BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0115.1
(204 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY33663.1| unknown [Brassica juncea] 166 4e-40
ref|NP_671823.1| expressed protein [Arabidopsis thaliana] 164 2e-39
ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-gr... 156 4e-37
gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cult... 153 3e-36
gb|AAP54021.1| contains similarity to ribosomal protein [Oryza s... 152 7e-36
ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-gr... 147 1e-34
ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cu... 147 2e-34
gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cult... 147 2e-34
dbj|BAD36605.1| ribosomal protein-like [Oryza sativa (japonica c... 141 1e-32
gi|27575890 TPA: putative transposase [Oryza sativa (japonica cu... 140 2e-32
gb|AAL79730.1| putative ribosomal protein [Oryza sativa] 139 4e-32
gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY su... 138 8e-32
gi|27575887 TPA: putative transposase [Oryza sativa (japonica cu... 138 8e-32
gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY su... 138 1e-31
gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY su... 138 1e-31
gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY su... 136 3e-31
ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cu... 134 2e-30
emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultiva... 134 2e-30
ref|XP_471573.1| OSJNBb0032D24.14 [Oryza sativa (japonica cultiv... 132 6e-30
gb|AAM45005.1| unknown protein [Arabidopsis thaliana] gi|1529288... 129 4e-29
>gb|AAY33663.1| unknown [Brassica juncea]
Length = 136
Score = 166 bits (420), Expect = 4e-40
Identities = 81/122 (66%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
Query: 29 MDPSECPFDLAAYIQNSQIEEAYVLNRFRERRRKIRED-TAPRSRKYLGRDHTAANQRLI 87
MDP E FD+ AY + S+I+E Y+LN F ERR+KI +D ++ + R+Y RDH AANQRLI
Sbjct: 15 MDPLEFDFDIEAYKRQSEIKERYILNHFSERRQKIEQDYSSSKKRRYFKRDHAAANQRLI 74
Query: 88 GDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTT 147
DYF+N+PTYDDAMFRRR+RM+KH+FL IV +LS SD+YFTQR DAANK+GISPLAK TT
Sbjct: 75 DDYFSNQPTYDDAMFRRRFRMRKHVFLWIVGNLSISDDYFTQRFDAANKEGISPLAKYTT 134
Query: 148 AM 149
AM
Sbjct: 135 AM 136
>ref|NP_671823.1| expressed protein [Arabidopsis thaliana]
Length = 270
Score = 164 bits (414), Expect = 2e-39
Identities = 90/172 (52%), Positives = 102/172 (58%), Gaps = 49/172 (28%)
Query: 29 MDPSECPFDLAAYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDHTAANQRLIG 88
MDPSE PFD+ AY + S+IEE Y++NRFRERR KI ED P
Sbjct: 1 MDPSEYPFDIKAYKRQSEIEEMYIINRFRERRNKIGEDYPPH------------------ 42
Query: 89 DYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTTA 148
LS+SDNYFTQR DAA K+GISPL K TT
Sbjct: 43 -------------------------------LSNSDNYFTQRYDAAKKEGISPLPKYTTT 71
Query: 149 MRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
MRM AYGVAADAVDEY KIGGTT LECLRRFCKGII+LYE +YLRAP + ++
Sbjct: 72 MRMFAYGVAADAVDEYSKIGGTTTLECLRRFCKGIIKLYETEYLRAPTQDDL 123
>ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-group)]
Length = 401
Score = 156 bits (394), Expect = 4e-37
Identities = 80/184 (43%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
Query: 25 ISQKMDPSECPFDLAAYIQNSQIEEAYVLNRFRER-----RRKIREDTAPRS---RKYLG 76
+S + D S P ++ Y + + E VLN F R + ++ T+ R+ RKY+
Sbjct: 1 MSDEFDNSIDPAEI--YTTDMFMAEHSVLNSFAGRIDKRIKARLEGGTSRRTSGPRKYIN 58
Query: 77 RDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANK 136
R+H A+ +L DYFA +P Y A FRRR+RM++H+FL IVD+L +YFT RVD +
Sbjct: 59 RNHEGAHDQLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRVDCTGR 118
Query: 137 QGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPV 196
G SPL KCT A+RMLAYG AADA+DEY+K+ +TALECL F +G+++++ +YLR P
Sbjct: 119 LGHSPLQKCTAAIRMLAYGTAADALDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPT 178
Query: 197 RPEI 200
++
Sbjct: 179 AEDL 182
>gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37536886|ref|NP_922745.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|12597879|gb|AAG60187.1| hypothetical protein [Oryza
sativa]
Length = 513
Score = 153 bits (386), Expect = 3e-36
Identities = 82/184 (44%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
Query: 25 ISQKMDPSECPFDLAAYIQNSQIEEAYVLNRFR---ERRRKIRED--TAPRS---RKYLG 76
+S + D S P ++ Y + + E VLN F +RR K R + T+ R+ RKY+
Sbjct: 1 MSDEFDNSIDPAEI--YTTDMFMAEHSVLNSFAGRIDRRIKARLEGGTSRRTSGPRKYIN 58
Query: 77 RDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANK 136
R+H A+ +L DYFA +P Y A FRRR+RM++H+FL IVD+L +YFT RVD
Sbjct: 59 RNHEGAHDQLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRVDCTGC 118
Query: 137 QGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPV 196
G SPL KCT A+RMLAYG AAD +DEY+K+ +TALECL F +G+++++ +YLR P
Sbjct: 119 LGHSPLQKCTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPT 178
Query: 197 RPEI 200
++
Sbjct: 179 AEDL 182
>gb|AAP54021.1| contains similarity to ribosomal protein [Oryza sativa (japonica
cultivar-group)] gi|37534864|ref|NP_921734.1| contains
similarity to ribosomal protein [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 152 bits (383), Expect = 7e-36
Identities = 76/180 (42%), Positives = 113/180 (62%), Gaps = 14/180 (7%)
Query: 29 MDPSECPFDLAAYIQNSQIEEAYVLNRFRER-----RRKIREDTAPRS---RKYLGRDHT 80
+DP+E Y + + E VLN F R + ++ T+ R+ RKY+ R+H
Sbjct: 9 IDPAE------VYTTDMFMAEHSVLNSFAGRIDKRIKARLEGGTSRRTSGPRKYINRNHE 62
Query: 81 AANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGIS 140
A+ +L DYFA +P Y A FRRR+RM++H+FL IVD+L +YFT R++ + G S
Sbjct: 63 GAHDQLFADYFAKDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRINCTGRLGHS 122
Query: 141 PLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
PL KCT A+RMLAYG AAD +DEY+K+ +TALECL F +G+++++ +YLR P ++
Sbjct: 123 PLQKCTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAEDL 182
>ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-group)]
Length = 408
Score = 147 bits (372), Expect = 1e-34
Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 26 SQKMDPSECPFDLAAYIQNSQIEEAYVLNRFRERRRKIREDTAPR---SRKYLGRDHTAA 82
S ++DPS+ + YI + +++ + + K+R R +RK + DHT A
Sbjct: 6 SGELDPSKI---IDQYIVEQNLIDSFARRVMEKIKTKLRIGKIRRKSVTRKTIKTDHTVA 62
Query: 83 NQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPL 142
+ LI DYF+ +P Y ++MFR R+RM + LFLRIV L YFT +VD + +QG+SPL
Sbjct: 63 HHCLIADYFSEDPLYPESMFRTRFRMGRPLFLRIVSALGRWSPYFTLKVDCSGRQGLSPL 122
Query: 143 AKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
KCTT MRMLAYG AD++DEY+KIG +T+L+CL F +G+I+++ +YLR P ++
Sbjct: 123 QKCTTTMRMLAYGSPADSLDEYLKIGKSTSLQCLDMFARGVIEVFGSEYLRRPTYEDV 180
>ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|29824487|gb|AAP04202.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 626
Score = 147 bits (371), Expect = 2e-34
Identities = 77/170 (45%), Positives = 107/170 (62%), Gaps = 10/170 (5%)
Query: 41 YIQNSQIEEAYVLNRFRER-----RRKIREDTAPR-----SRKYLGRDHTAANQRLIGDY 90
Y + I EA L+ + E+ + I + R +R+Y+ R+ A+N L+ +Y
Sbjct: 200 YSMDDFIAEATFLDEYSEQIILRLKENITSEPPRRLHQSGTRRYIPRNREASNADLVANY 259
Query: 91 FANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTTAMR 150
F+ P Y D MFRRR+RM+K LFLRIV LS YFT R+DA + G SPL KCT A+R
Sbjct: 260 FSESPIYTDKMFRRRFRMRKPLFLRIVSALSEWSPYFTNRLDATGRAGHSPLQKCTAAIR 319
Query: 151 MLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
MLAYG AD +DE +KIG TALECL +F +G+I+++ ++YLRAP E+
Sbjct: 320 MLAYGTPADQLDEVLKIGPNTALECLGKFAEGVIEIFRKEYLRAPRSDEV 369
>gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|55167955|gb|AAV43824.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 444
Score = 147 bits (370), Expect = 2e-34
Identities = 79/178 (44%), Positives = 107/178 (59%), Gaps = 6/178 (3%)
Query: 26 SQKMDPSECPFDLAAYIQNSQIEEAY---VLNRFRERRRKIREDTAPRSRKYLGRDHTAA 82
S +DPS+ L YI + ++ ++ + + R R + K + RDH A
Sbjct: 12 SDDLDPSKV---LDKYISEQNVLGSFASRIIEKMKGRFGAGRLKRQGGTIKTIRRDHVDA 68
Query: 83 NQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPL 142
+ RL+ DYFA P Y + MFR R+RM K LFLRIV+ LS YFTQR D + +SPL
Sbjct: 69 HSRLVADYFAEHPLYPERMFRTRFRMHKPLFLRIVEALSQWSPYFTQRGDCSGHTSLSPL 128
Query: 143 AKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
KCT A+RMLAYG ADA+DEY+KIG +TALECL F +G+I ++ YLR P R ++
Sbjct: 129 QKCTAALRMLAYGTPADALDEYLKIGKSTALECLEMFSRGVIVVFGGTYLRRPTREDV 186
>dbj|BAD36605.1| ribosomal protein-like [Oryza sativa (japonica cultivar-group)]
Length = 510
Score = 141 bits (356), Expect = 1e-32
Identities = 72/184 (39%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 15 ISQISSNLLQISQKMDPSECPFDLAAYIQNSQIEEAYVLNRFRERRRKIREDTAP---RS 71
+S+ S + ++DP+E + + Y+Q Q A + ++ R
Sbjct: 1 MSESSEEISSSDNEVDPTEI-YTMEDYLQRQQAWNAAAAQLASHLLHTLGPSSSQQPRRR 59
Query: 72 RKYLGRDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRV 131
R+Y RD + R++ DYF P Y D FRRR+RM++ LFLRI++ L YFTQRV
Sbjct: 60 RRYCRRDRIGGHARIMADYFCENPVYSDRDFRRRFRMRRPLFLRILNALGEWSEYFTQRV 119
Query: 132 DAANKQGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQY 191
D + G+SP+ KCT RMLAY +AD VDEY +IGG+TALE L+ FC+G+I+++ +Y
Sbjct: 120 DGIGQLGLSPIQKCTAVNRMLAYAASADQVDEYCRIGGSTALESLKLFCQGVIEIFGPEY 179
Query: 192 LRAP 195
L P
Sbjct: 180 LHQP 183
>gi|27575890 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
gi|22830897|dbj|BAC15771.1| B [Oryza sativa (japonica
cultivar-group)]
Length = 455
Score = 140 bits (353), Expect = 2e-32
Identities = 66/124 (53%), Positives = 89/124 (71%)
Query: 72 RKYLGRDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRV 131
RK++ R A+Q L+ DYF+ P Y +FRRR+RM + LFLRIVD L +YFTQRV
Sbjct: 57 RKHIKRPREEAHQNLVNDYFSENPLYPSNIFRRRFRMYRPLFLRIVDALGQWSDYFTQRV 116
Query: 132 DAANKQGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQY 191
DAA +QG+SPL KCT A+R LA G AD +DEY+KIG TTA++ ++ F KGI +++ ++Y
Sbjct: 117 DAAGRQGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMDAMKNFVKGIREVFGERY 176
Query: 192 LRAP 195
LR P
Sbjct: 177 LRRP 180
>gb|AAL79730.1| putative ribosomal protein [Oryza sativa]
Length = 915
Score = 139 bits (351), Expect = 4e-32
Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 25 ISQKMDPSECPFDLAAYIQNSQIEEAYVLNRFRERRRKIREDTA--PRSR-------KYL 75
+ +++DP+E + L ++ +I E++ + + KI ++ PR R +Y+
Sbjct: 473 VLEEIDPAEV-YTLEDFLAEDEIMESFRRKIGDKLKAKIEGSSSGPPRRRQRQSGPRRYI 531
Query: 76 GRDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAAN 135
R ++ L+ +YF+ P Y D FRRR+RM K LFLRIV+ LS+ D +FTQRVDA
Sbjct: 532 PRPREKGHEDLVANYFSANPIYTDEQFRRRFRMNKPLFLRIVNALSNWDQFFTQRVDATG 591
Query: 136 KQGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAP 195
+ SPL KCT A+RML YG ADA+DE +KI +T+LECL +F GII+ + +YLR P
Sbjct: 592 RDSHSPLQKCTAAIRMLGYGTPADALDEVLKIAASTSLECLGKFAVGIIECFGSEYLRPP 651
Query: 196 VRPEI 200
E+
Sbjct: 652 TSDEL 656
>gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
gi|50252817|dbj|BAD29050.1| ribosomal protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 447
Score = 138 bits (348), Expect = 8e-32
Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
Query: 27 QKMDPSECPFDLA-------AYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDH 79
Q D S+ P +L I + E V+ E + D RK++ R
Sbjct: 4 QNTDGSQVPVNLLDEFLAEDEIIDDLLTEATVVVQSTIEGLQNEASDHRHHPRKHIKRPR 63
Query: 80 TAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGI 139
A+Q+L+ DYF+ P Y +FRRR+RM + LFLRIV+ L YFTQRVDA N++G+
Sbjct: 64 EEAHQQLVNDYFSENPLYPSKIFRRRFRMSRPLFLRIVEALGQWSVYFTQRVDAVNRKGL 123
Query: 140 SPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAP 195
SPL KCT A+R LA G AD +DEY+KIG TTA+E ++ F KG+ ++ ++YLR P
Sbjct: 124 SPLQKCTAAIRQLATGSGADELDEYLKIGETTAMEAMKNFVKGLQDVFGERYLRRP 179
>gi|27575887 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
Length = 482
Score = 138 bits (348), Expect = 8e-32
Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
Query: 27 QKMDPSECPFDLA-------AYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDH 79
Q D S+ P +L I + E V+ E + D RK++ R
Sbjct: 39 QNTDGSQVPVNLLDEFLAEDEIIDDLLTEATVVVQSTIEGLQNEASDHRHHPRKHIKRPR 98
Query: 80 TAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGI 139
A+Q+L+ DYF+ P Y +FRRR+RM + LFLRIV+ L YFTQRVDA N++G+
Sbjct: 99 EEAHQQLVNDYFSENPLYPSKIFRRRFRMSRPLFLRIVEALGQWSVYFTQRVDAVNRKGL 158
Query: 140 SPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAP 195
SPL KCT A+R LA G AD +DEY+KIG TTA+E ++ F KG+ ++ ++YLR P
Sbjct: 159 SPLQKCTAAIRQLATGSGADELDEYLKIGETTAMEAMKNFVKGLQDVFGERYLRRP 214
>gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 403
Score = 138 bits (347), Expect = 1e-31
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 37 DLAAYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDHTAANQRLIGDYFANEPT 96
DLA ++ E L R R+ R+Y+ R + + L+ DYF P
Sbjct: 39 DLADHVVAELKSEVEALQDMRPTRQS-------GPRRYVDRPYEESKHGLLKDYFVQNPV 91
Query: 97 YDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTTAMRMLAYGV 156
Y+D FRRR+RM+KHLFLRIV+ L D YFT R+DA N+ G+SPL KCT+A+ L G
Sbjct: 92 YNDTTFRRRFRMKKHLFLRIVEALGQWDKYFTLRMDALNRPGLSPLKKCTSAICQLGNGS 151
Query: 157 AADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
AD +DEY+ IG +T +ECL+ F KG+I+++ +YLR P+ ++
Sbjct: 152 PADQLDEYLNIGDSTTVECLKMFVKGVIEVFGAEYLRRPMVQDV 195
>gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 408
Score = 138 bits (347), Expect = 1e-31
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 37 DLAAYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDHTAANQRLIGDYFANEPT 96
DLA ++ E L R R+ R+Y+ R + + L+ DYF P
Sbjct: 39 DLADHVVAELKSEVEALQDMRPTRQS-------GPRRYVDRPYEESKHGLLKDYFVQNPV 91
Query: 97 YDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTTAMRMLAYGV 156
Y+D FRRR+RM+KHLFLRIV+ L D YFT R+DA N+ G+SPL KCT+A+ L G
Sbjct: 92 YNDTTFRRRFRMKKHLFLRIVEALGQWDKYFTLRMDALNRPGLSPLKKCTSAICQLGNGS 151
Query: 157 AADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEI 200
AD +DEY+ IG +T +ECL+ F KG+I+++ +YLR P+ ++
Sbjct: 152 PADQLDEYLNIGDSTTVECLKMFVKGVIEVFGAEYLRRPMVQDV 195
>gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 454
Score = 136 bits (343), Expect = 3e-31
Identities = 77/188 (40%), Positives = 110/188 (57%), Gaps = 7/188 (3%)
Query: 19 SSNLLQISQKMDPSECPFDLAAYIQNSQIEEAYVLNRFRERRRKIREDTA----PRS--R 72
SSN + S + P+ + + +I I + ++ + KI A PRS R
Sbjct: 10 SSNDSEDSNIIHPASI-YSMEEFIAEQSIVDNFLQRIIVKIEAKIEAQKASTSHPRSGER 68
Query: 73 KYLGRDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVD 132
KY+ R+ ++RL+ DYF+ +P Y D FR RYRM++ LFLRIV L YFT R D
Sbjct: 69 KYVKRNREEGHRRLVEDYFSKDPIYSDKQFRARYRMRRPLFLRIVHALGEWSPYFTSRRD 128
Query: 133 AANKQGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYL 192
A N+QG+SPL KCT A+R LA G DA+DEY+ G +TALECL F +G+I + ++YL
Sbjct: 129 AINRQGLSPLQKCTIAIRALACGTLGDAIDEYVDTGISTALECLDWFVEGVIDNFGEEYL 188
Query: 193 RAPVRPEI 200
R+P ++
Sbjct: 189 RSPTSEDM 196
>ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|48475076|gb|AAT44145.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 443
Score = 134 bits (337), Expect = 2e-30
Identities = 62/129 (48%), Positives = 87/129 (67%)
Query: 72 RKYLGRDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRV 131
R+Y+ R+ + L+ +YF+ P Y D MFRRR+RM++ LFLRIV +LS YFTQRV
Sbjct: 59 RRYIPRNRERGHDDLVANYFSANPIYTDEMFRRRFRMRRPLFLRIVHELSEWSPYFTQRV 118
Query: 132 DAANKQGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQY 191
DA + +SPL KC A+RML YG AAD +DE ++I +T LECL +F +G+I+ + +Y
Sbjct: 119 DATGRNSLSPLQKCIAAIRMLGYGTAADQLDEVLRIAASTCLECLGKFAEGVIEKFGDEY 178
Query: 192 LRAPVRPEI 200
LR P E+
Sbjct: 179 LRLPRADEL 187
>emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultivar-group)]
gi|50927987|ref|XP_473521.1| OSJNBa0017B10.12 [Oryza
sativa (japonica cultivar-group)]
Length = 454
Score = 134 bits (336), Expect = 2e-30
Identities = 76/167 (45%), Positives = 97/167 (57%), Gaps = 6/167 (3%)
Query: 37 DLAAYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDHTAANQRLIGDYFANEPT 96
D ++YI+ +QIEE +++R + RKY+ R+ A RL YF P
Sbjct: 38 DTSSYIE-TQIEEDISYQIKKQQR-----GPPTQQRKYIRRERQDAEDRLKAYYFLENPM 91
Query: 97 YDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTTAMRMLAYGV 156
Y+D FR RYRM+KHLFL IV LS F QR DA K G SPL KCT A+RMLAYG
Sbjct: 92 YNDTQFRWRYRMKKHLFLHIVQTLSHWSPVFQQRKDAFGKVGFSPLLKCTAALRMLAYGT 151
Query: 157 AADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEILSL 203
+AD +DE ++I TT +E L FCKGII + +YLR P +I L
Sbjct: 152 SADILDENLQIAETTVIESLVNFCKGIIDCFGPKYLRRPTAEDIQRL 198
>ref|XP_471573.1| OSJNBb0032D24.14 [Oryza sativa (japonica cultivar-group)]
gi|38344363|emb|CAE04084.2| OSJNBb0032D24.14 [Oryza
sativa (japonica cultivar-group)]
Length = 450
Score = 132 bits (332), Expect = 6e-30
Identities = 65/133 (48%), Positives = 84/133 (62%)
Query: 71 SRKYLGRDHTAANQRLIGDYFANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQR 130
+R+Y+ RDH + RL YF+ P Y D FRRR+RM++HLFLRIV L YF R
Sbjct: 64 TRRYISRDHEDDHNRLFAKYFSESPLYTDDQFRRRFRMRRHLFLRIVQALGVWSPYFRLR 123
Query: 131 VDAANKQGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQ 190
DA K G+SPL KCT AMRMLAYG AD +DE + +TA+EC+ F +G+ L+ +Q
Sbjct: 124 RDAFGKVGLSPLQKCTAAMRMLAYGTPADLMDETFGVAESTAMECMINFVQGVRHLFGEQ 183
Query: 191 YLRAPVRPEILSL 203
YLR P +I L
Sbjct: 184 YLRRPTVEDIQRL 196
>gb|AAM45005.1| unknown protein [Arabidopsis thaliana] gi|15292885|gb|AAK92813.1|
unknown protein [Arabidopsis thaliana]
gi|9294258|dbj|BAB02160.1| unnamed protein product
[Arabidopsis thaliana] gi|18400709|ref|NP_566505.1|
expressed protein [Arabidopsis thaliana]
Length = 415
Score = 129 bits (325), Expect = 4e-29
Identities = 73/172 (42%), Positives = 95/172 (54%)
Query: 32 SECPFDLAAYIQNSQIEEAYVLNRFRERRRKIREDTAPRSRKYLGRDHTAANQRLIGDYF 91
S PF+ A Q+ + N F E R R Y R + L DYF
Sbjct: 5 SRTPFNDAMEESFDQLLDQQFENVFVELSNSEEVAKKNRKRAYFDRKREEGHVLLWNDYF 64
Query: 92 ANEPTYDDAMFRRRYRMQKHLFLRIVDDLSSSDNYFTQRVDAANKQGISPLAKCTTAMRM 151
++ + FRRR+RM+K LFLRIVD LSS +F R DA + G SP+ KCT A+R+
Sbjct: 65 SDNAIFPLQTFRRRFRMKKPLFLRIVDRLSSELMFFQHRRDATGRFGHSPIQKCTAAIRL 124
Query: 152 LAYGVAADAVDEYIKIGGTTALECLRRFCKGIIQLYEQQYLRAPVRPEILSL 203
LAYG A+DAVDEY+++G TTA+ CL F KGII + +YLRAP + L
Sbjct: 125 LAYGYASDAVDEYLRMGETTAMSCLENFTKGIISFFGDEYLRAPTATNLRRL 176
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.137 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,466,923
Number of Sequences: 2540612
Number of extensions: 11752530
Number of successful extensions: 36217
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 36146
Number of HSP's gapped (non-prelim): 79
length of query: 204
length of database: 863,360,394
effective HSP length: 122
effective length of query: 82
effective length of database: 553,405,730
effective search space: 45379269860
effective search space used: 45379269860
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0115.1