BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0121b.8
(368 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA40555.1| TNP2 [Antirrhinum majus] 337 4e-91
pir||S23818 hypothetical protein Tnp2 - garden snapdragon transp... 337 4e-91
gb|AAV44159.1| unknown protein [Oryza sativa (japonica cultivar-... 317 5e-85
gb|AAP53328.1| putative TNP2-like transposon protein [Oryza sati... 295 1e-78
emb|CAD40478.2| OSJNBa0067G20.9 [Oryza sativa (japonica cultivar... 284 3e-75
ref|XP_476122.1| hypothetical protein [Oryza sativa (japonica cu... 273 5e-72
gi|38678252 TPA: transposase [Oryza sativa] 269 9e-71
gb|AAP52603.1| putative transposon protein [Oryza sativa (japoni... 269 9e-71
gb|AAP52075.1| putative TNP-like transposable element [Oryza sat... 269 9e-71
gb|AAU90123.1| putative polyprotein [Oryza sativa (japonica cult... 268 1e-70
ref|NP_915592.1| putative TNP2-like transposable element [Oryza ... 268 3e-70
emb|CAD41539.2| OSJNBb0091E11.7 [Oryza sativa (japonica cultivar... 268 3e-70
gb|AAX96305.1| transposon protein, putative, CACTA, En/Spm sub-c... 267 3e-70
gi|38678228 TPA: transposase [Oryza sativa] gi|34911856|ref|NP_9... 267 4e-70
gb|AAP53741.1| putative rice tungro bacilliform virus; reverse t... 267 4e-70
gb|AAP52539.1| putative transposon protein [Oryza sativa (japoni... 267 4e-70
ref|XP_474660.1| OSJNBa0052P16.11 [Oryza sativa (japonica cultiv... 267 4e-70
ref|XP_470081.1| putative transposase [Oryza sativa (japonica cu... 267 4e-70
gb|AAU90267.1| Transposase family protein [Oryza sativa (japonic... 267 4e-70
gb|AAX95556.1| Transposase family tnp2, putative [Oryza sativa (... 267 4e-70
>emb|CAA40555.1| TNP2 [Antirrhinum majus]
Length = 752
Score = 337 bits (863), Expect = 4e-91
Identities = 177/381 (46%), Positives = 234/381 (60%), Gaps = 38/381 (9%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRES--NGETIPCPCKKCVLHYVVNRAMAYEHLMVN 60
+ WM R+++EY +G++ FLD AF NG+ I CPCK+C ++R A EHL+++
Sbjct: 8 KSWMHKSRLTEEYENGLDQFLDFAFDNVCLNGKII-CPCKQCKNALWMDRETAKEHLIID 66
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRG-DDMVGLIHDAFEGFNQSMGNNISDG 119
G I Y W HGE + + N + E +DM L+HDAF
Sbjct: 67 GFIKGYTHWVIHGEG----SSNSQNNIQNERLNTFEDMHNLVHDAF-------------- 108
Query: 120 GDIESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSFVLHLYHIKRLF 179
G + N++ + + E + F +L+ DA +ELY GCK FS+L F++ L+H+K L
Sbjct: 109 GVEDDNINSEEEPNEEEEPNEEAKTFYKLLDDAQQELYPGCKDFSRLRFIVRLFHLKCLG 168
Query: 180 KWTNESFDALLGLLKDALPEG-EKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNEL 238
KW+N++F LL LLK+A PE LP S+YE +KI+G LGL KI ACPNDCML+R E
Sbjct: 169 KWSNKTFTMLLELLKEAFPEQTNSLPKSYYEVQKIIGALGLTCVKIDACPNDCMLYRKEH 228
Query: 239 ADKNVNKCIKCGASRWKNDE-------------KKVPAKVLRYFPLKSRLQRLFMSSETS 285
A N + C C SR+ E K+VPAKVLRYFPLK RLQRLF SS+T+
Sbjct: 229 A--NDDACHVCNTSRYIEGENNSVSEEASSSKCKRVPAKVLRYFPLKPRLQRLFTSSKTA 286
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
MRWH + R KDG LRHP+DS W FD QH +FA+D RN+RLGLA+DGFNP+ +M V
Sbjct: 287 SFMRWHKEERTKDGQLRHPSDSPLWHAFDHQHPDFAEDPRNIRLGLAADGFNPFRTMSVA 346
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPVIL PYN+PPW+CMK+
Sbjct: 347 HSTWPVILTPYNIPPWMCMKE 367
>pir||S23818 hypothetical protein Tnp2 - garden snapdragon transposable element
Tam1
Length = 752
Score = 337 bits (863), Expect = 4e-91
Identities = 177/381 (46%), Positives = 234/381 (60%), Gaps = 38/381 (9%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRES--NGETIPCPCKKCVLHYVVNRAMAYEHLMVN 60
+ WM R+++EY +G++ FLD AF NG+ I CPCK+C ++R A EHL+++
Sbjct: 8 KSWMHKSRLTEEYENGLDQFLDFAFDNVCLNGKII-CPCKQCKNALWMDRETAKEHLIID 66
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRG-DDMVGLIHDAFEGFNQSMGNNISDG 119
G I Y W HGE + + N + E +DM L+HDAF
Sbjct: 67 GFIKGYTHWVIHGEG----SSNSQNNIQNERLNTFEDMHNLVHDAF-------------- 108
Query: 120 GDIESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSFVLHLYHIKRLF 179
G + N++ + + E + F +L+ DA +ELY GCK FS+L F++ L+H+K L
Sbjct: 109 GVEDDNINSEEEPNEEEEPNEEAKTFYKLLDDAQQELYPGCKDFSRLRFIVRLFHLKCLG 168
Query: 180 KWTNESFDALLGLLKDALPEG-EKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNEL 238
KW+N++F LL LLK+A PE LP S+YE +KI+G LGL KI ACPNDCML+R E
Sbjct: 169 KWSNKTFTMLLELLKEAFPEQTNSLPKSYYEVQKIIGALGLTCVKIDACPNDCMLYRKEH 228
Query: 239 ADKNVNKCIKCGASRWKNDE-------------KKVPAKVLRYFPLKSRLQRLFMSSETS 285
A N + C C SR+ E K+VPAKVLRYFPLK RLQRLF SS+T+
Sbjct: 229 A--NDDACHVCNTSRYIEGENNSVSEEASSSKCKRVPAKVLRYFPLKPRLQRLFTSSKTA 286
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
MRWH + R KDG LRHP+DS W FD QH +FA+D RN+RLGLA+DGFNP+ +M V
Sbjct: 287 SFMRWHKEERTKDGQLRHPSDSPLWHAFDHQHPDFAEDPRNIRLGLAADGFNPFRTMSVA 346
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPVIL PYN+PPW+CMK+
Sbjct: 347 HSTWPVILTPYNIPPWMCMKE 367
>gb|AAV44159.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1516
Score = 317 bits (811), Expect = 5e-85
Identities = 178/401 (44%), Positives = 232/401 (57%), Gaps = 39/401 (9%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGET-IPCPCKKCVLHYVVNRAMAYEHLMVNG 61
R WM R S Y DGV FL AFR+ + + CPC C N HL G
Sbjct: 3 RDWMSEPRTSASYKDGVAHFLSIAFRDVPDDAKVLCPCVNCRNRITQNYDRVKTHLRCAG 62
Query: 62 IIPSYDTWFCHGESINV----------------LNRKEETNCREEAF-RGDDMVGLIHDA 104
I+ SY W HGE + ++ ++N E R D+M GL++ A
Sbjct: 63 ILQSYTKWIHHGEKYDAPSLVFAPVSGNPRNIPISGAHKSNVVEVGDGRSDNMEGLLNTA 122
Query: 105 F---EGFNQSMGNNISDGGDI------ESNLDENLTHTSRN-QSHPEVEKFEQLMKDANE 154
F + F +I D G E N+ E+ +T + + E + F +L+KDA
Sbjct: 123 FGREDSFESISSASIDDDGIYFESSYAEPNMVEDENNTFGDCHNGGEQDMFTRLLKDAKT 182
Query: 155 ELYSGCKKFSKLSFVLHLYHIKRLFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIV 214
+LY GC KFS+LSF+++LY++K + WT ESF ALLGL DALP+ LP + YE KKI+
Sbjct: 183 KLYHGCDKFSRLSFLVNLYNLKCIHGWTQESFTALLGLQSDALPQEADLPKNCYEAKKII 242
Query: 215 GRLGLKYEKIHACPNDCMLFRNELADKNVNKCIKCGASRWKNDE---------KKVPAKV 265
LGL Y+KIHAC DC+LFR + A N C CG+SRW D+ KK PAKV
Sbjct: 243 RGLGLGYQKIHACHKDCVLFRGDKA--NQESCDVCGSSRWITDKNGYPVESKGKKKPAKV 300
Query: 266 LRYFPLKSRLQRLFMSSETSRLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSR 325
LRYFPL R+QRLF + +TS MRWH++G KDG LRHPAD EAW + ++ F+ D+R
Sbjct: 301 LRYFPLIPRIQRLFSTEQTSGEMRWHEEGHTKDGLLRHPADGEAWNDLNTRYPGFSADAR 360
Query: 326 NVRLGLASDGFNPYSSMKVFDSTWPVILVPYNLPPWLCMKQ 366
NVRLGLASDGFNP+ +M STWPV+L+P+NLPPW+CMKQ
Sbjct: 361 NVRLGLASDGFNPFRNMSSKHSTWPVMLIPFNLPPWICMKQ 401
>gb|AAP53328.1| putative TNP2-like transposon protein [Oryza sativa (japonica
cultivar-group)] gi|37533478|ref|NP_921041.1| putative
TNP2-like transposon protein [Oryza sativa (japonica
cultivar-group)] gi|20279447|gb|AAM18727.1| putative
TNP2-like transposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 1571
Score = 295 bits (756), Expect = 1e-78
Identities = 167/383 (43%), Positives = 223/383 (57%), Gaps = 30/383 (7%)
Query: 2 SRMWMDY--DRVSKEYLDGVESFLDHAFRESNG-ETIPCPCKKCVLHYVVNRAMAYEHLM 58
S+ WM DR++ EYL+GVE F+D+AF + +G + I CPC KC Y + + HL
Sbjct: 4 SKAWMGLVDDRLNHEYLEGVEKFIDYAFSKLDGVQVIRCPCIKCCNTYSLPHHIVSSHLK 63
Query: 59 VNGIIPSYDTWFCHGESI-NVLNRKEETNCREEAFRGDDMVG---LIHDAFEGFNQSMGN 114
GI+ SY W+ HGE + N E + F G+ G L+ D F N
Sbjct: 64 AYGILRSYTFWYHHGEVLAEQENDIEVDEYDSQEFNGEGYNGMQDLMEDLFPQCN----- 118
Query: 115 NISDGGDIESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSFVLHLYH 174
+ GGD ++ E+ + + + KF L+ N+ LY G + SKLS +++L H
Sbjct: 119 --TPGGDEATH--ESTDQGPEEEPNTDAAKFYALLDKYNQPLYEG-SRISKLSALVNLLH 173
Query: 175 IKRLFKWTNESFDALLGLL-KDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCML 233
+K L KW+N+SF ALL LL KD LP LP+S+YE KK + LGL Y KI AC NDCML
Sbjct: 174 VKNLGKWSNKSFTALLELLRKDFLPHDSTLPNSYYEAKKTIRELGLSYIKIDACKNDCML 233
Query: 234 FRNELADKNVNKCIKCGASRWKNDE----------KKVPAKVLRYFPLKSRLQRLFMSSE 283
+ E D + C CG+SRWK KK+P K +RYFP+K RLQRLFM +
Sbjct: 234 YWKE--DIDAESCKVCGSSRWKEKHTREIKHSSAGKKIPHKTMRYFPIKPRLQRLFMCRK 291
Query: 284 TSRLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMK 343
T+ +WH + R G +RHPADS+AWK+FD H FA + RNVRL LASDGF P+++M+
Sbjct: 292 TAAYAKWHKECRVDGGVMRHPADSKAWKEFDKIHSSFASEPRNVRLCLASDGFQPFANMR 351
Query: 344 VFDSTWPVILVPYNLPPWLCMKQ 366
S WPV LVP NLPPW+C+KQ
Sbjct: 352 TSYSIWPVFLVPLNLPPWMCIKQ 374
>emb|CAD40478.2| OSJNBa0067G20.9 [Oryza sativa (japonica cultivar-group)]
gi|50923201|ref|XP_471961.1| OSJNBa0067G20.9 [Oryza
sativa (japonica cultivar-group)]
Length = 815
Score = 284 bits (727), Expect = 3e-75
Identities = 154/375 (41%), Positives = 224/375 (59%), Gaps = 39/375 (10%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGET-IPCPCKKCVLHYVVNRAMAYEHLMVNG 61
++ + Y R S EYL GV FL+ A+++ + +T I CPC+ CV ++++ Y+ L+ NG
Sbjct: 7 KILLRYPRGSDEYLAGVHGFLEFAYKDKSEDTKIYCPCETCVHTMLLSKNDVYDRLVCNG 66
Query: 62 IIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLIHDAFEGFNQSMGNNISDGGD 121
++ SYD W HGES R ++ E R + M LI+DAF + D
Sbjct: 67 MLQSYDQWDFHGESSEEQTRNQQPQPHNENMRAN-MHELINDAFR--------TVYDDVP 117
Query: 122 IESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSFVLHLYHIKRLFKW 181
+ + D THT + + E + F +L+KD+ + L+ GC+ S LS ++ L+++K + KW
Sbjct: 118 MSDHADSPCTHT--DGPNLEAQAFYKLVKDSEKPLWDGCE-LSHLSLLVLLFNMKSMNKW 174
Query: 182 TNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNELADK 241
+++SF LL +L A+P ++LP + YE KK+V + GL Y++IHACPN+C LF +
Sbjct: 175 SDKSFGDLLDILHMAIPNEKELPKNFYEAKKVVSKFGLDYQQIHACPNNCQLFWKDKV-- 232
Query: 242 NVNKCIKCGASRWKNDE----------KKVPAKVLRYFPLKSRLQRLFMSSETSRLMRWH 291
N + C C ASRWK + K P+KVLRYFP+K RL+RLFM ET+ L RWH
Sbjct: 233 NDDFCSICKASRWKGKKPETKLTKERKKATPSKVLRYFPIKDRLKRLFMCRETASLPRWH 292
Query: 292 DKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVFDSTWPV 351
D+ R +DG L+HP DS AWK FD++ ++F DSRN+R GLA+DGFNPY
Sbjct: 293 DEERLEDGALQHPTDSPAWKNFDERFKQFVSDSRNIRFGLATDGFNPY------------ 340
Query: 352 ILVPYNLPPWLCMKQ 366
V YNLPPWLCM +
Sbjct: 341 --VIYNLPPWLCMME 353
>ref|XP_476122.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|48475253|gb|AAT44322.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 551
Score = 273 bits (699), Expect = 5e-72
Identities = 145/349 (41%), Positives = 215/349 (61%), Gaps = 26/349 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGET-IPCPCKKCVLHYVVNRAMAYEHLMVNG 61
++ + Y R S EYL GV FL+ A+++ + +T I CPC CV ++++ Y+H + NG
Sbjct: 7 KILLRYPRGSDEYLTGVHGFLEFAYKDKSEDTKIYCPCGTCVHTMLLSKNDVYDHWVCNG 66
Query: 62 IIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLIHDAFEGFNQSMGNNISDGGD 121
++ SYD W HGES R ++ E R + M LI+DA + D
Sbjct: 67 MLQSYDQWDFHGESSEEQTRNQQPQPHNENMRAN-MHELINDALR--------TVFDDVP 117
Query: 122 IESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSFVLHLYHIKRLFKW 181
+ + D + THT + + E + F +L+KD+ + L+ GC+ S LS ++ L+++K + KW
Sbjct: 118 MSDHADSSCTHT--DGPNLEAQAFYKLVKDSEKPLWDGCE-LSHLSLLVLLFNMKSMNKW 174
Query: 182 TNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNELADK 241
+++SF LL +L A+P G++LP + YE KK+V GL Y++IHACPN+C LF +
Sbjct: 175 SHKSFGDLLDILHMAIPNGKELPKNFYEAKKVVSNFGLDYQQIHACPNNCQLFWKDKV-- 232
Query: 242 NVNKCIKCGASRWKNDE-----------KKVPAKVLRYFPLKSRLQRLFMSSETSRLMRW 290
N + C C ASRWK+ + K P+KVLRYFP+K RL+RLF+ ET+ L RW
Sbjct: 233 NDDFCSTCKASRWKDKKPETKLTKKERKKATPSKVLRYFPIKDRLKRLFICRETASLPRW 292
Query: 291 HDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPY 339
HD+ R +DG LRHPADS AWK FD++ ++FA DSRN++ GLA+DGFNPY
Sbjct: 293 HDEERLEDGALRHPADSPAWKNFDERFKQFASDSRNIQFGLATDGFNPY 341
>gi|38678252 TPA: transposase [Oryza sativa]
Length = 1104
Score = 269 bits (688), Expect = 9e-71
Identities = 152/381 (39%), Positives = 211/381 (54%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLKVAEASRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G IPSY+ W HGE + EE D++ + FEG +DG
Sbjct: 62 GFIPSYNYWTSHGE--------QGVEMEEEEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>gb|AAP52603.1| putative transposon protein [Oryza sativa (japonica
cultivar-group)] gi|37532028|ref|NP_920316.1| putative
transposon protein [Oryza sativa (japonica
cultivar-group)] gi|22748425|gb|AAN05390.1| putative
transposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 1620
Score = 269 bits (688), Expect = 9e-71
Identities = 141/304 (46%), Positives = 182/304 (59%), Gaps = 26/304 (8%)
Query: 72 HGESINVLNRKEETNCRE-EAFRGDDMVGLIHDAFEGFNQSMGNNISDGGDIESNLDENL 130
HGE + +N E + E+ DD+ L+ D G + D G+ E + ++
Sbjct: 3 HGEGSSFVNSAEYDEVGDVESSEHDDISDLLRDLACG--------LDDRGEFEDEGNSDV 54
Query: 131 THTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSFVLHLYHIKRLFKWTNESFDALL 190
T+ N + L D +ELY GC KFSKL F++ L HIK L W+++SFD LL
Sbjct: 55 TNEDLNA-------LKMLSDDYGQELYPGCDKFSKLHFIVKLLHIKLLGGWSDKSFDLLL 107
Query: 191 GLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNELADKNVNKCIKCG 250
LL +A P+G LP ++ E KK V L L Y IHAC NDC+L+ + D N N C KC
Sbjct: 108 NLLIEAFPKGSALPKNYNEAKKTVKCLRLGYVSIHACKNDCILYWKD--DANANSCPKCE 165
Query: 251 ASRWKNDEK--------KVPAKVLRYFPLKSRLQRLFMSSETSRLMRWHDKGRNKDGDLR 302
SRWK++ K KVP KVLRYFP+K R QRLF S T+ L RWHD+ R +DG +R
Sbjct: 166 TSRWKSENKSLNGKRIHKVPNKVLRYFPIKRRFQRLFACSRTAALTRWHDEERTQDGLVR 225
Query: 303 HPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVFDSTWPVILVPYNLPPWL 362
HPADS WK FD +H EFA D RN+R LA+DGFNP+ SM + S WPVI++PYN PPW+
Sbjct: 226 HPADSPLWKDFDHKHPEFASDPRNIRCALATDGFNPFRSMNISYSIWPVIIIPYNFPPWI 285
Query: 363 CMKQ 366
CMKQ
Sbjct: 286 CMKQ 289
>gb|AAP52075.1| putative TNP-like transposable element [Oryza sativa (japonica
cultivar-group)] gi|37530972|ref|NP_919788.1| putative
TNP-like transposable element [Oryza sativa (japonica
cultivar-group)] gi|19919979|gb|AAM08427.1| Putative
TNP-like transposable element [Oryza sativa]
gi|16519462|gb|AAL25171.1| Putative TNP-like
transposable element [Oryza sativa]
Length = 2535
Score = 269 bits (688), Expect = 9e-71
Identities = 152/381 (39%), Positives = 211/381 (54%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLKVAEASRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G IPSY+ W HGE + EE D++ + FEG +DG
Sbjct: 62 GFIPSYNYWTSHGE--------QGVEMEEEEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
Score = 135 bits (340), Expect = 2e-30
Identities = 91/289 (31%), Positives = 143/289 (48%), Gaps = 58/289 (20%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNG-ETIPCPCKKCVLHYVVNRAMAYEHLMVNG 61
R WM+ SKE+ +GV F+D + +G + I CPC++ + L++ G
Sbjct: 2145 RTWMNCKLFSKEHPEGVTEFMDFVSKNLSGSQKILCPCRR-----------VEDDLLMYG 2193
Query: 62 IIPSYDTWFCHGESI-----NVLNRKEETNCREEAFRG--------DDMVGLIHDAFEGF 108
+ +Y W HGE + NV + E+ +C E D M ++ D +
Sbjct: 2194 MSNTYTRWIHHGEPLVMVTENVEHLNEDVSCNVEFETNEPQDDPEDDQMYRMVQDLYP-- 2251
Query: 109 NQSMGNNISDGGDIESNLDENLTHTSRNQSHPEVEKFEQLMKDANEELYSGCKKFSKLSF 168
D+N H R +S KF ++++ + L+ G +++ SF
Sbjct: 2252 ------------------DQN--HGPRTKS-----KFATILEEMKQVLHPG-GPYTRFSF 2285
Query: 169 VLHLYHIKRLFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACP 228
V+ L HIK ++ +N +F A L LL A P LP+S+ E K + LGL YE IH CP
Sbjct: 2286 VVKLLHIKSFYRISNVAFSAFLDLLSSAFPNCS-LPASYAEAKNFIRALGLGYESIHVCP 2344
Query: 229 NDCMLFRNELADKNVNKCIKCGASRWK--NDEKKVPAKVLRYFPLKSRL 275
N+C+LFR ELA ++ C CGASRW+ + +++P KVLR+FPL+ +
Sbjct: 2345 NNCVLFRKELA--KMDACPICGASRWRDADSRRQIPEKVLRHFPLRGEI 2391
>gb|AAU90123.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1132
Score = 268 bits (686), Expect = 1e-70
Identities = 151/381 (39%), Positives = 212/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y V+R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSVSRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNETGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>ref|NP_915592.1| putative TNP2-like transposable element [Oryza sativa (japonica
cultivar-group)]
Length = 1110
Score = 268 bits (684), Expect = 3e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAKANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKRNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>emb|CAD41539.2| OSJNBb0091E11.7 [Oryza sativa (japonica cultivar-group)]
gi|50925843|ref|XP_473008.1| OSJNBb0091E11.7 [Oryza
sativa (japonica cultivar-group)]
Length = 1127
Score = 268 bits (684), Expect = 3e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHHFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLIKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>gb|AAX96305.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
(japonica cultivar-group)] gi|62734089|gb|AAX96198.1|
transposon protein, putative, CACTA, En/Spm sub-class
[Oryza sativa (japonica cultivar-group)]
Length = 2406
Score = 267 bits (683), Expect = 3e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 262 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 320
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 321 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 372
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 373 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRNSLYPGCEQGHKKLDTTLELLQWKA 432
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 433 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 492
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 493 EYE-NLEACPVCKALRYKIRRDDPGEVNGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 551
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 552 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 611
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 612 HSTWPVTMCIYNLPPWLCMKR 632
>gi|38678228 TPA: transposase [Oryza sativa] gi|34911856|ref|NP_917275.1|
putative TNP-like transposable element [Oryza sativa
(japonica cultivar-group)]
Length = 1110
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>gb|AAP53741.1| putative rice tungro bacilliform virus; reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
gi|37534304|ref|NP_921454.1| putative rice tungro
bacilliform virus; reverse transcriptase [Oryza sativa
(japonica cultivar-group)]
Length = 2877
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 96 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 154
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 155 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 206
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 207 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 266
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 267 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 326
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 327 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 385
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 386 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 445
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 446 HSTWPVTMCIYNLPPWLCMKR 466
>gb|AAP52539.1| putative transposon protein [Oryza sativa (japonica
cultivar-group)] gi|62733453|gb|AAX95570.1| Transposase
family tnp2, putative [Oryza sativa (japonica
cultivar-group)] gi|37531900|ref|NP_920252.1| putative
transposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 1088
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLLDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>ref|XP_474660.1| OSJNBa0052P16.11 [Oryza sativa (japonica cultivar-group)]
gi|38569206|emb|CAD39720.3| OSJNBa0052P16.11 [Oryza
sativa (japonica cultivar-group)]
Length = 1110
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>ref|XP_470081.1| putative transposase [Oryza sativa (japonica cultivar-group)]
gi|40786573|gb|AAR89848.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 1110
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>gb|AAU90267.1| Transposase family protein [Oryza sativa (japonica cultivar-group)]
Length = 1110
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
>gb|AAX95556.1| Transposase family tnp2, putative [Oryza sativa (japonica
cultivar-group)]
Length = 1097
Score = 267 bits (682), Expect = 4e-70
Identities = 150/381 (39%), Positives = 211/381 (55%), Gaps = 27/381 (7%)
Query: 3 RMWMDYDRVSKEYLDGVESFLDHAFRESNGETIPCPCKKCV--LHYVVNRAMAYEHLMVN 60
R WM DR SKE++DGV FL A I CPC KC Y +R + + HL +
Sbjct: 3 RQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSASRTIHF-HLFES 61
Query: 61 GIIPSYDTWFCHGESINVLNRKEETNCREEAFRGDDMVGLI-HDAFEGFNQSMGNNISDG 119
G +PSY+ W HGE + E+ D++ + FEG +DG
Sbjct: 62 GFMPSYNCWTSHGE--------QGVEMEEDEVEDDNIPDFAQYVGFEGNQTGEEEIAADG 113
Query: 120 GDIESNLDENLTHTSRN-QSHPEVEKFEQLMKDANEELYSGCKK-FSKLSFVLHLYHIKR 177
D+ +L + L + +S E K +++++D LY GC++ KL L L K
Sbjct: 114 NDVADDLGQMLLDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQWKA 173
Query: 178 LFKWTNESFDALLGLLKDALPEGEKLPSSHYETKKIVGRLGLKYEKIHACPNDCMLFRNE 237
++++F LL L+K+ LP G KLP + YE KKIV LGL+ KIHACPNDC+L+R E
Sbjct: 174 KNGVSDKAFGDLLKLVKNILPGGNKLPETTYEAKKIVCPLGLEVHKIHACPNDCILYRGE 233
Query: 238 LADKNVNKCIKCGASRWKN------------DEKKVPAKVLRYFPLKSRLQRLFMSSETS 285
+ N+ C C A R+K +K++PAKV+ YFP+ RL+RLF + +
Sbjct: 234 EYE-NLEACPVCKALRYKIRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNA 292
Query: 286 RLMRWHDKGRNKDGDLRHPADSEAWKKFDDQHQEFAKDSRNVRLGLASDGFNPYSSMKVF 345
R++RWH + R +DG LRHPAD W+ D + +EF KD+RN+R GL++DG NP+ M
Sbjct: 293 RMLRWHAEERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMSSG 352
Query: 346 DSTWPVILVPYNLPPWLCMKQ 366
STWPV + YNLPPWLCMK+
Sbjct: 353 HSTWPVTMCIYNLPPWLCMKR 373
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 674,606,079
Number of Sequences: 2540612
Number of extensions: 29313693
Number of successful extensions: 73227
Number of sequences better than 10.0: 455
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 71576
Number of HSP's gapped (non-prelim): 552
length of query: 368
length of database: 863,360,394
effective HSP length: 129
effective length of query: 239
effective length of database: 535,621,446
effective search space: 128013525594
effective search space used: 128013525594
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0121b.8