|CAA63960.1| L24 ribosomal protein [Hordeum vulgare subsp. vulgare]
gi|1710521|sp|P50888|RL24_HORVU 60S ribosomal protein
L24 gi|7440778|pir||T06178 ribosomal protein L24 -
barley
Length = 162
Score = 274 bits (700), Expect = 7e-73
Identities = 139/163 (85%), Positives = 149/163 (91%), Gaps = 2/163 (1%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHNRLKP+KL WTAM+RKQ
Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKDI EAA+K+RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQ-GKGGKVAAPKGPKLGGGGGKR 162
KTKDEK+AKKAEV TK+QKSQ GKG KGPKLGGGGGKR
Sbjct: 121 KTKDEKKAKKAEV-TKSQKSQGGKGAVQKGSKGPKLGGGGGKR 162
>ref|XP_475453.1| putative 60S ribosomal protein L24 [Oryza sativa (japonica
cultivar-group)] gi|46575972|gb|AAT01333.1| putative 60S
ribosomal protein L24 [Oryza sativa (japonica
cultivar-group)]
Length = 161
Score = 274 bits (700), Expect = 7e-73
Identities = 135/162 (83%), Positives = 148/162 (91%), Gaps = 1/162 (0%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSG KIYPG+GIRFIR+DSQVFLF NSKCKRYFHNRLKP+KLTWTAM+RKQ
Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKDI EA +K+RR+TKKPYSRSIVGA+LEVIQK+R EKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQGKGGKVAAPKGPKLGGGGGKR 162
KTKDEK+AKKAEV TK+QKSQ KG KGPK+GGGGGKR
Sbjct: 121 KTKDEKKAKKAEV-TKSQKSQSKGAAPRGSKGPKIGGGGGKR 161
>gb|AAM62554.1| 60S ribosomal protein L24 [Arabidopsis thaliana]
gi|21389697|gb|AAM48047.1| 60S ribosomal protein L24
[Arabidopsis thaliana] gi|9755849|emb|CAC01930.1| 60S
ribosomal protein L24 (RL24) [Arabidopsis thaliana]
gi|20197923|gb|AAM15314.1| 60S ribosomal protein L24
[Arabidopsis thaliana] gi|20197729|gb|AAD20138.2| 60S
ribosomal protein L24 [Arabidopsis thaliana]
gi|18252831|gb|AAL62342.1| 60S ribosomal protein L24
[Arabidopsis thaliana] gi|16604376|gb|AAL24194.1|
At2g36620/F1O11.25 [Arabidopsis thaliana]
gi|18404176|ref|NP_565851.1| 60S ribosomal protein L24
(RPL24A) [Arabidopsis thaliana]
Length = 164
Score = 272 bits (695), Expect = 3e-72
Identities = 135/164 (82%), Positives = 148/164 (89%), Gaps = 2/164 (1%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQ
Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKD AQEA +++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQGKGG--KVAAPKGPKLGGGGGKR 162
KTKDEK+AKK E +K QKSQ KG K AAPK K+GGGGG+R
Sbjct: 121 KTKDEKKAKKVEYASKQQKSQVKGNIPKSAAPKAAKMGGGGGRR 164
>dbj|BAD82702.1| putative 60S ribosomal protein L24 [Oryza sativa (japonica
cultivar-group)]
Length = 162
Score = 271 bits (693), Expect = 4e-72
Identities = 135/163 (82%), Positives = 149/163 (90%), Gaps = 2/163 (1%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSG KIYPG+GIRFIR+DSQVFLF NSKCKRYFHNRLKP+KLTWTAM+RKQ
Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKDI EA +K+RR+TKKPYSRSIVGATLEVIQK+R+EKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQGKGGKV-AAPKGPKLGGGGGKR 162
KTKDEK+AKKAEV K+QK+Q KGG KGPK+GGGGGKR
Sbjct: 121 KTKDEKKAKKAEV-AKSQKTQSKGGATQRGAKGPKIGGGGGKR 162
>emb|CAB86906.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|30102870|gb|AAP21353.1| At3g53020 [Arabidopsis
thaliana] gi|20260562|gb|AAM13179.1| 60S ribosomal
protein-like [Arabidopsis thaliana]
gi|16648706|gb|AAL25545.1| AT3g53020/F8J2_190
[Arabidopsis thaliana] gi|15231730|ref|NP_190870.1| 60S
ribosomal protein L24 (RPL24B) [Arabidopsis thaliana]
gi|26454659|sp|P38666|RL24_ARATH 60S ribosomal protein
L24 gi|11276732|pir||T47559 60S ribosomal protein-like -
Arabidopsis thaliana
Length = 163
Score = 268 bits (684), Expect = 5e-71
Identities = 133/163 (81%), Positives = 146/163 (88%), Gaps = 1/163 (0%)
Query: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQ 60
MVLKTELCRFSG KIYPGRGIRFIRSDSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQ
Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQ 60
Query: 61 HKKDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVK 120
HKKD AQEA +++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKER+K
Sbjct: 61 HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIK 120
Query: 121 KTKDEKRAKKAEVQTKAQKSQGKGGK-VAAPKGPKLGGGGGKR 162
KTKDEK+AKK E +K QK + K AA KGPK+GGGGGKR
Sbjct: 121 KTKDEKKAKKVEFASKQQKVKANFPKAAAASKGPKVGGGGGKR 163
>ref|NP_911528.1| putative 60S ribosomal protein L24 [Oryza sativa (japonica
cultivar-group)] gi|22093626|dbj|BAC06922.1| putative
60S ribosomal protein L24 [Oryza sativa (japonica
cultivar-group)] gi|50510087|dbj|BAD30738.1| putative
60S ribosomal protein L24 [Oryza sativa (japonica
cultivar-group)]
Length = 160
Score = 266 bits (681), Expect = 1e-70
Identities = 131/159 (82%), Positives = 145/159 (90%), Gaps = 1/159 (0%)
Query: 4 KTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKK 63
+TELCRFSGAKIYPG+GIRFIR+DSQVFLF NSKCKRYFHNRLKP+KLTWTAM+RKQHKK
Sbjct: 3 RTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKPAKLTWTAMYRKQHKK 62
Query: 64 DIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKTK 123
DI EA +K+RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAARE+ALREIKER+KKTK
Sbjct: 63 DIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAARESALREIKERIKKTK 122
Query: 124 DEKRAKKAEVQTKAQKSQGKGGKVAAPKGPKLGGGGGKR 162
DEK+AKKAEV K+QK+ GKG KGPKLGGGGGKR
Sbjct: 123 DEKKAKKAEV-AKSQKASGKGNAPKPGKGPKLGGGGGKR 160
>pir||F84782 60S ribosomal protein L24 [imported] - Arabidopsis thaliana
Length = 177
Score = 265 bits (677), Expect = 3e-70
Identities = 131/160 (81%), Positives = 144/160 (89%), Gaps = 2/160 (1%)
Query: 5 TELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKD 64
TELCRFSG KIYPGRGIRFIRSDSQVFLF+NSKCKRYFHN+LKPSKL WTAM+RKQHKKD
Sbjct: 18 TELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKD 77
Query: 65 IAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKTKD 124
AQEA +++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKER+KKTKD
Sbjct: 78 AAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKD 137
Query: 125 EKRAKKAEVQTKAQKSQGKGG--KVAAPKGPKLGGGGGKR 162
EK+AKK E +K QKSQ KG K AAPK K+GGGGG+R
Sbjct: 138 EKKAKKVEYASKQQKSQVKGNIPKSAAPKAAKMGGGGGRR 177
>emb|CAA20919.1| SPCC330.14c [Schizosaccharomyces pombe]
gi|19075214|ref|NP_587714.1| hypothetical protein
SPCC330.14c [Schizosaccharomyces pombe 972h-]
gi|52783219|sp|O74884|RL24B_SCHPO 60S ribosomal protein
L24-B gi|5926756|dbj|BAA84653.1| rpl24
[Schizosaccharomyces pombe]
Length = 149
Score = 135 bits (340), Expect = 4e-31
Identities = 68/148 (45%), Positives = 102/148 (67%), Gaps = 2/148 (1%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+C FSG+K+YPG G F+R D++VF FVN K + F R P +L+WT ++R+ HK
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I++E A+K+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ +
Sbjct: 61 KGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKRAAS 119
Query: 123 KDEKRAKKAEVQTKAQKSQG-KGGKVAA 149
+ EK+A KA+ + + Q K KVAA
Sbjct: 120 ESEKKAIKAKSAASSARGQAIKNAKVAA 147
>emb|CAB03611.1| rpl24 [Schizosaccharomyces pombe] gi|19115030|ref|NP_594118.1|
hypothetical protein SPAC6G9.09c [Schizosaccharomyces
pombe 972h-] gi|52783234|sp|Q92354|RL24A_SCHPO 60S
ribosomal protein L24-A
Length = 149
Score = 134 bits (337), Expect = 9e-31
Identities = 67/148 (45%), Positives = 101/148 (67%), Gaps = 2/148 (1%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+C FSG+K+YPG G F+R D++VF FVN K + F R P +L+WT ++R+ HK
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I++E A+K+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ +
Sbjct: 61 KGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKKAAS 119
Query: 123 KDEKRAKKAEVQTKAQKSQG-KGGKVAA 149
+ EK+A KA+ + + Q K K AA
Sbjct: 120 ESEKKAIKAKSAASSARGQAIKNAKAAA 147
>emb|CAG88582.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50423431|ref|XP_460298.1| unnamed protein product
[Debaryomyces hansenii] gi|52783246|sp|Q6BNC2|RL24_DEBHA
60S ribosomal protein L24
Length = 156
Score = 133 bits (335), Expect = 1e-30
Identities = 68/147 (46%), Positives = 99/147 (67%), Gaps = 6/147 (4%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K EL FSG KIYPGRG F+R DS++F F +SK FH R P +++WT ++R+QHK
Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I++E+A+++ R T K R+IVGA+LE+I++RR++KP R AAR+ L + KE K
Sbjct: 61 KGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKLAKDKEAKKAD 119
Query: 123 KDEKRAKKAE-----VQTKAQKSQGKG 144
K ++A+KA+ Q+K K Q KG
Sbjct: 120 KAARKAEKAKSAAAGAQSKVSKQQSKG 146
>ref|XP_319401.2| ENSANGP00000012247 [Anopheles gambiae str. PEST]
gi|55236427|gb|EAA14532.3| ENSANGP00000012247 [Anopheles
gambiae str. PEST]
Length = 153
Score = 132 bits (331), Expect = 4e-30
Identities = 67/151 (44%), Positives = 96/151 (63%), Gaps = 3/151 (1%)
Query: 7 LCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDIA 66
LC FSG KIYP G +++D + F F+N KC+R F + P K+ WT ++R++HKK I
Sbjct: 4 LCAFSGFKIYPASGKTLVKADGKTFTFLNKKCERSFLMKRNPRKVKWTVLYRRKHKKGIV 63
Query: 67 QEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKTKDEK 126
+EAA+K+ R T+K + R+IVGA+L I +R KPEVR A RE A++ KE K + +K
Sbjct: 64 EEAAKKRTRRTQK-FQRAIVGASLSDIMAKRNMKPEVRKAQREQAIKAAKEAKKAKQTDK 122
Query: 127 RAKKAEVQTKAQKSQGKGGKVAAPKGPKLGG 157
+ K A+ K QK+ K KVA P++GG
Sbjct: 123 KPKAAQPNPKQQKT--KAAKVAQKAAPRVGG 151
>ref|NP_011484.1| Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly
identical to Rpl24Bp and has similarity to rat L24
ribosomal protein; not essential for translation but may
be required for normal translation rate; Rpl24ap
[Saccharomyces cerevisiae] gi|1322506|emb|CAA96732.1|
RPL30A [Saccharomyces cerevisiae]
gi|132943|sp|P04449|RL24A_YEAST 60S ribosomal protein
L24-A (L30A) (RP29) (YL21) gi|172486|gb|AAA35004.1|
ribosomal protein L30A
Length = 155
Score = 131 bits (329), Expect = 7e-30
Identities = 73/153 (47%), Positives = 97/153 (62%), Gaps = 7/153 (4%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+ FSGAKIYPGRG F+R DS++F F NSK F R P ++ WT +FRK HK
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I +E A+K+ R T K R I GA+L++I++RR+ KPEVR A RE L+ KE+ K
Sbjct: 61 KGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLKANKEKKKAE 119
Query: 123 KDEKRAKKAE----VQTKAQKSQGKGG--KVAA 149
K ++A+KA+ +K K Q KG KVAA
Sbjct: 120 KAARKAEKAKSAGTQSSKFSKQQAKGAFQKVAA 152
>emb|CAA59806.1| RPL30B [Saccharomyces cerevisiae] gi|6321587|ref|NP_011664.1|
Ribosomal protein L30 of the large (60S) ribosomal
subunit, nearly identical to Rpl24Ap and has similarity
to rat L24 ribosomal protein; not essential for
translation but may be required for normal translation
rate; Rpl24bp [Saccharomyces cerevisiae]
gi|1323250|emb|CAA97162.1| RPL30B [Saccharomyces
cerevisiae] gi|132946|sp|P24000|RL24B_YEAST 60S
ribosomal protein L24-B (L30B) (RP29) (YL21)
gi|45269529|gb|AAS56145.1| YGR148C [Saccharomyces
cerevisiae] gi|171821|gb|AAA34736.1| ribosomal protein
L30 (RPL30B), (3' end of exon not determined)
Length = 155
Score = 130 bits (327), Expect = 1e-29
Identities = 74/153 (48%), Positives = 99/153 (64%), Gaps = 7/153 (4%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+ FSGAKIYPGRG F+R DS++F F NSK F R P ++ WT +FRK HK
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I +E A+K+ R T K R I GA+L++I++RR+ KPEVR A RE L+ KE+ +
Sbjct: 61 KGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLKANKEKKRAE 119
Query: 123 KDEKRAKKAE---VQ-TKAQKSQGKGG--KVAA 149
K ++A+KA+ VQ +K K Q KG KVAA
Sbjct: 120 KAARKAEKAKSAGVQGSKVSKQQAKGAFQKVAA 152
>emb|CAG99527.1| RL24_KLULA [Kluyveromyces lactis NRRL Y-1140]
gi|50308871|ref|XP_454440.1| RL24_KLULA [Kluyveromyces
lactis] gi|730554|sp|P38665|RL24_KLULA 60S ribosomal
protein L24 (Ribosomal protein L30)
gi|173317|gb|AAA35269.1| ribosomal protein L30
Length = 155
Score = 130 bits (327), Expect = 1e-29
Identities = 69/153 (45%), Positives = 100/153 (65%), Gaps = 7/153 (4%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+ FSGAKIYPGRG F+R DS++F F +SK FH R P ++ WT ++R+ HK
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I +E ARK+ R + K R++VGA+LE+I++RR+ KPEVR A R+ + KE+ K
Sbjct: 61 KGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVRKAQRDEKKKADKEKKKAD 119
Query: 123 KDEKRAKKAEVQ----TKAQKSQGKGG--KVAA 149
K ++++KA++ +K K Q KG KVAA
Sbjct: 120 KAARKSEKAKLAAAQGSKVSKQQAKGAFQKVAA 152
>emb|CAG57726.1| unnamed protein product [Candida glabrata CBS138]
gi|50284811|ref|XP_444833.1| unnamed protein product
[Candida glabrata] gi|52783250|sp|Q6FXY9|RL24_CANGA 60S
ribosomal protein L24
Length = 155
Score = 130 bits (327), Expect = 1e-29
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 7/153 (4%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+ FSGAKIYPGRG F+R DS++F F NSK F R P ++ WT ++R+ HK
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I +E A+K+ R T K R+IVGA+LE+I++RR+ KPEVR A R+ + KE+ K
Sbjct: 61 KGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKRDDKAKADKEKKKAD 119
Query: 123 KDEKRAKKAEVQ----TKAQKSQGKGG--KVAA 149
K ++A+KA++ +K K Q KG KVAA
Sbjct: 120 KAARKAEKAKLAAAQGSKVSKQQAKGAFQKVAA 152
>gb|AAS53848.1| AFR477Cp [Ashbya gossypii ATCC 10895] gi|45198995|ref|NP_986024.1|
AFR477Cp [Eremothecium gossypii]
gi|52783254|sp|Q752U6|RL24_ASHGO 60S ribosomal protein
L24
Length = 155
Score = 129 bits (325), Expect = 2e-29
Identities = 70/153 (45%), Positives = 98/153 (63%), Gaps = 7/153 (4%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+ FSGAKIYPGRG F+R DS+VF F +SK FH R P ++ WT ++R+ HK
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I +E A+K+ R T K R++VGA+LE+I++RR+ KPE+R A R+ + KE+ K
Sbjct: 61 KGITEEVAKKRSRKTVKA-QRAVVGASLELIKERRSLKPEIRKAKRDEKAKADKEKKKAD 119
Query: 123 KDEKRAKKAE----VQTKAQKSQGKGG--KVAA 149
K ++A KA+ +K K Q KG KVAA
Sbjct: 120 KAARKADKAKSAATQASKISKQQAKGAFQKVAA 152
>gb|EAK98296.1| likely cytosolic ribosomal protein L24 [Candida albicans SC5314]
gi|46438896|gb|EAK98220.1| likely cytosolic ribosomal
protein L24 [Candida albicans SC5314]
Length = 155
Score = 127 bits (319), Expect = 1e-28
Identities = 65/146 (44%), Positives = 98/146 (66%), Gaps = 5/146 (3%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K E+ FSG+KIYPGRG F+R DS++F F +SK F R P +++WT ++R+ HK
Sbjct: 1 MKIEVDSFSGSKIYPGRGTLFVRGDSKIFRFQSSKSASLFQQRKNPRRISWTVLYRRHHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K I++EAA+K+ R T K + R+IVGA+LE+I++RR++KP R AAR++ L + KE K
Sbjct: 61 KGISEEAAKKRTRKTVK-HQRAIVGASLELIKERRSQKPSDRKAARDSKLAKDKEAKKAA 119
Query: 123 KDEKRAKKAEV----QTKAQKSQGKG 144
K ++A+KA+ + K Q KG
Sbjct: 120 KAARKAEKAKAVASGASVVSKQQAKG 145
>gb|AAV90721.1| ribosomal protein L24 [Aedes albopictus]
Length = 153
Score = 126 bits (316), Expect = 2e-28
Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 4/155 (2%)
Query: 3 LKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHK 62
+K LC FSG KIYP G +++D + F F+N KC+R F + P K+ WT ++R++HK
Sbjct: 1 MKIGLCAFSGFKIYPASGKTLVKADGKTFTFINKKCERSFLMKRNPRKVKWTVLYRRKHK 60
Query: 63 KDIAQEAARKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERVKKT 122
K + +EAA+K+ R T K + R+IVGA+L I +R KPEVR A R+ A++ KE K
Sbjct: 61 KGMVEEAAKKRTRRTMK-FQRAIVGASLTDIMAKRNMKPEVRKAQRDQAIKVAKEAKKAK 119
Query: 123 KDEKRAKKAEVQTKAQKSQGKGGKVAAPKGPKLGG 157
+ EK+ KA +K QK+ K KV+ P++GG
Sbjct: 120 QAEKKVTKAPA-SKQQKT--KAAKVSQKAAPRVGG 151
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.132 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,894,303
Number of Sequences: 2540612
Number of extensions: 9172916
Number of successful extensions: 75849
Number of sequences better than 10.0: 1717
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 1268
Number of HSP's that attempted gapping in prelim test: 70641
Number of HSP's gapped (non-prelim): 4902
length of query: 162
length of database: 863,360,394
effective HSP length: 118
effective length of query: 44
effective length of database: 563,568,178
effective search space: 24796999832
effective search space used: 24796999832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0132.6