BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0110a.10
(1408 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 388 e-106
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 379 e-103
ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana] 379 e-103
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 377 e-102
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 371 e-100
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 370 e-100
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 370 e-100
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 369 e-100
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 369 e-100
gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353... 365 6e-99
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 359 4e-97
ref|NP_914485.1| P0489A01.23 [Oryza sativa (japonica cultivar-gr... 358 5e-97
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa... 358 9e-97
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 355 5e-96
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 354 1e-95
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 351 1e-94
ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica c... 351 1e-94
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 348 6e-94
dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cu... 348 6e-94
gb|AAD25621.1| Hypothetical protein [Arabidopsis thaliana] gi|... 346 4e-93
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 388 bits (996), Expect = e-106
Identities = 191/407 (46%), Positives = 260/407 (62%), Gaps = 17/407 (4%)
Query: 502 IEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHGPCG 561
IEFQKRGLPHAHILL++ KL++ D +I AE+PD K P L+ V + M+HGPCG
Sbjct: 57 IEFQKRGLPHAHILLFMHPTSKLSTAEDTDKIITAEIPDKKKKPGLYAVVKDCMIHGPCG 116
Query: 562 LSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFVVPY 621
+ SPCM+NG+C K+FPK Y+D T D+DG+PVYRRR+TG+ + G DN +V+PY
Sbjct: 117 VGHPNSPCMENGKCKKYFPKSYSDTTKVDNDGFPVYRRRDTGIYVEKNGFQCDNRYVIPY 176
Query: 622 NPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVEDDEIKQY 681
N K+ ++YQAHIN+E CN+S SIKYLFKY++KG DRVT+++ K E DE+K Y
Sbjct: 177 NEKVSLRYQAHINVELCNQSGSIKYLFKYVHKGHDRVTVTVEPNDQDTAKK-EKDEVKDY 235
Query: 682 FDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVLRRNIVKNS 741
FDCRY+S CEA+WRIF++ IH++ PV KL +H KQ V +K E E V+ R + +
Sbjct: 236 FDCRYVSACEAMWRIFKFPIHYRTTPVVKLFFHEEGKQPVYYKPGETTESVMDRLSSEAT 295
Query: 742 MFLAWMDANCK----------------YVHGRQLTYVEFPELFVYDPKSKSWHPRKQGES 785
FLAW N K +L + E P F ++ K K + R++G +
Sbjct: 296 QFLAWFQLNKKPPSRTIRANAKKLPKAAPDPTKLLFEEIPNHFTWNSKEKKFMIRERGFA 355
Query: 786 IGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREF 845
IGR++FVP + YYLR+LLN++RG T Y+DL++V VH +FR A ALGLL DD+E+
Sbjct: 356 IGRINFVPRTIEDAYYLRILLNIKRGVTSYKDLKTVKGVVHKSFRDAVFALGLLDDDKEY 415
Query: 846 IDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGI 892
I+GI D Y R LFV LL S+ P VW+ETW +L++ I
Sbjct: 416 INGIKDAKFWCSAKYVRRLFVIMLLSESLTKPEMVWDETWRILSEDI 462
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 379 bits (974), Expect = e-103
Identities = 189/412 (45%), Positives = 262/412 (62%), Gaps = 18/412 (4%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
M+T+EFQKRGLPHAHILL++ A+ KL + ID +I AE+PD P L+E + N M+HG
Sbjct: 778 MHTVEFQKRGLPHAHILLFMDAKSKLPTADDIDKIISAEIPDKDKEPELYEVIKNSMIHG 837
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + SPCM G+C+K +PKK+ D+T DGYP+YRRR T + G DNG+V
Sbjct: 838 PCGAANMNSPCMVEGKCSKQYPKKHQDITKVGKDGYPIYRRRMTEDYIEKGGFKCDNGYV 897
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRV------------TLSMSSGR 666
VPYN KL ++YQAHIN+E+CN+S SIKYLFKYINKG DRV T + +SG
Sbjct: 898 VPYNKKLSLRYQAHINVEWCNQSGSIKYLFKYINKGADRVVFIVEPVNQDKTTENATSGE 957
Query: 667 TTQDKPVEDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKEN 726
+ DEIK +FDCRY+S EAVWRI+++ + + VQ+L++H KQ V K +
Sbjct: 958 PPNSTEKKKDEIKDWFDCRYVSASEAVWRIYKFPLQDRSTAVQRLSFHDEGKQPVYAKPD 1017
Query: 727 EAIEDVLRRNIVKNSMFLAWMDANCKYVHG------RQLTYVEFPELFVYDPKSKSWHPR 780
IEDVL R ++SMF+AW+ N G R+L Y + P F +D K+K W R
Sbjct: 1018 ADIEDVLERISNEDSMFMAWLTLNKNNDVGKNGKRARELLYSQIPAYFTWDGKNKQWVKR 1077
Query: 781 KQGESIGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLK 840
+G S+GR+++V YYLR+LLN+ +G Y+D+++ N V+ +F+ AC A G+L
Sbjct: 1078 IRGFSLGRINYVCRKMEVEYYLRVLLNIVKGPMSYDDIKTFNGVVYPSFKEACFARGILD 1137
Query: 841 DDREFIDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGI 892
DD+ +IDG+ + + G Y R F LL +S+ P HVW+ETWH+LA+ I
Sbjct: 1138 DDQVYIDGLHEASQFCFGDYLRNFFAMLLLSDSLARPEHVWSETWHLLAEDI 1189
Score = 132 bits (331), Expect = 1e-28
Identities = 62/116 (53%), Positives = 80/116 (68%)
Query: 4 KAQKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTS 63
K Q++ SP F++CC KG + LP L D P L++NLL D SR+F +NIR YN +FA TS
Sbjct: 340 KKQQNKSPTFTLCCGKGNVKLPLLKDSPALINNLLTGDDALSRNFRENIRIYNMIFAMTS 399
Query: 64 IGGKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNR 119
+GG+VD + G+GP F + G NYH IGSL P GD K++QLYI DT+NEV NR
Sbjct: 400 LGGRVDNSMPKGKGPNMFRLQGGNYHLIGSLKPNPGDYAKYSQLYIVDTENEVDNR 455
>ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana]
Length = 1238
Score = 379 bits (972), Expect = e-103
Identities = 184/420 (43%), Positives = 272/420 (63%), Gaps = 18/420 (4%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
MYTIEFQKRGLPHAHIL+WL ++ KL ID I AE+PD P LFE + MVHG
Sbjct: 363 MYTIEFQKRGLPHAHILIWLDSKCKLTRAEHIDKAISAEIPDKLKDPELFEVIKEMMVHG 422
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG+ + PCM+NG+C+KF+PK + T D +G+P+YRRR ++ DN +V
Sbjct: 423 PCGVVNPKCPCMENGKCSKFYPKDHVPKTIIDKEGFPIYRRRRIDDFVQKKDFKCDNRYV 482
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDK------- 671
+PYN L ++Y+AHIN+E+CN+S S+KY+FKYI+KG DRVT+ + S +++K
Sbjct: 483 IPYNRSLSLRYRAHINVEWCNQSGSVKYIFKYIHKGPDRVTVVVGSSLNSKNKEKGKQKV 542
Query: 672 --------PVEDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLF 723
P + +E++ +F+CRY+S CEA WRI +Y IH++ V KL++HLP +Q + F
Sbjct: 543 NADTDGSEPKKKNEVEDFFNCRYVSACEAAWRILKYPIHYRSTSVMKLSFHLPGEQYIYF 602
Query: 724 KENEAIEDVLRRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQG 783
K +E +E VL + + SMFL+W + N R+LTY P F YDPK K ++ RK+G
Sbjct: 603 KGDEEVETVLNKADLDGSMFLSWFELNKVSQIARKLTYPNIPTRFTYDPKEKKFNLRKKG 662
Query: 784 ESIGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDR 843
+IGR+++VP + YYLR+LLNV G +E+L++VN ++ ++ ACEALGLL +D+
Sbjct: 663 FAIGRINYVPRDIEDGYYLRILLNVVPGPRSFEELKTVNGVLYKEWKDACEALGLLDNDQ 722
Query: 844 EFIDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNNR 903
E+ID + + + G Y R LFV L +++ +P +VW TW L++ I + ++K+ NR
Sbjct: 723 EYIDDLKRTSFWSSGWYLRQLFVIML--DALISPENVWAATWQHLSEDIQNE-KKKYFNR 779
Score = 43.1 bits (100), Expect = 0.067
Identities = 23/35 (65%), Positives = 27/35 (76%), Gaps = 2/35 (5%)
Query: 86 QNYHRIGSLVPTEGDNP-KFAQLYIYDTKNEVQNR 119
+NYHRIGSL ++ D P KF QLYI DT+NEV NR
Sbjct: 10 ENYHRIGSL-RSDNDIPLKFMQLYIVDTENEVDNR 43
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 377 bits (969), Expect = e-102
Identities = 189/427 (44%), Positives = 269/427 (62%), Gaps = 18/427 (4%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
MYT+EFQKRGLPHAHILL+++A KL + ID +I AE+P+ P L+E + N M+HG
Sbjct: 446 MYTVEFQKRGLPHAHILLFMAANSKLPTADDIDKIISAEIPNKDKEPELYEVIKNSMMHG 505
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + SPCM +G+C+K +PKK+ ++T +DGYP+YRRR T + GV DN +V
Sbjct: 506 PCGSANTSSPCMVDGQCSKLYPKKHQEITKVGADGYPIYRRRLTDDYIEKGGVKCDNRYV 565
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTL------SMSSGRTTQDKP 672
VPYN KL ++YQAHIN+E+CN++ SIKYLFKYINKG DRV +S TT
Sbjct: 566 VPYNKKLSLRYQAHINVEWCNQNGSIKYLFKYINKGPDRVVFIVEPIKEATSSDTTAPVV 625
Query: 673 VED------DEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKEN 726
D DEIK +FDCRY+S EA+WRIF++ I H+ PVQKL++H KQ F
Sbjct: 626 ESDTTEKKKDEIKDWFDCRYVSASEAIWRIFKFPIQHRSTPVQKLSFHDKGKQPAYFDAK 685
Query: 727 EAIEDVLRRNIVKNSMFLAWMDANCKYVHG------RQLTYVEFPELFVYDPKSKSWHPR 780
+ DVL R ++S FLAW+ N K G R Y E P F +D ++K + R
Sbjct: 686 AKMADVLERVSNEDSQFLAWLTLNRKNAVGKNGKRARDCLYAEIPAYFTWDGENKQFKKR 745
Query: 781 KQGESIGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLK 840
+G S+GR+++V + YYLR+LLN+ RG Y+D+++VN V+ +++ AC A G+L
Sbjct: 746 TRGFSLGRINYVSRKMEDEYYLRVLLNIVRGPQSYDDIKTVNGVVYPSYKLACFARGILD 805
Query: 841 DDREFIDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKH 900
DD+ +I+G+++ + G Y R F LL +S+ P HVW+ETWH+L++ I + +
Sbjct: 806 DDQVYINGLIEASQFCFGDYLRNFFSMMLLSDSLARPEHVWSETWHLLSEDILIKKRDEF 865
Query: 901 NNRGMCL 907
N+ + L
Sbjct: 866 KNQELTL 872
Score = 133 bits (334), Expect = 5e-29
Identities = 61/116 (52%), Positives = 80/116 (68%)
Query: 4 KAQKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTS 63
K S +P FS+CC +G + LP+L + PEL+ LL+ D SRH+ IR YN +FA TS
Sbjct: 9 KKSNSENPKFSLCCGQGSVKLPFLKESPELIKKLLKGNDALSRHYRQFIRIYNMIFAMTS 68
Query: 64 IGGKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNR 119
+GGKVD + GRGP F + G NYH+IGSL P +GD K++QLYI DT+NEV+NR
Sbjct: 69 LGGKVDKSMPKGRGPAMFRLQGGNYHQIGSLKPKDGDYAKYSQLYIVDTENEVENR 124
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 371 bits (952), Expect = e-100
Identities = 182/419 (43%), Positives = 261/419 (61%), Gaps = 16/419 (3%)
Query: 500 YTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHGP 559
YTIEFQKRGLPHAHI++W+ YK +D +I AE+PD + P L++ VS M+HGP
Sbjct: 554 YTIEFQKRGLPHAHIIVWMDPRYKFPIADHVDKIIFAEIPDKENDPKLYQAVSECMIHGP 613
Query: 560 CGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFVV 619
C L SPCM+NG+C+K++PK + + T D++GYP+YRRR+TG + DN +VV
Sbjct: 614 CRLVNPNSPCMENGKCSKYYPKNHVENTFLDNEGYPIYRRRDTGRFIKKNKYPCDNRYVV 673
Query: 620 PYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGR-----------TT 668
PYN LL KY+AHIN+E+CN+S S+KYLFKY+NKG DRVT+S+ R T
Sbjct: 674 PYNDFLLRKYRAHINVEWCNQSVSVKYLFKYVNKGPDRVTVSLEPHRKEVVSEENNVGET 733
Query: 669 QDKPVEDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEA 728
+ P E ++++ YFDCRY+S CEA+WRI Y IH++ V KLT+H KQ + KE E
Sbjct: 734 NNDPQEQNQVEDYFDCRYVSACEAMWRIKGYPIHYRQTLVTKLTFHEKGKQPIYVKEGET 793
Query: 729 IEDVLRRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQ-GESIG 787
E VL R + F AW + N + +L Y + P + ++ K K++ RK G +G
Sbjct: 794 AESVLYRVNDDETQFTAWFELNKRDPEAAKLLYEQIPNFYTWNGKDKNFRRRKMPGFVVG 853
Query: 788 RMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFID 847
R++ VPP + Y+LR+L+N RG ++D++++ VH T+R AC ALGLL DD+++I+
Sbjct: 854 RINHVPPKIDDAYHLRILINNIRGPKGFDDIKTIEGVVHKTYRDACYALGLLDDDKDYIN 913
Query: 848 GILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNNRGMC 906
GI + Y R LFV L+ S+ +P VW TW +L++ D QRK ++ C
Sbjct: 914 GIEEANFWCFHKYVRKLFVIMLIFESLSSPAVVWEHTWKILSE----DFQRKVRDKLKC 968
Score = 112 bits (281), Expect = 7e-23
Identities = 53/115 (46%), Positives = 74/115 (64%)
Query: 6 QKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTSIG 65
++ S S CCM+G+I+LP L + PE + L + +++F N+R YN +F+FTS+G
Sbjct: 118 KEHGSSTTSRCCMQGQIVLPMLKESPEYMWWLFTSDHPDAKNFRANVRPYNMLFSFTSLG 177
Query: 66 GKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRM 120
GKVD + GRGP F + G+NYH I +L P GD KF QLY+ DT NEV NR+
Sbjct: 178 GKVDRSVKKGRGPSMFALQGENYHLIDALKPKPGDYAKFQQLYVMDTDNEVDNRI 232
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 370 bits (951), Expect = e-100
Identities = 180/404 (44%), Positives = 259/404 (63%), Gaps = 10/404 (2%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YTIEFQKRGLPHAHIL++L + K + ID +I AE+PD + FE V N+M+HG
Sbjct: 689 IYTIEFQKRGLPHAHILIFLDKKDKCPDASEIDRIISAEIPDKEEDREGFEAVENFMMHG 748
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG +K SPCM +C + FPKK+ TT D DG+P YRRR+ G + V LDN +V
Sbjct: 749 PCGEAKSNSPCMIENKCIRNFPKKFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDNRYV 808
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVEDDEI 678
VPYN LL+KYQAHIN+E CN+S SIKYLFKY++KG D+ T + S + DEI
Sbjct: 809 VPYNRDLLVKYQAHINVERCNRSKSIKYLFKYMHKGDDQATALIES---------DHDEI 859
Query: 679 KQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVLRRNIV 738
K+Y +C Y+S +A WRIFQ+++H+++P V++L +HL +Q V+F ++ + ++R+ +
Sbjct: 860 KKYLECTYISGHDACWRIFQFEMHYRYPSVERLPFHLENEQQVIFPDSADLRKIVRKERI 919
Query: 739 KNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVPPGTGE 798
+ F WM+ N R LTY EFP +V+ K K W+ RK+G+ IGR+ + P +G+
Sbjct: 920 GVTKFTQWMETNKINDEARDLTYAEFPSKWVWKNKLKQWNKRKKGKMIGRIYYAHPASGD 979
Query: 799 LYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVATLAGG 858
YYLRMLLN +G +E++R+V+ VH +F+ ACEALG L DDRE+++ I + + A G
Sbjct: 980 KYYLRMLLNTVKGPRTFEEIRTVDGVVHPSFKSACEALGFLDDDREWVECIREASNYASG 1039
Query: 859 AYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNN 902
R LF + L + +P +W W L++ I QRK+ N
Sbjct: 1040 NQLRHLFTTILCHCEVTDPKRIWESCWEDLSEDIEYK-QRKNLN 1082
Score = 141 bits (355), Expect = 2e-31
Identities = 67/111 (60%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
Query: 11 PDFSICCMKGKIMLPYLADCPELLSNLL-RNTDTRSRHFLDNIRSYNSMFAFTSIGGKVD 69
P FS+CC +GK+ LP L P LSNL+ + RSR+++DNIR YNSMFAFTS+GGKVD
Sbjct: 265 PSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMDNIRVYNSMFAFTSMGGKVD 324
Query: 70 CGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRM 120
+N+G GP F ++GQNYHRI +L+P EGD P++AQLYIYDT+NEV+NR+
Sbjct: 325 REINNGSGPYVFRMNGQNYHRISTLLPEEGDKPRWAQLYIYDTENEVKNRI 375
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 370 bits (949), Expect = e-100
Identities = 189/436 (43%), Positives = 269/436 (61%), Gaps = 27/436 (6%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
MYT+EFQKRGLPHAHILL+++A KL + ID +I AE+P+ P L+E + N M+HG
Sbjct: 446 MYTVEFQKRGLPHAHILLFMAANSKLPTADDIDKIISAEIPNKDKEPELYEVIKNSMMHG 505
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + SPCM +G+C+K +PKK+ ++T +DGYP+YRRR T + GV DN +V
Sbjct: 506 PCGSANTSSPCMVDGQCSKLYPKKHQEITKVGADGYPIYRRRLTDDYIEKGGVKCDNRYV 565
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTL------SMSSGRTTQDKP 672
VPYN KL ++YQAHIN+E+CN++ SIKYLFKYINKG DRV +S TT
Sbjct: 566 VPYNKKLSLRYQAHINVEWCNQNGSIKYLFKYINKGPDRVVFIVEPIKEATSSDTTAPVV 625
Query: 673 VED------DEIKQYFDC---------RYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPR 717
D DEIK +FDC RY+S EA+WRIF++ I H+ PVQKL++H
Sbjct: 626 ESDTTEKKKDEIKDWFDCSSYISFSPARYVSASEAIWRIFKFPIQHRSTPVQKLSFHDKG 685
Query: 718 KQVVLFKENEAIEDVLRRNIVKNSMFLAWMDANCKYVHG------RQLTYVEFPELFVYD 771
KQ F + DVL R ++S FLAW+ N K G R Y E P F +D
Sbjct: 686 KQPAYFDAKAKMADVLERVSNEDSQFLAWLTLNRKNAVGKNGKRARDCLYAEIPAYFTWD 745
Query: 772 PKSKSWHPRKQGESIGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRG 831
++K + R +G S+GR+++V + YYLR+LLN+ RG Y+D+++VN V+ +++
Sbjct: 746 GENKQFKKRTRGFSLGRINYVSRKMEDEYYLRVLLNIVRGPQSYDDIKTVNGVVYPSYKL 805
Query: 832 ACEALGLLKDDREFIDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADG 891
AC A G+L DD+ +I+G+++ + G Y R F LL +S+ P HVW+ETWH+L++
Sbjct: 806 ACFARGILDDDQVYINGLIEASQFCFGDYLRNFFSMMLLSDSLARPEHVWSETWHLLSED 865
Query: 892 IACDLQRKHNNRGMCL 907
I + + N+ + L
Sbjct: 866 ILIKKRDEFKNQELTL 881
Score = 133 bits (334), Expect = 5e-29
Identities = 61/116 (52%), Positives = 80/116 (68%)
Query: 4 KAQKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTS 63
K S +P FS+CC +G + LP+L + PEL+ LL+ D SRH+ IR YN +FA TS
Sbjct: 9 KKSNSENPKFSLCCGQGSVKLPFLKESPELIKKLLKGNDALSRHYRQFIRIYNMIFAMTS 68
Query: 64 IGGKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNR 119
+GGKVD + GRGP F + G NYH+IGSL P +GD K++QLYI DT+NEV+NR
Sbjct: 69 LGGKVDKSMPKGRGPAMFRLQGGNYHQIGSLKPKDGDYAKYSQLYIVDTENEVENR 124
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 369 bits (948), Expect = e-100
Identities = 181/412 (43%), Positives = 258/412 (61%), Gaps = 16/412 (3%)
Query: 500 YTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHGP 559
YTIEFQKRGLPHAHI++W+ YK +D +I AE+PD + P L++ VS M+HGP
Sbjct: 769 YTIEFQKRGLPHAHIIVWMDPRYKFPIADHVDKIIFAEIPDKENDPKLYQAVSECMIHGP 828
Query: 560 CGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFVV 619
C L SPCM+NG+C+K++PK + + T D++GYP+YRRR+TG + DN +VV
Sbjct: 829 CRLVNPNSPCMENGKCSKYYPKNHVENTFLDNEGYPIYRRRDTGRFIKKNKYPCDNRYVV 888
Query: 620 PYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGR-----------TT 668
PYN LL KY+AHIN+E+CN+S S+KYLFKY+NKG DRVT+S+ R T
Sbjct: 889 PYNDFLLRKYRAHINVEWCNQSVSVKYLFKYVNKGPDRVTVSLEPHRKEVVSEENNVGET 948
Query: 669 QDKPVEDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEA 728
+ P E ++++ YFDCRY+S CEA+WRI Y IH++ V KLT+H KQ + KE E
Sbjct: 949 NNDPQEQNQVEDYFDCRYVSACEAMWRIKGYPIHYRQTLVTKLTFHEKGKQPIYVKEGET 1008
Query: 729 IEDVLRRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQ-GESIG 787
E VL R + F AW + N + +L Y + P + ++ K K++ RK G +G
Sbjct: 1009 AESVLYRVNDDETQFTAWFELNKRDPEAAKLLYEQIPNFYTWNGKDKNFRRRKMPGFVVG 1068
Query: 788 RMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFID 847
R++ VPP + Y+LR+L+N RG ++D++++ VH T+R AC ALGLL DD+++I+
Sbjct: 1069 RINHVPPKIDDAYHLRILINNIRGPKGFDDIKTIEGVVHKTYRDACYALGLLDDDKDYIN 1128
Query: 848 GILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRK 899
GI + Y R LFV L+ S+ +P VW TW +L++ D QRK
Sbjct: 1129 GIEEANFWCFHKYVRKLFVIMLIFESLSSPAVVWEHTWKILSE----DFQRK 1176
Score = 112 bits (281), Expect = 7e-23
Identities = 53/115 (46%), Positives = 74/115 (64%)
Query: 6 QKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTSIG 65
++ S S CCM+G+I+LP L + PE + L + +++F N+R YN +F+FTS+G
Sbjct: 333 KEHGSSTTSRCCMQGQIVLPMLKESPEYMWWLFTSDHPDAKNFRANVRPYNMLFSFTSLG 392
Query: 66 GKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRM 120
GKVD + GRGP F + G+NYH I +L P GD KF QLY+ DT NEV NR+
Sbjct: 393 GKVDRSVKKGRGPSMFALQGENYHLIDALKPKPGDYAKFQQLYVMDTDNEVDNRI 447
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 369 bits (946), Expect = e-100
Identities = 179/404 (44%), Positives = 257/404 (63%), Gaps = 10/404 (2%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YTIEFQKRGLPHAHIL++L + K + ID +I AE+PD + FE V N+M+HG
Sbjct: 580 IYTIEFQKRGLPHAHILIFLDKKDKCPDASEIDRIISAEIPDKEEDREGFEAVENFMMHG 639
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG +K SPCM +C + FPKK+ TT D DG+P YRRR+ G + V LDN +V
Sbjct: 640 PCGEAKSNSPCMIENKCIRNFPKKFHSETTVDEDGFPTYRRRDNGRYIEKGNVKLDNRYV 699
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVEDDEI 678
VPYN LL+KYQAHIN+E CN+S SIKYLFKY++KG D+ T + S + DEI
Sbjct: 700 VPYNRDLLVKYQAHINVERCNRSKSIKYLFKYMHKGDDQATALIES---------DHDEI 750
Query: 679 KQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVLRRNIV 738
K+Y +C Y+S +A WRIFQ+++H+++P V++L +HL +Q V+F ++ + ++R+ +
Sbjct: 751 KKYLECTYISGHDACWRIFQFEMHYRYPSVERLPFHLENEQQVIFPDSADLRKIVRKERI 810
Query: 739 KNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVPPGTGE 798
+ F WM+ N R TY EFP +V+ K K W+ RK+G+ IGR+ + P +G+
Sbjct: 811 GVTKFTQWMETNKINDEARDFTYAEFPSKWVWKNKLKQWNKRKKGKMIGRIYYAHPASGD 870
Query: 799 LYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVATLAGG 858
YYLRMLLN +G +E++R+V+ VH +F+ ACEALG L DDRE+++ I + + A G
Sbjct: 871 KYYLRMLLNTVKGPRTFEEIRTVDGVVHPSFKSACEALGFLDDDREWVECIREASNYASG 930
Query: 859 AYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNN 902
R LF + L + +P +W W L + I QRK+ N
Sbjct: 931 NQLRHLFTTILCHCEVTDPKRIWESCWEDLGEDIEYK-QRKNLN 973
Score = 130 bits (326), Expect = 4e-28
Identities = 63/103 (61%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 19 KGKIMLPYLADCPELLSNLL-RNTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCGLNDGRG 77
+GK+ LP L P LSNL+ + RSR+++DNIR YNSMFAFTS+GGKVD +N+G G
Sbjct: 164 RGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNGSG 223
Query: 78 PPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRM 120
P F ++GQNYHRIG+L+P EGD P++AQLYIYDT+NEV+NR+
Sbjct: 224 PYVFRMNGQNYHRIGTLLPEEGDKPRWAQLYIYDTENEVKNRI 266
>gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353661|pir||H84464
probable helicase [imported] - Arabidopsis thaliana
Length = 1219
Score = 365 bits (937), Expect = 6e-99
Identities = 180/424 (42%), Positives = 267/424 (62%), Gaps = 28/424 (6%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
MYTIEFQKRGLPHAHIL+WL ++ KL ID I AE+PD P LFE + MVHG
Sbjct: 264 MYTIEFQKRGLPHAHILIWLDSKCKLTRAEHIDKAISAEIPDKLKDPELFEVIKEMMVHG 323
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG+ + PCM+NG+C+KF+PK + T D +G+P+YRRR ++ DN +V
Sbjct: 324 PCGVVNPKCPCMENGKCSKFYPKDHVPKTIIDKEGFPIYRRRRIDDFVQKKDFKCDNRYV 383
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDK------- 671
+PYN L ++Y+AHIN+E+CN+S S+KY+FKYI+KG DRVT+ + S +++K
Sbjct: 384 IPYNRSLSLRYRAHINVEWCNQSGSVKYIFKYIHKGPDRVTVVVGSSLNSKNKEKGKQKV 443
Query: 672 --------PVEDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLF 723
P + +E++ +F+CRY+S CEA WRI +Y IH++ V KL++HLP +Q + F
Sbjct: 444 NADTDGSEPKKKNEVEDFFNCRYVSACEAAWRILKYPIHYRSTSVMKLSFHLPGEQYIYF 503
Query: 724 KENEAIEDVLRRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQG 783
K +E +E VL + + S+ +A R+LTY P F YDPK K ++ RK+G
Sbjct: 504 KGDEEVETVLNKADLDGSIQIA-----------RKLTYPNIPTRFTYDPKEKKFNLRKKG 552
Query: 784 ESIGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDR 843
+IGR+++VP + YYLR+LLNV G +E+L++VN ++ ++ ACEALGLL +D+
Sbjct: 553 FAIGRINYVPRDIEDGYYLRILLNVVPGPRSFEELKTVNGVLYKEWKDACEALGLLDNDQ 612
Query: 844 EFIDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNNR 903
E+ID + + + G Y R LFV L +++ +P +VW TW L++ I + ++ N
Sbjct: 613 EYIDDLKRTSFWSSGWYLRQLFVIML--DALISPENVWAATWQHLSEDIQNEKKKYFNRP 670
Query: 904 GMCL 907
CL
Sbjct: 671 VTCL 674
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 359 bits (921), Expect = 4e-97
Identities = 172/388 (44%), Positives = 245/388 (62%), Gaps = 21/388 (5%)
Query: 506 KRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHGPCGLSKR 565
+ GLPHAHILL+L E K+ + A +D I AE+PD +P L E V M+HGPCGL+ +
Sbjct: 392 RAGLPHAHILLFLEKEAKIPTTADVDKFIWAEIPDKYTHPILHEVVKEMMIHGPCGLANK 451
Query: 566 ESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFVVPYNPKL 625
SPCM+ G+C+K FPK + T + DG+P+Y+RR+ G + G+ LDN FV+PYNP L
Sbjct: 452 NSPCMEKGKCSKKFPKDFTSSTHINKDGFPIYKRRDDGRFVEKNGILLDNRFVIPYNPTL 511
Query: 626 LMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVEDDEIKQYFDCR 685
L+KYQAHIN+E+ ++S +KYLFKYINKG D+VT + G +EIK+++DCR
Sbjct: 512 LLKYQAHINVEWVSQSKIVKYLFKYINKGNDKVTARIKEG-------TGPNEIKRWYDCR 564
Query: 686 YLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVLRRNIVKNSMFLA 745
Y+SPCEA WRIF +D+HH Q +++ ++E +EDVL + + S FLA
Sbjct: 565 YISPCEAAWRIFGFDLHHS-----------STSQNIIYDDDEDVEDVLNKEENQTSQFLA 613
Query: 746 WMDANCKYV---HGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVPPGTGELYYL 802
++ N K R+ TY+EFP FV+ K W R++ S+GR+ V P G+ +YL
Sbjct: 614 FLKTNKKIAEDPEARKFTYIEFPSHFVWKKKQMEWTLRQRSVSVGRVYHVTPSAGQRFYL 673
Query: 803 RMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVATLAGGAYTR 862
R+LLN +G T YED+++V ++ TF+ AC AL LL+DD+E+ID I++ + G Y R
Sbjct: 674 RILLNKVKGPTCYEDIKTVGGILYPTFKDACYALSLLEDDQEYIDTIIEASQWGSGRYMR 733
Query: 863 ALFVSFLLPNSMCNPLHVWNETWHVLAD 890
LF L S+ P HVW TW+ L+D
Sbjct: 734 RLFAQLLTSESLSTPYHVWLNTWNQLSD 761
>ref|NP_914485.1| P0489A01.23 [Oryza sativa (japonica cultivar-group)]
Length = 1489
Score = 358 bits (920), Expect = 5e-97
Identities = 182/409 (44%), Positives = 252/409 (61%), Gaps = 5/409 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YT+EFQKRGLPH H L+WL+A S ++ID ICAE+PD +E VS +M+HG
Sbjct: 505 LYTVEFQKRGLPHIHCLVWLAAPTAEISASVIDGFICAEIPDYDTDRLGYELVSEFMMHG 564
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + + CMKN +C+K +PK + D T D G+ +YRRRN G + G+ LDN V
Sbjct: 565 PCGDANKSCACMKNNKCSKNYPKDFQDETIIDEAGFTIYRRRNDGRHIIKNGIPLDNRSV 624
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSM-SSGRTTQDKPVED-- 675
VPYN KLL YQAHIN+E+CNKSN IKYLFKYI KG DR + ++G+TT P D
Sbjct: 625 VPYNMKLLKTYQAHINVEWCNKSNLIKYLFKYITKGQDRARIYFETTGKTTNASPNHDLA 684
Query: 676 --DEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVL 733
DEI +Y D R+LS CE++ R+F++DIH++ P V++L HLP K V +++ + VL
Sbjct: 685 PQDEILEYMDGRFLSTCESLHRLFEFDIHYRMPSVERLVVHLPGKNYVRYEKGSNLRAVL 744
Query: 734 RRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVP 793
+ K+SM W +AN KY LTY EFP+ ++P S+ W PR IGR+ +V
Sbjct: 745 KSPAAKSSMLTEWFEANKKYPKAHSLTYCEFPKEQTWEPSSRVWRPRTPAPKIGRIYYVH 804
Query: 794 PGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVA 853
P GELYYLRM+L + RG Y D+R+ N V+ T+R ACEA GLL+ D E+ +
Sbjct: 805 PTAGELYYLRMILMIVRGAQSYADVRTYNGIVYSTYREACEAQGLLEGDNEWYLLFDEAI 864
Query: 854 TLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNN 902
A R LFV+ LL S+ + ++++ W + D I L++ +N
Sbjct: 865 LTASSQQLRQLFVTILLYCSVIDVRSLFDKYWIHMTDDIHNRLKKALDN 913
Score = 110 bits (275), Expect = 3e-22
Identities = 60/119 (50%), Positives = 75/119 (62%), Gaps = 3/119 (2%)
Query: 8 SASPDFSICCMK--GKIMLPYLADCPELLSNLLR-NTDTRSRHFLDNIRSYNSMFAFTSI 64
S P ++ C GKI LP L PE L+ L+ N D RS+ FL IRSYNSMFAFTS+
Sbjct: 130 SKMPPLALTCTNNGGKIQLPKLRPPPEPLATLINFNGDARSKRFLRQIRSYNSMFAFTSM 189
Query: 65 GGKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMSHF 123
G +D +N G P F I+G +H IG L+P+ G PKFAQLYIY +NE QNR++ F
Sbjct: 190 GASIDKSINTGNAPYVFKINGVVHHWIGCLLPSHGSPPKFAQLYIYYPENETQNRLNIF 248
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 358 bits (918), Expect = 9e-97
Identities = 186/430 (43%), Positives = 263/430 (60%), Gaps = 5/430 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YT+EFQKRGLPH H L+WL+A S ++ID ICAE+PD +E VS +M+HG
Sbjct: 602 LYTVEFQKRGLPHIHCLVWLAAATADVSASIIDGFICAEIPDYDTDRLGYELVSEFMMHG 661
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + ++ PCMKN +C+K +PK + D T D G+ +YRRRN G S + G+ LDN V
Sbjct: 662 PCGDANKKCPCMKNDKCSKHYPKDFQDETIVDESGFTIYRRRNDGRSIMKNGILLDNRSV 721
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSM-SSGRTTQDKPVED-- 675
VPYN LL KY+AHINIE+CNKSN IKYLFKYI KG DR + ++G+T P D
Sbjct: 722 VPYNMALLKKYEAHINIEWCNKSNLIKYLFKYITKGHDRARIYFETTGKTQNASPNHDLA 781
Query: 676 --DEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVL 733
+EI +Y D R+LS CEA+ R+F++DIH++ PPV++L HLP K V +++ + VL
Sbjct: 782 PRNEILEYMDARFLSTCEALHRLFEFDIHYRVPPVERLVVHLPGKNFVRYEKGADLRAVL 841
Query: 734 RRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVP 793
K SM W + N K LTY EFP+ + ++P SK+WH R IGR+ +V
Sbjct: 842 ESPGAKRSMLTEWFETNKKNSKAHSLTYCEFPKEWTWEPSSKTWHERTPAPKIGRIYYVH 901
Query: 794 PGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVA 853
P GELYYLRMLL + +G Y D+R+ + V+ T+R ACEA GLL+ D E+ +
Sbjct: 902 PTAGELYYLRMLLMIVKGAQSYADVRTYDGVVYGTYREACEARGLLEGDNEWHLLFDEAI 961
Query: 854 TLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNNRGMCL*C*H** 913
A A R LFV+ LL S+ + ++++ W + D I L++ +N + H
Sbjct: 962 VTASSAQLRQLFVTVLLYCSVGDVRSLFDKYWLYMTDDIHNRLKKALDNPHCVIPHDHLL 1021
Query: 914 DFIRYHIIAI 923
+ + + +IA+
Sbjct: 1022 NMLLHELIAV 1031
Score = 121 bits (304), Expect = 1e-25
Identities = 60/112 (53%), Positives = 81/112 (71%), Gaps = 1/112 (0%)
Query: 13 FSICCMKGKIMLPYLADCPELLSNLLR-NTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCG 71
+++CC G+I LP L PE L++LL N D RS++FL IRSYNSMFAF+S+G +D
Sbjct: 181 YNLCCKGGRIQLPKLRAPPEPLASLLNYNGDARSKNFLRQIRSYNSMFAFSSMGAAIDKS 240
Query: 72 LNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMSHF 123
+N G P F I+G +HRIG+LVP+ G PKFAQLY+YD +NE+QNR++ F
Sbjct: 241 INTGNAPYVFKINGVVHHRIGTLVPSCGSPPKFAQLYVYDPENELQNRLNIF 292
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 355 bits (912), Expect = 5e-96
Identities = 170/394 (43%), Positives = 251/394 (63%), Gaps = 5/394 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
++TIEFQKRGLPHAHIL++L K + ID +ICAE+PD P FE V N+M+HG
Sbjct: 607 VFTIEFQKRGLPHAHILIFLDKRGKSLEPSQIDELICAEIPDRDKDPETFEAVKNFMMHG 666
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + +SPCM + +C +FFP+ ++D T D +P+YRRR+ G + V+L+NGFV
Sbjct: 667 PCGEANPKSPCMVDHKCNRFFPRGFSDETIIDEVNFPIYRRRDDGRQIKKGRVNLNNGFV 726
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVEDDEI 678
VPYN LL K+Q H+N+E+ N+S SIKYLFK I D+ T + T +K +DEI
Sbjct: 727 VPYNKDLLAKFQVHMNVEWFNRSRSIKYLFKSICNEDDQATAVVEE---TDEK--NNDEI 781
Query: 679 KQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVLRRNIV 738
K+Y C+Y + EA WRIF++ +H++ PPV++L++H +Q V+F ++ +++++RR
Sbjct: 782 KRYLGCKYTTATEACWRIFKFPLHYQEPPVERLSFHEENEQHVIFPDSTDLQEIVRRPRS 841
Query: 739 KNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVPPGTGE 798
+MF WM+ N ++ R+LTY EFP + +D K W RK G IGR+ P +GE
Sbjct: 842 GVTMFTEWMETNKRHEDARELTYSEFPTKWTWDKNVKKWVRRKGGMKIGRIYNAHPASGE 901
Query: 799 LYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVATLAGG 858
YYLR++LN +GCT +ED+R+VN VH +++ AC ALG L DD E+I+ I + + A G
Sbjct: 902 RYYLRVILNTAKGCTTFEDIRTVNGTVHSSYKSACHALGFLNDDSEWIECIKEASCWASG 961
Query: 859 AYTRALFVSFLLPNSMCNPLHVWNETWHVLADGI 892
R LF + L + +P +W +W L+ I
Sbjct: 962 MKLRQLFATVLCHCEVTDPKRLWESSWEKLSKDI 995
Score = 127 bits (319), Expect = 3e-27
Identities = 57/110 (51%), Positives = 80/110 (71%)
Query: 11 PDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTSIGGKVDC 70
P F +CC +GK+ LP L + P L++LL RS ++ NIRSYNSMFAFTS+GG VD
Sbjct: 184 PSFGLCCKQGKVALPPLKEQPPYLTSLLTRDGGRSTNYQQNIRSYNSMFAFTSMGGTVDR 243
Query: 71 GLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRM 120
+N+G GP F ++GQN+H IG+L+P + P+F QLY+YDT+NE++NR+
Sbjct: 244 KINNGHGPYIFRLNGQNHHHIGTLLPEGSNKPRFQQLYVYDTENEIENRI 293
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 354 bits (909), Expect = 1e-95
Identities = 167/394 (42%), Positives = 251/394 (63%), Gaps = 4/394 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
++TIEFQK+GLPHAHIL++L + K + ID +ICAE+PD P FE V N+M+HG
Sbjct: 622 IFTIEFQKKGLPHAHILIFLDKKEKCLKPSQIDKMICAEIPDSNKDPETFEAVKNFMMHG 681
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + +SPCM + +C ++FPK ++D T D +P+Y+RR+ G + ++L+NGFV
Sbjct: 682 PCGETNPKSPCMVDHKCDRYFPKGFSDETIIDEVNFPIYKRRDDGRQIKKGRINLNNGFV 741
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVEDDEI 678
VPYN LL+K+QAHIN+E+ N+S SI+YLFK I G D+ T + T +D +DEI
Sbjct: 742 VPYNKDLLVKFQAHINVEWFNRSKSIRYLFKSIYNGDDQATAVVEETDTAKD----NDEI 797
Query: 679 KQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVLRRNIV 738
K+Y C Y++ EA WRIF + +H++ P VQ+L +H+ +Q V+F ++ +++++R
Sbjct: 798 KRYLGCSYMTATEACWRIFTFPLHYQEPSVQRLFFHVENEQQVIFPDSTDLQEIIRHPRS 857
Query: 739 KNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVPPGTGE 798
+MF WM+ N K+ R+LTY EFP + + K K W RK + IGR+ P +GE
Sbjct: 858 GVTMFTEWMETNKKHEDARELTYSEFPTKWTWVNKVKKWVRRKGRKKIGRIYNAHPASGE 917
Query: 799 LYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVATLAGG 858
YYLR++LN +GCT +ED+R+VN VH +++ AC ALG L DD E+I+ I + + A G
Sbjct: 918 RYYLRVILNTAKGCTTFEDIRTVNGFVHSSYKSACHALGFLNDDNEWIECIKEASCWASG 977
Query: 859 AYTRALFVSFLLPNSMCNPLHVWNETWHVLADGI 892
+ LF + L + +P +W W L+ I
Sbjct: 978 IELQQLFATILCHCEVTDPKSLWESIWEELSKDI 1011
Score = 134 bits (336), Expect = 3e-29
Identities = 63/123 (51%), Positives = 83/123 (67%)
Query: 2 SVKAQKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAF 61
S Q+ P F +CC +GK+ LP L + P LS+LL S ++ NIRSYNSMFAF
Sbjct: 190 SFSRQRKNQPSFGLCCKQGKVALPPLKEPPHFLSSLLARDGGTSENYQQNIRSYNSMFAF 249
Query: 62 TSIGGKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMS 121
TS+GG VD +N GRGP F ++GQNYH IG+L+P + P+F QLYIYDT+NE++NR+
Sbjct: 250 TSMGGAVDRKINKGRGPYVFRLNGQNYHHIGTLLPKGSNKPRFQQLYIYDTENEIKNRIE 309
Query: 122 HFR 124
R
Sbjct: 310 ASR 312
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 351 bits (900), Expect = 1e-94
Identities = 180/412 (43%), Positives = 252/412 (60%), Gaps = 43/412 (10%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
MYT+EFQKRGLPHAHILL++ A+ KL + ID +I AE+PD + P L+E + N M+HG
Sbjct: 788 MYTVEFQKRGLPHAHILLFMHAKSKLPTADDIDKLISAEIPDKEKEPDLYEVIKNSMIHG 847
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + SPCM +G C+K +PKK+ D+T SDGYP+YRRR T + G+ DN +V
Sbjct: 848 PCGSANVNSPCMVDGECSKLYPKKHQDITKIGSDGYPIYRRRKTDDYVEKGGIKCDNRYV 907
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTT----QDKPVE 674
VPYN KL ++Y AHIN+E+CN++ SIKYLFKYINKG D+V + + T + P +
Sbjct: 908 VPYNKKLSLRYNAHINVEWCNQNGSIKYLFKYINKGPDKVVFIVEPTQQTTAGDSETPQQ 967
Query: 675 D--------DEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKEN 726
+ +EIK +FDCRY+S EAVWRIF+Y I H PVQKL++H+ KQ F
Sbjct: 968 EQGSAEKKKNEIKDWFDCRYVSASEAVWRIFKYPIQHISTPVQKLSFHVEGKQPAYFDPK 1027
Query: 727 EAIEDVLRRNIVKNSMFLAWMDANCKYVHG------RQLTYVEFPELFVYDPKSKSWHPR 780
IEDVL R +S F+AW+ N + G R+ Y E P F +D ++KS+ R
Sbjct: 1028 SNIEDVLERVANVDSQFMAWLTLNRRNAVGKNGKRARECLYAEIPAYFTWDGENKSFKKR 1087
Query: 781 KQGESIGRMSFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLK 840
+G SIGR+ +V + Y+LR+LLN+ RG T Y ++++ + V+ TF+ AC A G+L
Sbjct: 1088 TRGFSIGRIHYVSRKMEDEYFLRVLLNIVRGPTSYAEIKTYDGVVYKTFKEACFARGILD 1147
Query: 841 DDREFIDGILDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGI 892
DD+ FIDG+++ HV ++TWH+LA+ I
Sbjct: 1148 DDQVFIDGLVEAT-------------------------HVRSQTWHLLAEDI 1174
Score = 120 bits (301), Expect = 3e-25
Identities = 57/116 (49%), Positives = 75/116 (64%)
Query: 4 KAQKSASPDFSICCMKGKIMLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTS 63
K + + F++CC +G + LP+L + P LL NLL S+H+ DN R +N +FA TS
Sbjct: 350 KKETNKESVFTLCCGEGSVKLPFLKESPHLLKNLLSGNHPLSKHYRDNARIFNMVFAMTS 409
Query: 64 IGGKVDCGLNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNR 119
GGKVD + GRGP F + G NYH IGSL T GD K++QLYI DT+NEV+NR
Sbjct: 410 FGGKVDKSMPKGRGPAMFRLQGGNYHLIGSLKLTPGDYAKYSQLYIIDTENEVENR 465
>ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50509840|dbj|BAD32013.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 351 bits (900), Expect = 1e-94
Identities = 183/430 (42%), Positives = 261/430 (60%), Gaps = 5/430 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YT+EFQKRGLPH H L+WL+A S ++ID ICAE+PD +E VS +M+HG
Sbjct: 511 LYTVEFQKRGLPHIHCLVWLAAATADVSASIIDGFICAEIPDYDTDRLGYELVSEFMMHG 570
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PC + ++ PCMKN +C+K +PK + D T D G+ +YRRRN G S + G+ LDN V
Sbjct: 571 PCSDANKKCPCMKNDKCSKHYPKDFQDETIVDESGFTIYRRRNDGRSIMKNGILLDNRSV 630
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSM-SSGRTTQDKPVED-- 675
VPYN LL KY+AHIN+E+CNKSN IKYLFKYI KG DR + ++G+T P D
Sbjct: 631 VPYNMALLKKYEAHINVEWCNKSNLIKYLFKYITKGHDRARIYFETTGKTQNASPNHDLA 690
Query: 676 --DEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVL 733
+EI +Y D R+LS EA+ R+F++DIH++ PPV++L HLP K V +++ + VL
Sbjct: 691 PRNEILEYMDARFLSTYEALHRLFEFDIHYRVPPVERLVVHLPGKNFVRYEKGADLRAVL 750
Query: 734 RRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVP 793
K SM W + N K LTY EFP+ + ++P SK+WH R IGR+ +V
Sbjct: 751 ESPGAKRSMLTEWFETNKKNSKAHSLTYCEFPKEWTWEPSSKTWHERTPAPKIGRIYYVH 810
Query: 794 PGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVA 853
P GELYYLRMLL + +G Y D+R+ + V+ T+R ACEA GLL+ D E+ +
Sbjct: 811 PTAGELYYLRMLLMIVKGAQSYADVRTYDGVVYGTYREACEARGLLEGDNEWHLLFDEAI 870
Query: 854 TLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNNRGMCL*C*H** 913
A A R LFV+ LL S+ + ++++ W + D I L++ +N + H
Sbjct: 871 VTASSAQLRQLFVTVLLYCSVGDVRSLFDKYWLYMTDDIHNRLKKALDNPHCVIPHDHLL 930
Query: 914 DFIRYHIIAI 923
+ + + +IA+
Sbjct: 931 NMLLHELIAV 940
Score = 121 bits (304), Expect = 1e-25
Identities = 60/112 (53%), Positives = 81/112 (71%), Gaps = 1/112 (0%)
Query: 13 FSICCMKGKIMLPYLADCPELLSNLLR-NTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCG 71
+++CC G+I LP L PE L++LL N D RS++FL IRSYNSMFAF+S+G +D
Sbjct: 90 YNLCCKGGRIQLPKLRAPPEPLASLLNYNGDARSKNFLRQIRSYNSMFAFSSMGAAIDKS 149
Query: 72 LNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMSHF 123
+N G P F I+G +HRIG+LVP+ G PKFAQLY+YD +NE+QNR++ F
Sbjct: 150 INTGNAPYVFKINGVVHHRIGTLVPSCGSPPKFAQLYVYDPENELQNRLNIF 201
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 348 bits (894), Expect = 6e-94
Identities = 175/409 (42%), Positives = 245/409 (59%), Gaps = 5/409 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YT+EFQKRGLPH H ++W +A S +DS+ICAE+PD P + V +M+HG
Sbjct: 475 LYTVEFQKRGLPHIHCIVWRAAADAEFSATAVDSLICAEIPDVFSDPLGYALVDEFMIHG 534
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + CMKNG C+K FPK + + TT D G+ VYRRRN G + G+ LDN +V
Sbjct: 535 PCGDKNKSCVCMKNGHCSKHFPKGFQEETTMDEFGFTVYRRRNDGRYVVKNGIKLDNRWV 594
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVE---- 674
VPYN KLL KYQAHIN+E CNKSN IKYLFKYI KG DR L + T +K V+
Sbjct: 595 VPYNMKLLKKYQAHINVESCNKSNMIKYLFKYITKGGDRTKLYFETTGNTPNKTVDGTVL 654
Query: 675 -DDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVL 733
+EI +Y + R+LS CEA WR F++DIH++ P V++L HLP V +K+ ++ +L
Sbjct: 655 PPNEIDEYINARFLSTCEAFWRAFEFDIHYRVPAVERLPIHLPNMNFVQYKKGTDLKKLL 714
Query: 734 RRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVP 793
K +M W + N K+ + R LTY +FP+ + +D ++ W PR E IGR+ +V
Sbjct: 715 DSPAAKKTMLTEWFECNKKHPNARTLTYCDFPKQWTWDNSARCWRPRTPVEKIGRIYYVS 774
Query: 794 PGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVA 853
P GELYYLRMLL +G Y D+R+ V+ TFR ACE+ GLL++D ++ +
Sbjct: 775 PAAGELYYLRMLLMTVKGAKSYADVRTFEGTVYPTFRQACESRGLLENDNDWHLLFDEAI 834
Query: 854 TLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNN 902
A R LFV+ ++ S+ N ++++ W D I L+ +N
Sbjct: 835 VSASSLQLRQLFVTVVMFCSVGNVRSLFDKYWLYFTDDIQHRLRTALSN 883
Score = 119 bits (299), Expect = 6e-25
Identities = 59/112 (52%), Positives = 80/112 (70%), Gaps = 1/112 (0%)
Query: 13 FSICCMKGKIMLPYLADCPELLSNLLR-NTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCG 71
+++CC GKI LP L P++L+ LL+ + D +S+ FL IRSYNS+FAFTS+G V+
Sbjct: 52 YNLCCRGGKISLPELKYPPDMLAKLLKFDGDAQSKRFLRQIRSYNSLFAFTSLGADVEKS 111
Query: 72 LNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMSHF 123
+N+G P F I+G +HRIGSL+P G PKFAQLYIYDT+NE NR++ F
Sbjct: 112 INNGTAPYVFKINGVVHHRIGSLLPQRGAKPKFAQLYIYDTENETANRINIF 163
>dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1652
Score = 348 bits (894), Expect = 6e-94
Identities = 175/409 (42%), Positives = 245/409 (59%), Gaps = 5/409 (1%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YT+EFQKRGLPH H ++W +A S +DS+ICAE+PD P + V +M+HG
Sbjct: 674 LYTVEFQKRGLPHIHCIVWRAAADAEFSATAVDSLICAEIPDVFSDPLGYALVDEFMIHG 733
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + CMKNG C+K FPK + + TT D G+ VYRRRN G + G+ LDN +V
Sbjct: 734 PCGDKNKSCVCMKNGHCSKHFPKGFQEETTMDEFGFTVYRRRNDGRYVVKNGIKLDNRWV 793
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTTQDKPVE---- 674
VPYN KLL KYQAHIN+E CNKSN IKYLFKYI KG DR L + T +K V+
Sbjct: 794 VPYNMKLLKKYQAHINVESCNKSNMIKYLFKYITKGGDRTKLYFETTGNTPNKTVDGTVL 853
Query: 675 -DDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAIEDVL 733
+EI +Y + R+LS CEA WR F++DIH++ P V++L HLP V +K+ ++ +L
Sbjct: 854 PPNEIDEYINARFLSTCEAFWRAFEFDIHYRVPAVERLPIHLPNMNFVQYKKGTDLKKLL 913
Query: 734 RRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRMSFVP 793
K +M W + N K+ + R LTY +FP+ + +D ++ W PR E IGR+ +V
Sbjct: 914 DSPAAKKTMLTEWFECNKKHPNARTLTYCDFPKQWTWDNSARCWRPRTPVEKIGRIYYVS 973
Query: 794 PGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGILDVA 853
P GELYYLRMLL +G Y D+R+ V+ TFR ACE+ GLL++D ++ +
Sbjct: 974 PAAGELYYLRMLLMTVKGAKSYADVRTFEGTVYPTFRQACESRGLLENDNDWHLLFDEAI 1033
Query: 854 TLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGIACDLQRKHNN 902
A R LFV+ ++ S+ N ++++ W D I L+ +N
Sbjct: 1034 VSASSLQLRQLFVTVVMFCSVGNVRSLFDKYWLYFTDDIQHRLRTALSN 1082
Score = 119 bits (299), Expect = 6e-25
Identities = 59/112 (52%), Positives = 80/112 (70%), Gaps = 1/112 (0%)
Query: 13 FSICCMKGKIMLPYLADCPELLSNLLR-NTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCG 71
+++CC GKI LP L P++L+ LL+ + D +S+ FL IRSYNS+FAFTS+G V+
Sbjct: 251 YNLCCRGGKISLPELKYPPDMLAKLLKFDGDAQSKRFLRQIRSYNSLFAFTSLGADVEKS 310
Query: 72 LNDGRGPPQFVISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMSHF 123
+N+G P F I+G +HRIGSL+P G PKFAQLYIYDT+NE NR++ F
Sbjct: 311 INNGTAPYVFKINGVVHHRIGSLLPQRGAKPKFAQLYIYDTENETANRINIF 362
>gb|AAD25621.1| Hypothetical protein [Arabidopsis thaliana]
gi|25353659|pir||A96586 hypothetical protein F20D21.24
[imported] - Arabidopsis thaliana
Length = 1250
Score = 346 bits (887), Expect = 4e-93
Identities = 175/403 (43%), Positives = 251/403 (61%), Gaps = 11/403 (2%)
Query: 499 MYTIEFQKRGLPHAHILLWLSAEYKLNSIAMIDSVICAEVPDPKLYPSLFECVSNYMVHG 558
+YTIEFQKRGLPHAHILLWL + K + ID I AE+P P V +M+HG
Sbjct: 357 VYTIEFQKRGLPHAHILLWLQGDLKKPTPNDIDKYISAEIPVKDKDPEGHTLVEQHMMHG 416
Query: 559 PCGLSKRESPCMKNGRCAKFFPKKYADVTTFDSDGYPVYRRRNTGVSTNRRGVDLDNGFV 618
PCG + SPCM+ G C+K FP+++ + T + G+ +YRRRN + LDN FV
Sbjct: 417 PCGKDRPSSPCMEKGICSKKFPREFVNHTKMNESGFILYRRRNDQRYVLKGQTRLDNRFV 476
Query: 619 VPYNPKLLMKYQAHINIEYCNKSNSIKYLFKYINKGVDRVTLSMSSGRTT---------Q 669
VP+N ++L KY+AHIN+E+CNKS++IKYLFKYI KGVD+ T + G + +
Sbjct: 477 VPHNLEILKKYKAHINVEWCNKSSAIKYLFKYITKGVDKATFIIQKGNSVNGQGSGNGFE 536
Query: 670 DKPVEDDEIKQYFDCRYLSPCEAVWRIFQYDIHHKWPPVQKLTYHLPRKQVVLFKENEAI 729
+KP +EI +Y DCRYLS CEA+WRIF ++IHH PPVQ+L HLP +Q +F+E E +
Sbjct: 537 EKP--RNEINEYLDCRYLSACEAMWRIFMFNIHHHNPPVQRLPLHLPGEQSTIFEEEENL 594
Query: 730 EDVLRRNIVKNSMFLAWMDANCKYVHGRQLTYVEFPELFVYDPKSKSWHPRKQGESIGRM 789
E+V R + +M + + N R+L YV+ P +FV+D +K + RKQ E+IGR+
Sbjct: 595 ENVEYRYGHERTMLTEYFELNKICEDARKLKYVQVPTMFVWDSTNKMYTRRKQRENIGRI 654
Query: 790 SFVPPGTGELYYLRMLLNVQRGCTKYEDLRSVNNNVHDTFRGACEALGLLKDDREFIDGI 849
+ P G+LYYLR+LLN +G T ++ L++V VH++F+ AC GLL D+E+ D +
Sbjct: 655 VNILPTAGDLYYLRILLNKVKGATSFDYLKTVGGVVHESFKAACHTRGLLDGDKEWHDAM 714
Query: 850 LDVATLAGGAYTRALFVSFLLPNSMCNPLHVWNETWHVLADGI 892
+ A + R+LFV L+ + PL +W+ W +AD +
Sbjct: 715 DEAAQWSTSYLLRSLFVLILIYCEVSEPLKLWSHCWESMADDV 757
Score = 95.9 bits (237), Expect = 9e-18
Identities = 50/99 (50%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Query: 23 MLPYLADCPELLSNLLRNTDTRSRHFLDNIRSYNSMFAFTSIGGKVDCGLNDGRGPPQFV 82
+LP P++L LL T S H+ NIR+YNS+ AFTS+G ++D + GP F
Sbjct: 27 VLPPEPQPPQMLKKLL----TESPHYQRNIRTYNSILAFTSMGAQIDKNVMHKGGPFTFR 82
Query: 83 ISGQNYHRIGSLVPTEGDNPKFAQLYIYDTKNEVQNRMS 121
I GQN+H++GSLVP EG PK QLYI+DT NEV NR+S
Sbjct: 83 IHGQNHHKLGSLVPEEGKPPKILQLYIFDTANEVHNRIS 121
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.353 0.158 0.566
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,092,397,823
Number of Sequences: 2540612
Number of extensions: 81227169
Number of successful extensions: 373912
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 373429
Number of HSP's gapped (non-prelim): 272
length of query: 1408
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1267
effective length of database: 505,134,102
effective search space: 640004907234
effective search space used: 640004907234
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0110a.10