BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0117b.7
(281 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182050.2| expressed protein [Arabidopsis thaliana] 113 7e-24
gb|AAP21363.1| At4g38290 [Arabidopsis thaliana] gi|22655230|gb|A... 109 1e-22
dbj|BAD44339.1| putative protein [Arabidopsis thaliana] 107 3e-22
gb|AAB82645.1| unknown protein [Arabidopsis thaliana] gi|2534193... 104 2e-21
emb|CAB80493.1| putative protein [Arabidopsis thaliana] gi|45393... 84 3e-15
dbj|BAD33742.1| unknown protein [Oryza sativa (japonica cultivar... 84 4e-15
ref|XP_471232.1| OSJNBa0095E20.6 [Oryza sativa (japonica cultiva... 79 1e-13
ref|XP_585105.1| PREDICTED: similar to trinucleotide repeat cont... 43 0.011
gb|AAW25443.1| unknown [Schistosoma japonicum] 39 0.22
gb|EAL89601.1| N-terminal acetyltransferase catalytic subunit (N... 38 0.28
ref|NP_775605.1| hypothetical protein LOC243372 [Mus musculus] g... 38 0.28
gb|EAA55468.1| hypothetical protein MG09275.4 [Magnaporthe grise... 38 0.37
gb|AAP94225.1| rtp12.5 [Oncorhynchus mykiss] 37 0.48
dbj|BAC03887.1| unnamed protein product [Homo sapiens] 37 0.63
emb|CAD43138.1| cell envelope-associated proteinase PrtR [Lactob... 37 0.63
ref|XP_308229.2| ENSANGP00000020719 [Anopheles gambiae str. PEST... 37 0.82
emb|CAG04486.1| unnamed protein product [Tetraodon nigroviridis] 36 1.1
pir||S50832 atrophin-1 - human 36 1.4
ref|NP_001931.2| atrophin-1 [Homo sapiens] gi|55750053|ref|NP_00... 36 1.4
gb|AAG51929.1| unknown protein; 17658-16304 [Arabidopsis thalian... 36 1.4
>ref|NP_182050.2| expressed protein [Arabidopsis thaliana]
Length = 204
Score = 113 bits (282), Expect = 7e-24
Identities = 85/231 (36%), Positives = 113/231 (48%), Gaps = 68/231 (29%)
Query: 41 KDKDPDTDSNRIS--GTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAF 98
KD + + + +S G K+P D P + A+G LVYVRR+ E + K AA
Sbjct: 39 KDSEKAIEQDTVSSIGVKKPPVDSPAT--------TNAASGRLVYVRRRVEVDTSKAAA- 89
Query: 99 ENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISC 158
T P P P AP P +P S
Sbjct: 90 -------------------STTNPNPP---------PTKAP------------PQIPSS- 108
Query: 159 GKSTMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQML 218
P ++ + PT + K + WEERY LQMLL KL+QSD+ ++VQML
Sbjct: 109 --------PAQAQ----AQEPTPTSHK----LDWEERYLHLQMLLNKLNQSDRTDHVQML 152
Query: 219 QSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAKKFKAPAD 269
SLSS ELS+HAV+LEKR+IQ SLEEA+E+QRVA LNVLG+S K+ ++
Sbjct: 153 WSLSSAELSKHAVDLEKRSIQFSLEEAREMQRVAALNVLGRSVNSIKSTSN 203
>gb|AAP21363.1| At4g38290 [Arabidopsis thaliana] gi|22655230|gb|AAM98205.1|
putative protein [Arabidopsis thaliana]
gi|30691877|ref|NP_195541.2| expressed protein
[Arabidopsis thaliana] gi|51970242|dbj|BAD43813.1|
putative protein [Arabidopsis thaliana]
gi|51969630|dbj|BAD43507.1| putative protein
[Arabidopsis thaliana] gi|51969484|dbj|BAD43434.1|
putative protein [Arabidopsis thaliana]
Length = 170
Score = 109 bits (272), Expect = 1e-22
Identities = 79/228 (34%), Positives = 105/228 (45%), Gaps = 70/228 (30%)
Query: 42 DKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENP 101
+K + DS G K+P + P + A+G LVYVRR+ E + K AA
Sbjct: 12 EKANEQDSVSSIGAKKPPLESPAT--------TNAASGRLVYVRRRVEVDTSKAAA---- 59
Query: 102 TNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKS 161
T P P P AP + SS + P+
Sbjct: 60 ----------------STTNPNPP---------PTKAPLQIPSSPAQEPTPTSH------ 88
Query: 162 TMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSL 221
+ WEERY LQMLL KL+QSD+ ++VQML SL
Sbjct: 89 ---------------------------KLDWEERYLHLQMLLNKLNQSDRTDHVQMLWSL 121
Query: 222 SSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAKKFKAPAD 269
SS ELS+HAV+LEKR+IQ SLEEA+E+QRVA LN+LG+S K+ ++
Sbjct: 122 SSAELSKHAVDLEKRSIQFSLEEAREMQRVAALNMLGRSVNSLKSTSN 169
>dbj|BAD44339.1| putative protein [Arabidopsis thaliana]
Length = 170
Score = 107 bits (268), Expect = 3e-22
Identities = 79/228 (34%), Positives = 104/228 (44%), Gaps = 70/228 (30%)
Query: 42 DKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENP 101
+K + DS G K+P + P + A+G LVYVRR+ E + K AA
Sbjct: 12 EKANEQDSVSSIGAKKPPLESPAT--------TNAASGRLVYVRRRVEVDTSKAAA---- 59
Query: 102 TNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKS 161
T P P P AP + SS + P+
Sbjct: 60 ----------------STTNPNPP---------PTKAPLQIPSSPAQEPTPTSH------ 88
Query: 162 TMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSL 221
+ WEERY LQMLL KL+QSD+ + VQML SL
Sbjct: 89 ---------------------------KLDWEERYLHLQMLLNKLNQSDRTDRVQMLWSL 121
Query: 222 SSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAKKFKAPAD 269
SS ELS+HAV+LEKR+IQ SLEEA+E+QRVA LN+LG+S K+ ++
Sbjct: 122 SSAELSKHAVDLEKRSIQFSLEEAREMQRVAALNMLGRSVNSLKSTSN 169
>gb|AAB82645.1| unknown protein [Arabidopsis thaliana] gi|25341933|pir||C84888
hypothetical protein At2g45250 [imported] - Arabidopsis
thaliana
Length = 211
Score = 104 bits (260), Expect = 2e-21
Identities = 84/238 (35%), Positives = 113/238 (47%), Gaps = 75/238 (31%)
Query: 41 KDKDPDTDSNRIS--GTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAF 98
KD + + + +S G K+P D P + A+G LVYVRR+ E + K AA
Sbjct: 39 KDSEKAIEQDTVSSIGVKKPPVDSPAT--------TNAASGRLVYVRRRVEVDTSKAAA- 89
Query: 99 ENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISC 158
T P P P AP P +P S
Sbjct: 90 -------------------STTNPNPP---------PTKAP------------PQIPSS- 108
Query: 159 GKSTMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQ-- 216
P ++ + PT + K + WEERY LQMLL KL+QSD+ ++VQ
Sbjct: 109 --------PAQAQ----AQEPTPTSHK----LDWEERYLHLQMLLNKLNQSDRTDHVQNM 152
Query: 217 -----MLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAKKFKAPAD 269
+L SLSS ELS+HAV+LEKR+IQ SLEEA+E+QRVA LNVLG+S K+ ++
Sbjct: 153 FPLLLVLWSLSSAELSKHAVDLEKRSIQFSLEEAREMQRVAALNVLGRSVNSIKSTSN 210
>emb|CAB80493.1| putative protein [Arabidopsis thaliana] gi|4539336|emb|CAB37484.1|
putative protein [Arabidopsis thaliana]
gi|7485959|pir||T05656 hypothetical protein F22I13.50 -
Arabidopsis thaliana
Length = 159
Score = 84.3 bits (207), Expect = 3e-15
Identities = 67/203 (33%), Positives = 86/203 (42%), Gaps = 70/203 (34%)
Query: 42 DKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENP 101
+K + DS G K+P + P + A+G LVYVRR+ E + K AA
Sbjct: 12 EKANEQDSVSSIGAKKPPLESPAT--------TNAASGRLVYVRRRVEVDTSKAAA---- 59
Query: 102 TNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKS 161
T P P P AP + SS + P+
Sbjct: 60 ----------------STTNPNPP---------PTKAPLQIPSSPAQEPTPTSH------ 88
Query: 162 TMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSL 221
+ WEERY LQMLL KL+QSD+ ++VQML SL
Sbjct: 89 ---------------------------KLDWEERYLHLQMLLNKLNQSDRTDHVQMLWSL 121
Query: 222 SSVELSRHAVELEKRAIQLSLEE 244
SS ELS+HAV+LEKR+IQ SLEE
Sbjct: 122 SSAELSKHAVDLEKRSIQFSLEE 144
>dbj|BAD33742.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 425
Score = 84.0 bits (206), Expect = 4e-15
Identities = 56/152 (36%), Positives = 83/152 (53%), Gaps = 5/152 (3%)
Query: 109 PPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLT-SSISSSGRPSVPISCGKSTMKLAP 167
PPR L S T +P+ + S A A P +S + + S+ + S++
Sbjct: 254 PPRNLVST--TPVPRNPIAANVASSSVAAASPPRNLASTTKVSQNSIAANLASSSVSATS 311
Query: 168 VESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSLSSVELS 227
S + P +P+ + W+ER+ +LQ LR +QS Q EY+ ML+SLSSV S
Sbjct: 312 TASRGAAPACYPV--DPQRSSNQDWKERFIRLQAFLRNNEQSGQEEYIHMLRSLSSVGRS 369
Query: 228 RHAVELEKRAIQLSLEEAKELQRVAVLNVLGK 259
+ A+ELE RA++L +EE KELQ++ VLNVL K
Sbjct: 370 KLAIELENRAVKLLIEEGKELQKMKVLNVLNK 401
Score = 53.5 bits (127), Expect = 6e-06
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 3 LPNRDKQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSDY 62
+P D ++ KK A R+ + K + +S KDK T G KRP +
Sbjct: 1 MPAGDNPHSISEKKAALRESPKEPKNVGNQQPRTSPFPKDKAAGT-----VGIKRPQPNG 55
Query: 63 PVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETALP 122
P+N P N NGHLVYVRR+ E + K +++ + + + S ++T +
Sbjct: 56 PLN------PTNPGTNGHLVYVRRRLETDHSKVSSYASADSIS-------SLSSKKTVVD 102
Query: 123 KPQ---LKEPNVSCFPAFAP--FPLTSSISSSGRPSVPISCGKSTMKLAPVESNCVTTSS 177
+PQ LK N S AP TS S SG S K ++ V+ + + T++
Sbjct: 103 RPQEQGLKHQNSSLQTPLAPAAAAATSPASPSGGSLPQNSLRKQSLGKVVVQPSIIVTAN 162
Query: 178 GP 179
P
Sbjct: 163 PP 164
>ref|XP_471232.1| OSJNBa0095E20.6 [Oryza sativa (japonica cultivar-group)]
gi|38347508|emb|CAE02418.2| OSJNBa0095E20.6 [Oryza
sativa (japonica cultivar-group)]
Length = 354
Score = 79.0 bits (193), Expect = 1e-13
Identities = 72/257 (28%), Positives = 114/257 (44%), Gaps = 8/257 (3%)
Query: 6 RDKQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRP--LSDYP 63
RDK + ++ D N ++ + +V K + + + T +P S
Sbjct: 91 RDKTKEQETQQNVQHDQTNKPEVSSSVAVQHDQSNKPDLSSSVAVQHDQTNKPELSSSVA 150
Query: 64 VNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETALPK 123
V H P S++ V + ++ E A ++ N P ++T K
Sbjct: 151 VQHDQSNKPDLSSSVA--VQHDQTNKPEWPSSVAVQHDQTNKPELPSSVAVQHDQTN--K 206
Query: 124 PQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKSTMKLAPVESNCVTTSSGPTIGN 183
P+L L SS++ SG P S K+ ++ + N + G T+ +
Sbjct: 207 PELPSSVAVQHDQTNKPELPSSVAESGGIVSPKSPEKTNEQIVN-KKNEPPVAPGTTVQD 265
Query: 184 PKGLIDMQ-WEERYQQLQMLLRKLDQSDQVEYVQMLQSLSSVELSRHAVELEKRAIQLSL 242
Q W R+ +LQ L D+S Q Y++ML+SLS+ + S HA++LEKRAI L +
Sbjct: 266 DTHKSSNQYWNARFNRLQTYLESCDRSTQEGYMRMLRSLSAADRSMHAIDLEKRAIHLLV 325
Query: 243 EEAKELQRVAVLNVLGK 259
EE KELQR+ LNVLGK
Sbjct: 326 EEGKELQRMKALNVLGK 342
Score = 50.4 bits (119), Expect = 5e-05
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 3 LPNRDKQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSDY 62
+P DKQ VKK SR+L + S G+S + KDK T+ + GTKR SD
Sbjct: 1 MPASDKQLASTVKKVTSRELPKKGADIVNMSQGTSPLPKDKGTATEPGKTVGTKR--SDA 58
Query: 63 PVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETA-- 120
P SPG H VYVRRK E + K ++ + N R E+ET
Sbjct: 59 P------SSPGY-----HNVYVRRKVENDHSKVSSSQEVKGNG-----RDKTKEQETQQN 102
Query: 121 LPKPQLKEPNVS 132
+ Q +P VS
Sbjct: 103 VQHDQTNKPEVS 114
>ref|XP_585105.1| PREDICTED: similar to trinucleotide repeat containing 9, partial
[Bos taurus]
Length = 527
Score = 42.7 bits (99), Expect = 0.011
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 97 AFENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGR-PSVP 155
A N T++ PP S+ T PQ +P++ + AP PLT + + SV
Sbjct: 319 ASTNLTSSLLLNPP---LSQHGTVSASPQTLQPSLP--RSIAPKPLTMRLPVNPMVTSVT 373
Query: 156 ISCGKSTMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYV 215
I+ + AP+ S+ V ++S + Q +++ QQLQ + Q Q +
Sbjct: 374 IAANMPSNLGAPLISSMVGSASSAQVSPSVQTQQQQQQQQMQQLQQQQLQQQQLQQQQLQ 433
Query: 216 QMLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAKKFKAPADHDECSD 275
Q LQ + +H V+L+++ +Q + + + QR+ + + + +P H +
Sbjct: 434 QQLQQ----QHFQHHVQLQQQQLQQHINQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVTS 489
Query: 276 KL 277
++
Sbjct: 490 QI 491
>gb|AAW25443.1| unknown [Schistosoma japonicum]
Length = 106
Score = 38.5 bits (88), Expect = 0.22
Identities = 23/54 (42%), Positives = 32/54 (58%), Gaps = 1/54 (1%)
Query: 206 LDQSDQVEYVQMLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGK 259
LD+ D +E + SLS+ +L L+ A Q+ LEEAKE+ R LN+LGK
Sbjct: 53 LDKED-LELIHDFGSLSTQQLMDKIKHLQNLAYQVGLEEAKEMTRGKFLNILGK 105
>gb|EAL89601.1| N-terminal acetyltransferase catalytic subunit (NAT1), putative
[Aspergillus fumigatus Af293]
Length = 841
Score = 38.1 bits (87), Expect = 0.28
Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 31/181 (17%)
Query: 27 KIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSDYP--VNHHLQQSPGNSTAN--GHLV 82
K A T+ G+ K +DPD N++ T+ PL D + L+ SP N A G V
Sbjct: 624 KAAAATAKGADGETKKEDPDPLGNKLVQTQDPLKDATKFLTPLLEHSPKNIEAQCLGFEV 683
Query: 83 YVRRKSEAELGKCAA------FENPT-----------NNAFCQP-----PRQLCSEEETA 120
Y+R+K A KC A NPT ++ +P + +E E
Sbjct: 684 YLRQKKYALALKCLAAAHQIDASNPTLHVQLLRFRKALDSLSEPLAPEVAEVVNTEFEKL 743
Query: 121 LPKPQ-LKEPNVSCFPAFAPFPLTSSISSSGR----PSVPISCGKSTMKLAPVESNCVTT 175
LPK Q L+E N S A PL + S R P C K + + + + T
Sbjct: 744 LPKSQNLEEWNNSFLSAHKESPLCTQASLRCRYILQPDSKAQCEKDLVATLDLNNASIET 803
Query: 176 S 176
+
Sbjct: 804 A 804
>ref|NP_775605.1| hypothetical protein LOC243372 [Mus musculus]
gi|26339110|dbj|BAC33226.1| unnamed protein product [Mus
musculus]
Length = 538
Score = 38.1 bits (87), Expect = 0.28
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 110 PRQLCSEEETA----LPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGK 160
PR L S+EET P P+ P + P AP PL+ S+S+ G V + CGK
Sbjct: 57 PRALGSQEETGGTRWAPLPEQDAPLAARVPGTAPGPLSPSLSAGGGHFVCVDCGK 111
>gb|EAA55468.1| hypothetical protein MG09275.4 [Magnaporthe grisea 70-15]
gi|39958647|ref|XP_364430.1| hypothetical protein
MG09275.4 [Magnaporthe grisea 70-15]
Length = 1550
Score = 37.7 bits (86), Expect = 0.37
Identities = 33/135 (24%), Positives = 50/135 (36%), Gaps = 18/135 (13%)
Query: 46 DTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLV------------------YVRRK 87
D+DS R S + L+ YP+ Q G TA G ++ + +
Sbjct: 329 DSDSQRQSPIEVALAPYPITPPADQPNGPPTAVGEMLDPTHTMPKAHEHALDKYDHEAEE 388
Query: 88 SEAELGKCAAFENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSIS 147
EAE + AA E PP + E +P P+ P++S + FPL +
Sbjct: 389 REAEDARKAAEELEIPIHLAMPPTRSPPSEPPRMPPPKPPAPSMSSGDGLSQFPLPPAAP 448
Query: 148 SSGRPSVPISCGKST 162
P PI +T
Sbjct: 449 PRKPPPAPIQIQTNT 463
>gb|AAP94225.1| rtp12.5 [Oncorhynchus mykiss]
Length = 112
Score = 37.4 bits (85), Expect = 0.48
Identities = 19/55 (34%), Positives = 32/55 (57%)
Query: 208 QSDQVEYVQMLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAK 262
+S+ +E ++ L SL++ L L+ A QL LEE++E+ R LN+L + K
Sbjct: 58 ESEDIEMLKKLGSLTTANLMEKVKGLQNLAYQLGLEESREMTRGKFLNILERPKK 112
>dbj|BAC03887.1| unnamed protein product [Homo sapiens]
Length = 258
Score = 37.0 bits (84), Expect = 0.63
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 8/150 (5%)
Query: 33 SVGSSSVLKDKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAEL 92
S+ SSS+L P + S+ S + S P + H SP +S++ S +
Sbjct: 44 SILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSS---PSSSSSSSS 100
Query: 93 GKCAAFENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAP-----FPLTSSIS 147
+ N ++++ P S ++ + S + +P P +SS S
Sbjct: 101 SSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSS 160
Query: 148 SSGRPSVPISCGKSTMKLAPVESNCVTTSS 177
SS S P S S+ +P SN +SS
Sbjct: 161 SSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 190
>emb|CAD43138.1| cell envelope-associated proteinase PrtR [Lactobacillus rhamnosus]
Length = 1480
Score = 37.0 bits (84), Expect = 0.63
Identities = 48/232 (20%), Positives = 77/232 (32%), Gaps = 40/232 (17%)
Query: 8 KQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSDYPVNHH 67
K PT D Q +S +++ KDK +T + TK+ V
Sbjct: 36 KTPTADKTTQPVNQAQTQTATSTASSQATTADAKDKTAETQPTTTTTTKQ------VTAQ 89
Query: 68 LQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETALPKPQLK 127
Q +P +T +++ P++ A QP + +
Sbjct: 90 SQAAPSTATKAQSQASTTNQAQPAAATKVQTGTPSSGANTQPAANTATTKSA-------- 141
Query: 128 EPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKSTMKLAPVESNCVTTSS-GP------T 180
TS+ SS+ S + +T A +S TT+ GP T
Sbjct: 142 ---------------TSTTSSAATQSAAPASNAATTNAAKTQSTAATTTDPGPANQDTLT 186
Query: 181 IGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSLSSVELSRHAVE 232
GN KGL W E YQ M++ +D Q L S+ +++ E
Sbjct: 187 KGNVKGL----WNEGYQGQGMVVAVIDSGVQAHDDLRLSDDSTAAITKEKAE 234
>ref|XP_308229.2| ENSANGP00000020719 [Anopheles gambiae str. PEST]
gi|55245265|gb|EAA04220.2| ENSANGP00000020719 [Anopheles
gambiae str. PEST]
Length = 1405
Score = 36.6 bits (83), Expect = 0.82
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 71 SPGNSTANGHLVYVRRKSEAELGKCAAFE-NPTNNAFCQPPRQLCSEEETALPKPQLKEP 129
SP S + Y+R +S + L A NP + P LC ++ L +P++K
Sbjct: 105 SPVGSPSAAAASYIRSRSVSSLKNLARSSLNPPG----RNPSSLCKLAKSQLTRPKVKPD 160
Query: 130 NVSCFPAFAPFPLTSSISSSGRPSVPISCGKSTMKLAPVESNCVTTSSGPTIGNPK 185
N+S A +P SS SSS + + P + G + V++ S GP +GN +
Sbjct: 161 NISLPAADSP----SSSSSSSQTAGPAASGSKGGFVETVQN--PLPSPGPLLGNTR 210
>emb|CAG04486.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 36.2 bits (82), Expect = 1.1
Identities = 36/145 (24%), Positives = 60/145 (40%), Gaps = 30/145 (20%)
Query: 140 FPLTSSISSSGRPSVPISCGKSTMKLAPVESNCVTTSSGPTIGNPKGLIDMQW------- 192
FP+ S S P+ P+S + + V+ S P + NP G+I W
Sbjct: 421 FPVQQVASESQNPTPPVSPVPADPSSVQQD---VSISDPPQVVNPGGMIQQSWPITPSQV 477
Query: 193 --------EERYQQLQMLLRKLDQSDQVEYVQMLQSLSSVELSRHAVELEKRAIQLSLEE 244
E+ +Q++ L+RKL+Q ++ VE + +E+EKRA +
Sbjct: 478 PEEKDRRLHEKERQIEELMRKLEQEQKL-----------VEALKMQLEVEKRASDSVSPK 526
Query: 245 AKELQRVA-VLNVLGKSAKKFKAPA 268
+ ++ V VL S K +A A
Sbjct: 527 LSPVPAISTVPAVLNTSILKMEAAA 551
>pir||S50832 atrophin-1 - human
Length = 1184
Score = 35.8 bits (81), Expect = 1.4
Identities = 28/109 (25%), Positives = 42/109 (37%), Gaps = 2/109 (1%)
Query: 2 DLPNRDKQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSD 61
DL + D + D + RD+ DN+ + + SV + D D+ S G RP
Sbjct: 104 DLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSV--ENDSDSSSGLSQGPARPYHP 161
Query: 62 YPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPP 110
P+ Q P ++ + S G A E PT+ F PP
Sbjct: 162 PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
>ref|NP_001931.2| atrophin-1 [Homo sapiens] gi|55750053|ref|NP_001007027.1|
atrophin-1 [Homo sapiens] gi|1732417|gb|AAB51321.1|
DRPLA [Homo sapiens]
Length = 1190
Score = 35.8 bits (81), Expect = 1.4
Identities = 28/109 (25%), Positives = 42/109 (37%), Gaps = 2/109 (1%)
Query: 2 DLPNRDKQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSD 61
DL + D + D + RD+ DN+ + + SV + D D+ S G RP
Sbjct: 104 DLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSV--ENDSDSSSGLSQGPARPYHP 161
Query: 62 YPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPP 110
P+ Q P ++ + S G A E PT+ F PP
Sbjct: 162 PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
>gb|AAG51929.1| unknown protein; 17658-16304 [Arabidopsis thaliana]
gi|25352558|pir||G96780 unknown protein F9E10.7
[imported] - Arabidopsis thaliana
Length = 333
Score = 35.8 bits (81), Expect = 1.4
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 99 ENPTNNAFCQP-PRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPIS 157
++P ++AF P P S ++ P P EPN + F PF I SS PS+ IS
Sbjct: 110 QSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSS-LPSLRIS 168
Query: 158 CGKSTMKLAPVESNCVTTS--SGPTIGNPKGLIDMQWEERYQQLQMLLRK 205
++C T S PT NPK L WE +Q + ++
Sbjct: 169 ------------NSCPVTPPVSSPTSKNPKPL--PNWESIAKQSMAIAKQ 204
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.310 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,988,408
Number of Sequences: 2540612
Number of extensions: 20026563
Number of successful extensions: 48584
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 48495
Number of HSP's gapped (non-prelim): 136
length of query: 281
length of database: 863,360,394
effective HSP length: 126
effective length of query: 155
effective length of database: 543,243,282
effective search space: 84202708710
effective search space used: 84202708710
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0117b.7