BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0105.6
(574 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana] gi|97585... 278 3e-73
ref|NP_568446.1| pseudo-response regulator 5 (APRR5) [Arabidopsi... 278 3e-73
dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa (jap... 264 7e-69
dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana] gi|2... 211 5e-53
pir||T02680 hypothetical protein At2g46790 [imported] - Arabidop... 201 5e-50
gb|AAN13129.1| unknown protein [Arabidopsis thaliana] gi|1453263... 192 2e-47
gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana] 190 1e-46
dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana] g... 189 2e-46
gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana] 189 2e-46
dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa (indi... 182 3e-44
emb|CAB86035.1| putative protein [Arabidopsis thaliana] 181 7e-44
dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa (indi... 181 7e-44
dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa (japo... 181 7e-44
gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa ... 179 2e-43
dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa (japo... 176 1e-42
ref|XP_479630.1| putative pseudo-response regulator [Oryza sativ... 174 5e-42
dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thalian... 128 4e-28
gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa] 127 7e-28
gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crys... 126 2e-27
dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa (japon... 124 8e-27
>gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana] gi|9758535|dbj|BAB08930.1|
unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5
protein [Arabidopsis thaliana]
gi|52783225|sp|Q6LA42|APRR5_ARATH Two-component response
regulator-like APRR5 (Pseudo-response regulator 5)
Length = 558
Score = 278 bits (712), Expect = 3e-73
Identities = 210/564 (37%), Positives = 287/564 (50%), Gaps = 96/564 (17%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP+ ALR+LLVEADDSTRQIIAALLRKCSY+VAAV DGLKAWE LK K +DLILT
Sbjct: 42 ERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILT 101
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVDLPSISG++LLTLI +HD CK+IPVIMMS+ DSV+ V+KCMLKGAAD+L+KP+RRNEL
Sbjct: 102 EVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 161
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
RNLWQHVWRRQT P + N + ++N+S G + +AQS+
Sbjct: 162 RNLWQHVWRRQTSLAPD---SFPWNESVGQQKAEGASANNSNGKRDDHVVSGNGGDAQSS 218
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
CT P + ES +E +S DAV Q+E + N
Sbjct: 219 CTRPEMEGESADVE-------------VSARDAV------QMECAKSQFN---------- 249
Query: 251 PHISTEIRGCSDELLEPSSGAMDLI-AAFGNLPKRTIGNHSFHDGSTAKFEFDTQLELST 309
E R ++EL + A+D + A+F +R + S A++E +L+LS
Sbjct: 250 -----ETRLLANELQSKQAEAIDFMGASFRRTGRRN------REESVAQYESRIELDLSL 298
Query: 310 R----GDFPASEERLMLNHTNASAFSQY---------SSSKLFSENSPHESHELCENTNI 356
R + +S +R L+ ++ASAF++Y S+S + ++ + + +N +
Sbjct: 299 RRPNASENQSSGDRPSLHPSSASAFTRYVHRPLQTQCSASPVVTDQRKNVAASQDDNIVL 358
Query: 357 SHRYGGKNQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPA-----TGVSFDNVSTGDGD 411
++Y N N ++QL +P T +N+ D
Sbjct: 359 MNQYNTSEPPPNAPRRNDTSFYTGADSPGPPFSNQLNSWPGQSSYPTPTPINNIQFRD-- 416
Query: 412 VFPSMLYTQ-LTPKSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFTSDKCENDQS 470
P+ YT + P S+ SP P+S S H +S + K E Q
Sbjct: 417 --PNTAYTSAMAPASL-----SPSPSSVSP-----------HEYSSMFHPFNSKPEGLQD 458
Query: 471 NLDCAVNDSSATRQSSSTSFYHDSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHR 530
DC++ D R SS + + NH + DG S G +
Sbjct: 459 R-DCSM-DVDERRYVSSATEHSAIGNHIDQLIEKKN---EDGYSLSVG--------KIQQ 505
Query: 531 TSQREAALTKFRLKRKDRCYDKKV 554
+ QREAALTKFR+KRKDRCY+KKV
Sbjct: 506 SLQREAALTKFRMKRKDRCYEKKV 529
>ref|NP_568446.1| pseudo-response regulator 5 (APRR5) [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5
[Arabidopsis thaliana]
Length = 667
Score = 278 bits (712), Expect = 3e-73
Identities = 210/564 (37%), Positives = 287/564 (50%), Gaps = 96/564 (17%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP+ ALR+LLVEADDSTRQIIAALLRKCSY+VAAV DGLKAWE LK K +DLILT
Sbjct: 151 ERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILT 210
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVDLPSISG++LLTLI +HD CK+IPVIMMS+ DSV+ V+KCMLKGAAD+L+KP+RRNEL
Sbjct: 211 EVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 270
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
RNLWQHVWRRQT P + N + ++N+S G + +AQS+
Sbjct: 271 RNLWQHVWRRQTSLAPD---SFPWNESVGQQKAEGASANNSNGKRDDHVVSGNGGDAQSS 327
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
CT P + ES +E +S DAV Q+E + N
Sbjct: 328 CTRPEMEGESADVE-------------VSARDAV------QMECAKSQFN---------- 358
Query: 251 PHISTEIRGCSDELLEPSSGAMDLI-AAFGNLPKRTIGNHSFHDGSTAKFEFDTQLELST 309
E R ++EL + A+D + A+F +R + S A++E +L+LS
Sbjct: 359 -----ETRLLANELQSKQAEAIDFMGASFRRTGRRN------REESVAQYESRIELDLSL 407
Query: 310 R----GDFPASEERLMLNHTNASAFSQY---------SSSKLFSENSPHESHELCENTNI 356
R + +S +R L+ ++ASAF++Y S+S + ++ + + +N +
Sbjct: 408 RRPNASENQSSGDRPSLHPSSASAFTRYVHRPLQTQCSASPVVTDQRKNVAASQDDNIVL 467
Query: 357 SHRYGGKNQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPA-----TGVSFDNVSTGDGD 411
++Y N N ++QL +P T +N+ D
Sbjct: 468 MNQYNTSEPPPNAPRRNDTSFYTGADSPGPPFSNQLNSWPGQSSYPTPTPINNIQFRD-- 525
Query: 412 VFPSMLYTQ-LTPKSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFTSDKCENDQS 470
P+ YT + P S+ SP P+S S H +S + K E Q
Sbjct: 526 --PNTAYTSAMAPASL-----SPSPSSVSP-----------HEYSSMFHPFNSKPEGLQD 567
Query: 471 NLDCAVNDSSATRQSSSTSFYHDSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHR 530
DC++ D R SS + + NH + DG S G +
Sbjct: 568 R-DCSM-DVDERRYVSSATEHSAIGNHIDQLIEKKN---EDGYSLSVG--------KIQQ 614
Query: 531 TSQREAALTKFRLKRKDRCYDKKV 554
+ QREAALTKFR+KRKDRCY+KKV
Sbjct: 615 SLQREAALTKFRMKRKDRCYEKKV 638
>dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa (japonica
cultivar-group)] gi|52075943|dbj|BAD46023.1|
peudo-response regulator-like [Oryza sativa (japonica
cultivar-group)] gi|51571881|dbj|BAD38857.1|
pseudo-response regulator 95 [Oryza sativa (japonica
cultivar-group)]
Length = 623
Score = 264 bits (674), Expect = 7e-69
Identities = 207/592 (34%), Positives = 285/592 (47%), Gaps = 62/592 (10%)
Query: 12 RILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTE 71
R+LP+ +R+LL E DDSTR II ALLRKC Y+VAA DG+KAW+ LK K+ +IDL+LTE
Sbjct: 36 RMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 95
Query: 72 VDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELR 131
V+LP +SGF LL+ I +HD CK+IPVIMMSSNDSVSMVFKCMLKGAADFL+KP+R+NELR
Sbjct: 96 VELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELR 155
Query: 132 NLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQ----KNNETSE- 186
NLWQHVWR+Q + L + H + D E T + T+ KN E SE
Sbjct: 156 NLWQHVWRKQLSS---GVLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVVHKNMECSEQ 212
Query: 187 ---AQSTCTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEA 243
AQS+CT L A+S N+ + Q + S D K+T+ + H S
Sbjct: 213 ESDAQSSCTRSELEADSRQTNNLLEYKQ-PMGRHFSKPD----HKNTEKNGGTKIHASND 267
Query: 244 GEL-SKGNPHISTEIRGCSDEL-LEPSSGAMDLIAAFGNLPKRTIGNHSFHDGSTAKFEF 301
G L + S CS+++ E +S M+L+ N K H D + A
Sbjct: 268 GNLIPRREEDASLRRMTCSNDINCEKASRDMELVHIIDNQQKN--NTHMEMDVARANSRG 325
Query: 302 DT---------QLELS-TRGDFPASE-----ERLMLNHTNASAFSQYSSSKLFSENSPHE 346
+ QLELS R D+ E ER LNH+ +S FS Y+ S + +
Sbjct: 326 NDDKCFSIPAHQLELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGD 385
Query: 347 SHELCENTNISHRYGGKNQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPATGVSFDNVS 406
+ + C + KN + + + Q FP P G++FD
Sbjct: 386 A-QACSTSATHIDLENKNGDSKTPSQDKRETNQPPIRVVPFP------VPVGGLTFDGQP 438
Query: 407 TGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFTSDKCE 466
+G S+ Y Q P K TST + +++ + + D T + E
Sbjct: 439 FWNGAPVASLFYPQSAPPIWNSK------TSTWQDATTQAISLQQNGPKDTDTKQVENVE 492
Query: 467 NDQSNLDCAVNDSSATRQSSSTSFYHDSANHSSSG---VNGSGGSGSDGNVTSTGVDDEL 523
+ + N + + H S SG V S G+V + + +
Sbjct: 493 EQTARSHLSANRKHLRIEIPTDEPRHVSPTTGESGSSTVLDSARKTLSGSVCDSSSNHMI 552
Query: 524 RGTDS-----------HRTSQREAALTKFRLKRKDRCYDKKVLQPLQPCISE 564
T+S SQREAAL KFRLKRKDRC++KKV + ++E
Sbjct: 553 APTESSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAE 604
>dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein
[Arabidopsis thaliana] gi|9247022|gb|AAF86253.1| timing
of CAB expression 1-like protein [Arabidopsis thaliana]
gi|18407171|ref|NP_566085.1| pseudo-response regulator 9
(APRR9) / timing of CAB expression 1-like protein (TL1)
[Arabidopsis thaliana] gi|52783231|sp|Q8L500|APRR9_ARATH
Two-component response regulator-like APRR9
(Pseudo-response regulator 9)
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9
[Arabidopsis thaliana]
Length = 468
Score = 211 bits (537), Expect = 5e-53
Identities = 143/386 (37%), Positives = 188/386 (48%), Gaps = 74/386 (19%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
E+ LP+T LR+LLVE+D STRQII ALLRKC YKV AV DGL AWE LK K+H+IDLILT
Sbjct: 29 EKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILT 88
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
E+DLPSISGF+LL L+ +H+ CK+IPVIMMSS DS+ MV KCML+GAAD+LIKP+R+NEL
Sbjct: 89 ELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNEL 148
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
+NLWQHVWRR T+ P AH L A+ N + T
Sbjct: 149 KNLWQHVWRRLTLRDDP----TAHAQSLPASQHN-------------------LEDTDET 185
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
C ++ G S A+ + +L ME+ K E
Sbjct: 186 CEDSRYHSDQG-----------------SGAQAINYNGHNKL-MENGKSVDE-------- 219
Query: 251 PHISTEIRGCSDELLEPSSGAMDLIAAFGNLPKRTIGNHSFHDGSTAKFEFDTQLELSTR 310
DE E MDLI P + S + + + S
Sbjct: 220 ----------RDEFKETFDVTMDLIGGIDKRPDSIYKDKSRDECVGPELGLSLKRSCSVS 269
Query: 311 GDFPASEERLMLNHTNASAFSQYSSSKLFSE-------------NSPHESHELCENTNIS 357
+ + L+ ++ASAFS++ SK + +P ESHE + ++
Sbjct: 270 FENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEESTSGEPKTPTESHE--KLRKVT 327
Query: 358 HRYGGKNQNHNPENTNSMVIGQSGQV 383
G + N EN S + QV
Sbjct: 328 SDQGSATTSSNQENIGSSSVSFRNQV 353
Score = 53.5 bits (127), Expect = 2e-05
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 388 PNSQLGFFPATGVSFDN--------VSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTS 439
P L + VSF+N +S D F ++ K+V E S TS
Sbjct: 256 PELGLSLKRSCSVSFENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEES---TSGE 312
Query: 440 SQSNNESMKSEHHHWSDDATFTSDKCENDQSNLDCA-------VNDSSATRQSSSTSFYH 492
++ ES + SD + T+ ++Q N+ + V S+ T Q +
Sbjct: 313 PKTPTESHEKLRKVTSDQGSATTS---SNQENIGSSSVSFRNQVLQSTVTNQKQDSPIPV 369
Query: 493 DSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRT----------SQREAALTKFR 542
+S ++ GS S T+ G+ + T+ + SQREAAL KFR
Sbjct: 370 ESNREKAASKEVEAGSQS----TNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFR 425
Query: 543 LKRKDRCYDKKV 554
LKRKDRC+DKKV
Sbjct: 426 LKRKDRCFDKKV 437
>pir||T02680 hypothetical protein At2g46790 [imported] - Arabidopsis thaliana
Length = 454
Score = 201 bits (511), Expect = 5e-50
Identities = 142/396 (35%), Positives = 187/396 (46%), Gaps = 84/396 (21%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYK----------VAAVRDGLKAWETLKN 60
E+ LP+T LR+LLVE+D STRQII ALLRKC YK AV DGL AWE LK
Sbjct: 29 EKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKGRLVFPFISLFVAVSDGLAAWEVLKE 88
Query: 61 KAHDIDLILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADF 120
K+H+IDLILTE+DLPSISGF+LL L+ +H+ CK+IPVIMMSS DS+ MV KCML+GAAD+
Sbjct: 89 KSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADY 148
Query: 121 LIKPVRRNELRNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQK 180
LIKP+R+NEL+NLWQHVWRR T+ P AH L A+ N
Sbjct: 149 LIKPMRKNELKNLWQHVWRRLTLRDDP----TAHAQSLPASQHN---------------- 188
Query: 181 NNETSEAQSTCTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHN 240
+ TC ++ G S A+ + +L ME+ K
Sbjct: 189 ---LEDTDETCEDSRYHSDQG-----------------SGAQAINYNGHNKL-MENGKSV 227
Query: 241 SEAGELSKGNPHISTEIRGCSDELLEPSSGAMDLIAAFGNLPKRTIGNHSFHDGSTAKFE 300
E DE E MDLI P + S + +
Sbjct: 228 DE------------------RDEFKETFDVTMDLIGGIDKRPDSIYKDKSRDECVGPELG 269
Query: 301 FDTQLELSTRGDFPASEERLMLNHTNASAFSQYSSSKLFSE-------------NSPHES 347
+ S + + L+ ++ASAFS++ SK + +P ES
Sbjct: 270 LSLKRSCSVSFENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEESTSGEPKTPTES 329
Query: 348 HELCENTNISHRYGGKNQNHNPENTNSMVIGQSGQV 383
HE + ++ G + N EN S + QV
Sbjct: 330 HE--KLRKVTSDQGSATTSSNQENIGSSSVSFRNQV 363
Score = 53.5 bits (127), Expect = 2e-05
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 388 PNSQLGFFPATGVSFDN--------VSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTS 439
P L + VSF+N +S D F ++ K+V E S TS
Sbjct: 266 PELGLSLKRSCSVSFENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEES---TSGE 322
Query: 440 SQSNNESMKSEHHHWSDDATFTSDKCENDQSNLDCA-------VNDSSATRQSSSTSFYH 492
++ ES + SD + T+ ++Q N+ + V S+ T Q +
Sbjct: 323 PKTPTESHEKLRKVTSDQGSATTS---SNQENIGSSSVSFRNQVLQSTVTNQKQDSPIPV 379
Query: 493 DSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRT----------SQREAALTKFR 542
+S ++ GS S T+ G+ + T+ + SQREAAL KFR
Sbjct: 380 ESNREKAASKEVEAGSQS----TNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFR 435
Query: 543 LKRKDRCYDKKV 554
LKRKDRC+DKKV
Sbjct: 436 LKRKDRCFDKKV 447
>gb|AAN13129.1| unknown protein [Arabidopsis thaliana] gi|14532638|gb|AAK64047.1|
unknown protein [Arabidopsis thaliana]
gi|18414032|ref|NP_568107.1| pseudo-response regulator 7
(APRR7) [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5|APRR7_ARATH Two-component response
regulator-like APRR7 (Pseudo-response regulator 7)
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7
[Arabidopsis thaliana]
Length = 727
Score = 192 bits (488), Expect = 2e-47
Identities = 175/630 (27%), Positives = 275/630 (42%), Gaps = 96/630 (15%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER L +R+LLVE DD TR I+ ALLR CSY+V +G++AW+ L++ + ID++LT
Sbjct: 70 ERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLT 129
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG LL I +H ++IPVIMMSS+DS+ +VFKC+ KGA DFL+KP+R+NEL
Sbjct: 130 EVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNEL 189
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
+ LWQHVWRR + + H + ++ S+ +GS + +N S
Sbjct: 190 KILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGS-SDENENGSIGLNASD 248
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSD---------IDAVKQDKSTQL-----EMES 236
+S GA+S + D + +L D + + + S QL E E+
Sbjct: 249 GSSDGSGAQSSWTKKAVDVDDSPRAVSLWDRVDSTCAQVVHSNPEFPSNQLVAPPAEKET 308
Query: 237 PKHNSEAGELSKGNPHISTEIRGC------SDELLEPSSGAMDLIAAF---GNLPKRTIG 287
+H+ + +++ G + R C DE L ++G M +F + K +G
Sbjct: 309 QEHDDKFEDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVG 368
Query: 288 NHSFHDGSTAKFEFDTQLELSTRGDFPASEERLMLN------HTNASAFSQYSSSKLFSE 341
S + Q+ F A L N +T+ +S SE
Sbjct: 369 KGPLDLSSES--PSSKQMHEDGGSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISE 426
Query: 342 NSPHESHE-------------LCENTNISHR-YGGKNQNHNP-ENTNSMVIGQSGQVKTK 386
H H + ++ N+ R G +NP N N + G G +
Sbjct: 427 ELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQ 486
Query: 387 FPNSQLGFFPATGVSFD---------------NVSTGDGDVFPSMLYTQLTPKSVCQKES 431
NSQ T ++D +V + + D+ + T + K
Sbjct: 487 DNNSQ-DLIKKTEAAYDCHSNMNESLPHNHRSHVGSNNFDM------SSTTENNAFTKPG 539
Query: 432 SPFPTSTSSQSNNES----MKSEHH--HWSDDATFTSDK----------------CENDQ 469
+P +S S S S + +HH H S + +++ E +
Sbjct: 540 APKVSSAGSSSVKHSSFQPLPCDHHNNHASYNLVHVAERKKLPPQCGSSNVYNETIEGNN 599
Query: 470 SNLDCAVNDSSATRQSSSTSFYHDSANHSSSGVN--GSGGSGSDGNVTSTGVDDELRG-- 525
+ ++ +VN S + S Y S ++ G+N G+G +GN +G
Sbjct: 600 NTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGN 659
Query: 526 -TDSHRTSQREAALTKFRLKRKDRCYDKKV 554
D ++ SQREAALTKFR KRK+RC+ KKV
Sbjct: 660 LADENKISQREAALTKFRQKRKERCFRKKV 689
>gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 190 bits (482), Expect = 1e-46
Identities = 126/390 (32%), Positives = 197/390 (50%), Gaps = 48/390 (12%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP +L++LLVE DDSTR I+ ALL+ CSY+V AV D L+AW L+++ IDL+LT
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVD+P SG LL+ I H K+IPVIMMSS+DS+ +VFKC+ GA DFL+KP+R+NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
+NLWQHVWRR + + H+ K + + ND+ S++ +N S
Sbjct: 176 KNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTEGSENDA--SISDEHRNESGS----- 228
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
SG + N + S + S KST + P+ ++ G G
Sbjct: 229 ---------SGGLSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQFPESPNKKGTYENGC 279
Query: 251 PHISTEIRGCSDELLEPSSGAMDLIAAF------GNLPKRT--------IGNHSFHDGST 296
H++ ++ D+ + +G+ ++ G+L K N + S+
Sbjct: 280 AHVN-RLKEAEDQKEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERKNDDTLNRSS 338
Query: 297 AKFEFDTQLELSTRGDFPASE---------------ERLMLNHTNASAFSQYSSSKLFSE 341
+ +++ S R D + E +R +L H+N SAFS+Y++ ++
Sbjct: 339 GNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAK 398
Query: 342 NSPHESHELC--ENTNISHRYGGKNQNHNP 369
+P E+ E C ++ I+ G + + NP
Sbjct: 399 KAPEENVESCSPHDSPIAKLLGSSSSSDNP 428
Score = 54.7 bits (130), Expect = 8e-06
Identities = 50/175 (28%), Positives = 77/175 (43%), Gaps = 17/175 (9%)
Query: 391 QLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTSSQSNNESMKSE 450
Q+G TG+S + GD+ + Y SV E T S N++
Sbjct: 294 QIGTGSQTGMSMSKKAEEPGDLEKNAKY------SVQALERKNDDTLNRSSGNSQVESKA 347
Query: 451 HHHWSDDATFTSDKCENDQSNLDCAVNDSSATRQSSSTSF--YHDSANHSSSGV--NGSG 506
+D + + + D V D S R S+ ++F Y++ A + N
Sbjct: 348 PSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAKKAPEENVES 407
Query: 507 GSGSDGNV-----TSTGVDDELR--GTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
S D + +S+ D+ L+ + S R +QREAAL KFRLKRK+RC++KKV
Sbjct: 408 CSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKKV 462
>dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|18424319|ref|NP_568919.1| pseudo-response regulator 3
(APRR3) [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4|APRR3_ARATH Two-component response
regulator-like APRR3 (Pseudo-response regulator 3)
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3
[Arabidopsis thaliana]
Length = 495
Score = 189 bits (481), Expect = 2e-46
Identities = 133/385 (34%), Positives = 197/385 (50%), Gaps = 38/385 (9%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP +L++LLVE DDSTR I+ ALL+ CSY+V AV D L+AW L+++ IDL+LT
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVD+P SG LL+ I H K+IPVIMMSS+DS+ +VFKC+ GA DFL+KP+R+NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKL-----------DAAI--ENKPASNDSTGSVAS 177
+NLWQHVWRR + + H+ K DA+I E++ S S G
Sbjct: 176 KNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQ 235
Query: 178 TQKNNETSEAQSTCTSPILGAESGSMEN-MQDATQLKSS--------SNLSDIDAVKQDK 228
++ S QS+ T +S S N DA K + + L + + K+
Sbjct: 236 DGGSDNGSGTQSSWTKRASDTKSTSPSNQFPDAPNKKGTYENGCAHVNRLKEAEDQKEQI 295
Query: 229 ST--QLEMESPKHNSEAGELSKGNPHISTEIRGCSDELLEPSSGAMDLIAAFGNLPKRTI 286
T Q M K E G+L K + + +D+ L SSG + + P
Sbjct: 296 GTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERNNDDTLNRSSGNSQVES---KAPSSNR 352
Query: 287 GNHSFHDGSTAKFEFDTQLELSTRGDFPASEERLMLNHTNASAFSQYSSSKLFSENSPHE 346
+ + + K D ++ +R +L H+N SAFS+Y++ ++ +P E
Sbjct: 353 EDLQSLEQTLKKTREDRDYKVG---------DRSVLRHSNLSAFSKYNNGATSAKKAPEE 403
Query: 347 SHELC--ENTNISHRYGGKNQNHNP 369
+ E C ++ I+ G + + NP
Sbjct: 404 NVESCSPHDSPIAKLLGSSSSSDNP 428
Score = 55.1 bits (131), Expect = 6e-06
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 391 QLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTSSQSNNESMKSE 450
Q+G TG+S + GD+ + Y SV E + T S N++
Sbjct: 294 QIGTGSQTGMSMSKKAEEPGDLEKNAKY------SVQALERNNDDTLNRSSGNSQVESKA 347
Query: 451 HHHWSDDATFTSDKCENDQSNLDCAVNDSSATRQSSSTSF--YHDSANHSSSGV--NGSG 506
+D + + + D V D S R S+ ++F Y++ A + N
Sbjct: 348 PSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAKKAPEENVES 407
Query: 507 GSGSDGNV-----TSTGVDDELR--GTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
S D + +S+ D+ L+ + S R +QREAAL KFRLKRK+RC++KKV
Sbjct: 408 CSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKKV 462
>gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 189 bits (481), Expect = 2e-46
Identities = 125/390 (32%), Positives = 197/390 (50%), Gaps = 48/390 (12%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP +L++LLVE DDSTR I+ ALL+ CSY++ AV D L+AW L+++ IDL+LT
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EVD+P SG LL+ I H K+IPVIMMSS+DS+ +VFKC+ GA DFL+KP+R+NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEAQST 190
+NLWQHVWRR + + H+ K + + ND+ S++ +N S
Sbjct: 176 KNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTEGSENDA--SISDEHRNESGS----- 228
Query: 191 CTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEAGELSKGN 250
SG + N + S + S KST + P+ ++ G G
Sbjct: 229 ---------SGGLSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQFPESPNKKGTYENGC 279
Query: 251 PHISTEIRGCSDELLEPSSGAMDLIAAF------GNLPKRT--------IGNHSFHDGST 296
H++ ++ D+ + +G+ ++ G+L K N + S+
Sbjct: 280 AHVN-RLKEAEDQKEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERKNDDTLNRSS 338
Query: 297 AKFEFDTQLELSTRGDFPASE---------------ERLMLNHTNASAFSQYSSSKLFSE 341
+ +++ S R D + E +R +L H+N SAFS+Y++ ++
Sbjct: 339 GNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAK 398
Query: 342 NSPHESHELC--ENTNISHRYGGKNQNHNP 369
+P E+ E C ++ I+ G + + NP
Sbjct: 399 KAPEENVESCSPHDSPIAKLLGSSSSSDNP 428
Score = 54.7 bits (130), Expect = 8e-06
Identities = 50/175 (28%), Positives = 77/175 (43%), Gaps = 17/175 (9%)
Query: 391 QLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTSTSSQSNNESMKSE 450
Q+G TG+S + GD+ + Y SV E T S N++
Sbjct: 294 QIGTGSQTGMSMSKKAEEPGDLEKNAKY------SVQALERKNDDTLNRSSGNSQVESKA 347
Query: 451 HHHWSDDATFTSDKCENDQSNLDCAVNDSSATRQSSSTSF--YHDSANHSSSGV--NGSG 506
+D + + + D V D S R S+ ++F Y++ A + N
Sbjct: 348 PSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAKKAPEENVES 407
Query: 507 GSGSDGNV-----TSTGVDDELR--GTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
S D + +S+ D+ L+ + S R +QREAAL KFRLKRK+RC++KKV
Sbjct: 408 CSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKKV 462
>dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa (indica cultivar-group)]
Length = 704
Score = 182 bits (461), Expect = 3e-44
Identities = 187/674 (27%), Positives = 285/674 (41%), Gaps = 155/674 (22%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER + + +++LLV++DDSTRQ+++ALLR C Y+V +G +AW L++ + IDL+LT
Sbjct: 54 ERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLT 113
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG SLL+ I +H+ CK+IPVIMMSSND++ VFKC+ KGA DFL+KP+R+NEL
Sbjct: 114 EVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNEL 173
Query: 131 RNLWQHVWRRQTITKPP------QKLTLAHNNKLDAAIENKPASNDSTG-------SVAS 177
+NLWQHVWRR + Q A + D + N +++D +
Sbjct: 174 KNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVIMGLNARD 233
Query: 178 TQKNNETSEAQSTCTSPILGAES------GSMENMQDAT-----QLKSS--SN-----LS 219
N ++AQS+ T + +S + + D+T LKS SN S
Sbjct: 234 GSDNGSGTQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTS 293
Query: 220 DIDAVKQD------KSTQLEMESPKHNSEAGELSKGNPHISTEIR------------GCS 261
+ ++ KQ K LE+ SP++ + A + S I R
Sbjct: 294 NKNSKKQKETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAM 353
Query: 262 DELLEPSSGAMDLI------------AAFGNLP----KRTIGNHSFHDGSTAKFEFDTQL 305
+ L E S A DLI A N P K G D E +
Sbjct: 354 ENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNRDNIMPSLELSLKR 413
Query: 306 ELSTRGDFPA--SEERLMLNHTNASAFSQYSSSKLFSENSPHESHELCENTNISHRYGGK 363
ST D A E+R +L ++ SAF++Y + ++ + NIS
Sbjct: 414 SRSTGDDANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTD 473
Query: 364 NQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTP 423
+ + N+++ I Q N S+ + D+ + P
Sbjct: 474 SAYNMKSNSDAAPIKQG----------------------SNGSSNNNDMGSTTKNVVTKP 511
Query: 424 KSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFT----SDKCEND----------Q 469
+ ++ SP S + + S HW+ A T +D+ N+ Q
Sbjct: 512 STNKERVMSP---SAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVANNAAKRAQPGEVQ 568
Query: 470 SNL--------------DCAVNDSSATRQSSSTSFYH-----DSANHSSSGVNGSGGSGS 510
SNL N S Q S++ + +AN+ +G N +GS
Sbjct: 569 SNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGS 628
Query: 511 DG-NVTSTGVDDEL------------------------RGTDSH--RTSQRE---AALTK 540
+G N ++T VD E G D + R +QRE AA+ K
Sbjct: 629 NGQNGSTTAVDAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIK 688
Query: 541 FRLKRKDRCYDKKV 554
FR KRK+R + KKV
Sbjct: 689 FRQKRKERNFGKKV 702
>emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 181 bits (458), Expect = 7e-44
Identities = 168/623 (26%), Positives = 279/623 (43%), Gaps = 89/623 (14%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER L +R+LLVE DD TR I+ ALLR CSY+V +G++AW+ L++ + ID++LT
Sbjct: 70 ERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLT 129
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG LL I +H ++IPVIMMSS+DS+ +VFKC+ KGA DFL+KP+R+NEL
Sbjct: 130 EVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNEL 189
Query: 131 RNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDS-TGSVA--STQKNNETSEA 187
+ LWQH + + Q + + + ++ +S+++ GS+ ++ +++ S A
Sbjct: 190 KILWQHSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGA 249
Query: 188 QSTCTSPILGAESG----SMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEA 243
QS+ T + + S+ + D+T + + + + Q + E E+ +H+ +
Sbjct: 250 QSSWTKKAVDVDDSPRAVSLWDRVDSTCAQVVHSNPEFPS-NQLVAPPAEKETQEHDDKF 308
Query: 244 GELSKGNPHISTEIRGC------SDELLEPSSGAMDLIAAF---GNLPKRTIGNHSFHDG 294
+++ G + R C DE L ++G M +F + K +G
Sbjct: 309 EDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLS 368
Query: 295 STAKFEFDTQLELSTRGDFPASEERLMLN------HTNASAFSQYSSSKLFSENSPHESH 348
S + Q+ F A L N +T+ +S SE H H
Sbjct: 369 SES--PSSKQMHEDGGSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEH 426
Query: 349 E-------------LCENTNISHR-YGGKNQNHNP-ENTNSMVIGQSGQVKTKFPNSQLG 393
+ ++ N+ R G +NP N N + G G + NSQ
Sbjct: 427 SSKRHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQ-D 485
Query: 394 FFPATGVSFD---------------NVSTGDGDVFPSMLYTQLTPKSVCQKESSPFPTST 438
T ++D +V + + D+ + T + K +P +S
Sbjct: 486 LIKKTEAAYDCHSNMNESLPHNHRSHVGSNNFDM------SSTTENNAFTKPGAPKVSSA 539
Query: 439 SSQSNNES----MKSEHH--HWSDDATFTSDK----------------CENDQSNLDCAV 476
S S S + +HH H S + +++ E + + ++ +V
Sbjct: 540 GSSSVKHSSFQPLPCDHHNNHASYNLVHVAERKKLPPQCGSSNVYNETIEGNNNTVNYSV 599
Query: 477 NDSSATRQSSSTSFYHDSANHSSSGVN--GSGGSGSDGNVTSTGVDDELRG---TDSHRT 531
N S + S Y S ++ G+N G+G +GN +G D ++
Sbjct: 600 NGSVSGSGHGSNGPYGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKI 659
Query: 532 SQREAALTKFRLKRKDRCYDKKV 554
SQREAALTKFR KRK+RC+ KKV
Sbjct: 660 SQREAALTKFRQKRKERCFRKKV 682
>dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa (indica cultivar-group)]
Length = 767
Score = 181 bits (458), Expect = 7e-44
Identities = 103/231 (44%), Positives = 135/231 (57%), Gaps = 34/231 (14%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP LR+LLVE DDSTRQ+++ALLRKC Y+V +GL AW+ L++ + IDL+LT
Sbjct: 73 ERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLT 132
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG LL+ IT H CK IPVIMMSSNDS+ VFKC+ KGA DFL+KP+R+NEL
Sbjct: 133 EVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNEL 192
Query: 131 RNLWQHVWRR---------------QTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSV 175
+NLWQHVWRR Q TKP K+D EN SN+
Sbjct: 193 KNLWQHVWRRCHSSSGSGSESGIRTQKCTKP----------KVDDEYENNSGSNNDN--- 239
Query: 176 ASTQKNNETSEAQSTCTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQ 226
N+E + S + G+++GS TQ + +ID+ +Q
Sbjct: 240 EDDDDNDEDDDDLSVGHNARDGSDNGS------GTQSSWTKRAVEIDSPQQ 284
Score = 35.0 bits (79), Expect = 6.6
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 497 HSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
+ + G NGSG SGS ++ GV REAAL KFR KRK R + KKV
Sbjct: 688 NGAGGGNGSG-SGSGNDLYQNGV------------CYREAALNKFRQKRKVRNFGKKV 732
>dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa (japonica
cultivar-group)]
Length = 767
Score = 181 bits (458), Expect = 7e-44
Identities = 103/231 (44%), Positives = 135/231 (57%), Gaps = 34/231 (14%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP LR+LLVE DDSTRQ+++ALLRKC Y+V +GL AW+ L++ + IDL+LT
Sbjct: 73 ERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLT 132
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG LL+ IT H CK IPVIMMSSNDS+ VFKC+ KGA DFL+KP+R+NEL
Sbjct: 133 EVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNEL 192
Query: 131 RNLWQHVWRR---------------QTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSV 175
+NLWQHVWRR Q TKP K+D EN SN+
Sbjct: 193 KNLWQHVWRRCHSSSGSGSESGIRTQKCTKP----------KVDDEYENNSGSNNDN--- 239
Query: 176 ASTQKNNETSEAQSTCTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQ 226
N+E + S + G+++GS TQ + +ID+ +Q
Sbjct: 240 EDDDDNDEDDDDLSVGHNARDGSDNGS------GTQSSWTKRAVEIDSPQQ 284
Score = 35.0 bits (79), Expect = 6.6
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 497 HSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
+ + G NGSG SGS ++ GV REAAL KFR KRK R + KKV
Sbjct: 688 NGAGGGNGSG-SGSGNDLYQNGV------------CYREAALNKFRQKRKVRNFGKKV 732
>gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)] gi|50948993|ref|XP_493854.1| putative
pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 789
Score = 179 bits (455), Expect = 2e-43
Identities = 98/207 (47%), Positives = 126/207 (60%), Gaps = 28/207 (13%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER LP LR+LLVE DDSTRQ+++ALLRKC Y+V +GL AW+ L++ + IDL+LT
Sbjct: 73 ERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLT 132
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG LL+ IT H CK IPVIMMSSNDS+ VFKC+ KGA DFL+KP+R+NEL
Sbjct: 133 EVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNEL 192
Query: 131 RNLWQHVWRR---------------QTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSV 175
+NLWQHVWRR Q TKP K+D EN SN+
Sbjct: 193 KNLWQHVWRRCHSSSGSGSESGIRTQKCTKP----------KVDDEYENNSGSNNDN--- 239
Query: 176 ASTQKNNETSEAQSTCTSPILGAESGS 202
N+E + S + G+++GS
Sbjct: 240 EDDDDNDEDDDDLSVGHNARDGSDNGS 266
Score = 35.0 bits (79), Expect = 6.6
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 497 HSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
+ + G NGSG SGS ++ GV REAAL KFR KRK R + KKV
Sbjct: 710 NGAGGGNGSG-SGSGNDLYQNGV------------CYREAALNKFRQKRKVRNFGKKV 754
>dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 176 bits (447), Expect = 1e-42
Identities = 185/674 (27%), Positives = 283/674 (41%), Gaps = 155/674 (22%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER + + +++LLV++DDSTRQ+++ALLR C Y+V +G +AW L++ + IDL+LT
Sbjct: 54 ERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLT 113
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG SLL+ I +H+ CK+IPVIMMSSND++ VFKC+ KGA DFL+KP+R+NEL
Sbjct: 114 EVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNEL 173
Query: 131 RNLWQHVWRRQTITKPP------QKLTLAHNNKLDAAIENKPASNDSTG-------SVAS 177
+NLWQHVWRR + Q A + D + N +++D +
Sbjct: 174 KNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVIMGLNARD 233
Query: 178 TQKNNETSEAQSTCTSPILGAES------GSMENMQDAT-----QLKSS--SN-----LS 219
N ++AQS+ T + +S + + D+T LKS SN S
Sbjct: 234 GSDNGSGTQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTS 293
Query: 220 DIDAVKQD------KSTQLEMESPKHNSEAGELSKGNPHISTEIR------------GCS 261
+ ++ KQ K LE+ SP++ + A + S I R
Sbjct: 294 NKNSKKQKETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAM 353
Query: 262 DELLEPSSGAMDLI------------AAFGNLP----KRTIGNHSFHDGSTAKFEFDTQL 305
+ L E S A DLI A N P K G D E +
Sbjct: 354 ENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNRDNIMPSLELSLKR 413
Query: 306 ELSTRGDFPA--SEERLMLNHTNASAFSQYSSSKLFSENSPHESHELCENTNISHRYGGK 363
ST A E+R +L ++ SAF++Y + ++ + N S
Sbjct: 414 SRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTD 473
Query: 364 NQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTP 423
+ + N+++ I Q N S+ + D+ + P
Sbjct: 474 SAYNMKSNSDAAPIKQG----------------------SNGSSNNNDMGSTTKNVVTKP 511
Query: 424 KSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFT----SDKCEND----------Q 469
+ ++ SP S + + S HW+ A T +D+ N+ Q
Sbjct: 512 STNKERVMSP---SAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVANNAAKRAQPGEVQ 568
Query: 470 SNL--------------DCAVNDSSATRQSSSTSFYH-----DSANHSSSGVNGSGGSGS 510
SNL N S Q S++ + +AN+ +G N +GS
Sbjct: 569 SNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGS 628
Query: 511 DG-NVTSTGVDDEL------------------------RGTDSH--RTSQRE---AALTK 540
+G N ++T VD E G D + R +QRE AA+ K
Sbjct: 629 NGQNGSTTAVDAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIK 688
Query: 541 FRLKRKDRCYDKKV 554
FR KRK+R + KKV
Sbjct: 689 FRQKRKERNFGKKV 702
>ref|XP_479630.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)] gi|34394035|dbj|BAC84066.1| putative
pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 174 bits (442), Expect = 5e-42
Identities = 184/674 (27%), Positives = 283/674 (41%), Gaps = 155/674 (22%)
Query: 11 ERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILT 70
ER + + +++LLV++DDSTRQ+++ALLR C Y+V +G +AW L++ + IDL+LT
Sbjct: 54 ERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLT 113
Query: 71 EVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNEL 130
EV +P +SG SLL+ I +H+ CK+IPVIMMSSND++ VFKC+ KGA DFL+KP+R+NEL
Sbjct: 114 EVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNEL 173
Query: 131 RNLWQHVWRRQTITKPP------QKLTLAHNNKLDAAIENKPASNDSTG-------SVAS 177
+NLWQHVWRR + Q A + D + N +++D +
Sbjct: 174 KNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVIMGLNARD 233
Query: 178 TQKNNETSEAQSTCTSPILGAES------GSMENMQDAT-----QLKSS--SN-----LS 219
N ++AQS+ T + +S + + D+T LKS SN S
Sbjct: 234 GSDNGSGTQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTS 293
Query: 220 DIDAVKQD------KSTQLEMESPKHNSEAGELSKGNPHISTEIR------------GCS 261
+ ++ KQ K LE+ SP++ + A + S I R
Sbjct: 294 NKNSKKQKETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAM 353
Query: 262 DELLEPSSGAMDLI------------AAFGNLP----KRTIGNHSFHDGSTAKFEFDTQL 305
+ L E S A DLI A N P K G D E +
Sbjct: 354 ENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNRDNIMPSLELSLKR 413
Query: 306 ELSTRGDFPA--SEERLMLNHTNASAFSQYSSSKLFSENSPHESHELCENTNISHRYGGK 363
ST A E+R +L ++ SAF++Y + ++ + N S
Sbjct: 414 SRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTD 473
Query: 364 NQNHNPENTNSMVIGQSGQVKTKFPNSQLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTP 423
+ + N+++ I Q N S+ + D+ + P
Sbjct: 474 SAYNMKSNSDAAPIKQG----------------------SNGSSNNNDMGSTTKNVVTKP 511
Query: 424 KSVCQKESSPFPTSTSSQSNNESMKSEHHHWSDDATFT----SDKCEND----------Q 469
+ ++ SP S + + S HW+ A T +D+ N+ Q
Sbjct: 512 STNKERVMSP---SAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVANNAAKRAQPGEVQ 568
Query: 470 SNL--------------DCAVNDSSATRQSSSTSFYH-----DSANHSSSGVNGSGGSGS 510
SNL N S Q S++ + +AN+ +G N +GS
Sbjct: 569 SNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGS 628
Query: 511 DG-NVTSTGVDDEL------------------------RGTDSH--RTSQRE---AALTK 540
+G N ++T V+ E G D + R +QRE AA+ K
Sbjct: 629 NGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIK 688
Query: 541 FRLKRKDRCYDKKV 554
FR KRK+R + KKV
Sbjct: 689 FRQKRKERNFGKKV 702
>dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1
[Arabidopsis thaliana] gi|29028744|gb|AAO64751.1|
At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150
[Arabidopsis thaliana] gi|15240235|ref|NP_200946.1|
ABI3-interacting protein 1 (AIP1) [Arabidopsis thaliana]
gi|9247020|gb|AAF86252.1| timing of CAB expression 1
protein [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2|APRR1_ARATH Two-component response
regulator-like APRR1 (Pseudo-response regulator 1)
(Timing of CAB expression 1) (ABI3-interacting protein
1)
Length = 618
Score = 128 bits (322), Expect = 4e-28
Identities = 146/602 (24%), Positives = 246/602 (40%), Gaps = 123/602 (20%)
Query: 14 LPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDLILTEVD 73
+ ++ +RILL + D ++ + LL +CSY+V AV+ + + L + DID+IL E+D
Sbjct: 14 IDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEID 73
Query: 74 LPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRRNELRNL 133
LP G +L IT + IPVIMMS D V +V KC+ GAAD+L+KP+R NEL NL
Sbjct: 74 LPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNL 133
Query: 134 WQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDST--------GSVAST--QKNNE 183
W H+WRR+ + +K L+++ L + ++ P +N + S+ ST Q+ N
Sbjct: 134 WTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTNPQRGNL 193
Query: 184 TSEAQ--STCTSPI------LGAESGSMENMQDAT--------------QLKSSSNLSDI 221
+ + S T+P+ LGA+ + ++ +K +SN +
Sbjct: 194 SHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEPPLDHLAGSHHEPMKRNSNPAQF 253
Query: 222 DAVKQDKSTQLEMESP----------KHNSEAGELSKGNPHISTEIRGCSDEL-LEPSSG 270
+ + ++ S + N + L GN + RG +++ + S G
Sbjct: 254 SSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDGNGSLHLH-RGLAEKFQVVASEG 312
Query: 271 AMDLIAAFGNLPKRTI--------------GNHSFHDGSTAKFEFDTQLELSTRGDFPAS 316
+ A PK T+ G+H H G+ KF+ AS
Sbjct: 313 INNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGAAEKFQV------------VAS 360
Query: 317 EERLMLNHTNASAFS----QYSSSKLFSENSPHESHELCENTNISHRYGGKNQNHNPENT 372
E +N+T + S QY S +N H L + + +N+ N
Sbjct: 361 EG---INNTKQAHRSRGTEQYHSQGETLQNGASYPHSLERSRTLPTSMESHGRNYQEGNM 417
Query: 373 NSMVIGQSGQVKTKFPNSQLGFFPATGVSFDNVSTGDGDVFPSMLYTQLTPKSVCQKESS 432
N I Q ++K +SQ+ G F + + M + ++ +
Sbjct: 418 N---IPQVAMNRSK-DSSQVD-----GSGFSAPNAYPYYMHGVMNQVMMQSAAMMPQYGH 468
Query: 433 PFPTSTSSQSNNESMKSEHHHWSDDATFTSDKCENDQSNLDCAVNDSSATRQSSSTSFYH 492
P + N + +HH ++ ++ S + Q+ S H
Sbjct: 469 QIPHCQPNHPNGMTGYPYYHH-----------------PMNTSLQHSQMSLQNGQMSMVH 511
Query: 493 DSANHSSSGVNGSGGSGSDGNVTSTGVDDELRGTDSHRTSQREAALTKFRLKRKDRCYDK 552
S + + GN S +E+R ++ +RE AL KFR KR RC+DK
Sbjct: 512 HSWSPA-------------GNPPS----NEVR---VNKLDRREEALLKFRRKRNQRCFDK 551
Query: 553 KV 554
K+
Sbjct: 552 KI 553
>gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 127 bits (320), Expect = 7e-28
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 10/244 (4%)
Query: 8 GDVERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDL 67
G + + ++ +RIL+ + D + + ++ LL KCSY+V +VR + + L + +ID+
Sbjct: 21 GGGDAFIDRSKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDI 80
Query: 68 ILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRR 127
IL E+DLP G LL I + + IPVIMMS+ D VS+V KC+ GAAD+L+KP+R
Sbjct: 81 ILAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 140
Query: 128 NELRNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNETSEA 187
NEL NLW HVWRR+ + L LA N L+ + + + ++T +++T +
Sbjct: 141 NELLNLWTHVWRRR------RMLGLAEKNILNYDFDLVASDPSDANTNSTTLFSDDTDDR 194
Query: 188 QSTCTSPILG----AESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEA 243
T+P +G E S + ++ D+ + ++ Q K +
Sbjct: 195 SCRSTNPEMGLSVHEEDESAGAAVEPPYIELDEYRPDVPKISDRRTGQFSSGPKKSELKI 254
Query: 244 GELS 247
GE S
Sbjct: 255 GESS 258
Score = 39.7 bits (91), Expect = 0.27
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 530 RTSQREAALTKFRLKRKDRCYDKKV 554
+ +REAAL KFR KRK+RC+DKK+
Sbjct: 470 KVDRREAALIKFRQKRKERCFDKKI 494
>gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 126 bits (316), Expect = 2e-27
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 31/391 (7%)
Query: 4 PNDNGDVERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAH 63
P++ + + ++ +RILL + D + + + LL CSY+V AVR + + L +
Sbjct: 14 PSNARGSDPFIDRSKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGP 73
Query: 64 DIDLILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIK 123
DID+IL+EVDLP+ G +L I + IPVIMMS+ D VS+V KC+ GAAD+L+K
Sbjct: 74 DIDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADYLVK 133
Query: 124 PVRRNELRNLWQHVWRRQTITKPPQKLTLAHNNKLDAAIENKPASNDSTGSVASTQKNNE 183
P+R NE+ NLW H+WRR+ + +K + N D A + +N ++ ++ S ++
Sbjct: 134 PLRTNEMLNLWTHMWRRRQMLGLAEKNIV--NYDFDLAASDHSDANTNSTTLFSDDTDDR 191
Query: 184 TSEAQSTCTSPILGAESGSMENMQDATQLKSSSNLSDIDAVKQDKSTQLEMESPKHNSEA 243
+ + S + E S + D D+ + ++ Q + K +
Sbjct: 192 SRRGVNLEMSMTIQEEDESNKATSDPMPADLFDCRPDVPGICDRRTGQFVPFAKKSELKI 251
Query: 244 GELSKGNPHIST------------EIRGCSDELLEPSSGAMDLIAAFGNLPKRTIGNHSF 291
GE S ++ + E+ LE S ++ + GN+ R ++
Sbjct: 252 GECSAFFTYVKSSAVKNNCQAADVEVNHAQPSRLEDKSERLNEVVNNGNM--RCENGETW 309
Query: 292 HDGSTAKFEFDTQLELST---RGDFPAS---------EERLMLNHTNASAFSQYSSSKLF 339
+ S F T + ST R P S +E L H N+ + + S L
Sbjct: 310 ENNSNEDFRSSTSVPDSTSMERSCTPVSLDFMPNKSMDEGLSQVHMNSRNGAHFDVSGLA 369
Query: 340 SENSPHESHELCENTNIS---HRYGGKNQNH 367
P+ + +S H Y Q H
Sbjct: 370 HSAYPYYMSGMMNQVMMSSSAHMYRKDLQEH 400
Score = 40.4 bits (93), Expect = 0.16
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 7/45 (15%)
Query: 510 SDGNVTSTGVDDELRGTDSHRTSQREAALTKFRLKRKDRCYDKKV 554
S GN +S+ V +LR D +REAAL KFR KRK+RC+DKK+
Sbjct: 448 SFGNSSSSEV--KLREVD-----RREAALIKFRQKRKERCFDKKI 485
>dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa (japonica
cultivar-group)]
Length = 518
Score = 124 bits (311), Expect = 8e-27
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 6/184 (3%)
Query: 8 GDVERILPQTALRILLVEADDSTRQIIAALLRKCSYKVAAVRDGLKAWETLKNKAHDIDL 67
G+ ++ + ++ +RILL ++D S+ + + LL CSY+V + + L +A +ID+
Sbjct: 17 GEGQQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDI 76
Query: 68 ILTEVDLPSISGFSLLTLITDHDFCKHIPVIMMSSNDSVSMVFKCMLKGAADFLIKPVRR 127
IL EVDLP F +L I + +HIP+IMMS+ D VS+V KC+ GAA++L+KP+R
Sbjct: 77 ILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRM 136
Query: 128 NELRNLWQHVWRRQTITKPPQK------LTLAHNNKLDAAIENKPASNDSTGSVASTQKN 181
NEL NLW HVWRR+ + +K LA + DA + +D T N
Sbjct: 137 NELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENIN 196
Query: 182 NETS 185
ETS
Sbjct: 197 QETS 200
Score = 42.0 bits (97), Expect = 0.054
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 530 RTSQREAALTKFRLKRKDRCYDKKV 554
R+ +R AAL KFRLKRK+RC+DKKV
Sbjct: 439 RSERRAAALAKFRLKRKERCFDKKV 463
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.126 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 962,185,996
Number of Sequences: 2540612
Number of extensions: 40565360
Number of successful extensions: 208247
Number of sequences better than 10.0: 6770
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 5327
Number of HSP's that attempted gapping in prelim test: 183826
Number of HSP's gapped (non-prelim): 14732
length of query: 574
length of database: 863,360,394
effective HSP length: 133
effective length of query: 441
effective length of database: 525,458,998
effective search space: 231727418118
effective search space used: 231727418118
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0105.6