BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0125.16
(229 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN29946.1| conserved hypothetical protein [Brucella suis 133... 42 0.013
gb|AAL52142.1| Kinesin-like protein [Brucella melitensis 16M] gi... 42 0.013
gb|EAM76033.1| hypothetical protein KradDRAFT_3161 [Kineococcus ... 40 0.066
gb|AAH80060.1| MGC84026 protein [Xenopus laevis] 40 0.066
gb|AAX46696.1| hypothetical protein MGC2941 [Bos taurus] gi|6679... 39 0.11
gb|EAL21208.1| hypothetical protein CNBD2640 [Cryptococcus neofo... 39 0.15
gb|AAW43269.1| conserved hypothetical protein [Cryptococcus neof... 39 0.15
ref|XP_342109.2| PREDICTED: similar to Ring finger protein 8 [Ra... 38 0.19
ref|XP_581373.1| PREDICTED: similar to ubiquitin-conjugating enz... 38 0.19
gb|AAR29896.1| putative histidine kinase HHK17p [Cochliobolus he... 37 0.33
gb|AAK64577.1| beclin1-like protein [Triticum aestivum] 37 0.33
ref|NP_960427.1| hypothetical protein MAP1493c [Mycobacterium av... 37 0.33
gb|AAL87662.1| dynamin-like protein [Giardia intestinalis] gi|29... 37 0.43
ref|XP_546583.1| PREDICTED: similar to MGC2941 protein [Canis fa... 37 0.43
emb|CAG83649.1| unnamed protein product [Yarrowia lipolytica CLI... 37 0.43
ref|XP_472514.1| OSJNBa0011E07.9 [Oryza sativa (japonica cultiva... 37 0.43
gb|EAK84054.1| hypothetical protein UM03053.1 [Ustilago maydis 5... 37 0.43
emb|CAE70208.1| Hypothetical protein CBG16684 [Caenorhabditis br... 37 0.43
gb|AAH02509.1| MGC2941 protein [Homo sapiens] gi|22760424|dbj|BA... 37 0.56
ref|ZP_00397682.1| hypothetical protein DgeoDRAFT_2935 [Deinococ... 37 0.56
>gb|AAN29946.1| conserved hypothetical protein [Brucella suis 1330]
gi|23501904|ref|NP_698031.1| hypothetical protein BR1024
[Brucella suis 1330]
Length = 1557
Score = 42.0 bits (97), Expect = 0.013
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 84 VRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKRE 143
V G G P S P++S P+ ++A V AP+APL TDVA SR VE +
Sbjct: 1349 VDVGEGRADRPVSRPAASR----PAPVQAPVRAPIAPLAQ-----TDVAVRSRPVEAPNQ 1399
Query: 144 PVVPSASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDVEMGST 186
P+AS RG+ +LL R E+ + + V+ +T
Sbjct: 1400 KPAPAASAE----KPRGWVSDLLARASREEEEAAQPKVQPAAT 1438
>gb|AAL52142.1| Kinesin-like protein [Brucella melitensis 16M]
gi|17987244|ref|NP_539878.1| Kinesin-like protein
[Brucella melitensis 16M] gi|25525327|pir||AC3372
kinesin-like protein [imported] - Brucella melitensis
(strain 16M)
Length = 1326
Score = 42.0 bits (97), Expect = 0.013
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 84 VRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKRE 143
V G G P S P++S P+ ++A V AP+APL TDVA SR VE +
Sbjct: 1118 VDVGEGRADRPVSRPAASR----PAPVQAPVRAPIAPLAQ-----TDVAVRSRPVEAPNQ 1168
Query: 144 PVVPSASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDVEMGST 186
P+AS RG+ +LL R E+ + + V+ +T
Sbjct: 1169 KPAPAASAE----KPRGWVSDLLARASREEEEAAQPKVQPAAT 1207
>gb|EAM76033.1| hypothetical protein KradDRAFT_3161 [Kineococcus radiotolerans
SRS30216]
Length = 701
Score = 39.7 bits (91), Expect = 0.066
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Query: 67 TRGVLRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAV 126
T GV++R S P RCG S+SD D S + A + AP P V
Sbjct: 560 TSGVVQRASRSATAPAGERCG------------STSDHVDGSRV-AGLTAPGEPGAGARV 606
Query: 127 D--LTDVASSSR--LVEPKREPVVPSASRRFSFTPSRG 160
+ L D ++R L +P R P+A RR F P RG
Sbjct: 607 NPGLLDAGQTARHRLPDPPRGRTTPAADRRRPFVPGRG 644
>gb|AAH80060.1| MGC84026 protein [Xenopus laevis]
Length = 550
Score = 39.7 bits (91), Expect = 0.066
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 92 RGPPSPPSSSSDEEDPSEI-EADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVPSAS 150
RGPP+P ++SS + + E + P P V A S E VPS+
Sbjct: 309 RGPPNPTTNSSSYPEKKPVKEKPGNKPERPKTENEVKKPTGAEDSNSDEEGSSESVPSSP 368
Query: 151 RRFS----------FTPSRGYRVELLVRVVEEDVLSEEVDVEMGSTRVVRRIVRKEVMDL 200
S F P + + L R + ED+ SEE D + S+ +++ ++ +
Sbjct: 369 SNSSSSSDSTSESDFEPPQNHSQGPL-RSMVEDLQSEESDDD--SSCGDEAVLKNKMSNR 425
Query: 201 DTEMITVDSDSDTDVDNYSPS 221
D+ M DSDSD+ D+ +PS
Sbjct: 426 DSRMSLSDSDSDSSDDSCAPS 446
>gb|AAX46696.1| hypothetical protein MGC2941 [Bos taurus]
gi|66792930|ref|NP_001019741.1| hypothetical protein
LOC539774 [Bos taurus]
Length = 397
Score = 38.9 bits (89), Expect = 0.11
Identities = 33/118 (27%), Positives = 48/118 (39%), Gaps = 20/118 (16%)
Query: 71 LRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEA----DVDAPVAPLPATAV 126
L++ E LPP PG R PPS S +EE+ E+ A + APV P P
Sbjct: 223 LKKAERGDRLPP-----PGPPRAPPSDTDSEEEEEEEEEMAAMVGGEAPAPVLPTP---- 273
Query: 127 DLTDVASSSRLVEPKREPVVPSASRRFSFTPSR----GYRVELLVRVVEEDVLSEEVD 180
+ V P+ P S+ T + E +RV++ED++ E D
Sbjct: 274 ---EAPRPPATVHPEGAPPTDGESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGD 328
>gb|EAL21208.1| hypothetical protein CNBD2640 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1843
Score = 38.5 bits (88), Expect = 0.15
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 87 GPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVV 146
GP GR P S+ + +E AD +AP A T+ + + S + L +R P++
Sbjct: 1097 GPSGGRSPQRRRSARLNPPGDAESAAD-EAPTAAARVTSPSSSTLLSPTTLTTSERRPIL 1155
Query: 147 PSASRRFSFTPSRGYRVE-----LLVRVVEEDVL----SEEV---DVEMGSTRVVRRIVR 194
P+ S F Y + ++ +V+EED+ SE V DV +RV + +
Sbjct: 1156 PAMSMGMDFDDEEDYSEDEYDAPVIDQVMEEDLAATGPSESVVNMDVTADGSRVEAKTPQ 1215
Query: 195 KEVMDLDTEMITVDSDSDTDVDNYSPS 221
+ + I V S +PS
Sbjct: 1216 GTRIATPQQNIPVTGPSTATFSRIAPS 1242
>gb|AAW43269.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|58266840|ref|XP_570576.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1843
Score = 38.5 bits (88), Expect = 0.15
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 87 GPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVV 146
GP GR P S+ + +E AD +AP A T+ + + S + L +R P++
Sbjct: 1097 GPSGGRSPQRRRSARLNPPGDAESAAD-EAPTAAARVTSPSSSTLLSPTTLTTSERRPIL 1155
Query: 147 PSASRRFSFTPSRGYRVE-----LLVRVVEEDVL----SEEV---DVEMGSTRVVRRIVR 194
P+ S F Y + ++ +V+EED+ SE V DV +RV + +
Sbjct: 1156 PAMSMGMDFDDEEDYSEDEYDAPVIDQVMEEDLAATGPSESVVNMDVTADGSRVEAKTPQ 1215
Query: 195 KEVMDLDTEMITVDSDSDTDVDNYSPS 221
+ + I V S +PS
Sbjct: 1216 GTRIATPQQNIPVTGPSTATFSRIAPS 1242
>ref|XP_342109.2| PREDICTED: similar to Ring finger protein 8 [Rattus norvegicus]
Length = 637
Score = 38.1 bits (87), Expect = 0.19
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 87 GPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEP------ 140
GP R P + SS E P ++ +A PL L + +S R P
Sbjct: 257 GPSDLRCPLAKGSSKPAE--PEKLHGKGEAASQPLGCLCPTLASLEASERTAGPHACSTL 314
Query: 141 ---------KREPVVPSASRR----FSFTPSRGYRVELLVRVVEEDVLSEEVDVEMGSTR 187
K++ PSAS+ F T SR +++ ++ + VL+ + GS++
Sbjct: 315 PKVLELYPKKQKACSPSASQSSLELFKMTMSRMLKLKTQMQEKQIAVLNVKRQARKGSSK 374
Query: 188 VVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPSDEEEEEEL 229
V R+ KE+ DL +++ + V+ + +EEE+ L
Sbjct: 375 KVVRM-EKELRDLQSQLYAEQAQQQARVEQLEKTFQEEEQHL 415
>ref|XP_581373.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2Q, partial
[Bos taurus]
Length = 546
Score = 38.1 bits (87), Expect = 0.19
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 21/223 (9%)
Query: 23 PSGGIRFKLVDRHAPTAWVIDPVDHRATYRGRVMED---RTDERGRLTRGVLRRMELSFN 79
P GG R + +H P R T +++E R ER R+ L + F
Sbjct: 42 PDGGRRAQ-TRKHVPAQVAPGSTGRRFTRELKLLESIFHRGHERFRIASACLDELSCEFL 100
Query: 80 LPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDV-------- 131
L + G G GP PP S DP I ++ A VD++
Sbjct: 101 LAGAGGAGAGAAPGPHLPPRGSV-PGDPVRIHCNITLVAATPILFPVDISSCPELLPFLL 159
Query: 132 -ASSSRLVEPKRE--PVVPSASRRFSFTPSRGYRVELLVRVVEEDV----LSEEVDVEMG 184
+ RL K E P VP S P+ ++ L R++ + L + DVEM
Sbjct: 160 PEAIYRLCPWKEESYPAVPPIWXGESDDPNLAALLQHLKRIISDLCKLYNLPQHPDVEML 219
Query: 185 STRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPSDEEEEE 227
+ +E + + E + D++ D+D+Y +EE E
Sbjct: 220 DQPLPAEQCTQEDVSSEDEDEEMPEDTE-DLDHYEMKEEEPAE 261
>gb|AAR29896.1| putative histidine kinase HHK17p [Cochliobolus heterostrophus]
Length = 883
Score = 37.4 bits (85), Expect = 0.33
Identities = 37/138 (26%), Positives = 58/138 (41%), Gaps = 18/138 (13%)
Query: 53 GRVMEDRTDERGRLTRGVLRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEA 112
G + T G T + RM L +P G GP +PP +S D + E
Sbjct: 647 GEICSRPTTPFGSPTPSIKSRMSLDPEVPRL-----DLGHGPITPPLNS----DSFKNEP 697
Query: 113 DVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVPS-------ASRRFSFTPSRGYRVEL 165
+ APV PA VD +++ LV P+R P +S + P G ++ L
Sbjct: 698 ERQAPVT--PAITVDKASPPTNAGLVTPRRTSSPPRRHTARALSSEKEVTPPDLGNQLPL 755
Query: 166 LVRVVEEDVLSEEVDVEM 183
+ VV+++ ++ V V M
Sbjct: 756 NILVVDDNAINRRVLVSM 773
>gb|AAK64577.1| beclin1-like protein [Triticum aestivum]
Length = 441
Score = 37.4 bits (85), Expect = 0.33
Identities = 39/158 (24%), Positives = 64/158 (39%), Gaps = 26/158 (16%)
Query: 92 RGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDL----TDVASSSRLVEPKREPVVP 147
R PP PPS+++ +P++ ++ LP A + T + L P P
Sbjct: 23 RIPPRPPSAAARHVEPNQSTRAIEGSYIMLPPAAASIYKTSTSEGGGAHLSPPNVNSTSP 82
Query: 148 SASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDVE----MGSTRVVRRIVRKEVMDLDTE 203
S F S V +L R E + S + VE + RV+ + KE+ D++T+
Sbjct: 83 SPGNNSGFHSS----VTVLKRAFE--IASSQTQVEQPLCLECMRVLSDKMDKEIEDVNTD 136
Query: 204 MITVDSD------------SDTDVDNYSPSDEEEEEEL 229
+ D+ S+TD EEEE++L
Sbjct: 137 IKAYDACLQRLEQESYNILSETDFLKEKEKIEEEEKKL 174
>ref|NP_960427.1| hypothetical protein MAP1493c [Mycobacterium avium subsp.
paratuberculosis str. k10] gi|41395944|gb|AAS03810.1|
hypothetical protein MAP1493c [Mycobacterium avium
subsp. paratuberculosis str. k10]
Length = 616
Score = 37.4 bits (85), Expect = 0.33
Identities = 37/133 (27%), Positives = 54/133 (39%), Gaps = 19/133 (14%)
Query: 82 PSVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPK 141
P V C PG + P SPP + + E+D S PL + D T A +R + P
Sbjct: 420 PRVECDPGPQQLPSSPPPNDAVEQDRS----------TPLIPSIPDATKAA--ARWIRPL 467
Query: 142 REPVVPSASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDVEMGSTRVVRRIVRKEVMDLD 201
P+V +R T R R V E V+ E ++ T +RR + V
Sbjct: 468 APPLV---ARMMDTTTHRLTHPLRTARQVFEGVVEETEEI----TFALRRTRKVTVNSQA 520
Query: 202 TEMITVDSDSDTD 214
T+ + D DT+
Sbjct: 521 TQTASADPTEDTE 533
>gb|AAL87662.1| dynamin-like protein [Giardia intestinalis]
gi|29245695|gb|EAA37320.1| GLP_300_9766_11964 [Giardia
lamblia ATCC 50803]
Length = 732
Score = 37.0 bits (84), Expect = 0.43
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 87 GPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSS--RLVEPKREP 144
GPG GP P +E P +I+A P++ VDL S+ R++ K E
Sbjct: 596 GPGGPGGPGGPGPQQFNESVPEKIKA--QGPLSEAEKLGVDLIPRLMSAYYRVIRKKIED 653
Query: 145 VVPSASRRFSFTPSRGYRVELLVRVVE-----EDVLSEEVDVEMGSTRVVRRIVRKEVMD 199
VP A F S E+LVR + ED+L E+ ++ +R+ +E++D
Sbjct: 654 SVPKACIAFLVKASMNQLQEVLVRNLYSGDKIEDLLCEDPSIK------EKRVACRELVD 707
Query: 200 L 200
+
Sbjct: 708 V 708
>ref|XP_546583.1| PREDICTED: similar to MGC2941 protein [Canis familiaris]
Length = 492
Score = 37.0 bits (84), Expect = 0.43
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 39/173 (22%)
Query: 21 VSPSGGIRFKLVDRHAPTAWVIDPVDHRATYRGRVMEDRTDERGRLTRGVLRRMELSFNL 80
+ P GG F ++ R P P D R R+ + + + + RG L
Sbjct: 277 LGPGGGAGFGVLRRPRPA-----PGDGEK--RSRIKKSKKRKLKKADRGD--------RL 321
Query: 81 PPSVRCGPGTGRGPPSPPSSSSDEEDPSEIE---------ADVDAPVAPLPATAVDLTDV 131
PP PG R PPS S +EE+ E E + APV P P A
Sbjct: 322 PP-----PGPPRAPPSDTDSEEEEEEEEEEEEEDMVAMVGGEAPAPVLPTPPEA------ 370
Query: 132 ASSSRLVEPKREPVVPSASRRFSFTPSR----GYRVELLVRVVEEDVLSEEVD 180
+ V P+ P S+ T + E +RV++ED++ E D
Sbjct: 371 SRPPATVHPEGAPPTDGESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGD 423
>emb|CAG83649.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50543120|ref|XP_499726.1| hypothetical protein
[Yarrowia lipolytica]
Length = 701
Score = 37.0 bits (84), Expect = 0.43
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 170 VEEDVLSEEVDVEMGSTRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPSDEEEEEE 228
V+++V E+VD E V+ V++E +DLD V D D D +EEEEEE
Sbjct: 221 VKDEVKDEDVDTE------VKDEVKEEDLDLDESNADVAEGDDDDEDEIEVDEEEEEEE 273
>ref|XP_472514.1| OSJNBa0011E07.9 [Oryza sativa (japonica cultivar-group)]
gi|38346363|emb|CAE04200.2| OSJNBa0011E07.9 [Oryza
sativa (japonica cultivar-group)]
Length = 600
Score = 37.0 bits (84), Expect = 0.43
Identities = 24/69 (34%), Positives = 28/69 (39%), Gaps = 4/69 (5%)
Query: 94 PPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPV---VPSAS 150
PPSPP + S P + +P P P A S R P R P PS S
Sbjct: 308 PPSPPQAQSPPPSPRQSPL-APSPAPPPPPRAPAAKSAPSGPRATTPPRAPATKSTPSRS 366
Query: 151 RRFSFTPSR 159
R + TPSR
Sbjct: 367 RPYEPTPSR 375
>gb|EAK84054.1| hypothetical protein UM03053.1 [Ustilago maydis 521]
gi|49072762|ref|XP_400668.1| hypothetical protein
UM03053.1 [Ustilago maydis 521]
Length = 1090
Score = 37.0 bits (84), Expect = 0.43
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 77 SFNLPPSVRCGPG-TGRGPPSPPSSSSDEE----DPSEIEADVDAPVAPLPATAVDLTDV 131
SF+ PP P T SPP+SS+ DP+ + D+ PA + LTD+
Sbjct: 101 SFSPPPPSSSSPSATVSVSSSPPTSSTIHHATVSDPTTEDIDMAVSTVSHPAPDLVLTDL 160
Query: 132 ASSSRLVEPKREPVVPSASRRFSFTP 157
+SS+ + P +P S + TP
Sbjct: 161 GASSKRITPLASATIPHNSPQLEGTP 186
>emb|CAE70208.1| Hypothetical protein CBG16684 [Caenorhabditis briggsae]
Length = 1652
Score = 37.0 bits (84), Expect = 0.43
Identities = 35/128 (27%), Positives = 58/128 (44%), Gaps = 5/128 (3%)
Query: 103 DEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVP-SASRRFSFTPSRGY 161
D+EDP E + P P T + +A S++ R+P VP S +RR + +R
Sbjct: 409 DDEDPITDEVGDSSSAKPTPTTGNRRSGLARSAK--RAPRQPRVPRSTNRRTAGAITRAQ 466
Query: 162 RVELLVRVVEEDVLSEEVDVEMGSTRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPS 221
V LV + +++ ++ + GS + E+ D ++ DS D+
Sbjct: 467 AVPKLVEDLGDEIELDDEEGSNGSNEKGSK-APSEMRDASPGE-NMEVDSPEGQDDLDIV 524
Query: 222 DEEEEEEL 229
DEEEEEE+
Sbjct: 525 DEEEEEEV 532
>gb|AAH02509.1| MGC2941 protein [Homo sapiens] gi|22760424|dbj|BAC11192.1| unnamed
protein product [Homo sapiens]
Length = 403
Score = 36.6 bits (83), Expect = 0.56
Identities = 43/168 (25%), Positives = 66/168 (38%), Gaps = 29/168 (17%)
Query: 21 VSPSGGIRFKLVDRHAPTAWVIDPVDHRATYRGRVMEDRTDERGRLTRGVLRRMELSFNL 80
+ P G F ++ R PT P D R R+ + + + L++ E L
Sbjct: 188 LGPGAGAGFGVLRRPRPT-----PGDGEK--RSRIKKSKKRK--------LKKAERGDRL 232
Query: 81 PPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPV----APLPATAVDLTDVASSSR 136
PP PG + PPS S +EE+ E E + A V AP+P +
Sbjct: 233 PP-----PGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGGEAPVPVLPTP-PEAPRPPA 286
Query: 137 LVEPKREPVVPSASRRFSFTPSR----GYRVELLVRVVEEDVLSEEVD 180
V P+ P S S+ T + E +RV++ED++ E D
Sbjct: 287 TVHPEGVPPADSESKEVGSTETSQDGDASSSEGEMRVMDEDIMVESGD 334
>ref|ZP_00397682.1| hypothetical protein DgeoDRAFT_2935 [Deinococcus geothermalis DSM
11300] gi|66780706|gb|EAL81686.1| hypothetical protein
DgeoDRAFT_2935 [Deinococcus geothermalis DSM 11300]
Length = 302
Score = 36.6 bits (83), Expect = 0.56
Identities = 22/83 (26%), Positives = 40/83 (47%)
Query: 88 PGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVP 147
PG PS PS+ + E P ++ +A AP+PA A + A ++R+ + E ++
Sbjct: 151 PGERLAVPSAPSAPAAEPAPKVPQSAAEAGSAPVPAPAAVPAEAAPATRVASAEAESILA 210
Query: 148 SASRRFSFTPSRGYRVELLVRVV 170
+ R + R++LL V+
Sbjct: 211 GLAARANAVSGLVSRLQLLAVVL 233
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,329,974
Number of Sequences: 2540612
Number of extensions: 19023059
Number of successful extensions: 104775
Number of sequences better than 10.0: 302
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 104072
Number of HSP's gapped (non-prelim): 703
length of query: 229
length of database: 863,360,394
effective HSP length: 124
effective length of query: 105
effective length of database: 548,324,506
effective search space: 57574073130
effective search space used: 57574073130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0125.16