BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0121b.6
(378 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 234 4e-60
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 223 7e-57
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 220 5e-56
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 208 2e-52
gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cult... 206 7e-52
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 206 7e-52
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 204 3e-51
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 204 3e-51
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 204 3e-51
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 202 2e-50
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 202 2e-50
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 202 2e-50
ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana] 201 4e-50
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 200 5e-50
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar... 199 9e-50
gb|AAC28215.1| contains similarity to helicases [Arabidopsis tha... 199 9e-50
ref|NP_680578.1| hypothetical protein [Arabidopsis thaliana] 199 9e-50
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 191 2e-47
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 191 2e-47
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 191 3e-47
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 234 bits (596), Expect = 4e-60
Identities = 117/210 (55%), Positives = 151/210 (71%), Gaps = 1/210 (0%)
Query: 143 PLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYLNCDTP 202
P+ I N YP LL NL +FF+ERAIL PT + V E+NN ++ ++ GE EY + D
Sbjct: 1063 PIDSIANCVYPNLLQNLNDQTFFRERAILCPTNDDVSEVNNHIMDLLPGEVKEYFSSDKI 1122
Query: 203 CKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNGTRMIV 262
C D +A +++EFLN KCSG+PNH ++LK+GVP+MLIRN+DQ GLCNGTR+ V
Sbjct: 1123 CDFDTSVERDAN-MSTEFLNAIKCSGVPNHVLRLKLGVPVMLIRNLDQKYGLCNGTRLQV 1181
Query: 263 NALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTINKSQG 322
L +I A VL + G ++PR+ LTP++ IPF+FQRRQFPV+ CF MTINKSQG
Sbjct: 1182 TQLGDRVIEAKVLTGSNAGNKVYLPRLVLTPADFRIPFRFQRRQFPVVPCFGMTINKSQG 1241
Query: 323 QSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
QS +HVG+YLPRPVF+H QLYVA+SRVKSR
Sbjct: 1242 QSLSHVGIYLPRPVFSHGQLYVAVSRVKSR 1271
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 223 bits (568), Expect = 7e-57
Identities = 111/212 (52%), Positives = 145/212 (68%)
Query: 142 DPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYLNCDT 201
DP EIV YP L+ N +K F ++RAIL P E+ EIN F++ MI GEEI YL+CDT
Sbjct: 1397 DPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETAREINEFIMNMIEGEEITYLSCDT 1456
Query: 202 PCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNGTRMI 261
CK+ + +EFLN G+PNH +KLKVG+P+ML+RNI+Q++GLCNGTRM
Sbjct: 1457 VCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNGTRMT 1516
Query: 262 VNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTINKSQ 321
+ L K I A ++ +GE +IPR+ +TP+ + PF +RRQ+P+ +CFAMTINKSQ
Sbjct: 1517 ITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKSQ 1576
Query: 322 GQSSTHVGLYLPRPVFTHVQLYVALSRVKSRN 353
GQS VGLYLP+ VFTH QLYVA SRV R+
Sbjct: 1577 GQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRD 1608
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 220 bits (561), Expect = 5e-56
Identities = 109/212 (51%), Positives = 145/212 (67%)
Query: 142 DPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYLNCDT 201
DP EIV YP L+ N +K F ++RAIL P E+ +IN F++ MI GEEI YL+CDT
Sbjct: 1288 DPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETARKINEFIMNMIEGEEITYLSCDT 1347
Query: 202 PCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNGTRMI 261
CK+ + +EFLN G+PNH +KLK+G+P+ML+RNI+Q++GLCNGTRM
Sbjct: 1348 VCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNGTRMT 1407
Query: 262 VNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTINKSQ 321
+ L K I A ++ +GE +IPR+ +TP+ + PF +RRQ+P+ +CFAMTINKSQ
Sbjct: 1408 ITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKSQ 1467
Query: 322 GQSSTHVGLYLPRPVFTHVQLYVALSRVKSRN 353
GQS VGLYLP+ VFTH QLYVA SRV R+
Sbjct: 1468 GQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRD 1499
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 208 bits (529), Expect = 2e-52
Identities = 105/219 (47%), Positives = 147/219 (66%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEI 194
+ ++ DP +IV+ +YP L +N K + +ERAIL PT + V E+N +++ I G+++
Sbjct: 1328 LLLQKGDDPKAQIVDSTYPGLQYNCCKPKYLEERAILCPTNDDVNELNEYIMDQIQGDKV 1387
Query: 195 EYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGL 254
YL+ D+ KS S +EFLN K GIPNHQ+KLKVG+P+ML+RNI+Q AGL
Sbjct: 1388 TYLSHDSVSKSMSYSHEMEMLYPTEFLNSLKHPGIPNHQLKLKVGLPVMLLRNINQNAGL 1447
Query: 255 CNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFA 314
CNGTRM + K +I A ++ +G+ IP++ ++P+ PF R+QFP+ +CFA
Sbjct: 1448 CNGTRMRITRFGKRVIEAEIITGTHIGDMVCIPQIIMSPNERKWPFVLNRKQFPLSVCFA 1507
Query: 315 MTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSRN 353
MTINKSQGQ+ VGLYLPR VFTH QLYVA+SRV SR+
Sbjct: 1508 MTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRD 1546
>gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1477
Score = 206 bits (525), Expect = 7e-52
Identities = 104/219 (47%), Positives = 146/219 (66%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEI 194
+ ++ DP +I+ +YP L N K ++ +ERAIL P E+V E+N +++ I G+++
Sbjct: 1232 LLLQKGDDPKAQIIESTYPDLQDNCCKQNYLEERAILCPVNENVNELNEYIMDQIQGDKV 1291
Query: 195 EYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGL 254
YL+ D+ KS S +EFLN SGIPNHQ+KLKVG+P+ML+RNI+Q+AGL
Sbjct: 1292 TYLSRDSVSKSVSYSHEMEMLYPTEFLNSLNHSGIPNHQLKLKVGLPVMLLRNINQSAGL 1351
Query: 255 CNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFA 314
CNGTRM + L +I A ++ G+ IP++ ++P+ PF R+QFP+ +CFA
Sbjct: 1352 CNGTRMTITRLGNKVIEAQIITGTHSGDMVCIPQIIMSPTEPKWPFMLNRKQFPLSVCFA 1411
Query: 315 MTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSRN 353
MTINKSQGQ+ VGLYLPR VFTH QLYVA+SRV SR+
Sbjct: 1412 MTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRD 1450
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 206 bits (525), Expect = 7e-52
Identities = 104/219 (47%), Positives = 146/219 (66%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEI 194
+ ++ DP +I+ +YP L N K ++ +ERAIL P E+V E+N +++ I G+++
Sbjct: 1256 LLLQKGDDPKAQIIESTYPDLQDNCCKQNYLEERAILCPVNENVNELNEYIMDQIQGDKV 1315
Query: 195 EYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGL 254
YL+ D+ KS S +EFLN SGIPNHQ+KLKVG+P+ML+RNI+Q+AGL
Sbjct: 1316 TYLSRDSVSKSVSYSHEMEMLYPTEFLNSLNHSGIPNHQLKLKVGLPVMLLRNINQSAGL 1375
Query: 255 CNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFA 314
CNGTRM + L +I A ++ G+ IP++ ++P+ PF R+QFP+ +CFA
Sbjct: 1376 CNGTRMTITRLGNKVIEAQIITGTHSGDMVCIPQIIMSPTEPKWPFMLNRKQFPLSVCFA 1435
Query: 315 MTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSRN 353
MTINKSQGQ+ VGLYLPR VFTH QLYVA+SRV SR+
Sbjct: 1436 MTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRD 1474
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 204 bits (520), Expect = 3e-51
Identities = 107/220 (48%), Positives = 143/220 (64%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGE 192
+ I P+ I N Y PK+L + FFQ RAILAP E V IN ++L + E
Sbjct: 480 LLITNADKPIETITNEIYGDPKILHEITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAE 539
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
E YL+ D+ +D DS +N +T +FLN K G+PNH + LKVG P+ML+RN+D
Sbjct: 540 ERIYLSADSIDPTDSDS-LNNPVITPDFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKG 598
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ + L I+ A V+ + +G IP ++LTP++ +PFK +RRQFP+ +
Sbjct: 599 GLCNGTRLQITQLCTQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVA 658
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
FAMTINKSQGQS H+GLYLP+PVF+H QLYVALSRV S+
Sbjct: 659 FAMTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSK 698
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 204 bits (520), Expect = 3e-51
Identities = 107/220 (48%), Positives = 143/220 (64%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGE 192
+ I P+ I N Y PK+L + FFQ RAILAP E V IN ++L + E
Sbjct: 1429 LLITNADKPIETITNEIYGDPKILHEITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAE 1488
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
E YL+ D+ +D DS +N +T +FLN K G+PNH + LKVG P+ML+RN+D
Sbjct: 1489 ERIYLSADSIDPTDSDS-LNNPVITPDFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKG 1547
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ + L I+ A V+ + +G IP ++LTP++ +PFK +RRQFP+ +
Sbjct: 1548 GLCNGTRLQITQLCTQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVA 1607
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
FAMTINKSQGQS H+GLYLP+PVF+H QLYVALSRV S+
Sbjct: 1608 FAMTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSK 1647
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 204 bits (520), Expect = 3e-51
Identities = 107/220 (48%), Positives = 146/220 (65%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGE 192
+ I+ +P+ I Y P L + FFQ RAILAPT E V IN +ML + E
Sbjct: 1503 LLIKEAGNPIEAISKEIYGDPSELHMINDPKFFQRRAILAPTNEDVNTINQYMLEHLKSE 1562
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
E YL+ D+ +D DS N +T +FLN + +G+P+H ++LKVG P+ML+RN+D
Sbjct: 1563 ERIYLSADSIDPTDSDSLANPV-ITPDFLNSIQLTGMPHHALRLKVGAPVMLLRNLDPKG 1621
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ + L K ++ A V+ R+ +G+ IP ++LTPS+ +PFK +RRQFP+ +
Sbjct: 1622 GLCNGTRLQITQLAKQVVQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVA 1681
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
FAMTINKSQGQS VGLYLP+PVF+H QLYVALSRV S+
Sbjct: 1682 FAMTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSK 1721
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 202 bits (513), Expect = 2e-50
Identities = 104/211 (49%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
Query: 142 DPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYLNCDT 201
DP+ I+ Y + FFQ RAIL PT E V IN M++M+ GEE YL+ D+
Sbjct: 781 DPVESIIEAVYGNTFMEEKDPKFFQGRAILCPTNEDVNSINEHMMSMLDGEERIYLSSDS 840
Query: 202 PCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNGTRMI 261
+D S N + +++FLN + SG+PNH ++LKVG P+ML+RN+D GLCNGTR+
Sbjct: 841 IDPADTSSANNDAY-SADFLNSVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGTRLQ 899
Query: 262 VNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTINKSQ 321
V + +I A + N +G+ IPRM +TPS+ +PFK +RRQFP+ + FAMTINKSQ
Sbjct: 900 VTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTINKSQ 959
Query: 322 GQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
GQ+ VGLYLPRPVF+H QLYVA+SRV S+
Sbjct: 960 GQTLESVGLYLPRPVFSHGQLYVAISRVTSK 990
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 202 bits (513), Expect = 2e-50
Identities = 106/220 (48%), Positives = 144/220 (65%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGE 192
+ I+ +P+ I Y P L + FFQ RAILAP E V IN +ML + E
Sbjct: 1180 LLIQEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSE 1239
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
E YL+ D+ SD DS N +T +FLN K SG+P+H ++LKVG P+ML+RN+D
Sbjct: 1240 ERIYLSADSIDPSDSDSLKNPV-ITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKG 1298
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ + L +I+ A V+ + +G+ +IP +++TPS+ +PFK +RRQFP+ +
Sbjct: 1299 GLCNGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVA 1358
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
F MTINKSQGQS VGLYLP+PVF+H QLYVALSRV S+
Sbjct: 1359 FVMTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSK 1398
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 202 bits (513), Expect = 2e-50
Identities = 106/220 (48%), Positives = 144/220 (65%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGE 192
+ I+ +P+ I Y P L + FFQ RAILAP E V IN +ML + E
Sbjct: 1171 LLIQEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSE 1230
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
E YL+ D+ SD DS N +T +FLN K SG+P+H ++LKVG P+ML+RN+D
Sbjct: 1231 ERIYLSADSIDPSDSDSLKNPV-ITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKG 1289
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ + L +I+ A V+ + +G+ +IP +++TPS+ +PFK +RRQFP+ +
Sbjct: 1290 GLCNGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVA 1349
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
F MTINKSQGQS VGLYLP+PVF+H QLYVALSRV S+
Sbjct: 1350 FVMTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSK 1389
>ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana]
Length = 1033
Score = 201 bits (510), Expect = 4e-50
Identities = 104/212 (49%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 143 PLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYLNCD 200
P+ I N Y PK+L + FFQ RAILAPT E V IN ++L + EE YL+ D
Sbjct: 792 PIESITNEIYGDPKILHEITDPKFFQGRAILAPTNEDVNTINEYLLEQLHAEERIYLSAD 851
Query: 201 TPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNGTRM 260
+ +D +S +N +T +FLN K +G+PNH ++LKV P+ML+RN+D GLCNGTR+
Sbjct: 852 SIDPTDSNS-LNNPVITPDFLNSIKLAGLPNHSLRLKVSAPVMLLRNLDPKGGLCNGTRL 910
Query: 261 IVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTINKS 320
+ L I+ A V+ + +G IP ++LTP++ +PFK +RRQFP+ + FAMTIN S
Sbjct: 911 QITQLCTQIVEAKVITGDIIGHIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTS 970
Query: 321 QGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
QGQS HVGLYLP+ VF+H QLYVALSRV S+
Sbjct: 971 QGQSLEHVGLYLPKAVFSHGQLYVALSRVTSK 1002
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 200 bits (509), Expect = 5e-50
Identities = 105/220 (47%), Positives = 141/220 (63%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSY--PKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGE 192
+ I P+ I N Y PK+L + FFQ RAILA E V IN ++L + E
Sbjct: 1033 LLITNADKPIESITNEIYGDPKILHEITDPKFFQGRAILASKNEDVNTINEYLLDQLHAE 1092
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
E YL+ D+ +D DS N +T +FLN K G+PNH ++LKVG P++L+RN+D
Sbjct: 1093 ERIYLSADSIDPTDSDSLSNPV-ITPDFLNSIKLPGLPNHSLRLKVGAPVLLLRNLDPKG 1151
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ + L I+ A V+ + +G IP ++LTP+N +PFK +RRQFP+ +
Sbjct: 1152 GLCNGTRLQITQLCTQIVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVA 1211
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
F MTINKS+GQS HVGLYLP+PVF+H QLYVALSRV S+
Sbjct: 1212 FVMTINKSEGQSLEHVGLYLPKPVFSHGQLYVALSRVTSK 1251
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)]
Length = 2052
Score = 199 bits (507), Expect = 9e-50
Identities = 98/219 (44%), Positives = 147/219 (66%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEI 194
+ I+ D + +++ +P LL N ++ RAI+ P +V++INN+++ ++ GEE
Sbjct: 1171 LLIKTDGDKIPALIDEVFPDLLHNHTDPTYLSCRAIVCPNNGTVDDINNYVVGLLPGEEK 1230
Query: 195 EYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGL 254
EYL+CDT KS E +EF N + PNH++ LK GV IML+RN++Q+ GL
Sbjct: 1231 EYLSCDTIAKSSEHIPDLDLLYPTEFPNSINVNNFPNHRLVLKKGVIIMLLRNLNQSMGL 1290
Query: 255 CNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFA 314
CNGTR+++N L ++++ +L + +GE F+PR+SL +N+ PF QRRQFPV +C+A
Sbjct: 1291 CNGTRLLINVLGEWVLQRTILTGSKIGEIVFVPRISLNTTNSKWPFTLQRRQFPVRVCYA 1350
Query: 315 MTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSRN 353
MTINKSQGQ+ +HVG+YL +PVFTH QLYV +SR SR+
Sbjct: 1351 MTINKSQGQTLSHVGVYLKKPVFTHGQLYVVISRATSRS 1389
>gb|AAC28215.1| contains similarity to helicases [Arabidopsis thaliana]
gi|7487403|pir||T01873 hypothetical protein T24M8.10 -
Arabidopsis thaliana
Length = 258
Score = 199 bits (507), Expect = 9e-50
Identities = 105/215 (48%), Positives = 143/215 (65%), Gaps = 3/215 (1%)
Query: 138 EPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYL 197
+P K LEI P LL + F QERAIL+PT E V IN +L + GEEI+YL
Sbjct: 38 DPIKAISLEICGD--PTLLLENKDLKFIQERAILSPTNEDVNTINQRLLEKLPGEEIQYL 95
Query: 198 NCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNG 257
+ D+ SD S N + T +FLN K SG+PNH ++L +G PIML+RN+D GLCNG
Sbjct: 96 SIDSIDLSDTTSEYNPVF-TPDFLNSIKISGLPNHCLRLNIGAPIMLLRNLDPKGGLCNG 154
Query: 258 TRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTI 317
TR+ + +T I+ A+++ +G+ I ++ +TPS+ +PF +R+QFP+++ FAMTI
Sbjct: 155 TRLQMIQMTPPILQAVIITGGRIGDKVLISKILITPSDTKLPFNMRRKQFPIVVAFAMTI 214
Query: 318 NKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
NKSQGQS +GLYLPRPVF+H QLYVALSRV S+
Sbjct: 215 NKSQGQSLKEIGLYLPRPVFSHDQLYVALSRVTSK 249
>ref|NP_680578.1| hypothetical protein [Arabidopsis thaliana]
Length = 251
Score = 199 bits (507), Expect = 9e-50
Identities = 105/215 (48%), Positives = 143/215 (65%), Gaps = 3/215 (1%)
Query: 138 EPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEIEYL 197
+P K LEI P LL + F QERAIL+PT E V IN +L + GEEI+YL
Sbjct: 31 DPIKAISLEICGD--PTLLLENKDLKFIQERAILSPTNEDVNTINQRLLEKLPGEEIQYL 88
Query: 198 NCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGLCNG 257
+ D+ SD S N + T +FLN K SG+PNH ++L +G PIML+RN+D GLCNG
Sbjct: 89 SIDSIDLSDTTSEYNPVF-TPDFLNSIKISGLPNHCLRLNIGAPIMLLRNLDPKGGLCNG 147
Query: 258 TRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFAMTI 317
TR+ + +T I+ A+++ +G+ I ++ +TPS+ +PF +R+QFP+++ FAMTI
Sbjct: 148 TRLQMIQMTPPILQAVIITGGRIGDKVLISKILITPSDTKLPFNMRRKQFPIVVAFAMTI 207
Query: 318 NKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
NKSQGQS +GLYLPRPVF+H QLYVALSRV S+
Sbjct: 208 NKSQGQSLKEIGLYLPRPVFSHDQLYVALSRVTSK 242
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 191 bits (486), Expect = 2e-47
Identities = 103/218 (47%), Positives = 139/218 (63%), Gaps = 1/218 (0%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEI 194
I I +P+ I+ Y FFQ+RAIL PT + V IN+ ML+ + GEE
Sbjct: 1423 ILIPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEK 1482
Query: 195 EYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGL 254
Y + D+ SD + N + T +FLN K SG+PNH + LKVG P+ML+RN+D GL
Sbjct: 1483 IYRSSDSIDPSDTRADKNPVY-TPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGL 1541
Query: 255 CNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFA 314
NGTR+ + L ++ +L +G+ IPRM LTPS+ +PFK +RRQFP+ + FA
Sbjct: 1542 MNGTRLQIVRLGDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFA 1601
Query: 315 MTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
MTINKSQGQS +VG+YLP+PVF+H QLYVA+SRVKS+
Sbjct: 1602 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSK 1639
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 191 bits (486), Expect = 2e-47
Identities = 103/218 (47%), Positives = 139/218 (63%), Gaps = 1/218 (0%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNSFFQERAILAPTLESVEEINNFMLAMILGEEI 194
I I +P+ I+ Y FFQ+RAIL PT + V IN+ ML+ + GEE
Sbjct: 1227 ILIPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEK 1286
Query: 195 EYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTAGL 254
Y + D+ SD + N + T +FLN K SG+PNH + LKVG P+ML+RN+D GL
Sbjct: 1287 IYRSSDSIDPSDTRADKNPVY-TPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGL 1345
Query: 255 CNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILCFA 314
NGTR+ + L ++ +L +G+ IPRM LTPS+ +PFK +RRQFP+ + FA
Sbjct: 1346 MNGTRLQIVRLGDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFA 1405
Query: 315 MTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
MTINKSQGQS +VG+YLP+PVF+H QLYVA+SRVKS+
Sbjct: 1406 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSK 1443
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 191 bits (485), Expect = 3e-47
Identities = 101/220 (45%), Positives = 139/220 (62%), Gaps = 3/220 (1%)
Query: 135 IFIEPCKDPLLEIVNFSYPKLLFNLEKNS--FFQERAILAPTLESVEEINNFMLAMILGE 192
+ I+ DP+ I Y L N FFQ+RAIL P V IN+ ML + GE
Sbjct: 849 LLIKDANDPIEAITKAVYGDLDLLQPNNDPKFFQQRAILCPRNTDVNTINDIMLDKLNGE 908
Query: 193 EIEYLNCDTPCKSDEDSGVNAEWVTSEFLNDYKCSGIPNHQIKLKVGVPIMLIRNIDQTA 252
+ YL+ D+ D S +N +T +FLN K SG+PNH + LK+G P+ML+RNID
Sbjct: 909 LVTYLSADSIDPQDAAS-LNNPVLTPDFLNSIKLSGLPNHNLTLKIGTPVMLLRNIDPKG 967
Query: 253 GLCNGTRMIVNALTKYIIVAIVLNRNTMGETTFIPRMSLTPSNADIPFKFQRRQFPVILC 312
GLCNGTR+ V + +I+ A V+ + +G+ I + ++PS+ +PF+ +RRQFP+ +
Sbjct: 968 GLCNGTRLQVTQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIAVA 1027
Query: 313 FAMTINKSQGQSSTHVGLYLPRPVFTHVQLYVALSRVKSR 352
FAMTINKSQGQS VG+YLP+PVF+H QLYVALSRV S+
Sbjct: 1028 FAMTINKSQGQSLKEVGIYLPKPVFSHGQLYVALSRVTSK 1067
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.343 0.151 0.491
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,955,722
Number of Sequences: 2540612
Number of extensions: 20397538
Number of successful extensions: 72651
Number of sequences better than 10.0: 233
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 72248
Number of HSP's gapped (non-prelim): 298
length of query: 378
length of database: 863,360,394
effective HSP length: 130
effective length of query: 248
effective length of database: 533,080,834
effective search space: 132204046832
effective search space used: 132204046832
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0121b.6