BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0105.17
(488 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC62625.1| rac GTPase activating protein 2 [Lotus japonicus] 858 0.0
dbj|BAC41982.1| putative rac GTPase activating protein [Arabidop... 472 e-131
emb|CAD41306.2| OSJNBa0020J04.11 [Oryza sativa (japonica cultiva... 422 e-117
gb|AAQ72348.1| Rho GTPase activating protein 2 [Oryza sativa (ja... 409 e-113
gb|AAX95236.1| rac GTPase activating protein 1 [Oryza sativa (ja... 396 e-109
gb|AAC62624.1| rac GTPase activating protein 1 [Lotus japonicus] 389 e-107
dbj|BAB08339.1| rac GTPase activating protein [Arabidopsis thali... 387 e-106
gb|AAG51449.1| putative rac GTPase activating protein; 62102-600... 384 e-105
emb|CAB77795.1| putative rac GTPase activating protein [Arabidop... 383 e-105
ref|NP_192219.2| rac GTPase activating protein, putative [Arabid... 383 e-105
gb|AAC62626.1| rac GTPase activating protein 3 [Lotus japonicus] 373 e-102
ref|XP_477664.1| rac GTPase activating protein 3 -like protein [... 365 1e-99
gb|AAQ72347.1| Rho GTPase activating protein 1 [Oryza sativa (ja... 359 1e-97
gb|AAC69928.1| putative rac GTPase activating protein [Arabidops... 340 5e-92
gb|AAF18245.1| T23G18.20 [Arabidopsis thaliana] 337 4e-91
ref|NP_172310.1| rac GTPase activating protein, putative [Arabid... 337 5e-91
pir||B86217 protein T27G7.4 [imported] - Arabidopsis thaliana gi... 329 1e-88
dbj|BAD29378.1| putative Rho GTPase activating protein 2 [Oryza ... 325 2e-87
ref|NP_914302.1| putative rac GTPase activating protein [Oryza s... 308 3e-82
gb|AAX94852.1| rac GTPase activating protein 1 [Oryza sativa (ja... 300 5e-80
>gb|AAC62625.1| rac GTPase activating protein 2 [Lotus japonicus]
Length = 424
Score = 858 bits (2217), Expect = 0.0
Identities = 423/424 (99%), Positives = 424/424 (99%)
Query: 65 NPAGSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLVTCSVDREDVSSLDISWPTEVRH 124
NPAGSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLVTCSVDREDVSSLDISWPTEVRH
Sbjct: 1 NPAGSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLVTCSVDREDVSSLDISWPTEVRH 60
Query: 125 VSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMM 184
VSHVTFDRFNGFLGLPTELQPEVPQKVP+ASAKVFGVSAKSMQCSYDERGNSVPTILLMM
Sbjct: 61 VSHVTFDRFNGFLGLPTELQPEVPQKVPTASAKVFGVSAKSMQCSYDERGNSVPTILLMM 120
Query: 185 QNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTG 244
QNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTG
Sbjct: 121 QNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTG 180
Query: 245 VLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAM 304
VLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAM
Sbjct: 181 VLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAM 240
Query: 305 VFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCKGDS 364
VFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCKGDS
Sbjct: 241 VFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCKGDS 300
Query: 365 HPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEKVWSSEEKGTGGGALESVSGGSS 424
HPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEKVWSSEEKGTGGGALESVSGGSS
Sbjct: 301 HPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEKVWSSEEKGTGGGALESVSGGSS 360
Query: 425 PSRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQHPVFQLSKSTKKRADLGIVNTREGGG 484
PSRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQHPVFQLSKSTKKRADLGIVNTREGGG
Sbjct: 361 PSRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQHPVFQLSKSTKKRADLGIVNTREGGG 420
Query: 485 EAWA 488
EAWA
Sbjct: 421 EAWA 424
>dbj|BAC41982.1| putative rac GTPase activating protein [Arabidopsis thaliana]
gi|28951019|gb|AAO63433.1| At2g46710 [Arabidopsis
thaliana] gi|30690481|ref|NP_850458.1| rac GTPase
activating protein, putative [Arabidopsis thaliana]
Length = 455
Score = 472 bits (1215), Expect = e-131
Identities = 270/503 (53%), Positives = 330/503 (64%), Gaps = 71/503 (14%)
Query: 1 MTRLFRSKSCGLV---EFNPSPPSPFFHNVKDEEDDEDDEEEEEEEEELYNDDEDDYWSN 57
MT RSKS G + EF P+ P P + E+ +++E EE ++ DY+
Sbjct: 1 MTNFSRSKSTGTIGFPEFKPTRPGP--------DKYENIHNDDDEYEEGHSTTSTDYYD- 51
Query: 58 PVSTPLINPAGSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLV-TCSVDRED---VSS 113
STPL + A G+ GQ ++D+L A L+KSLV +C+++R + V+S
Sbjct: 52 -ASTPLSSHASRSGNGSGSGQ--------LTVVDLLAAVLRKSLVMSCAMERGEDDVVAS 102
Query: 114 LDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDER 173
+DI WPTEV+HVSHVTFDRFNGFLGLP+EL+PEVP + PSAS VFGVSAKSMQCSYD+R
Sbjct: 103 MDIGWPTEVKHVSHVTFDRFNGFLGLPSELEPEVPPRAPSASVSVFGVSAKSMQCSYDDR 162
Query: 174 GNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGL 233
GNSVPTILL MQ RLY+EGGLKAEGIFRIN DN +EE VR QLN G+VPRG++VHCL+GL
Sbjct: 163 GNSVPTILLRMQKRLYTEGGLKAEGIFRINPDNGKEEHVRRQLNCGVVPRGIDVHCLAGL 222
Query: 234 IKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQ 293
IKAWFRELPTGVLD LTPEQVM CN+EEDC+ LV LLP E+A+LDWAI LMADVVEHEQ
Sbjct: 223 IKAWFRELPTGVLDVLTPEQVMRCNTEEDCSRLVILLPPVESAILDWAIGLMADVVEHEQ 282
Query: 294 FNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSS 353
FNKMNARN+AMVFAPNMTQM DPLTALIHAVQVMNFLKTLIL L+ER+ + AKAR L
Sbjct: 283 FNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILMNLKERENADAKARWLKK 342
Query: 354 LLNSPSCKGDSH------PFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEKVWSSE 407
+ PS + +S P K N V T + D +E+ W+ +
Sbjct: 343 QTSDPSEEWESQHSEILSPEKPNNNNPKFLRVATLCRLEADN----------EEEFWNIK 392
Query: 408 EKGTGGGALESVSGGSSPSRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQHPVFQLSKS 467
++ G L++ SG + GP V+RLC+HP+FQLSKS
Sbjct: 393 KRNDHEGVLDTSSGNGN-----IGP--------------------VQRLCKHPLFQLSKS 427
Query: 468 TKKRADLGIVNTREG--GGEAWA 488
TKK + N EG G EAW+
Sbjct: 428 TKKAF---VSNRDEGRKGREAWS 447
>emb|CAD41306.2| OSJNBa0020J04.11 [Oryza sativa (japonica cultivar-group)]
gi|50928153|ref|XP_473604.1| OSJNBa0020J04.11 [Oryza
sativa (japonica cultivar-group)]
Length = 479
Score = 422 bits (1086), Expect = e-117
Identities = 246/482 (51%), Positives = 302/482 (62%), Gaps = 47/482 (9%)
Query: 29 DEEDDEDDEEEEEEEEELYNDDEDDYWSNPVSTPLINPAGSKDKGNWRGQSHNQNQNQFA 88
DEE+++D++EE E EE+ +DD D S P + K G
Sbjct: 19 DEEEEDDEDEEGFEYEEILSDDGTD------SPPPLMMQAEKGGGG-------------- 58
Query: 89 ILDILVAALKKSLVTCSVDR---------EDVSSLDISWPTEVRHVSHVTFDRFNGFLGL 139
++ +V AL++SLV CS + E+ ++I PT+VRHVSHVTFDRF GFLGL
Sbjct: 59 LVGAVVGALRRSLVMCSAGKVGEEEDSEDEEEEGMEIGRPTDVRHVSHVTFDRFGGFLGL 118
Query: 140 PTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGI 199
P +L+PEVP PSAS VFGVS S+QCS+D +GNSVPTILLMMQ +LY GLK EGI
Sbjct: 119 PADLEPEVPSPTPSASVNVFGVSPTSLQCSFDHKGNSVPTILLMMQRKLYEREGLKIEGI 178
Query: 200 FRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNS 259
FRINA+NSQE VR QLN G+VP V++HCL+GLIKAWFRELPTGVLDSLTPEQVMHCN+
Sbjct: 179 FRINAENSQEICVRKQLNSGVVPDEVDLHCLAGLIKAWFRELPTGVLDSLTPEQVMHCNT 238
Query: 260 EEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTA 319
EEDC L +LP EAALLDWAINLMADVVEHE +NKMNARNIAMVFAPNMTQM DPLTA
Sbjct: 239 EEDCALLASMLPPVEAALLDWAINLMADVVEHENYNKMNARNIAMVFAPNMTQMADPLTA 298
Query: 320 LIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCKGDSHPFKDNREE----SS 375
LIHAVQVMNFLKTLILKTL+ER E+ + SP+ + D P +N E S
Sbjct: 299 LIHAVQVMNFLKTLILKTLKER-EAAGTPKTTEPCSGSPNGQ-DKPPTPENLERPIICSD 356
Query: 376 AQPVD-------TCATMPPDKSEFSRMEWCVDEKVWSSEEKGTGGGALESVS---GGSSP 425
+ +D TC + +F ++ + K E+ G S + G S
Sbjct: 357 QKGIDKPMFDMATCDQLLFGPKQF--LDHRENNKFEGPEKHDIGQPKRHSEASPLGNDSN 414
Query: 426 SRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQHPVFQLSKSTKKRADLGIVNTREGGGE 485
++ S E R + RKGV RLC+HPVFQLS+S KK AD+ + + +
Sbjct: 415 NQVSSPGKEFGNRNVEGLFDKFSFRKGVERLCRHPVFQLSRSMKKSADVVVFDAPGEARQ 474
Query: 486 AW 487
AW
Sbjct: 475 AW 476
>gb|AAQ72348.1| Rho GTPase activating protein 2 [Oryza sativa (japonica
cultivar-group)]
Length = 439
Score = 409 bits (1052), Expect = e-113
Identities = 236/452 (52%), Positives = 292/452 (64%), Gaps = 56/452 (12%)
Query: 58 PVSTPLINPAGSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLVTCSVDR--ED----- 110
PVS+PL+ PA G ++++ + AAL++SL+ CS R ED
Sbjct: 6 PVSSPLMLPAARGGGGGG-----------VSVVETVAAALRRSLLLCSSVRAAEDEGAAA 54
Query: 111 ----VSSLDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSM 166
+ + I PT+VRHVSHVTFDRF GFLGLP +L+P+VP+ PSAS VFGVS SM
Sbjct: 55 AAAAAAGMQIGRPTDVRHVSHVTFDRFVGFLGLPADLEPDVPRPAPSASVSVFGVSPTSM 114
Query: 167 QCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVE 226
QCSYD RGNSVPTILL MQ +LY GGL+AEGIFRINADNSQE VR QLN G+VP GV+
Sbjct: 115 QCSYDNRGNSVPTILLTMQKKLYQLGGLQAEGIFRINADNSQELHVREQLNMGVVPDGVD 174
Query: 227 VHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMA 286
+HCL+GLIKAWFRELP+GVLDSLTPEQVMHCN+EE+C L LP EAALLDWAINLMA
Sbjct: 175 MHCLTGLIKAWFRELPSGVLDSLTPEQVMHCNTEEECALLASTLPPVEAALLDWAINLMA 234
Query: 287 DVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMA 346
DVVEHE +NKMNARNIAMVFAPNMTQM DPLTALIHAVQVMNFLKTLILKT++ R+E+
Sbjct: 235 DVVEHENYNKMNARNIAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKTVKGREETAM 294
Query: 347 KARQLSSLLNSPSCKGD-------SHPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCV 399
+ S SPS K + P + ++++ P+ + AT+ D F
Sbjct: 295 PSSAFPSSSGSPSDKDEPQALEHLDKPTICSTQQNNDFPMISGATL--DHFLFRA----- 347
Query: 400 DEKVWSSEEKGTGGGALESVSGGSSPSRYESGPLES----------------RYRGIYDS 443
E + ++ +G+ G + + S E P++S G++D
Sbjct: 348 -EPLRHNDAQGSAGRPKKRDNKDHDNSSREFSPIDSDSSSQASNSASKFSNDNVEGLFDR 406
Query: 444 EHWLRLRKGVRRLCQHPVFQLSKSTKKRADLG 475
+ RKGV RLC+HPVFQLS+S KK + G
Sbjct: 407 ---FKFRKGVGRLCRHPVFQLSRSMKKSGEAG 435
>gb|AAX95236.1| rac GTPase activating protein 1 [Oryza sativa (japonica
cultivar-group)] gi|62732732|gb|AAX94851.1| rac GTPase
activating protein 1 [Oryza sativa (japonica
cultivar-group)]
Length = 479
Score = 396 bits (1017), Expect = e-109
Identities = 217/399 (54%), Positives = 273/399 (68%), Gaps = 27/399 (6%)
Query: 46 LYNDDEDDYWSNPVSTPLINPAGSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLVTCS 105
L N D D S +PAG ++ + + + +++ L +L+ L+KSL+ CS
Sbjct: 25 LANGDSDVSLPRRSSREEESPAGLQE------EEEEEEEERWSFLALLLELLRKSLLRCS 78
Query: 106 VDREDVSS--LDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSA 163
+E ++I WPT+V+HV+HVTFDRF+GFLGLP EL+PEVP++ PSASA VFGVS
Sbjct: 79 TVQEGGGECGMEIGWPTDVQHVAHVTFDRFHGFLGLPVELEPEVPRRAPSASASVFGVST 138
Query: 164 KSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPR 223
+SMQCSYD RGNSVPTILLMMQ RLY +GGL+AEGIFRINA+NSQEEFVR QLN G+VP
Sbjct: 139 ESMQCSYDSRGNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPD 198
Query: 224 GVEVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAIN 283
G+++HCLSGLIKAWFRELP+GVLDS+ PEQVM C SEEDC + K LP EAALL+WA+N
Sbjct: 199 GIDIHCLSGLIKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCLPPAEAALLEWAVN 258
Query: 284 LMADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDE 343
LMADVV+ EQ NKMNARNIAMVFAPNMTQM DPLTAL++AVQVMNFLK LI KTL+ R E
Sbjct: 259 LMADVVQEEQINKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQE 318
Query: 344 SMAKARQLSSLLNSPSCKGDSHPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEK- 402
S + + S P KD +ES C T+ E SR V+E+
Sbjct: 319 S--------------NLEDTSLPHKDPSDESGHH--KPCLTLESLLEEESRRPSFVEEEP 362
Query: 403 VWSSEEKGTGGGALE--SVSGGSSPSRYESGPLESRYRG 439
+ +S GTG +E V G ++ S ++ +++ G
Sbjct: 363 ILNSPAHGTGYNPIEVNPVQGKTAASIAQTSEVQTIIEG 401
>gb|AAC62624.1| rac GTPase activating protein 1 [Lotus japonicus]
Length = 493
Score = 389 bits (1000), Expect = e-107
Identities = 215/393 (54%), Positives = 271/393 (68%), Gaps = 39/393 (9%)
Query: 61 TPLINPAGSKDKGNWRGQSH--------------NQNQNQFAILDILVAALKKSLV-TCS 105
T LIN + S ++G + Q+H ++ +Q ++L +L+A L+KSL+ +CS
Sbjct: 22 TALINNSSSVEEGVLQLQTHLDLVEEDEEEEKEKDREGDQLSLLTLLIATLRKSLIGSCS 81
Query: 106 VDREDV-----SSLDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFG 160
D SS++I WP+ VRHV+HVTFDRF+GFLGLP E +PEVP++ PSAS VFG
Sbjct: 82 TSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTSVFG 141
Query: 161 VSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGL 220
VS +SMQ S+D RGNSVPTILL+MQ LY+ GGL+AEGIFRINA+NSQEE VR QLNRG+
Sbjct: 142 VSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQEELVREQLNRGV 201
Query: 221 VPRGVEVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDW 280
VP GV+VHCL+GLIKAWFRELPTG+LD L+PE+VM SEE+C LV+LLP TEAALLDW
Sbjct: 202 VPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSEEECDQLVRLLPPTEAALLDW 261
Query: 281 AINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRE 340
AINLMADV + E FNKMNARNIAMVFAPNMT M DPLTAL++AVQVMNFLKTL++KTLR
Sbjct: 262 AINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMNFLKTLVVKTLRV 321
Query: 341 RDESMAKARQLSSLLNSPSCKGDSHPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVD 400
R+ES+ K+ + +L + F D+ +S +Q +P D SE C D
Sbjct: 322 REESIVKSNPVPNL----------NSFDDDGHQSDSQ------VLPKDGSENGND--CSD 363
Query: 401 E-KVWSSEEKGTGGGALESVSGGSSPSRYESGP 432
E V+ S E + G + S E+ P
Sbjct: 364 EDTVFVSAEPSQPSPTHHTEDGCETESGSETSP 396
>dbj|BAB08339.1| rac GTPase activating protein [Arabidopsis thaliana]
gi|15242231|ref|NP_197632.1| rac GTPase activating
protein, putative [Arabidopsis thaliana]
Length = 466
Score = 387 bits (995), Expect = e-106
Identities = 186/271 (68%), Positives = 229/271 (83%)
Query: 77 GQSHNQNQNQFAILDILVAALKKSLVTCSVDREDVSSLDISWPTEVRHVSHVTFDRFNGF 136
G+ + ++Q ++L +LVA ++SL++C +R ++ S++I WPT VRHV+HVTFDRFNGF
Sbjct: 78 GEEDDGGEDQISLLALLVAIFRRSLISCKSNRRELCSMEIGWPTNVRHVAHVTFDRFNGF 137
Query: 137 LGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLKA 196
LGLP E +PEVP++ PSASA VFGVS +SMQ SYD RGN VPTILL+MQN LYS+GGL+A
Sbjct: 138 LGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYDSRGNCVPTILLLMQNCLYSQGGLQA 197
Query: 197 EGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTGVLDSLTPEQVMH 256
EGIFR+ A+NS+EE VR QLNRG +P ++VHCL+GLIKAWFRELPT VLDSL+PEQVM
Sbjct: 198 EGIFRLTAENSEEEAVREQLNRGFIPERIDVHCLAGLIKAWFRELPTSVLDSLSPEQVMQ 257
Query: 257 CNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVDP 316
C +EE+ LV+LLP TEAALLDWAINLMADVV++E NKMN+RNIAMVFAPNMTQM DP
Sbjct: 258 CQTEEENVELVRLLPPTEAALLDWAINLMADVVQYEHLNKMNSRNIAMVFAPNMTQMDDP 317
Query: 317 LTALIHAVQVMNFLKTLILKTLRERDESMAK 347
LTAL++AVQVMNFLKTLI KTLRER +S+ +
Sbjct: 318 LTALMYAVQVMNFLKTLIEKTLRERQDSVVE 348
>gb|AAG51449.1| putative rac GTPase activating protein; 62102-60058 [Arabidopsis
thaliana] gi|15229771|ref|NP_187756.1| rac GTPase
activating protein, putative [Arabidopsis thaliana]
Length = 435
Score = 384 bits (987), Expect = e-105
Identities = 211/408 (51%), Positives = 271/408 (65%), Gaps = 49/408 (12%)
Query: 16 NPSPPSPFFHNVKDEEDDEDDEEEEEEEEELYNDDEDDYWSNPVSTPLINPAGSKDKGNW 75
N P SPF N+ E++E++EE E+E E +
Sbjct: 32 NRDPHSPF--NISRREEEEEEEERSEKERERFELS------------------------- 64
Query: 76 RGQSHNQNQNQFAILDILVAALKKSLVTCSVDREDVSSLDISWPTEVRHVSHVTFDRFNG 135
+ L+ILV+A+++S++ V ED+ S++I PT+VRHV+HVTFDRF+G
Sbjct: 65 ------------SALEILVSAIRRSVIGGCVGEEDLCSMEIGVPTDVRHVAHVTFDRFHG 112
Query: 136 FLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLK 195
FLGLP E +PEVP++ PSASA VFGVS +SMQ SYD RGN VPTILLMMQ+ LYS GGL+
Sbjct: 113 FLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYDTRGNIVPTILLMMQSHLYSRGGLR 172
Query: 196 AEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTGVLDSLTPEQVM 255
EGIFRIN +N QEE++R +LN+G++P ++VHCL+ LIKAWFRELP+GVLDSL+PEQVM
Sbjct: 173 VEGIFRINGENGQEEYIREELNKGIIPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVM 232
Query: 256 HCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVD 315
SE++C LV+LLPSTEA+LLDWAINLMADVVE EQ NKMNARNIAMVFAPNMTQM+D
Sbjct: 233 ESESEDECVELVRLLPSTEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLD 292
Query: 316 PLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLL------NSPSCKGDSHPFKD 369
PLTAL++AVQVMNFLKTLI+KTL++R ES K S+ + S + H K
Sbjct: 293 PLTALMYAVQVMNFLKTLIVKTLKDRKESRDKLVPASNPSPRDHNGDQSSSRQLLHLMKA 352
Query: 370 NREES----SAQPVDTCATMPPDKSEFSRMEWCVDEKVWSSEEKGTGG 413
N+EE+ A+ D + ++ E + VD K S +GG
Sbjct: 353 NKEETLDNFEAEMKDKEESADEEEEECAESVELVDIKKSSLVNNSSGG 400
>emb|CAB77795.1| putative rac GTPase activating protein [Arabidopsis thaliana]
gi|4262138|gb|AAD14438.1| putative rac GTPase-activating
protein [Arabidopsis thaliana] gi|3924601|gb|AAC79102.1|
putative rac GTPase activating protein [Arabidopsis
thaliana] gi|7484995|pir||T01383 GTPase-activating
protein homolog T4I9.2 - Arabidopsis thaliana
Length = 424
Score = 383 bits (984), Expect = e-105
Identities = 195/317 (61%), Positives = 243/317 (76%), Gaps = 13/317 (4%)
Query: 78 QSHNQNQNQFAILDILVAALKKSLVTCSVD-RED-----------VSSLDISWPTEVRHV 125
+ QNQ Q ++++ L+ AL+KS+V+C VD R+D V ++I WPT VRH+
Sbjct: 24 EEEEQNQQQLSLVEFLLTALRKSVVSCRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHI 83
Query: 126 SHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMMQ 185
+HVTFDRF+GFLGLP ELQ E+P +VPSAS VFGVSA+SMQCSYDE+GNSVPTILL+MQ
Sbjct: 84 THVTFDRFHGFLGLPHELQVEIPCRVPSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQ 143
Query: 186 NRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTGV 245
RLYS+ GLKAEGIFRIN +NSQEE VR QLNRG+VP ++VHCL+GLIKAWFRELP+GV
Sbjct: 144 ERLYSQQGLKAEGIFRINPENSQEEHVRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGV 203
Query: 246 LDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMV 305
LD L+PE+V++CN+E++ L+K L TE+ALL+WA++LMADVVE E+ NKMNARNIAMV
Sbjct: 204 LDGLSPEEVLNCNTEDESVELIKQLKPTESALLNWAVDLMADVVEEEESNKMNARNIAMV 263
Query: 306 FAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPS-CKGDS 364
FAPNMTQM DPLTAL+HAVQVMN LKTLI KTL ER+E+ + S +S S DS
Sbjct: 264 FAPNMTQMTDPLTALMHAVQVMNLLKTLITKTLAEREENATGSEGYSPSHSSNSQTDSDS 323
Query: 365 HPFKDNREESSAQPVDT 381
+D +Q D+
Sbjct: 324 DNAQDMEVSCESQATDS 340
>ref|NP_192219.2| rac GTPase activating protein, putative [Arabidopsis thaliana]
Length = 430
Score = 383 bits (984), Expect = e-105
Identities = 195/317 (61%), Positives = 243/317 (76%), Gaps = 13/317 (4%)
Query: 78 QSHNQNQNQFAILDILVAALKKSLVTCSVD-RED-----------VSSLDISWPTEVRHV 125
+ QNQ Q ++++ L+ AL+KS+V+C VD R+D V ++I WPT VRH+
Sbjct: 30 EEEEQNQQQLSLVEFLLTALRKSVVSCRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHI 89
Query: 126 SHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMMQ 185
+HVTFDRF+GFLGLP ELQ E+P +VPSAS VFGVSA+SMQCSYDE+GNSVPTILL+MQ
Sbjct: 90 THVTFDRFHGFLGLPHELQVEIPCRVPSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQ 149
Query: 186 NRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTGV 245
RLYS+ GLKAEGIFRIN +NSQEE VR QLNRG+VP ++VHCL+GLIKAWFRELP+GV
Sbjct: 150 ERLYSQQGLKAEGIFRINPENSQEEHVRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGV 209
Query: 246 LDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMV 305
LD L+PE+V++CN+E++ L+K L TE+ALL+WA++LMADVVE E+ NKMNARNIAMV
Sbjct: 210 LDGLSPEEVLNCNTEDESVELIKQLKPTESALLNWAVDLMADVVEEEESNKMNARNIAMV 269
Query: 306 FAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPS-CKGDS 364
FAPNMTQM DPLTAL+HAVQVMN LKTLI KTL ER+E+ + S +S S DS
Sbjct: 270 FAPNMTQMTDPLTALMHAVQVMNLLKTLITKTLAEREENATGSEGYSPSHSSNSQTDSDS 329
Query: 365 HPFKDNREESSAQPVDT 381
+D +Q D+
Sbjct: 330 DNAQDMEVSCESQATDS 346
>gb|AAC62626.1| rac GTPase activating protein 3 [Lotus japonicus]
Length = 432
Score = 373 bits (958), Expect = e-102
Identities = 187/266 (70%), Positives = 218/266 (81%), Gaps = 5/266 (1%)
Query: 84 QNQFAILDILVAALKKSLVTCSVDRED-----VSSLDISWPTEVRHVSHVTFDRFNGFLG 138
QNQ + L+AALKKS+V CSVD D V ++I WPT V+HV+HVTFDRFNGFLG
Sbjct: 5 QNQGSPAAFLLAALKKSMVACSVDSPDDVISAVHPMEIGWPTNVKHVTHVTFDRFNGFLG 64
Query: 139 LPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEG 198
LP EL+ VP VPSAS VFGVSA+SM CSYD +GNSVPTILL+MQ RLYS+GGL AEG
Sbjct: 65 LPLELEVHVPAPVPSASVSVFGVSAESMHCSYDSKGNSVPTILLLMQERLYSQGGLMAEG 124
Query: 199 IFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCN 258
IFRIN +N QEE +R QLNRG+VP ++VHCL+GLIKAWFRELP+GVLD L+PEQV+ CN
Sbjct: 125 IFRINPENGQEEHLRDQLNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECN 184
Query: 259 SEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLT 318
+EE+ LVK L TE ALL+WA++LMADVVE E+ NKM+ARNIAMVFAPNMTQM DPLT
Sbjct: 185 TEEEFVQLVKQLKPTELALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLT 244
Query: 319 ALIHAVQVMNFLKTLILKTLRERDES 344
AL+HAVQVMN LKTLILKTL ER+E+
Sbjct: 245 ALMHAVQVMNLLKTLILKTLSEREEA 270
>ref|XP_477664.1| rac GTPase activating protein 3 -like protein [Oryza sativa
(japonica cultivar-group)] gi|33354208|dbj|BAC81174.1|
rac GTPase activating protein 3 -like protein [Oryza
sativa (japonica cultivar-group)]
Length = 487
Score = 365 bits (938), Expect = 1e-99
Identities = 188/304 (61%), Positives = 234/304 (76%), Gaps = 9/304 (2%)
Query: 68 GSKDKGNWRGQSHNQNQNQFAILDILVAALKKSLVT-CSV-DREDVSS----LDISWPTE 121
G+ G G++ Q Q +L +L+AAL++S+V C + D +D ++ ++I WPT+
Sbjct: 25 GAGGGGPGEGKAEGQ---QGQVLALLLAALRRSVVLPCQMADADDPAAVAWGMEIGWPTD 81
Query: 122 VRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDERGNSVPTIL 181
VRHV+HVTFDR NGFLGLP E + E+P VPSASA VFGVS +SMQC +D+ GNSVP IL
Sbjct: 82 VRHVAHVTFDRLNGFLGLPAEFELEIPGHVPSASASVFGVSPESMQCCFDDNGNSVPKIL 141
Query: 182 LMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIKAWFREL 241
L+MQ RLY++ GLKAEGIFRI +NSQEE VR QLNRGLVP ++VHCL+ LIKAWFREL
Sbjct: 142 LLMQERLYAQDGLKAEGIFRITPENSQEENVREQLNRGLVPDDIDVHCLASLIKAWFREL 201
Query: 242 PTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARN 301
P GVLDSL+PEQV+HCN+EE+C LV+LLP T+AALL+W + MADVVE E+ NKMNARN
Sbjct: 202 PEGVLDSLSPEQVLHCNTEEECVELVRLLPPTQAALLNWVVEFMADVVEEEESNKMNARN 261
Query: 302 IAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCK 361
+AMVFAPNMTQM DPLTAL+HAVQVMN LKTLILKTLRER+ ++ +SS +S
Sbjct: 262 VAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLREREHDESEYSAISSQSSSSDEL 321
Query: 362 GDSH 365
+ H
Sbjct: 322 DEMH 325
>gb|AAQ72347.1| Rho GTPase activating protein 1 [Oryza sativa (japonica
cultivar-group)]
Length = 364
Score = 359 bits (921), Expect = 1e-97
Identities = 189/302 (62%), Positives = 228/302 (74%), Gaps = 11/302 (3%)
Query: 114 LDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDER 173
++I WPT+VRHV+HVTFDRF+GFLGLP E + E+P +VPSASA VFGVSA+SMQC+YD +
Sbjct: 1 MEIGWPTDVRHVAHVTFDRFHGFLGLPVEFEVEMPCRVPSASASVFGVSAESMQCTYDGK 60
Query: 174 GNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGL 233
GNSVPTILL MQ RLY++GGLKAEGIFRIN +N QEE VR QLN+G+VP ++VHCL+ L
Sbjct: 61 GNSVPTILLHMQERLYAQGGLKAEGIFRINPENDQEEHVRDQLNKGVVPEDIDVHCLASL 120
Query: 234 IKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQ 293
IKAWFRELP GVLDSL+PEQV+ CNSE + LV LL T+AALL+WA+ LMADVVE E+
Sbjct: 121 IKAWFRELPEGVLDSLSPEQVLQCNSEGEFLELVTLLRPTQAALLNWAVELMADVVEEEE 180
Query: 294 FNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSS 353
NKMNARNIAMVFAPNMTQM DPLTAL+HAVQVMNFLKTLIL+TLRERD++ + S
Sbjct: 181 LNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNFLKTLILRTLRERDDAASGDYTPYS 240
Query: 354 LLNSPSCKGDSHPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEKV-----WSSEE 408
S S + D+ + R+ +D M SE SR VD V + SE+
Sbjct: 241 SPASSSQQNDAEYYGSERD------MDRSCEMSDMHSEISRSGRQVDFLVRYNTCFDSEQ 294
Query: 409 KG 410
+G
Sbjct: 295 EG 296
>gb|AAC69928.1| putative rac GTPase activating protein [Arabidopsis thaliana]
gi|25409023|pir||C84906 probable rac GTPase activating
protein [imported] - Arabidopsis thaliana
Length = 301
Score = 340 bits (873), Expect = 5e-92
Identities = 190/331 (57%), Positives = 223/331 (66%), Gaps = 46/331 (13%)
Query: 166 MQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGV 225
MQCSYD+RGNSVPTILL MQ RLY+EGGLKAEGIFRIN DN +EE VR QLN G+VPRG+
Sbjct: 1 MQCSYDDRGNSVPTILLRMQKRLYTEGGLKAEGIFRINPDNGKEEHVRRQLNCGVVPRGI 60
Query: 226 EVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLM 285
+VHCL+GLIKAWFRELPTGVLD LTPEQVM CN+EEDC+ LV LLP E+A+LDWAI LM
Sbjct: 61 DVHCLAGLIKAWFRELPTGVLDVLTPEQVMRCNTEEDCSRLVILLPPVESAILDWAIGLM 120
Query: 286 ADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESM 345
ADVVEHEQFNKMNARN+AMVFAPNMTQM DPLTALIHAVQVMNFLKTLIL L+ER+ +
Sbjct: 121 ADVVEHEQFNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILMNLKERENAD 180
Query: 346 AKARQLSSLLNSPSCKGDSH------PFKDNREESSAQPVDTCATMPPDKSEFSRMEWCV 399
AKAR L + PS + +S P K N V T + D
Sbjct: 181 AKARWLKKQTSDPSEEWESQHSEILSPEKPNNNNPKFLRVATLCRLEADN---------- 230
Query: 400 DEKVWSSEEKGTGGGALESVSGGSSPSRYESGPLESRYRGIYDSEHWLRLRKGVRRLCQH 459
+E+ W+ +++ G L++ SG + GP V+RLC+H
Sbjct: 231 EEEFWNIKKRNDHEGVLDTSSGNGN-----IGP--------------------VQRLCKH 265
Query: 460 PVFQLSKSTKKRADLGIVNTREG--GGEAWA 488
P+FQLSKSTKK + N EG G EAW+
Sbjct: 266 PLFQLSKSTKKAF---VSNRDEGRKGREAWS 293
>gb|AAF18245.1| T23G18.20 [Arabidopsis thaliana]
Length = 409
Score = 337 bits (865), Expect = 4e-91
Identities = 171/288 (59%), Positives = 217/288 (74%), Gaps = 14/288 (4%)
Query: 93 LVAALKKSLVTCSVDREDVSSLDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVP 152
+V L + T V+ D ++DI PT +RHV+HVTFDRF+GFLGLP+E +P+VP+K P
Sbjct: 53 VVLELARCFSTAEVEDNDRPAMDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAP 112
Query: 153 SASAKVFGVSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFV 212
SASA VFGVS +SMQ SYD RGN VP ILL++Q+RLY +GGL+AEG+FRI +NS+EEFV
Sbjct: 113 SASATVFGVSTESMQLSYDSRGNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFV 172
Query: 213 RCQLNRGLVPRGVEVHCLSGLIK-----AWFRELPTGVLDSLTPEQVMHCNSEEDCTNLV 267
R QLN+G++P G++VHCL+GLIK AWFRELP GVLD L EQVM C S+ED +V
Sbjct: 173 REQLNKGIIPDGIDVHCLAGLIKVLVVIAWFRELPRGVLDPLPSEQVMQCESDEDFVKVV 232
Query: 268 KLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVM 327
+LLP TEA+LL+WAINLMADV++ E NKMN+RN+A+VFAPNM+QM DPLTAL++AVQVM
Sbjct: 233 RLLPQTEASLLNWAINLMADVIQFEHVNKMNSRNLALVFAPNMSQMADPLTALMYAVQVM 292
Query: 328 NFLKTLILKTLRERDESMAKARQLSSLLNSPSCK--GDSHPFKDNREE 373
LK+L KT+RER+ S SS+++ K D KDN EE
Sbjct: 293 KLLKSLTEKTVREREAS-------SSVVDRRCSKEAEDGEKEKDNEEE 333
Score = 38.5 bits (88), Expect = 0.48
Identities = 19/48 (39%), Positives = 29/48 (59%)
Query: 6 RSKSCGLVEFNPSPPSPFFHNVKDEEDDEDDEEEEEEEEELYNDDEDD 53
R S +V+ S + KD E++E+DEEEEEEEE+ D+E++
Sbjct: 306 REASSSVVDRRCSKEAEDGEKEKDNEEEEEDEEEEEEEEDEDEDEEEE 353
>ref|NP_172310.1| rac GTPase activating protein, putative [Arabidopsis thaliana]
gi|48958519|gb|AAT47812.1| At1g08340 [Arabidopsis
thaliana] gi|46931246|gb|AAT06427.1| At1g08340
[Arabidopsis thaliana]
Length = 331
Score = 337 bits (864), Expect = 5e-91
Identities = 166/262 (63%), Positives = 208/262 (79%), Gaps = 9/262 (3%)
Query: 114 LDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQCSYDER 173
+DI PT +RHV+HVTFDRF+GFLGLP+E +P+VP+K PSASA VFGVS +SMQ SYD R
Sbjct: 1 MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60
Query: 174 GNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGVEVHCLSGL 233
GN VP ILL++Q+RLY +GGL+AEG+FRI +NS+EEFVR QLN+G++P G++VHCL+GL
Sbjct: 61 GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120
Query: 234 IKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQ 293
IKAWFRELP GVLD L EQVM C S+ED +V+LLP TEA+LL+WAINLMADV++ E
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180
Query: 294 FNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSS 353
NKMN+RN+A+VFAPNM+QM DPLTAL++AVQVM LK+L KT+RER+ S SS
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREAS-------SS 233
Query: 354 LLNSPSCK--GDSHPFKDNREE 373
+++ K D KDN EE
Sbjct: 234 VVDRRCSKEAEDGEKEKDNEEE 255
Score = 38.5 bits (88), Expect = 0.48
Identities = 19/48 (39%), Positives = 29/48 (59%)
Query: 6 RSKSCGLVEFNPSPPSPFFHNVKDEEDDEDDEEEEEEEEELYNDDEDD 53
R S +V+ S + KD E++E+DEEEEEEEE+ D+E++
Sbjct: 228 REASSSVVDRRCSKEAEDGEKEKDNEEEEEDEEEEEEEEDEDEDEEEE 275
>pir||B86217 protein T27G7.4 [imported] - Arabidopsis thaliana
gi|6664303|gb|AAF22885.1| T27G7.4 [Arabidopsis thaliana]
Length = 420
Score = 329 bits (843), Expect = 1e-88
Identities = 171/299 (57%), Positives = 217/299 (72%), Gaps = 25/299 (8%)
Query: 93 LVAALKKSLVTCSVDREDVSSLDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVP 152
+V L + T V+ D ++DI PT +RHV+HVTFDRF+GFLGLP+E +P+VP+K P
Sbjct: 53 VVLELARCFSTAEVEDNDRPAMDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAP 112
Query: 153 SA-----------SAKVFGVSAKSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFR 201
SA SA VFGVS +SMQ SYD RGN VP ILL++Q+RLY +GGL+AEG+FR
Sbjct: 113 SARFHIIILFVFGSATVFGVSTESMQLSYDSRGNCVPVILLLLQSRLYDQGGLQAEGVFR 172
Query: 202 INADNSQEEFVRCQLNRGLVPRGVEVHCLSGLIK-----AWFRELPTGVLDSLTPEQVMH 256
I +NS+EEFVR QLN+G++P G++VHCL+GLIK AWFRELP GVLD L EQVM
Sbjct: 173 ITGENSEEEFVREQLNKGIIPDGIDVHCLAGLIKVLVVIAWFRELPRGVLDPLPSEQVMQ 232
Query: 257 CNSEEDCTNLVKLLPSTEAALLDWAINLMADVVEHEQFNKMNARNIAMVFAPNMTQMVDP 316
C S+ED +V+LLP TEA+LL+WAINLMADV++ E NKMN+RN+A+VFAPNM+QM DP
Sbjct: 233 CESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEHVNKMNSRNLALVFAPNMSQMADP 292
Query: 317 LTALIHAVQVMNFLKTLILKTLRERDESMAKARQLSSLLNSPSCK--GDSHPFKDNREE 373
LTAL++AVQVM LK+L KT+RER+ S SS+++ K D KDN EE
Sbjct: 293 LTALMYAVQVMKLLKSLTEKTVREREAS-------SSVVDRRCSKEAEDGEKEKDNEEE 344
Score = 38.5 bits (88), Expect = 0.48
Identities = 19/48 (39%), Positives = 29/48 (59%)
Query: 6 RSKSCGLVEFNPSPPSPFFHNVKDEEDDEDDEEEEEEEEELYNDDEDD 53
R S +V+ S + KD E++E+DEEEEEEEE+ D+E++
Sbjct: 317 REASSSVVDRRCSKEAEDGEKEKDNEEEEEDEEEEEEEEDEDEDEEEE 364
>dbj|BAD29378.1| putative Rho GTPase activating protein 2 [Oryza sativa (japonica
cultivar-group)]
Length = 326
Score = 325 bits (833), Expect = 2e-87
Identities = 183/333 (54%), Positives = 222/333 (65%), Gaps = 34/333 (10%)
Query: 166 MQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPRGV 225
MQCSYD RGNSVPTILL MQ +LY GGL+AEGIFRINADNSQE VR QLN G+VP GV
Sbjct: 1 MQCSYDNRGNSVPTILLTMQKKLYQLGGLQAEGIFRINADNSQELHVREQLNMGVVPDGV 60
Query: 226 EVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLM 285
++HCL+GLIKAWFRELP+GVLDSLTPEQVMHCN+EE+C L LP EAALLDWAINLM
Sbjct: 61 DMHCLTGLIKAWFRELPSGVLDSLTPEQVMHCNTEEECALLASTLPPVEAALLDWAINLM 120
Query: 286 ADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDESM 345
ADVVEHE +NKMNARNIAMVFAPNMTQM DPLTALIHAVQVMNFLKTLILKT++ R+E+
Sbjct: 121 ADVVEHENYNKMNARNIAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKTVKGREETA 180
Query: 346 AKARQLSSLLNSPSCKGD-------SHPFKDNREESSAQPVDTCATMPPDKSEFSRMEWC 398
+ S SPS K + P + ++++ P+ + AT+ D F
Sbjct: 181 MPSSAFPSSSGSPSDKDEPQALEHLDKPTICSTQQNNDFPMISGATL--DHFLFRA---- 234
Query: 399 VDEKVWSSEEKGTGGGALESVSGGSSPSRYESGPLES----------------RYRGIYD 442
E + ++ +G+ G + + S E P++S G++D
Sbjct: 235 --EPLRHNDAQGSAGRPKKRDNKDHDNSSREFSPIDSDSSSQASNSASKFSNDNVEGLFD 292
Query: 443 SEHWLRLRKGVRRLCQHPVFQLSKSTKKRADLG 475
+ RKGV RLC+HPVFQLS+S KK + G
Sbjct: 293 R---FKFRKGVGRLCRHPVFQLSRSMKKSGEAG 322
>ref|NP_914302.1| putative rac GTPase activating protein [Oryza sativa (japonica
cultivar-group)] gi|21902083|dbj|BAC05631.1| putative
rac GTPase activating protein [Oryza sativa (japonica
cultivar-group)]
Length = 258
Score = 308 bits (788), Expect = 3e-82
Identities = 152/233 (65%), Positives = 180/233 (77%), Gaps = 1/233 (0%)
Query: 109 EDVSSLDISWPTEVRHVSHVTFDRFNGFLGLPTELQPEVPQKVPSASAKVFGVSAKSMQC 168
E ++I WPT+VRHV+HVTFDRF+GF GLP ELQPEV PSAS VFGVS +SMQC
Sbjct: 20 EQQPPMEIGWPTDVRHVAHVTFDRFHGFQGLPVELQPEVAGNAPSASKTVFGVSTESMQC 79
Query: 169 SYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPR-GVEV 227
SYD RGNSVP+ILL+MQ RLY +GGLKAEGIFRI AD++QE+ VR QLN G++P GV+V
Sbjct: 80 SYDARGNSVPSILLLMQRRLYEQGGLKAEGIFRIAADDAQEQAVREQLNSGVLPEGGVDV 139
Query: 228 HCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAINLMAD 287
HCL+GLIKAWFRELP G+LDSL +V C S +DC L LP+ +AALLDWA+ LMAD
Sbjct: 140 HCLAGLIKAWFRELPGGMLDSLPAAEVTRCQSADDCARLCARLPAAKAALLDWAVQLMAD 199
Query: 288 VVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRE 340
V E+ NKM +RN+AMVFAPNMT +DP TAL HAV VMNFL LI + L +
Sbjct: 200 VAREERSNKMGSRNVAMVFAPNMTHAMDPFTALKHAVHVMNFLTMLIDRALND 252
>gb|AAX94852.1| rac GTPase activating protein 1 [Oryza sativa (japonica
cultivar-group)]
Length = 444
Score = 300 bits (769), Expect = 5e-80
Identities = 164/279 (58%), Positives = 197/279 (69%), Gaps = 19/279 (6%)
Query: 164 KSMQCSYDERGNSVPTILLMMQNRLYSEGGLKAEGIFRINADNSQEEFVRCQLNRGLVPR 223
+SMQCSYD RGNSVPTILLMMQ RLY +GGL+AEGIFRINA+NSQEEFVR QLN G+VP
Sbjct: 104 ESMQCSYDSRGNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPD 163
Query: 224 GVEVHCLSGLIKAWFRELPTGVLDSLTPEQVMHCNSEEDCTNLVKLLPSTEAALLDWAIN 283
G+++HCLSGLIKAWFRELP+GVLDS+ PEQVM C SEEDC + K LP EAALL+WA+N
Sbjct: 164 GIDIHCLSGLIKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCLPPAEAALLEWAVN 223
Query: 284 LMADVVEHEQFNKMNARNIAMVFAPNMTQMVDPLTALIHAVQVMNFLKTLILKTLRERDE 343
LMADVV+ EQ NKMNARNIAMVFAPNMTQM DPLTAL++AVQVMNFLK LI KTL+ R E
Sbjct: 224 LMADVVQEEQINKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQE 283
Query: 344 SMAKARQLSSLLNSPSCKGDSHPFKDNREESSAQPVDTCATMPPDKSEFSRMEWCVDEK- 402
S + + S P KD +ES C T+ E SR V+E+
Sbjct: 284 S--------------NLEDTSLPHKDPSDESGHH--KPCLTLESLLEEESRRPSFVEEEP 327
Query: 403 VWSSEEKGTGGGALE--SVSGGSSPSRYESGPLESRYRG 439
+ +S GTG +E V G ++ S ++ +++ G
Sbjct: 328 ILNSPAHGTGYNPIEVNPVQGKTAASIAQTSEVQTIIEG 366
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.132 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 898,046,637
Number of Sequences: 2540612
Number of extensions: 41761400
Number of successful extensions: 472647
Number of sequences better than 10.0: 3589
Number of HSP's better than 10.0 without gapping: 2311
Number of HSP's successfully gapped in prelim test: 1338
Number of HSP's that attempted gapping in prelim test: 384208
Number of HSP's gapped (non-prelim): 37655
length of query: 488
length of database: 863,360,394
effective HSP length: 132
effective length of query: 356
effective length of database: 527,999,610
effective search space: 187967861160
effective search space used: 187967861160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0105.17