BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0122.9
(460 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563654.1| glycoside hydrolase family 28 protein / polygal... 618 e-175
ref|NP_192098.2| glycoside hydrolase family 28 protein / polygal... 553 e-156
gb|AAM20001.1| putative polygalacturonase PG1 [Arabidopsis thali... 543 e-153
gb|AAK95305.1| At1g48100/F21D18_17 [Arabidopsis thaliana] 543 e-153
ref|NP_176064.1| glycoside hydrolase family 28 protein / polygal... 533 e-150
ref|XP_476272.1| unknown protein [Oryza sativa (japonica cultiva... 533 e-150
gb|AAF79535.1| F21D18.18 [Arabidopsis thaliana] gi|25405916|pir|... 533 e-150
emb|CAB80682.1| putative polygalacturonidase [Arabidopsis thalia... 526 e-148
ref|NP_908534.1| putative polygalacturonase-like protein [Oryza ... 518 e-145
dbj|BAD86981.1| putative polygalacturonase PG1 [Oryza sativa (ja... 514 e-144
ref|NP_908736.1| putative polygalacturonase PG2 [Oryza sativa (j... 483 e-135
dbj|BAD54709.1| putative polygalacturonase PG2 [Oryza sativa (ja... 483 e-135
emb|CAB87632.1| polygalacturonase-like protein [Arabidopsis thal... 384 e-105
ref|NP_564758.2| polygalacturonase, putative / pectinase, putati... 383 e-105
gb|AAN18178.1| At1g60590/F8A5_12 [Arabidopsis thaliana] gi|16974... 383 e-105
gb|AAD46483.1| polygalacturonase PG1 [Glycine max] 372 e-101
dbj|BAD68931.1| polygalacturonase PG1-like [Oryza sativa (japoni... 367 e-100
gb|AAD46484.1| polygalacturonase PG2 [Glycine max] 365 2e-99
gb|AAO24262.1| putative style polygalacturonase [Turnera subulata] 351 3e-95
dbj|BAA88472.1| polygalacturonase [Cucumis sativus] 333 5e-90
>ref|NP_563654.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis
thaliana] gi|25406725|pir||B86155 probable
polygalacturonase [imported] - Arabidopsis thaliana
gi|9972390|gb|AAG10640.1| Putative polygalacturonase
[Arabidopsis thaliana]
Length = 491
Score = 618 bits (1594), Expect = e-175
Identities = 301/488 (61%), Positives = 369/488 (74%), Gaps = 28/488 (5%)
Query: 1 MLRMKHSHILPLAFCIFSLTLFLSAQARHHSHTKHNKHS-HSHKSTKTSPP--------- 50
ML ++ L F LTL ++AR+H H + +KH+ H+H S+K PP
Sbjct: 1 MLTSTYNRNQVLGFMTLILTLMSLSEARNHHHKEKHKHNNHNHHSSKPKPPSSSISQPPT 60
Query: 51 PPP----------------HNCYNATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSEL 94
PPP + GI++V +GAVGDG DDT +FK AWD++C +E
Sbjct: 61 PPPGPPDSPAPSLPPSPSDDPADDNNGIYNVRKYGAVGDGETDDTEAFKTAWDSSCNNEN 120
Query: 95 -PGNVILVPKGFSFIIQSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYR 153
+V+LVP G++F+IQSTIFTGPC+ F+V+GT++ PDGPESWP NIS+ QWLVFYR
Sbjct: 121 NTDSVLLVPYGYTFMIQSTIFTGPCRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYR 180
Query: 154 INGMSLEGSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLR 213
+NGM+L+G G+IDGRG+KWWDLPCKPHR + GPCDSP+A+RFFMSSNL V+GL+
Sbjct: 181 VNGMALKGEGVIDGRGQKWWDLPCKPHRSVNKSAIVTGPCDSPIALRFFMSSNLRVEGLQ 240
Query: 214 VKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSI 273
+KNSPQF+FRFDGC VHVES++ITAP LSPNTDGIHIEN+N V IYNS+ISNGDDCVSI
Sbjct: 241 IKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSI 300
Query: 274 GSGCYDVDIKNITCGP-GHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGG 332
GSG YDVDI+N+TCGP GHGISIGSLG HNSRACVSNITVRDS++K +DNGVRIKTWQGG
Sbjct: 301 GSGSYDVDIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGG 360
Query: 333 SGSVSGVKFSNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLP 392
SGSVSGV F+NI + +VRNPIIIDQ+YC+T+ C NKTSAVFVS+I Y IKGTYD+RS P
Sbjct: 361 SGSVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRSPP 420
Query: 393 MRFACSDSIPCTHLALSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTPQSW 452
M F CSD++PCT+L LSDIELLPA+G+I DPFCWNAYG + L+IPPV CLM P+
Sbjct: 421 MHFGCSDAVPCTNLTLSDIELLPAKGEIVLDPFCWNAYGIAEELSIPPVWCLMSDPPKGL 480
Query: 453 LDHDINGC 460
++ C
Sbjct: 481 QGSLVDKC 488
>ref|NP_192098.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 468
Score = 553 bits (1424), Expect = e-156
Identities = 266/459 (57%), Positives = 338/459 (72%), Gaps = 7/459 (1%)
Query: 1 MLRMKHSHILPLAFCIFSLTLFL---SAQARHHSHTKHNKHSHSHKSTKTSPPPPPHNCY 57
ML++ IL + I +T L +AR H H S S S P
Sbjct: 1 MLKLSRDPILCITTLILIITFSLLSYGTEARLH-HQASQPPSPSPNPNDPSKSPSRSQDL 59
Query: 58 NATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSEL--PGNVILVPKGFSFIIQSTIFT 115
+ ++DV +GAVG+G+ADDTVSFK AWD+AC + +V+ VP GF+F+I+STIFT
Sbjct: 60 DHEVVYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYGFTFMIRSTIFT 119
Query: 116 GPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDL 175
GPC+ F+V+GT++P DGP+SWP ++++ QWL FYRINGM+L+G+G+IDGRG+ WWDL
Sbjct: 120 GPCRSYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYRINGMALQGAGVIDGRGQNWWDL 179
Query: 176 PCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESI 235
PCKPH+Q + T L GPC+SP A+RFFMSSN+ V+GL +KNSPQ + + DGC VH+ S+
Sbjct: 180 PCKPHQQNVNKTKLAGPCESPAALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSL 239
Query: 236 YITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGP-GHGIS 294
I +P SPNTDGIHIEN+N V+IYNS+ISNGDDCVSIG G YD+DI+NITCGP GHGIS
Sbjct: 240 RIISPPASPNTDGIHIENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGIS 299
Query: 295 IGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPII 354
IGSLG NS ACVSN+TVRDS +K ++NGVRIKTWQGGSGSVSGV F NI + VRNPII
Sbjct: 300 IGSLGEKNSHACVSNVTVRDSFIKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPII 359
Query: 355 IDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELL 414
IDQ+YC T+ C NKTSAVFV++I+Y +IKGTYD+RS PM F CS+++PCT+L LS+IELL
Sbjct: 360 IDQYYCTTKSCANKTSAVFVNDIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNIELL 419
Query: 415 PAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTPQSWL 453
P++ DI PFCWNAYG ++P +SCL S L
Sbjct: 420 PSKEDIVVGPFCWNAYGITDEFSVPLISCLKSNPSTSLL 458
>gb|AAM20001.1| putative polygalacturonase PG1 [Arabidopsis thaliana]
gi|15292729|gb|AAK92733.1| putative polygalacturonase
PG1 [Arabidopsis thaliana] gi|15221078|ref|NP_175244.1|
glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein
[Arabidopsis thaliana]
Length = 475
Score = 543 bits (1399), Expect = e-153
Identities = 256/458 (55%), Positives = 334/458 (72%), Gaps = 29/458 (6%)
Query: 25 AQARHHSHTKHNKHSHSHKSTKTSPPPPPHNCYN---------------ATG------IF 63
A+AR+H H K H PPPPP N A G +F
Sbjct: 25 ARARYHYH----KGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDSDSGCVF 80
Query: 64 DVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQGGIV 123
DVT+FGAVGDG DDT +F+ AW AC E V+L P+G F I STIF+GPC+ G+V
Sbjct: 81 DVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFKITSTIFSGPCKPGLV 138
Query: 124 FKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQG 183
F+++G LMPPDGPE WP+ +++QWLVFYR++G + G G ++G G+KWWDLPCKPHR G
Sbjct: 139 FQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR-G 197
Query: 184 PHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLS 243
P ++ GPC SP IRFFMS+N+ V+GLR++NSPQF+ +FDGC V + I I++PKLS
Sbjct: 198 PDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLS 257
Query: 244 PNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNS 303
PNTDGIH+ NT V IYNS++SNGDDC+SIG+GC DVDI+ +TCGP HGISIGSLG+HNS
Sbjct: 258 PNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNS 317
Query: 304 RACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYCITE 363
+ACVSNITVR+++++ +DNG+R+KTWQGG+GSVS + F NI+M NV N II+DQ+YC ++
Sbjct: 318 QACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSK 377
Query: 364 GCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAEGDIAHD 423
C N+TSAV V ++ Y NIKGTYDVRS P+ FACSD++ CT++ +S++ELLP EG++ D
Sbjct: 378 DCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPEEGELVDD 437
Query: 424 PFCWNAYGDLQTLTIPPVSCLMQGTPQSWLDHDIN-GC 460
PFCWNAYG +TLTIPP+ CL+ G+P +D N GC
Sbjct: 438 PFCWNAYGKQETLTIPPIDCLLDGSPVVEEAYDSNYGC 475
>gb|AAK95305.1| At1g48100/F21D18_17 [Arabidopsis thaliana]
Length = 475
Score = 543 bits (1399), Expect = e-153
Identities = 256/458 (55%), Positives = 334/458 (72%), Gaps = 29/458 (6%)
Query: 25 AQARHHSHTKHNKHSHSHKSTKTSPPPPPHNCYN---------------ATG------IF 63
A+AR+H H K H PPPPP N A G +F
Sbjct: 25 ARARYHYH----KGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDSDSGCVF 80
Query: 64 DVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQGGIV 123
DVT+FGAVGDG DDT +F+ AW AC E V+L P+G F I STIF+GPC+ G+V
Sbjct: 81 DVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFRITSTIFSGPCKPGLV 138
Query: 124 FKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQG 183
F+++G LMPPDGPE WP+ +++QWLVFYR++G + G G ++G G+KWWDLPCKPHR G
Sbjct: 139 FQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR-G 197
Query: 184 PHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLS 243
P ++ GPC SP IRFFMS+N+ V+GLR++NSPQF+ +FDGC V + I I++PKLS
Sbjct: 198 PDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLS 257
Query: 244 PNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNS 303
PNTDGIH+ NT V IYNS++SNGDDC+SIG+GC DVDI+ +TCGP HGISIGSLG+HNS
Sbjct: 258 PNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNS 317
Query: 304 RACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYCITE 363
+ACVSNITVR+++++ +DNG+R+KTWQGG+GSVS + F NI+M NV N II+DQ+YC ++
Sbjct: 318 QACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSK 377
Query: 364 GCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAEGDIAHD 423
C N+TSAV V ++ Y NIKGTYDVRS P+ FACSD++ CT++ +S++ELLP EG++ D
Sbjct: 378 DCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLPEEGELVDD 437
Query: 424 PFCWNAYGDLQTLTIPPVSCLMQGTPQSWLDHDIN-GC 460
PFCWNAYG +TLTIPP+ CL+ G+P +D N GC
Sbjct: 438 PFCWNAYGKQETLTIPPIDCLLDGSPVVEEAYDSNYGC 475
>ref|NP_176064.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|25289348|pir||A96609 probable polygalacturonase
F25P12.85 [imported] - Arabidopsis thaliana
gi|9954742|gb|AAG09093.1| Putative polygalacturonase
[Arabidopsis thaliana]
Length = 434
Score = 533 bits (1374), Expect = e-150
Identities = 247/413 (59%), Positives = 320/413 (76%), Gaps = 9/413 (2%)
Query: 43 KSTKTSPPPPPHNCYN-----ATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGN 97
+S SP P P+ YN A +FDVT+FGA+GD DDT +FKMAWD AC S P +
Sbjct: 23 QSIYLSPSPAPNPAYNDNDNIAPTVFDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKS 82
Query: 98 -VILVPKGFSFIIQSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRING 156
++LVP F F+++ T F GPC+ +V +++G ++ PDGP SWP N R QW++FYR+NG
Sbjct: 83 ALLLVPYTFCFLVKPTTFNGPCRTNLVLQIDGFIVSPDGPRSWPSNYQR-QWMMFYRVNG 141
Query: 157 MSLEGSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKN 216
+S++GSG+I+GRG+KWW+LPCKPH+ G + TT GPCDSPVAIR F SS + +QG+ N
Sbjct: 142 LSIQGSGVINGRGQKWWNLPCKPHK-GLNGTTQTGPCDSPVAIRLFQSSKVRIQGINFMN 200
Query: 217 SPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSG 276
S QF+ RFD C V V+S+ I AP SPNTDGIHIENT++V+I NSMISNGDDC+SIG+G
Sbjct: 201 SAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHNVQIRNSMISNGDDCISIGAG 260
Query: 277 CYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSV 336
C++VDIKN+TCGP HGISIGSLG+HNS+A VSNITV +S + +DNGVRIKTWQGGSGSV
Sbjct: 261 CFNVDIKNVTCGPSHGISIGSLGVHNSQAYVSNITVTNSTIWNSDNGVRIKTWQGGSGSV 320
Query: 337 SGVKFSNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFA 396
S + FSNI MVNVRNPI+IDQ+YC T C N+TSAV +S++LY NIKGTYD+RS P+ F
Sbjct: 321 SRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTSAVIISDVLYANIKGTYDLRSPPIHFG 380
Query: 397 CSDSIPCTHLALSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTP 449
CSDS+PCT+L L++++L P++G +PFCWNAYG ++ +T+PPV CL+ P
Sbjct: 381 CSDSVPCTNLTLTEVDLFPSKGQHLENPFCWNAYGSMK-ITVPPVYCLLDAPP 432
>ref|XP_476272.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|46485878|gb|AAS98503.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 504
Score = 533 bits (1373), Expect = e-150
Identities = 242/424 (57%), Positives = 316/424 (74%), Gaps = 25/424 (5%)
Query: 50 PPPPHNCYNATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFII 109
P P C +FDV FGAVGDG DDT +F+ AW AC E VI VP +F I
Sbjct: 82 PAQPEQC-----VFDVRAFGAVGDGTTDDTEAFRAAWRAACAVE--SAVISVPSDGTFTI 134
Query: 110 QSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRG 169
+T FTGPC+ G+VF+V+G LMPPDGP+ WP + +R QWLVF ++G++L G+G I+G G
Sbjct: 135 TTTTFTGPCKPGLVFQVDGVLMPPDGPDCWPPSDNRRQWLVFSNLDGLTLRGAGTIEGNG 194
Query: 170 EKWWDLPCKPHR------------------QGPHWTTLPGPCDSPVAIRFFMSSNLTVQG 211
E WW+LPCKPHR QGP+ +TL GPCDSP +RFFMS NL V+G
Sbjct: 195 EGWWNLPCKPHRLARLNTGSEFALVTLNSVQGPNGSTLRGPCDSPTLVRFFMSRNLVVEG 254
Query: 212 LRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCV 271
LRV+NSP+F+FRFDGC V V+ + I +P SPNTDGIH+ENT V IYNSMISNGDDC+
Sbjct: 255 LRVENSPEFHFRFDGCSDVRVDGLSIRSPANSPNTDGIHVENTQRVAIYNSMISNGDDCI 314
Query: 272 SIGSGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQG 331
SIG+G YDVDI+N++CGPGHGISIGSLG+HNS+ACV+N+TVR+++++ +DNG+RIKTWQG
Sbjct: 315 SIGTGSYDVDIQNVSCGPGHGISIGSLGVHNSQACVANVTVRNAVIRNSDNGLRIKTWQG 374
Query: 332 GSGSVSGVKFSNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSL 391
G GSVSG+ F + M NVRN IIIDQ+YC+ + C N+++AV V+++ Y N++G+YDVR+
Sbjct: 375 GMGSVSGINFDTVSMENVRNCIIIDQYYCLDKRCMNQSTAVHVTDVSYANVRGSYDVRAA 434
Query: 392 PMRFACSDSIPCTHLALSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTPQS 451
P+ FACSD++PCT++ +S++ELLP G++ DPFCW+AYG QT TIPP+ CL G P S
Sbjct: 435 PIHFACSDTVPCTNITMSEVELLPFSGELVDDPFCWSAYGLQQTPTIPPIYCLQDGLPDS 494
Query: 452 WLDH 455
LD+
Sbjct: 495 LLDN 498
>gb|AAF79535.1| F21D18.18 [Arabidopsis thaliana] gi|25405916|pir||C96521 protein
F21D18.18 [imported] - Arabidopsis thaliana
Length = 492
Score = 533 bits (1372), Expect = e-150
Identities = 256/475 (53%), Positives = 334/475 (69%), Gaps = 46/475 (9%)
Query: 25 AQARHHSHTKHNKHSHSHKSTKTSPPPPPHNCYN---------------ATG------IF 63
A+AR+H H K H PPPPP N A G +F
Sbjct: 25 ARARYHYH----KGRHGVTHPLPPPPPPPLETANPPDQVPSDPYPSPDPAPGDSDSGCVF 80
Query: 64 DVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQGGIV 123
DVT+FGAVGDG DDT +F+ AW AC E V+L P+G F I STIF+GPC+ G+V
Sbjct: 81 DVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFKITSTIFSGPCKPGLV 138
Query: 124 FKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQG 183
F+++G LMPPDGPE WP+ +++QWLVFYR++G + G G ++G G+KWWDLPCKPHR G
Sbjct: 139 FQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR-G 197
Query: 184 PHWTTLPGPCDSPVA-----------------IRFFMSSNLTVQGLRVKNSPQFNFRFDG 226
P ++ GPC SP IRFFMS+N+ V+GLR++NSPQF+ +FDG
Sbjct: 198 PDGSSSSGPCASPTVSLLKPNQIIKLDRFYLMIRFFMSNNIEVKGLRIQNSPQFHMKFDG 257
Query: 227 CIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNIT 286
C V + I I++PKLSPNTDGIH+ NT V IYNS++SNGDDC+SIG+GC DVDI+ +T
Sbjct: 258 CQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVT 317
Query: 287 CGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRM 346
CGP HGISIGSLG+HNS+ACVSNITVR+++++ +DNG+R+KTWQGG+GSVS + F NI+M
Sbjct: 318 CGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQM 377
Query: 347 VNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHL 406
NV N II+DQ+YC ++ C N+TSAV V ++ Y NIKGTYDVRS P+ FACSD++ CT++
Sbjct: 378 ENVLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNI 437
Query: 407 ALSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTPQSWLDHDIN-GC 460
+S++ELLP EG++ DPFCWNAYG +TLTIPP+ CL+ G+P +D N GC
Sbjct: 438 TMSEVELLPEEGELVDDPFCWNAYGKQETLTIPPIDCLLDGSPVVEEAYDSNYGC 492
>emb|CAB80682.1| putative polygalacturonidase [Arabidopsis thaliana]
gi|4558558|gb|AAD22651.1| putative polygalacturonidase
[Arabidopsis thaliana] gi|25289357|pir||C85024 probable
polygalacturonidase [imported] - Arabidopsis thaliana
Length = 452
Score = 526 bits (1354), Expect = e-148
Identities = 258/459 (56%), Positives = 328/459 (71%), Gaps = 23/459 (5%)
Query: 1 MLRMKHSHILPLAFCIFSLTLFL---SAQARHHSHTKHNKHSHSHKSTKTSPPPPPHNCY 57
ML++ IL + I +T L +AR H H S S S P
Sbjct: 1 MLKLSRDPILCITTLILIITFSLLSYGTEARLH-HQASQPPSPSPNPNDPSKSPSRSQDL 59
Query: 58 NATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSEL--PGNVILVPKGFSFIIQSTIFT 115
+ ++DV +GAVG+G+ADDTVSFK AWD+AC + +V+ VP GF+F+I+STIFT
Sbjct: 60 DHEVVYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYGFTFMIRSTIFT 119
Query: 116 GPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDL 175
GPC+ F+V+GT++P DGP+SWP ++++ QWL FYRINGM+L+G+G+IDGRG+ WWDL
Sbjct: 120 GPCRSYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYRINGMALQGAGVIDGRGQNWWDL 179
Query: 176 PCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESI 235
PCKPH+ A+RFFMSSN+ V+GL +KNSPQ + + DGC VH+ S+
Sbjct: 180 PCKPHQ----------------ALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSL 223
Query: 236 YITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPG-HGIS 294
I +P SPNTDGIHIEN+N V+IYNS+ISNGDDCVSIG G YD+DI+NITCGPG HGIS
Sbjct: 224 RIISPPASPNTDGIHIENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGIS 283
Query: 295 IGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPII 354
IGSLG NS ACVSN+TVRDS +K ++NGVRIKTWQGGSGSVSGV F NI + VRNPII
Sbjct: 284 IGSLGEKNSHACVSNVTVRDSFIKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPII 343
Query: 355 IDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELL 414
IDQ+YC T+ C NKTSAVFV++I+Y +IKGTYD+RS PM F CS+++PCT+L LS+IELL
Sbjct: 344 IDQYYCTTKSCANKTSAVFVNDIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNIELL 403
Query: 415 PAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTPQSWL 453
P++ DI PFCWNAYG ++P +SCL S L
Sbjct: 404 PSKEDIVVGPFCWNAYGITDEFSVPLISCLKSNPSTSLL 442
>ref|NP_908534.1| putative polygalacturonase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 503
Score = 518 bits (1335), Expect = e-145
Identities = 250/484 (51%), Positives = 334/484 (68%), Gaps = 49/484 (10%)
Query: 9 ILPLAFCIFSLTLFLSAQARHHSHTKHNKHSHSHKSTKT--------------------- 47
+L LAF ++ A++ H H KH K + +H ++
Sbjct: 15 LLALAFASSFISAADGARSARHHHAKHAKRNAAHPPSQAPGPAARHAPGPARHHGAPAPH 74
Query: 48 ----SPPPP-PHN----------------CYNATGIFDVTT-FGAVGDGIADDTVSFKMA 85
SPP P P N A ++D+ FGA GDG+ DDT + K A
Sbjct: 75 PGRRSPPAPAPANPPSSDPMPGGAPSAAPAAGAATVYDIVKDFGAAGDGVTDDTDALKTA 134
Query: 86 WDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISR 145
WDTAC + G V+L G SF+I +T+FTGPCQG + +V+GT++ P P +WP N R
Sbjct: 135 WDTACADDGAG-VVLAAAGRSFLIHTTVFTGPCQGSVTLQVDGTIVAPSEPATWPANNKR 193
Query: 146 HQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSS 205
+ WLVFYR +G+SL G+GLIDG+G+KWWDLPCKPH+ G GPCDSPVA+RF +S+
Sbjct: 194 N-WLVFYRADGVSLVGAGLIDGKGQKWWDLPCKPHKGG----NTHGPCDSPVAMRFAISN 248
Query: 206 NLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMIS 265
N+TV+GL+V+NSP+F+FRFD C V V+ + I++P LSPNTDGIH+ENT+DV I N+++S
Sbjct: 249 NVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGIHVENTSDVLITNTVVS 308
Query: 266 NGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVR 325
NGDDCVSIG+G +V I+N+TCGPGHGISIGSLG ++ACV+N+TVR+++++ +DNGVR
Sbjct: 309 NGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVANVTVRNAVIRHSDNGVR 368
Query: 326 IKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGT 385
IKTWQGGSGSVS V F N+RM VRNPIIIDQ+YC+++ C N+T+AVFV+ + Y+ I+GT
Sbjct: 369 IKTWQGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENETTAVFVNGVSYSGIRGT 428
Query: 386 YDVRSLPMRFACSDSIPCTHLALSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLM 445
YDVR P+ F CSD++PCT++ LSD+ELLPA GD +PFCWN YG+ T T+PPVSCL
Sbjct: 429 YDVRGPPIHFGCSDAVPCTNITLSDVELLPASGDTVDEPFCWNVYGNAATPTVPPVSCLS 488
Query: 446 QGTP 449
G P
Sbjct: 489 SGFP 492
>dbj|BAD86981.1| putative polygalacturonase PG1 [Oryza sativa (japonica
cultivar-group)]
Length = 410
Score = 514 bits (1324), Expect = e-144
Identities = 233/392 (59%), Positives = 308/392 (78%), Gaps = 7/392 (1%)
Query: 59 ATGIFDVTT-FGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGP 117
A ++D+ FGA GDG+ DDT + K AWDTAC + G V+L G SF+I +T+FTGP
Sbjct: 14 AATVYDIVKDFGAAGDGVTDDTDALKTAWDTACADDGAG-VVLAAAGRSFLIHTTVFTGP 72
Query: 118 CQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPC 177
CQG + +V+GT++ P P +WP N R+ WLVFYR +G+SL G+GLIDG+G+KWWDLPC
Sbjct: 73 CQGSVTLQVDGTIVAPSEPATWPANNKRN-WLVFYRADGVSLVGAGLIDGKGQKWWDLPC 131
Query: 178 KPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYI 237
KPH+ G GPCDSPVA+RF +S+N+TV+GL+V+NSP+F+FRFD C V V+ + I
Sbjct: 132 KPHKGG----NTHGPCDSPVAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSI 187
Query: 238 TAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGS 297
++P LSPNTDGIH+ENT+DV I N+++SNGDDCVSIG+G +V I+N+TCGPGHGISIGS
Sbjct: 188 SSPALSPNTDGIHVENTSDVLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGS 247
Query: 298 LGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQ 357
LG ++ACV+N+TVR+++++ +DNGVRIKTWQGGSGSVS V F N+RM VRNPIIIDQ
Sbjct: 248 LGKAGTKACVANVTVRNAVIRHSDNGVRIKTWQGGSGSVSAVAFENVRMDAVRNPIIIDQ 307
Query: 358 FYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAE 417
+YC+++ C N+T+AVFV+ + Y+ I+GTYDVR P+ F CSD++PCT++ LSD+ELLPA
Sbjct: 308 YYCLSKSCENETTAVFVNGVSYSGIRGTYDVRGPPIHFGCSDAVPCTNITLSDVELLPAS 367
Query: 418 GDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTP 449
GD +PFCWN YG+ T T+PPVSCL G P
Sbjct: 368 GDTVDEPFCWNVYGNAATPTVPPVSCLSSGFP 399
>ref|NP_908736.1| putative polygalacturonase PG2 [Oryza sativa (japonica
cultivar-group)]
Length = 465
Score = 483 bits (1243), Expect = e-135
Identities = 236/438 (53%), Positives = 308/438 (69%), Gaps = 30/438 (6%)
Query: 41 SHKSTKTSPPPPPHNCYNATG----IFDVTTFGAVGDGIA--DDTVSFKMAWDTACQSEL 94
S K++ +SPPPP C G +FDV FGA G+G + DT +F+ AW AC +E
Sbjct: 29 SPKNSSSSPPPP---CTGGGGGISNVFDVRAFGATGNGSSADGDTRAFRAAWKAACSAE- 84
Query: 95 PGNVILVPKGFSFIIQSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRI 154
+LVP F I STIF GPC+ G+ F+++G LMPPDGP SWP R QW+VFYR
Sbjct: 85 -SATVLVPSDGVFTITSTIFAGPCKPGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRA 143
Query: 155 NGMSLEGSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRV 214
+GM+L G G I+G GE+WW+LPCKPHR GP+ +TLPGPC+SP I+F SS+++VQGLR+
Sbjct: 144 DGMTLSGKGTIEGNGEEWWNLPCKPHR-GPNGSTLPGPCESPALIKFVASSDVSVQGLRM 202
Query: 215 KNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIG 274
+NSPQF+ +FDGC +V V+ + +++P SPNTDG+H+ENT+ V+I NS ISNGDDCVSIG
Sbjct: 203 ENSPQFHLKFDGCSRVLVDGLVVSSPASSPNTDGVHVENTSSVRILNSRISNGDDCVSIG 262
Query: 275 SGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSG 334
GC V ++N+TC GHGISIG LG +RACVSN+TVR + + +DNGVRIKTWQGG+G
Sbjct: 263 GGCSGVRVENVTCVHGHGISIGGLGARGARACVSNVTVRGARVVDSDNGVRIKTWQGGAG 322
Query: 335 SVSGVKFSNIRMVNVRNPIIIDQFYCITE-----GCTNKTSAVFVSNILYTNIKGTYDVR 389
SVSGV F ++MVNVR I+IDQ+YC GC N+T+AV V + Y I+GTY+ R
Sbjct: 323 SVSGVVFDAVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVRVDGVAYRGIRGTYNPR 382
Query: 390 ---SLPMRFACSDSIPCTHLALSDIELLPA----EGDIAH------DPFCWNAYGDLQTL 436
P+RFACSD++ CT + ++D+ELLPA EG A DP+CWNAYG ++TL
Sbjct: 383 GGGGAPVRFACSDTVACTGITMTDVELLPAGGGDEGGGASAGAKLADPYCWNAYGVMETL 442
Query: 437 TIPPVSCLMQGTPQSWLD 454
T PPV CL +G P+S D
Sbjct: 443 TQPPVHCLQEGRPESLQD 460
>dbj|BAD54709.1| putative polygalacturonase PG2 [Oryza sativa (japonica
cultivar-group)]
Length = 759
Score = 483 bits (1243), Expect = e-135
Identities = 236/438 (53%), Positives = 308/438 (69%), Gaps = 30/438 (6%)
Query: 41 SHKSTKTSPPPPPHNCYNATG----IFDVTTFGAVGDGIA--DDTVSFKMAWDTACQSEL 94
S K++ +SPPPP C G +FDV FGA G+G + DT +F+ AW AC +E
Sbjct: 323 SPKNSSSSPPPP---CTGGGGGISNVFDVRAFGATGNGSSADGDTRAFRAAWKAACSAE- 378
Query: 95 PGNVILVPKGFSFIIQSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRI 154
+LVP F I STIF GPC+ G+ F+++G LMPPDGP SWP R QW+VFYR
Sbjct: 379 -SATVLVPSDGVFTITSTIFAGPCKPGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRA 437
Query: 155 NGMSLEGSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRV 214
+GM+L G G I+G GE+WW+LPCKPHR GP+ +TLPGPC+SP I+F SS+++VQGLR+
Sbjct: 438 DGMTLSGKGTIEGNGEEWWNLPCKPHR-GPNGSTLPGPCESPALIKFVASSDVSVQGLRM 496
Query: 215 KNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIG 274
+NSPQF+ +FDGC +V V+ + +++P SPNTDG+H+ENT+ V+I NS ISNGDDCVSIG
Sbjct: 497 ENSPQFHLKFDGCSRVLVDGLVVSSPASSPNTDGVHVENTSSVRILNSRISNGDDCVSIG 556
Query: 275 SGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSG 334
GC V ++N+TC GHGISIG LG +RACVSN+TVR + + +DNGVRIKTWQGG+G
Sbjct: 557 GGCSGVRVENVTCVHGHGISIGGLGARGARACVSNVTVRGARVVDSDNGVRIKTWQGGAG 616
Query: 335 SVSGVKFSNIRMVNVRNPIIIDQFYCITE-----GCTNKTSAVFVSNILYTNIKGTYDVR 389
SVSGV F ++MVNVR I+IDQ+YC GC N+T+AV V + Y I+GTY+ R
Sbjct: 617 SVSGVVFDAVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVRVDGVAYRGIRGTYNPR 676
Query: 390 ---SLPMRFACSDSIPCTHLALSDIELLPA----EGDIAH------DPFCWNAYGDLQTL 436
P+RFACSD++ CT + ++D+ELLPA EG A DP+CWNAYG ++TL
Sbjct: 677 GGGGAPVRFACSDTVACTGITMTDVELLPAGGGDEGGGASAGAKLADPYCWNAYGVMETL 736
Query: 437 TIPPVSCLMQGTPQSWLD 454
T PPV CL +G P+S D
Sbjct: 737 TQPPVHCLQEGRPESLQD 754
>emb|CAB87632.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15241460|ref|NP_196969.1| polygalacturonase, putative
/ pectinase, putative [Arabidopsis thaliana]
gi|11263973|pir||T48638 polygalacturonase-like protein -
Arabidopsis thaliana
Length = 435
Score = 384 bits (986), Expect = e-105
Identities = 190/388 (48%), Positives = 259/388 (65%), Gaps = 18/388 (4%)
Query: 59 ATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGP- 117
++G +V GA GDG +DDT +F+ AW AC+ + + +LVP G +F++ F G
Sbjct: 47 SSGTINVLDHGAKGDGTSDDTKAFEDAWQVACK--VAASTLLVPSGSTFLVGPVSFLGKE 104
Query: 118 CQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPC 177
C+ IVF++EG ++ P +W + QW+ F + G++++G G+IDGRG WW+
Sbjct: 105 CKEKIVFQLEGKIIAPTSASAWGSGLL--QWIEFKALQGITIKGKGIIDGRGSVWWN--- 159
Query: 178 KPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYI 237
P P A+RF+ S+ +TV G+ ++NSPQ + +FD CI + V
Sbjct: 160 -------DMMGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTT 212
Query: 238 TAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGS 297
++P SPNTDGIH++N+ D IY S ++ GDDC+SI +GC +++I ++ CGPGHGISIG
Sbjct: 213 SSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGISIGG 272
Query: 298 LGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQ 357
LG N++ACVSNITVRD M T NGVRIK+WQGGSGSV V FSNI++ NV NPIIIDQ
Sbjct: 273 LGKDNTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSNVANPIIIDQ 332
Query: 358 FYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAE 417
+YC GC N+TSAV VSNI Y NIKGTY P+RFACSDS+PCT ++LS IEL PA
Sbjct: 333 YYCDGGGCHNETSAVAVSNINYINIKGTYTKE--PVRFACSDSLPCTGISLSTIELKPAT 390
Query: 418 GDIAH-DPFCWNAYGDLQTLTIPPVSCL 444
G + DPFCW A+G+L+T T+PP+ CL
Sbjct: 391 GKASSLDPFCWKAHGELKTKTLPPIQCL 418
>ref|NP_564758.2| polygalacturonase, putative / pectinase, putative [Arabidopsis
thaliana] gi|2462753|gb|AAB71972.1| putative
polygalacturonase [Arabidopsis thaliana]
gi|25404278|pir||B96631 probable polygalacturonase
F8A5.12 [imported] - Arabidopsis thaliana
Length = 540
Score = 383 bits (984), Expect = e-105
Identities = 208/503 (41%), Positives = 292/503 (57%), Gaps = 72/503 (14%)
Query: 18 SLTLFLSAQARHHSHTKHNKHSHSHKST-----KTSPP------------------PPPH 54
S +L S ++ ++N H SHKS KT PP PPPH
Sbjct: 45 SSSLSDSLSSKKPKSHENNHHHMSHKSKPKPKMKTQPPKSNDGSPVVSQPPQVQQPPPPH 104
Query: 55 NCYNATGI----------FDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKG 104
T + F+V FGA GDG++DDT +F+ AW +AC+ E + +++P
Sbjct: 105 VQPPPTPLPLQPVEDSQQFNVLDFGAKGDGMSDDTQAFEAAWASACKVE--ASTMIIPPD 162
Query: 105 FSFIIQSTIFTGP-CQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSG 163
+ F++ F+GP CQ IVF++EG ++ P ESW + W+ F +++G++++G+G
Sbjct: 163 YIFLVGPISFSGPYCQANIVFQLEGMIVAPTDTESWGGGLM--WWIEFTKLSGITIQGNG 220
Query: 164 LIDGRGEKWW-------------------------DLPCKPHRQGPHWTTLPGPCDSPVA 198
+IDGRG WW + P P R +W P P A
Sbjct: 221 VIDGRGTVWWQQDYLSDYPIDDDFKLIVPLNNSVQERPPMPIRSELNWRM---PSIKPTA 277
Query: 199 IRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVK 258
+RF+ S ++TV G+ ++NSPQ + +FD C+KV V + +++P SPNTDGIH++NT DV
Sbjct: 278 LRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVM 337
Query: 259 IYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMK 318
I+ + ++ GDDC+SI +GC +V + N+ CGPGHGISIGSLG +++ACVSNITVRD +M
Sbjct: 338 IHTTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMH 397
Query: 319 GTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNIL 378
T GVRIKTWQGG GSV G+ FSNI++ V+ PI+IDQFYC C N TSAV V +
Sbjct: 398 NTMTGVRIKTWQGGIGSVKGILFSNIQLTEVQLPIVIDQFYCDHSKCMNHTSAVSVEGVT 457
Query: 379 YTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAEGDI-AHDPFCWNAYGDLQTLT 437
Y I+GTY V+ P+ FACSDS PC + LS IEL P + +DPFCW +G+L + T
Sbjct: 458 YEKIRGTYTVK--PVHFACSDSFPCIDVQLSGIELKPVQLQYHMYDPFCWKTFGELNSAT 515
Query: 438 IPPVSCLMQGTPQS---WLDHDI 457
+PP+ CL G P DHDI
Sbjct: 516 VPPIDCLQIGKPARNGVHSDHDI 538
>gb|AAN18178.1| At1g60590/F8A5_12 [Arabidopsis thaliana] gi|16974585|gb|AAL31197.1|
At1g60590/F8A5_12 [Arabidopsis thaliana]
Length = 474
Score = 383 bits (983), Expect = e-105
Identities = 203/479 (42%), Positives = 283/479 (58%), Gaps = 59/479 (12%)
Query: 29 HHSHTKHNKHSHSHKSTKTSP----------PPPPHNCYNATGI----------FDVTTF 68
H S K + KS SP PPPPH T + F+V F
Sbjct: 3 HKSKPKPKMKTQPPKSNDGSPVVSQPPQVQQPPPPHVQPPPTPLPLQPVEDSQQFNVLDF 62
Query: 69 GAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGP-CQGGIVFKVE 127
GA GDG++DDT +F+ AW +AC+ E + +++P + F++ F+GP CQ IVF++E
Sbjct: 63 GAKGDGMSDDTQAFEAAWASACKVE--ASTMIIPPDYIFLVGPISFSGPYCQANIVFQLE 120
Query: 128 GTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWW-------------- 173
G ++ P ESW + W+ F +++G++++G+G+IDGRG WW
Sbjct: 121 GMIVAPTDTESWGGGLM--WWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSDYPIDDDF 178
Query: 174 -----------DLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNF 222
+ P P R +W P P A+RF+ S ++TV G+ ++NSPQ +
Sbjct: 179 KLIVPLNNSVQERPPMPIRSELNWRM---PSIKPTALRFYGSIDVTVTGITIQNSPQCHL 235
Query: 223 RFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDI 282
+FD C+KV V + +++P SPNTDGIH++NT DV I+ + ++ GDDC+SI +GC +V +
Sbjct: 236 KFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYV 295
Query: 283 KNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFS 342
N+ CGPGHGISIGSLG +++ACVSNITVRD +M T GVRIKTWQGG GSV G+ FS
Sbjct: 296 HNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFS 355
Query: 343 NIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIP 402
NI++ V+ PI+IDQFYC C N TSAV V + Y I+GTY V+ P+ FACSDS P
Sbjct: 356 NIQLTEVQLPIVIDQFYCDHSKCMNHTSAVSVEGVTYEKIRGTYTVK--PVHFACSDSFP 413
Query: 403 CTHLALSDIELLPAEGDI-AHDPFCWNAYGDLQTLTIPPVSCLMQGTPQS---WLDHDI 457
C + LS IEL P + +DPFCW +G+L + T+PP+ CL G P DHDI
Sbjct: 414 CIDVQLSGIELKPVQLQYHMYDPFCWKTFGELNSATVPPIDCLQIGKPARNGVHSDHDI 472
>gb|AAD46483.1| polygalacturonase PG1 [Glycine max]
Length = 443
Score = 372 bits (954), Expect = e-101
Identities = 184/404 (45%), Positives = 265/404 (65%), Gaps = 12/404 (2%)
Query: 63 FDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGP-CQGG 121
F+V +GA GDG ADDT +F+ AW AC+ E G+ ++VP G F+++ F+GP C+
Sbjct: 46 FNVLDYGAKGDGHADDTKAFEDAWAAACKVE--GSTMVVPSGSVFLVKPISFSGPNCEPN 103
Query: 122 IVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHR 181
IVF+++G ++ P E+W QWL F ++N +++ G G+IDG+G WW+ +
Sbjct: 104 IVFQLDGKIIAPTSSEAWGSGTL--QWLEFSKLNTITIRGKGVIDGQGSVWWNNDSPTYN 161
Query: 182 QGPHWTTLPG--PCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITA 239
G P P A+RF+ S +TV G+ ++NS Q + +FD C V V I +++
Sbjct: 162 PTEVMLESNGRLPSTKPTALRFYGSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSS 221
Query: 240 PKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLG 299
P SPNTDGIH++N+ +V IY+S ++ GDDCVSI +GC D+ + N+ CGPGHGISIGSLG
Sbjct: 222 PGDSPNTDGIHLQNSQNVVIYSSTLACGDDCVSIQTGCSDIYVHNVNCGPGHGISIGSLG 281
Query: 300 IHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFY 359
N++ACV N+TVRD ++ T GVRIKTWQGGSGSV + FSN+++ V+ PI IDQ+Y
Sbjct: 282 RENTKACVRNVTVRDVTIQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQTPISIDQYY 341
Query: 360 CITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPA-EG 418
C C N++SAV VS I Y N+KGTY P+ FACSD++PC+ + L I+L A E
Sbjct: 342 CDGGRCRNESSAVAVSGIHYVNVKGTYTKE--PIYFACSDNLPCSGITLDTIQLESAQET 399
Query: 419 DIAHDPFCWNAYGDLQTLTIPPVSCLMQGTP--QSWLDHDINGC 460
++ PFCW AYG+L+T T+PPV CL +G P + ++ +I+ C
Sbjct: 400 KNSNVPFCWEAYGELKTTTVPPVECLQRGNPSKEGGINSNIDSC 443
>dbj|BAD68931.1| polygalacturonase PG1-like [Oryza sativa (japonica cultivar-group)]
Length = 538
Score = 367 bits (942), Expect = e-100
Identities = 182/412 (44%), Positives = 269/412 (65%), Gaps = 21/412 (5%)
Query: 49 PPPPPHNCYNATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFI 108
PP P +F+V FGA GDG++DDT +F+ AW AC+ + ++VP F+
Sbjct: 125 PPSRPTPTSPQGAVFNVVDFGAKGDGVSDDTKAFEAAWAAACKQG--ASTVVVPSELEFL 182
Query: 109 IQSTIFTGP-CQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDG 167
+ F+GP C+ I+F+++GT++ P ++W + QW+ F ++NG+S++G+G+I+G
Sbjct: 183 VGPISFSGPYCKPNILFQLDGTIVAPTSAKAWGSGLL--QWIEFTKLNGVSIQGNGIING 240
Query: 168 RGEKWW------DLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFN 221
RG++WW D + + +P P A+RF+ S N+ V G+ + NS Q +
Sbjct: 241 RGQQWWTYSDIDDDEDDDTQYDVEFERMPQV--KPTALRFYGSFNVVVAGITIVNSSQCH 298
Query: 222 FRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVD 281
+FD C V V + I++P+ S NTDGIH++N+ DV I+++ ++ GDDCVSI +GC +++
Sbjct: 299 LKFDSCQGVMVHDVTISSPENSLNTDGIHLQNSKDVSIHHTNLACGDDCVSIQTGCSNIN 358
Query: 282 IKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKF 341
I N+ CGPGHGISIG LG N++ACVSN+TVRD M T GVRIKTWQGG G V V+F
Sbjct: 359 IHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDVNMFRTMTGVRIKTWQGGLGLVQDVRF 418
Query: 342 SNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSI 401
SNI++ V+ PIIIDQFYC C+N+TSAV VS + Y NI+GT+ ++ P+ FACSDS
Sbjct: 419 SNIQVSEVQTPIIIDQFYCDKRTCSNQTSAVAVSGVQYENIRGTFTIK--PVHFACSDSS 476
Query: 402 PCTHLALSDIELLPAEGDIAH----DPFCWNAYGDLQTLTIPPVSCLMQGTP 449
PC+ + L+ ++L P + I H DPFCW A+G+L T T+PP++CL G P
Sbjct: 477 PCSGITLTGVQLRPVQ--IPHYRLNDPFCWQAFGELYTPTVPPIACLHLGKP 526
>gb|AAD46484.1| polygalacturonase PG2 [Glycine max]
Length = 439
Score = 365 bits (937), Expect = 2e-99
Identities = 181/391 (46%), Positives = 257/391 (65%), Gaps = 10/391 (2%)
Query: 63 FDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGP-CQGG 121
F+V +GA G ADDT +F+ AW AC+ E G+ ++VP G F+++ F+GP C+
Sbjct: 42 FNVLDYGAKDGGHADDTKAFQNAWVAACKVE--GSTMVVPSGSVFLVKPISFSGPNCEPN 99
Query: 122 IVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHR 181
IVF+++G ++ P G +W QWL F ++N +++ G G+IDG+G WW+ +
Sbjct: 100 IVFQLDGKIIAPTGSAAWGSGTL--QWLEFSKLNKITIRGKGVIDGQGSVWWNNDSPTYN 157
Query: 182 QGPHWTTLPG--PCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITA 239
G P P A+RF+ S +TV G+ ++NS Q + +FD C V V I +++
Sbjct: 158 PTEVMLESNGRLPSTKPTALRFYGSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSS 217
Query: 240 PKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLG 299
P SPNTDGIH++N+ +V IY+S ++ GDDC+SI +GC D+ + N+ CGPGHGISIGSLG
Sbjct: 218 PGDSPNTDGIHLQNSQNVVIYSSTLACGDDCISIQTGCSDIYVHNVNCGPGHGISIGSLG 277
Query: 300 IHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFY 359
N++ACV N+TVRD ++ T GVRIKTWQGGSGSV + FSN+++ V+ PI+IDQ+Y
Sbjct: 278 RENTKACVRNVTVRDVTIQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQIPILIDQYY 337
Query: 360 CITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPA-EG 418
C C N++SAV VS I Y NIKGTY + P+ FACSD++PCT + L I L A E
Sbjct: 338 CDGGKCRNESSAVAVSAIHYVNIKGTYTKQ--PIYFACSDNLPCTGITLDTIRLESAQET 395
Query: 419 DIAHDPFCWNAYGDLQTLTIPPVSCLMQGTP 449
++ PFCW AYG+L+T T+PPV CL +G P
Sbjct: 396 KNSNVPFCWEAYGELKTKTVPPVECLQRGNP 426
>gb|AAO24262.1| putative style polygalacturonase [Turnera subulata]
Length = 473
Score = 351 bits (900), Expect = 3e-95
Identities = 185/400 (46%), Positives = 246/400 (61%), Gaps = 25/400 (6%)
Query: 57 YNATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTG 116
Y F+V +GA GDG DDT AW A ++ + ILVP G F + F G
Sbjct: 82 YGKPSSFNVLDYGAKGDGHTDDT----KAWTDA--GKVARSKILVPAGSVFFVGPVSFLG 135
Query: 117 P-CQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWW-D 174
C I +++GT++ P + W + QW+ F +NG +++G G IDGRG WW D
Sbjct: 136 SGCGANIELQLDGTILAPVSSKIWGSGLL--QWIEFKELNGFTIQGKGTIDGRGSVWWND 193
Query: 175 LPCKPHRQGPHWTTLPG-------PCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGC 227
LP G W + G P P A+RF+ S+ +TV G+ ++NSPQ + +FD C
Sbjct: 194 LPS----YGSEWESEVGNQLDGKMPSTKPTALRFYGSTGVTVTGITIQNSPQTHLKFDSC 249
Query: 228 IKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITC 287
V V ++P SPNTDGIH++N+ +V IY+S ++ GDDC+SI +GC +V I N+ C
Sbjct: 250 TGVQVSDFTTSSPGNSPNTDGIHLQNSQNVLIYSSDLACGDDCISIQTGCSNVFIHNVNC 309
Query: 288 GPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMV 347
GPGHGISIG LG N++ACVSN+TVRD M T GVRIKTWQGGSGSV G+ FSN+++
Sbjct: 310 GPGHGISIGGLGKDNTKACVSNVTVRDVSMHNTLTGVRIKTWQGGSGSVQGITFSNVQVS 369
Query: 348 NVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLA 407
V PI+IDQFYC C N +SAV ++ I Y IKGTY + P+ FACSDS+PC ++
Sbjct: 370 GVGTPIMIDQFYCDGSKCKNDSSAVALTGINYLGIKGTYTEK--PIHFACSDSMPCVGVS 427
Query: 408 LSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQG 447
LS IEL +E D P CWNAYG ++T T+PPV CL G
Sbjct: 428 LSTIELTASEED--SPPLCWNAYGTVKTTTLPPVDCLRTG 465
>dbj|BAA88472.1| polygalacturonase [Cucumis sativus]
Length = 435
Score = 333 bits (855), Expect = 5e-90
Identities = 166/372 (44%), Positives = 242/372 (64%), Gaps = 16/372 (4%)
Query: 62 IFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQGG 121
+ +V +F A+GDG+ DDT++F+ AW+TAC + +V+LVPK ++++ +T F GPC+ G
Sbjct: 65 LMNVDSFDAIGDGVTDDTMAFRKAWETACSTSK--SVLLVPKEKTYLVNATTFKGPCKDG 122
Query: 122 IVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHR 181
+V ++EGT++ PD PE W R QWL F ++N + +G G+IDG GEKWW CK ++
Sbjct: 123 MVIQIEGTIVAPDEPELWDPKFPR-QWLEFTKLNAATFQGDGVIDGSGEKWWAESCKKNK 181
Query: 182 QGPHWTTLPGPCD-SPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAP 240
P C +P A+ SSN+ V+GL ++NS Q +F V + + ++AP
Sbjct: 182 SRP--------CKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSETVRITGVRVSAP 233
Query: 241 KLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGI 300
SPNTDGIHI + +V + N IS GDDC+SI + + +K I+CGPGHGISIGSLG
Sbjct: 234 GDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGPGHGISIGSLGK 293
Query: 301 HNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYC 360
NS V+ + + + ++ T NGVRIKTWQGGSG V V+F N+RM +V NPIIIDQFYC
Sbjct: 294 DNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFENVRMEDVENPIIIDQFYC 353
Query: 361 IT-EGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAEGD 419
+ C ++TSAV +S I+Y NI GT ++ M+FACSDS+PC+++ LS++ L +G
Sbjct: 354 DSPTTCESQTSAVKISQIMYRNISGTTTSKN-AMKFACSDSVPCSNIILSNVNLEKTDGT 412
Query: 420 IAHDPFCWNAYG 431
+ + +C A G
Sbjct: 413 V--ETYCHAAQG 422
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.138 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 899,046,484
Number of Sequences: 2540612
Number of extensions: 41573664
Number of successful extensions: 106073
Number of sequences better than 10.0: 599
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 103707
Number of HSP's gapped (non-prelim): 773
length of query: 460
length of database: 863,360,394
effective HSP length: 131
effective length of query: 329
effective length of database: 530,540,222
effective search space: 174547733038
effective search space used: 174547733038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0122.9