BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0127a.6
(105 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK76692.1| unknown protein [Arabidopsis thaliana] 104 5e-22
dbj|BAC41911.1| unknown protein [Arabidopsis thaliana] 104 5e-22
gb|AAD38263.1| Hypothetical Protein [Arabidopsis thaliana] gi|26... 104 5e-22
ref|XP_475178.1| unknown protein [Oryza sativa (japonica cultiva... 100 1e-20
dbj|BAC42421.1| unknown protein [Arabidopsis thaliana] gi|290289... 95 5e-19
ref|NP_171951.2| integral membrane transporter family protein [A... 95 5e-19
gb|AAB80629.1| Similar to Synechocystis integral membrane protei... 95 5e-19
gb|AAM10323.1| AT5g54860/MBG8_12 [Arabidopsis thaliana] gi|22327... 64 1e-09
ref|ZP_00518975.1| Biopterin transport-related protein BT1 [Croc... 55 5e-07
gb|AAM62749.1| unknown [Arabidopsis thaliana] gi|28059039|gb|AAO... 54 9e-07
pir||C84728 hypothetical protein At2g32040 [imported] - Arabidop... 54 9e-07
dbj|BAB75984.1| all4285 [Nostoc sp. PCC 7120] gi|25533268|pir||A... 54 1e-06
ref|ZP_00158751.1| COG0477: Permeases of the major facilitator s... 54 1e-06
ref|XP_476780.1| putative integral membrane protein [Oryza sativ... 53 2e-06
gb|AAC12874.1| hypothetical protein [Synechococcus sp. PCC 7942]... 53 2e-06
ref|NP_680807.1| hypothetical protein tll0016 [Thermosynechococc... 52 3e-06
ref|ZP_00328462.1| COG0477: Permeases of the major facilitator s... 50 1e-05
ref|ZP_00112424.1| COG0477: Permeases of the major facilitator s... 50 1e-05
ref|YP_172024.1| hypothetical protein syc1314_d [Synechococcus e... 48 5e-05
dbj|BAB08765.1| unnamed protein product [Arabidopsis thaliana] 47 9e-05
>gb|AAK76692.1| unknown protein [Arabidopsis thaliana]
Length = 442
Score = 104 bits (260), Expect = 5e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 2 GYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQH 61
G++VQGFR FPWL +FFL + L V PS LQLLQNSANLPMV P+Y VVSDSVY GQH
Sbjct: 26 GFFVQGFRGFPWLGANFFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQH 85
Query: 62 RVPYIAIG 69
R+PYIA+G
Sbjct: 86 RIPYIAVG 93
>dbj|BAC41911.1| unknown protein [Arabidopsis thaliana]
Length = 442
Score = 104 bits (260), Expect = 5e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 2 GYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQH 61
G++VQGFR FPWL +FFL + L V PS LQLLQNSANLPMV P+Y VVSDSVY GQH
Sbjct: 26 GFFVQGFRGFPWLGANFFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQH 85
Query: 62 RVPYIAIG 69
R+PYIA+G
Sbjct: 86 RIPYIAVG 93
>gb|AAD38263.1| Hypothetical Protein [Arabidopsis thaliana]
gi|26983800|gb|AAN86152.1| unknown protein [Arabidopsis
thaliana] gi|18408153|ref|NP_564843.1| integral
membrane transporter family protein [Arabidopsis
thaliana] gi|25404504|pir||C96672 hypothetical protein
F13O11.19 [imported] - Arabidopsis thaliana
Length = 442
Score = 104 bits (260), Expect = 5e-22
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 2 GYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQH 61
G++VQGFR FPWL +FFL + L V PS LQLLQNSANLPMV P+Y VVSDSVY GQH
Sbjct: 26 GFFVQGFRGFPWLGANFFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQH 85
Query: 62 RVPYIAIG 69
R+PYIA+G
Sbjct: 86 RIPYIAVG 93
>ref|XP_475178.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|54287605|gb|AAV31349.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|48926649|gb|AAT47438.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 438
Score = 99.8 bits (247), Expect = 1e-20
Identities = 45/69 (65%), Positives = 56/69 (80%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
+G+WVQGFR FPWL V+FFLKDG+ VA S+LQ+LQ SANLPMV PL ++SD+V I G
Sbjct: 23 VGFWVQGFRLFPWLGVNFFLKDGMGVAASSLQILQASANLPMVAKPLLGLLSDAVPIRGH 82
Query: 61 HRVPYIAIG 69
R+PY+AIG
Sbjct: 83 RRLPYVAIG 91
>dbj|BAC42421.1| unknown protein [Arabidopsis thaliana] gi|29028944|gb|AAO64851.1|
At1g04570 [Arabidopsis thaliana]
Length = 542
Score = 94.7 bits (234), Expect = 5e-19
Identities = 44/69 (63%), Positives = 52/69 (74%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
LGYWVQG RCFPWLA++F + L + PSTLQL+Q S +LPMV PLY V+SD +YI
Sbjct: 93 LGYWVQGSRCFPWLALNFHMVHSLALQPSTLQLVQYSCSLPMVAKPLYGVLSDVLYIGSG 152
Query: 61 HRVPYIAIG 69
RVPYIAIG
Sbjct: 153 RRVPYIAIG 161
>ref|NP_171951.2| integral membrane transporter family protein [Arabidopsis thaliana]
Length = 542
Score = 94.7 bits (234), Expect = 5e-19
Identities = 44/69 (63%), Positives = 52/69 (74%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
LGYWVQG RCFPWLA++F + L + PSTLQL+Q S +LPMV PLY V+SD +YI
Sbjct: 93 LGYWVQGSRCFPWLALNFHMVHSLALQPSTLQLVQYSCSLPMVAKPLYGVLSDVLYIGSG 152
Query: 61 HRVPYIAIG 69
RVPYIAIG
Sbjct: 153 RRVPYIAIG 161
>gb|AAB80629.1| Similar to Synechocystis integral membrane protein (gb|D64002).
[Arabidopsis thaliana] gi|25406794|pir||C86178
hypothetical protein [imported] - Arabidopsis thaliana
Length = 431
Score = 94.7 bits (234), Expect = 5e-19
Identities = 44/69 (63%), Positives = 52/69 (74%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
LGYWVQG RCFPWLA++F + L + PSTLQL+Q S +LPMV PLY V+SD +YI
Sbjct: 49 LGYWVQGSRCFPWLALNFHMVHSLALQPSTLQLVQYSCSLPMVAKPLYGVLSDVLYIGSG 108
Query: 61 HRVPYIAIG 69
RVPYIAIG
Sbjct: 109 RRVPYIAIG 117
>gb|AAM10323.1| AT5g54860/MBG8_12 [Arabidopsis thaliana]
gi|22327842|ref|NP_200297.2| integral membrane
transporter family protein [Arabidopsis thaliana]
Length = 491
Score = 63.5 bits (153), Expect = 1e-09
Identities = 30/66 (45%), Positives = 41/66 (61%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+ QGFR F W AVS+ LKD L ++PS Q + + A P PLY ++SD + I G+ R
Sbjct: 24 YFTQGFRSFVWTAVSYQLKDRLQLSPSASQFVFSVAFFPWSIKPLYGIISDCIPIGGKKR 83
Query: 63 VPYIAI 68
PY+ I
Sbjct: 84 TPYLVI 89
>ref|ZP_00518975.1| Biopterin transport-related protein BT1 [Crocosphaera watsonii WH
8501] gi|67852502|gb|EAM47942.1| Biopterin
transport-related protein BT1 [Crocosphaera watsonii WH
8501]
Length = 484
Score = 54.7 bits (130), Expect = 5e-07
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSFFLKD L + P+ + L A +P V PL+ +SD + I R
Sbjct: 36 YFVQGILGLARLAVSFFLKDDLGLTPAQMGALTGIAAIPWVIKPLFGFISDGLPIFSYRR 95
Query: 63 VPYIAIGG 70
PY+ I G
Sbjct: 96 RPYLVISG 103
>gb|AAM62749.1| unknown [Arabidopsis thaliana] gi|28059039|gb|AAO29981.1| unknown
protein [Arabidopsis thaliana]
gi|20197619|gb|AAD15400.2| expressed protein
[Arabidopsis thaliana] gi|19698919|gb|AAL91195.1|
unknown protein [Arabidopsis thaliana]
gi|18402856|ref|NP_565734.1| integral membrane
transporter family protein [Arabidopsis thaliana]
Length = 560
Score = 53.9 bits (128), Expect = 9e-07
Identities = 27/68 (39%), Positives = 41/68 (59%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSF+LKD L++ P+ ++ ++LP + PLY +SDSV + G R
Sbjct: 134 YFVQGVLGLARLAVSFYLKDDLHLDPAETAVITGLSSLPWLVKPLYGFISDSVPLFGYRR 193
Query: 63 VPYIAIGG 70
Y+ + G
Sbjct: 194 RSYLVLSG 201
>pir||C84728 hypothetical protein At2g32040 [imported] - Arabidopsis thaliana
Length = 429
Score = 53.9 bits (128), Expect = 9e-07
Identities = 27/68 (39%), Positives = 41/68 (59%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSF+LKD L++ P+ ++ ++LP + PLY +SDSV + G R
Sbjct: 3 YFVQGVLGLARLAVSFYLKDDLHLDPAETAVITGLSSLPWLVKPLYGFISDSVPLFGYRR 62
Query: 63 VPYIAIGG 70
Y+ + G
Sbjct: 63 RSYLVLSG 70
>dbj|BAB75984.1| all4285 [Nostoc sp. PCC 7120] gi|25533268|pir||AF2341 hypothetical
protein all4285 [imported] - Nostoc sp. (strain PCC
7120) gi|17231777|ref|NP_488325.1| hypothetical protein
all4285 [Nostoc sp. PCC 7120]
Length = 473
Score = 53.5 bits (127), Expect = 1e-06
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSFFLKD L ++P + L LP + PL+ VSD + I G R
Sbjct: 36 YFVQGILGLARLAVSFFLKDELLLSPVQVSALMGIVALPWMVKPLFGFVSDGLPIFGYRR 95
Query: 63 VPYIAIGG 70
PY+ + G
Sbjct: 96 RPYLVLSG 103
>ref|ZP_00158751.1| COG0477: Permeases of the major facilitator superfamily [Anabaena
variabilis ATCC 29413]
Length = 472
Score = 53.5 bits (127), Expect = 1e-06
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSFFLKD L ++P + L LP + PL+ VSD + I G R
Sbjct: 36 YFVQGILGLARLAVSFFLKDELLLSPVQVSALMGIVALPWMVKPLFGFVSDGLPIFGYRR 95
Query: 63 VPYIAIGG 70
PY+ + G
Sbjct: 96 RPYLVLSG 103
>ref|XP_476780.1| putative integral membrane protein [Oryza sativa (japonica
cultivar-group)] gi|34394451|dbj|BAC83625.1| putative
integral membrane protein [Oryza sativa (japonica
cultivar-group)]
Length = 490
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSF+LKD L++ P+ ++ ++LP + PLY +SDS+ + G R
Sbjct: 73 YFVQGVLGLARLAVSFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSIPLFGYRR 132
Query: 63 VPYIAIGG 70
Y+ + G
Sbjct: 133 RSYLILSG 140
>gb|AAC12874.1| hypothetical protein [Synechococcus sp. PCC 7942]
gi|53763141|ref|ZP_00351209.1| COG0477: Permeases of the
major facilitator superfamily [Synechococcus elongatus
PCC 7942]
Length = 453
Score = 52.8 bits (125), Expect = 2e-06
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
L Y+VQG LAVSFFLKD L ++P+ + L A LP + P + ++SD + G
Sbjct: 33 LVYFVQGILGLSRLAVSFFLKDDLGLSPAQVSALTGIAALPWMIKPAFGLLSDGFPLGGY 92
Query: 61 HRVPYIAIGG 70
R PY+ G
Sbjct: 93 RRRPYLIAAG 102
>ref|NP_680807.1| hypothetical protein tll0016 [Thermosynechococcus elongatus BP-1]
gi|22293737|dbj|BAC07569.1| tll0016 [Thermosynechococcus
elongatus BP-1]
Length = 451
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
L Y+VQG LA+SFF KD L ++P+ + L A LP V P++ +VSDS+ + G
Sbjct: 34 LVYFVQGVLGLARLAISFFFKDELGLSPAEVAALMGVAALPWVIKPVFGLVSDSLPLLGF 93
Query: 61 HRVPYIAIGG 70
R Y+ + G
Sbjct: 94 RRRSYLVLSG 103
>ref|ZP_00328462.1| COG0477: Permeases of the major facilitator superfamily
[Trichodesmium erythraeum IMS101]
Length = 458
Score = 50.4 bits (119), Expect = 1e-05
Identities = 27/70 (38%), Positives = 38/70 (53%)
Query: 1 LGYWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQ 60
L Y+VQG LA+SFFLKD L + P+ + + +P + PL+ ++D V I G
Sbjct: 34 LVYFVQGILGLGSLAISFFLKDELAMTPAEVSAMLGIVIIPWMIKPLFGFITDGVPILGY 93
Query: 61 HRVPYIAIGG 70
R PYI G
Sbjct: 94 RRGPYIIFSG 103
>ref|ZP_00112424.1| COG0477: Permeases of the major facilitator superfamily [Nostoc
punctiforme PCC 73102]
Length = 471
Score = 50.1 bits (118), Expect = 1e-05
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 3 YWVQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHR 62
Y+VQG LAVSFFLKD L ++P + L LP + P++ +SD + I G R
Sbjct: 36 YFVQGILGLSRLAVSFFLKDELLLSPVQVSALLGIVFLPWMIKPVFGFISDGLPIFGYRR 95
Query: 63 VPYIAIGG 70
PY+ + G
Sbjct: 96 RPYLILSG 103
>ref|YP_172024.1| hypothetical protein syc1314_d [Synechococcus elongatus PCC 6301]
gi|56686282|dbj|BAD79504.1| hypothetical protein
[Synechococcus elongatus PCC 6301]
Length = 417
Score = 48.1 bits (113), Expect = 5e-05
Identities = 25/66 (37%), Positives = 36/66 (53%)
Query: 5 VQGFRCFPWLAVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYAVVSDSVYISGQHRVP 64
+QG LAVSFFLKD L ++P+ + L A LP + P + ++SD + G R P
Sbjct: 1 MQGILGLSRLAVSFFLKDDLGLSPAQVSALTGIAALPWMIKPAFGLLSDGFPLGGYRRRP 60
Query: 65 YIAIGG 70
Y+ G
Sbjct: 61 YLIAAG 66
>dbj|BAB08765.1| unnamed protein product [Arabidopsis thaliana]
Length = 483
Score = 47.4 bits (111), Expect = 9e-05
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 3 YWVQGFR-----CFPWL--------AVSFFLKDGLNVAPSTLQLLQNSANLPMVGTPLYA 49
+W++ R F WL AVS+ LKD L ++PS Q + + A P PLY
Sbjct: 3 HWLKQLRSAFGVAFLWLVCLIYFTQAVSYQLKDRLQLSPSASQFVFSVAFFPWSIKPLYG 62
Query: 50 VVSDSVYISGQHRVPYIAI 68
++SD + I G+ R PY+ I
Sbjct: 63 IISDCIPIGGKKRTPYLVI 81
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.355 0.161 0.564
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,413,214
Number of Sequences: 2540612
Number of extensions: 5010060
Number of successful extensions: 25208
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 25166
Number of HSP's gapped (non-prelim): 46
length of query: 105
length of database: 863,360,394
effective HSP length: 81
effective length of query: 24
effective length of database: 657,570,822
effective search space: 15781699728
effective search space used: 15781699728
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0127a.6