BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0126.13
(168 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB78277.1| hypothetical protein [Arabidopsis thaliana] gi|5... 148 5e-35
ref|XP_475058.1| unknow protein [Oryza sativa (japonica cultivar... 141 8e-33
gb|AAF57107.1| CG1715-PA [Drosophila melanogaster] gi|21358165|r... 45 0.001
ref|XP_624132.1| PREDICTED: similar to MGC80265 protein [Apis me... 44 0.002
emb|CAA64402.1| unnamed protein product [Drosophila melanogaster] 44 0.002
ref|XP_647332.1| hypothetical protein DDB0189568 [Dictyostelium ... 40 0.019
gb|AAY29695.1| unknown protein short splice variant [Theileria l... 40 0.032
gb|AAY29694.1| unknown protein long splice variant [Theileria le... 40 0.032
gb|EAA20445.1| hypothetical protein [Plasmodium yoelii yoelii] 40 0.032
sp|Q92794|MYST3_HUMAN MYST histone acetyltransferase 3 (Runt-rel... 39 0.042
emb|CAH73142.1| TAF3 RNA polymerase II, TATA box binding protein... 39 0.055
emb|CAE06856.1| putative chromosome segregation protein, SMC ATP... 39 0.055
emb|CAC34475.1| TAFII140 protein [Homo sapiens] 39 0.055
ref|XP_327216.1| predicted protein [Neurospora crassa] gi|289206... 39 0.072
emb|CAA44617.2| dynactin [Gallus gallus] gi|14916981|sp|P35458|D... 38 0.094
gb|EAA76465.1| hypothetical protein FG09230.1 [Gibberella zeae P... 37 0.16
gb|AAQ13612.1| MSTP089 [Homo sapiens] 37 0.16
emb|CAA99864.3| Hypothetical protein F55D12.5 [Caenorhabditis el... 37 0.16
ref|NP_492183.1| TGF-beta receptor/activin receptor, type I/II p... 37 0.16
gb|AAF68099.1| PspA [Streptococcus pneumoniae] 37 0.16
>emb|CAB78277.1| hypothetical protein [Arabidopsis thaliana]
gi|5281045|emb|CAB45981.1| hypothetical protein
[Arabidopsis thaliana] gi|20856201|gb|AAM26653.1|
AT4g12340/T4C9_180 [Arabidopsis thaliana]
gi|16648695|gb|AAL25540.1| AT4g12340/T4C9_180
[Arabidopsis thaliana] gi|18413789|ref|NP_567389.1|
expressed protein [Arabidopsis thaliana]
gi|11358347|pir||T48144 hypothetical protein T4C9.180 -
Arabidopsis thaliana
Length = 170
Score = 148 bits (374), Expect = 5e-35
Identities = 73/162 (45%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 1 MGEFTIQISNELVNQLVD-DPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQ 59
MG+F+IQIS++L+NQL + + PK++ ++ + KV+ ++++ ++ K N A P+Q
Sbjct: 1 MGDFSIQISSKLINQLAEGNDQPKRRAKKTKPKVSPQSKQKTNQDEEKKPNPVAE-LPMQ 59
Query: 60 SPLFLPAKPPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKL 119
P F P PP A E++ I+SV++ESEKVLE L+ QE+N+++EVT++AKDL +KE+K+
Sbjct: 60 PPFFFPI-PPQGAASTELESIKSVVKESEKVLEKLELQEKNIVREVTERAKDLREKEFKI 118
Query: 120 PNPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCLRK 161
P PKP PC ++ A + CYKE+I PLKCS FV +F C R+
Sbjct: 119 PEPKPMPCSSDHEAWMKCYKENIGSPLKCSGFVKSFQDCARR 160
>ref|XP_475058.1| unknow protein [Oryza sativa (japonica cultivar-group)]
Length = 180
Score = 141 bits (355), Expect = 8e-33
Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Query: 1 MGEFTIQISNELVNQLV-DDPVPKKKIRRNRRK--VAKETEKPQSKVTGKP--ENAAAPG 55
MG++TIQIS +L++QL DD KKK R+ + K V + ++PQ P E A PG
Sbjct: 1 MGDYTIQISTKLIDQLARDDEKIKKKTRKPKPKKTVKQHQQEPQDNSRELPASEPKAPPG 60
Query: 56 WPVQSPLFLP---AKPPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDL 112
WP+Q P++LP A PP PA E++ IR+VL ESEKV E L KQ M E+ +K+KDL
Sbjct: 61 WPLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEESEKVQEKLDKQHAGMRDELIKKSKDL 120
Query: 113 HDKEYKLPNPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCLR 160
DKE+KLP P PC ER CY + +DPLKC+ V F C+R
Sbjct: 121 RDKEFKLPYQNPTPCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACVR 168
>gb|AAF57107.1| CG1715-PA [Drosophila melanogaster] gi|21358165|ref|NP_651838.1|
CG1715-PA [Drosophila melanogaster]
gi|17945847|gb|AAL48970.1| RE38619p [Drosophila
melanogaster]
Length = 223
Score = 44.7 bits (104), Expect = 0.001
Identities = 40/176 (22%), Positives = 68/176 (37%), Gaps = 27/176 (15%)
Query: 6 IQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSPLFLP 65
I IS+++V +L + + + +K KP +K KP ++ P P
Sbjct: 25 IDISDDVVKRLKAGISQQAREHAAAAEESKPVPKPTTKAAAKPAASSPAASPAPKVSSYP 84
Query: 66 AKPPV---------QPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKE 116
A P+ AD + + +++ E E + K EEN+ +K + +KE
Sbjct: 85 AAVPIYVQGGGHTISAADVQRQMNQELIKNDELWKERMAKLEENL-----KKTNTILEKE 139
Query: 117 YK-------------LPNPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCL 159
Y + K PC + L+CY+ H + LKC V F C+
Sbjct: 140 YANAVENVHKRFVSTASSHKVPPCQDLKSQLLACYRAHPGETLKCIEEVAQFRQCI 195
>ref|XP_624132.1| PREDICTED: similar to MGC80265 protein [Apis mellifera]
Length = 190
Score = 43.9 bits (102), Expect = 0.002
Identities = 39/163 (23%), Positives = 71/163 (42%), Gaps = 12/163 (7%)
Query: 6 IQISNELVNQLV-----DDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQS 60
I+IS +V +L + P ++R +K+T Q + P NA G+P+
Sbjct: 20 IEISESVVERLTQKMNEEKPNVANEVRSATLTDSKKTASSQLSQSDIPVNA---GYPIYQ 76
Query: 61 P-LFLPAKPPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKD---LHDKE 116
P L L A Q + E + ++ + LE + N++ +KA + +DK+
Sbjct: 77 PQLTLTALQIQQQKEKEFRNQDNYWQKRLQDLEQKHSEINNIINAEYKKAAEQLNANDKD 136
Query: 117 YKLPNPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCL 159
+PC + CY+++ K+ L CS+ V F+ C+
Sbjct: 137 GINAQDTIQPCKSNSDKVFKCYQDYPKEILNCSSLVEEFSNCV 179
>emb|CAA64402.1| unnamed protein product [Drosophila melanogaster]
Length = 223
Score = 43.9 bits (102), Expect = 0.002
Identities = 40/176 (22%), Positives = 67/176 (37%), Gaps = 27/176 (15%)
Query: 6 IQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSPLFLP 65
I IS+++V +L + + +K KP +K KP ++ P P
Sbjct: 25 IDISDDVVKRLKAGISQQAHEHAAAAEESKPVPKPTTKAAAKPAASSPAASPAPKVSSYP 84
Query: 66 AKPPV---------QPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKE 116
A P+ AD + + +++ E E + K EEN+ +K + +KE
Sbjct: 85 AAVPIYVQGGGHTISAADVQRQMNQELIKNDELWKERMAKLEENL-----KKTNTILEKE 139
Query: 117 YK-------------LPNPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCL 159
Y + K PC + L+CY+ H + LKC V F C+
Sbjct: 140 YANAVENVHKRFVSTASSHKVPPCQDLKSQLLACYRAHPGETLKCMEEVAQFRQCI 195
>ref|XP_647332.1| hypothetical protein DDB0189568 [Dictyostelium discoideum]
gi|60475427|gb|EAL73362.1| hypothetical protein
DDB0189568 [Dictyostelium discoideum]
Length = 1260
Score = 40.4 bits (93), Expect = 0.019
Identities = 31/125 (24%), Positives = 55/125 (43%), Gaps = 23/125 (18%)
Query: 5 TIQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSPLFL 64
T + ++L NQL +P P K +K +KE+++ + KP+ P + P
Sbjct: 777 TPSLLSQLTNQLKKEPKPPKP-----QKESKESKESKESKESKPQKPQKQAKPPKEP--- 828
Query: 65 PAKPPVQPADPEIDGIRSVLRESEKVLESLQK-------QEENMLQEVTQKAKDLHDKEY 117
KPP P P+I ++ +K +E +Q Q + +LQ+ Q+ +
Sbjct: 829 --KPPKLPKQPKIS------KKQQKQMEQIQHYQNQQRIQHQQILQQQQQQQQLFEQSSQ 880
Query: 118 KLPNP 122
LP+P
Sbjct: 881 ILPSP 885
>gb|AAY29695.1| unknown protein short splice variant [Theileria lestoquardi]
gi|63079803|gb|AAY29693.1| unknown protein short splice
variant [Theileria lestoquardi]
Length = 638
Score = 39.7 bits (91), Expect = 0.032
Identities = 25/111 (22%), Positives = 50/111 (44%), Gaps = 10/111 (9%)
Query: 20 PVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWP-----VQSPLFLPAKPPVQPAD 74
P+PK + + ++ K KP++K GK + P P ++P+ + +
Sbjct: 188 PIPKPRSKPDKDKGQSPIPKPRTKPVGKGKPVPKPATPQKPKRTKTPVISSGTVEPKETE 247
Query: 75 PEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLPNPKPE 125
PE + +S++ ++ + +E + +K K+ DKE +P P PE
Sbjct: 248 PEPEK-----HDSQEDKDTKETEEPKDTEPEPEKPKETEDKEETVPEPVPE 293
Score = 31.6 bits (70), Expect = 8.8
Identities = 26/93 (27%), Positives = 38/93 (39%), Gaps = 15/93 (16%)
Query: 35 KETEKPQSKVTGK-PENAAAPGWPVQSPLFLPAKPPVQPADPEIDGIRSVLRESEKVLES 93
KETE P+ K K PE P P+ SP P P PE +
Sbjct: 449 KETEGPKDKKDEKEPETVPEPETPI-SPGIAPEPQPQPEEQPEEP-------------KD 494
Query: 94 LQKQEENMLQEVTQKAKDLHDKEYKLPNPKPEP 126
K+EE + + V ++ KD + + + +PEP
Sbjct: 495 QDKEEETVPEPVPEEPKDTEPEPEEPKDTEPEP 527
>gb|AAY29694.1| unknown protein long splice variant [Theileria lestoquardi]
gi|63079801|gb|AAY29692.1| unknown protein long splice
variant [Theileria lestoquardi]
Length = 884
Score = 39.7 bits (91), Expect = 0.032
Identities = 25/111 (22%), Positives = 50/111 (44%), Gaps = 10/111 (9%)
Query: 20 PVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWP-----VQSPLFLPAKPPVQPAD 74
P+PK + + ++ K KP++K GK + P P ++P+ + +
Sbjct: 188 PIPKPRSKPDKDKGQSPIPKPRTKPVGKGKPVPKPATPQKPKRTKTPVISSGTVEPKETE 247
Query: 75 PEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLPNPKPE 125
PE + +S++ ++ + +E + +K K+ DKE +P P PE
Sbjct: 248 PEPEK-----HDSQEDKDTKETEEPKDTEPEPEKPKETEDKEETVPEPVPE 293
Score = 31.6 bits (70), Expect = 8.8
Identities = 26/93 (27%), Positives = 38/93 (39%), Gaps = 15/93 (16%)
Query: 35 KETEKPQSKVTGK-PENAAAPGWPVQSPLFLPAKPPVQPADPEIDGIRSVLRESEKVLES 93
KETE P+ K K PE P P+ SP P P PE +
Sbjct: 449 KETEGPKDKKDEKEPETVPEPETPI-SPGIAPEPQPQPEEQPEEP-------------KD 494
Query: 94 LQKQEENMLQEVTQKAKDLHDKEYKLPNPKPEP 126
K+EE + + V ++ KD + + + +PEP
Sbjct: 495 QDKEEETVPEPVPEEPKDTEPEPEEPKDTEPEP 527
>gb|EAA20445.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 470
Score = 39.7 bits (91), Expect = 0.032
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 5 TIQISNELVNQLVDDPVPKKKIRRNRRKVA---KETEKPQSKVTGKPENAAAPGWPVQSP 61
T I EL + + KK++ +++V +E E Q +V K + + V+S
Sbjct: 181 TEHIKKELEGKNKEVEDKKKEVESKQKEVESKQREVESKQKEVESKQKEVESKQKEVESK 240
Query: 62 LFLPAKPPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLPN 121
+ V+ E++ + + +K +ES QK+ E+ +EV K KD+ ++E +
Sbjct: 241 -----QKEVETKQKEVESKQKEVETQQKEVESKQKEVESKQKEVESKQKDIENREKESKE 295
Query: 122 PKPE 125
K E
Sbjct: 296 TKVE 299
Score = 32.7 bits (73), Expect = 4.0
Identities = 21/102 (20%), Positives = 49/102 (47%), Gaps = 8/102 (7%)
Query: 23 KKKIRRNRRKVA---KETEKPQSKVTGKPENAAAPGWPVQSPLFLPAKPPVQPADPEIDG 79
+K++ +R+V KE E Q +V K + + V++ + V+ E++
Sbjct: 206 QKEVESKQREVESKQKEVESKQKEVESKQKEVESKQKEVETK-----QKEVESKQKEVET 260
Query: 80 IRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLPN 121
+ + +K +ES QK+ E+ +++ + K+ + + + PN
Sbjct: 261 QQKEVESKQKEVESKQKEVESKQKDIENREKESKETKVETPN 302
>sp|Q92794|MYST3_HUMAN MYST histone acetyltransferase 3 (Runt-related transcription factor
binding protein 2) (Monocytic leukemia zinc finger
protein) (Zinc finger protein 220)
gi|5803098|ref|NP_006757.1| MYST histone
acetyltransferase (monocytic leukemia) 3 [Homo sapiens]
gi|1517914|gb|AAC50662.1| monocytic leukaemia zinc finger
protein
Length = 2004
Score = 39.3 bits (90), Expect = 0.042
Identities = 27/94 (28%), Positives = 47/94 (49%), Gaps = 5/94 (5%)
Query: 6 IQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSPLFLP 65
IQ S E V D P+P++ R+ ++ E E+ + G+ E+AA+ P SP
Sbjct: 1204 IQESEETVEPKEDMPLPEE--RKEEEEMQAEAEEAEE---GEEEDAASSEVPAASPADSS 1258
Query: 66 AKPPVQPADPEIDGIRSVLRESEKVLESLQKQEE 99
P + +PE++ R SE+ +S ++Q+E
Sbjct: 1259 NSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQE 1292
>emb|CAH73142.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 140kDa (TAF3)(TAF140,TAFII140) [Homo sapiens]
gi|55662526|emb|CAH73451.1| TAF3 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 140kDa
(TAF3)(TAF140,TAFII140) [Homo sapiens]
gi|55958032|emb|CAI15661.1| TAF3 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 140kDa
(TAF3)(TAF140,TAFII140) [Homo sapiens]
Length = 929
Score = 38.9 bits (89), Expect = 0.055
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 6 IQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWP-------V 58
+++ + LV + + KKK R +K + EK + K G+ + AP P +
Sbjct: 602 VKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKEL 661
Query: 59 QSPLFLPAK--------PPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAK 110
PLF PA P + P PE + E EKV E +K+++ ++ +K K
Sbjct: 662 ALPLFSPATASRVPAMLPSLLPVLPE-----KLFEEKEKVKEKEKKKDKKEKKKKKEKEK 716
Query: 111 DLHDKE 116
+ +KE
Sbjct: 717 EKKEKE 722
>emb|CAE06856.1| putative chromosome segregation protein, SMC ATPase superfamily
[Synechococcus sp. WH 8102] gi|33864877|ref|NP_896436.1|
putative chromosome segregation protein, SMC ATPase
superfamily [Synechococcus sp. WH 8102]
Length = 1203
Score = 38.9 bits (89), Expect = 0.055
Identities = 22/71 (30%), Positives = 39/71 (53%)
Query: 73 ADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLPNPKPEPCIAERL 132
A+ E+ R L+++E LE L+++ E +++E A L + E LP+P+PE RL
Sbjct: 928 AEAEVGRQRQALQQAEWNLERLKEEREGLIEEQRSGAVRLQEMEQALPDPQPEIPEELRL 987
Query: 133 ATLSCYKEHIK 143
A L + ++
Sbjct: 988 AGLEALQADLQ 998
>emb|CAC34475.1| TAFII140 protein [Homo sapiens]
Length = 727
Score = 38.9 bits (89), Expect = 0.055
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 6 IQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWP-------V 58
+++ + LV + + KKK R +K + EK + K G+ + AP P +
Sbjct: 602 VKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKEL 661
Query: 59 QSPLFLPAK--------PPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAK 110
PLF PA P + P PE + E EKV E +K+++ ++ +K K
Sbjct: 662 ALPLFSPATASRVPAMLPSLLPVLPE-----KLFEEKEKVKEKEKKKDKKEKKKKKEKEK 716
Query: 111 DLHDKE 116
+ +KE
Sbjct: 717 EKKEKE 722
>ref|XP_327216.1| predicted protein [Neurospora crassa] gi|28920680|gb|EAA30041.1|
predicted protein [Neurospora crassa]
Length = 2221
Score = 38.5 bits (88), Expect = 0.072
Identities = 21/57 (36%), Positives = 31/57 (53%), Gaps = 1/57 (1%)
Query: 20 PVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSPLFLPAKPPVQPADPE 76
P + RR RR K + P ++ GK + P P QSP F P++PP+QP+ P+
Sbjct: 1945 PSKLRSRRRGRRTRPKVSLSPNPRLFGKG-TSPDPLQPSQSPHFQPSEPPLQPSSPQ 2000
>emb|CAA44617.2| dynactin [Gallus gallus] gi|14916981|sp|P35458|DYNA_CHICK
Dynactin-1 (150 kDa dynein-associated polypeptide)
(DP-150) (DAP-150) (p150-glued)
Length = 1224
Score = 38.1 bits (87), Expect = 0.094
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 22 PKKKIRRNRRKVAKETEKPQSKVTGKPENAAA---------PGWPVQSPLFLPAKP---- 68
PKK R + T P S G +A+A P P Q+PL P P
Sbjct: 136 PKKTTARRPKPTRTPTSAPSSGTAGPSGSASASGGEMSSSEPSTPAQTPLVAPVIPSPSL 195
Query: 69 --PVQPADP----EIDGIRSVLRESEKVLESL---QKQEENMLQEVTQKAKDLHD-KEYK 118
PV P P E + +RS +R+ E+ LE+L + +++ L+E+ + L +E+K
Sbjct: 196 TSPVAPMVPSPTKEEENLRSQVRDLEEKLETLKIKRNEDKAKLKELEKYKIQLEQVQEWK 255
Query: 119 LPNPKPEPCIAERLATLSCYKEHIKDPLK 147
+ + + RL K+ KD L+
Sbjct: 256 SKMQEQQADLQRRLKEA---KKEAKDALE 281
>gb|EAA76465.1| hypothetical protein FG09230.1 [Gibberella zeae PH-1]
gi|46134181|ref|XP_389406.1| hypothetical protein
FG09230.1 [Gibberella zeae PH-1]
Length = 198
Score = 37.4 bits (85), Expect = 0.16
Identities = 32/109 (29%), Positives = 46/109 (41%), Gaps = 7/109 (6%)
Query: 23 KKKIRRNRRKVAKETEKPQSKVTGKP-ENAAAPGWPVQSPLFLPAKPPVQPADPEIDGIR 81
K++ + +K + T + T +P + AAP P +P PA P +PA PE +
Sbjct: 26 KQEAKPAEQKPTETTPADATPATTEPTKTEAAPPAPATAPA--PAAPAAEPAKPETE--- 80
Query: 82 SVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLPNPKPEPCIAE 130
V E+ K EE T+ AK +LP P PEP E
Sbjct: 81 -VKPEAPAPTTEPAKTEEAAPAPATEPAKPEAAPATELPAPVPEPAKTE 128
>gb|AAQ13612.1| MSTP089 [Homo sapiens]
Length = 568
Score = 37.4 bits (85), Expect = 0.16
Identities = 28/108 (25%), Positives = 50/108 (45%), Gaps = 14/108 (12%)
Query: 18 DDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSPLFLPAKPPVQP--ADP 75
D P+ K ++ R+ AK+ K +++ P+ A P +P P Q DP
Sbjct: 460 DKPLSKTALKNQRKHEAKKAAKQEARSAKSPDLAPTP-----APQSTPRNTVSQSISGDP 514
Query: 76 EIDGIRSVLRESEKVLESLQKQ-------EENMLQEVTQKAKDLHDKE 116
EID L++ K +E L++Q E+N L+++ ++ L + E
Sbjct: 515 EIDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 562
>emb|CAA99864.3| Hypothetical protein F55D12.5 [Caenorhabditis elegans]
gi|44893789|emb|CAA99842.3| Hypothetical protein
F55D12.5 [Caenorhabditis elegans]
Length = 552
Score = 37.4 bits (85), Expect = 0.16
Identities = 25/90 (27%), Positives = 37/90 (40%), Gaps = 17/90 (18%)
Query: 3 EFTIQISNELVNQLVDDP-----VPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWP 57
+FT++ + E +DD VP ++ + A + KP T PE AA P W
Sbjct: 127 DFTVETNAEFNENSLDDSDEYPIVPNRQEKIEETIGAVDMRKPVETKTMSPEEAALPPWR 186
Query: 58 VQSPLF------------LPAKPPVQPADP 75
+PL +P KPP+ P P
Sbjct: 187 RMNPLNADAEWKPPPPPPMPGKPPIVPQSP 216
>ref|NP_492183.1| TGF-beta receptor/activin receptor, type I/II precursor (64.3 kD)
(1I484) [Caenorhabditis elegans]
Length = 567
Score = 37.4 bits (85), Expect = 0.16
Identities = 25/90 (27%), Positives = 37/90 (40%), Gaps = 17/90 (18%)
Query: 3 EFTIQISNELVNQLVDDP-----VPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWP 57
+FT++ + E +DD VP ++ + A + KP T PE AA P W
Sbjct: 127 DFTVETNAEFNENSLDDSDEYPIVPNRQEKIEETIGAVDMRKPVETKTMSPEEAALPPWR 186
Query: 58 VQSPLF------------LPAKPPVQPADP 75
+PL +P KPP+ P P
Sbjct: 187 RMNPLNADAEWKPPPPPPMPGKPPIVPQSP 216
>gb|AAF68099.1| PspA [Streptococcus pneumoniae]
Length = 255
Score = 37.4 bits (85), Expect = 0.16
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 14/125 (11%)
Query: 2 GEFTIQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQSP 61
GE++ LV +K + +K E EKP + PEN A P +P
Sbjct: 128 GEYSALYLEAAEKDLVAKKAELEKTEADLKKAVNEPEKPAEE----PENPAPAPKPAPAP 183
Query: 62 LFLPAKPPVQPAD-PEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLP 120
P KP PA PE ++V E ++ E +TQ+ +K P
Sbjct: 184 Q--PEKPAPAPAPKPEKSA-------DQQVEEDYARRSEEEYNRLTQQQPPKAEKPAPAP 234
Query: 121 NPKPE 125
PKPE
Sbjct: 235 VPKPE 239
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 295,993,972
Number of Sequences: 2540612
Number of extensions: 12628042
Number of successful extensions: 60160
Number of sequences better than 10.0: 439
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 390
Number of HSP's that attempted gapping in prelim test: 59643
Number of HSP's gapped (non-prelim): 806
length of query: 168
length of database: 863,360,394
effective HSP length: 118
effective length of query: 50
effective length of database: 563,568,178
effective search space: 28178408900
effective search space used: 28178408900
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0126.13