BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0103.2
(681 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001013248.1| selectin, platelet (p-selectin) ligand (pred... 45 0.006
ref|XP_343385.2| PREDICTED: similar to RIKEN cDNA D130054N24 gen... 44 0.013
gb|AAH49909.1| D130054N24Rik protein [Mus musculus] 44 0.017
ref|NP_848824.1| hypothetical protein LOC235315 [Mus musculus] g... 44 0.017
gb|AAH23073.1| D130054N24Rik protein [Mus musculus] 44 0.017
dbj|BAC37365.1| unnamed protein product [Mus musculus] 44 0.017
gb|AAH64100.1| D130054N24Rik protein [Mus musculus] 44 0.017
dbj|BAC28499.1| unnamed protein product [Mus musculus] 44 0.017
dbj|BAC27844.1| unnamed protein product [Mus musculus] 44 0.017
dbj|BAC26109.1| unnamed protein product [Mus musculus] 44 0.017
emb|CAD39108.1| hypothetical protein [Homo sapiens] 42 0.050
gb|AAV94609.1| lipoprotein, putative [Silicibacter pomeroyi DSS-... 42 0.050
ref|XP_508777.1| PREDICTED: similar to RIKEN cDNA D130054N24 gen... 42 0.050
dbj|BAC98249.1| mKIAA1760 protein [Mus musculus] 42 0.050
gb|AAH64581.1| Hypothetical protein DKFZp547C195 [Homo sapiens] ... 42 0.050
gb|AAB96174.1| Cytadherence High Molecular Weight Protein 2 (Swi... 42 0.050
gb|EAA50953.1| hypothetical protein MG04712.4 [Magnaporthe grise... 42 0.050
ref|XP_127323.4| PREDICTED: RIKEN cDNA 1810073P09 [Mus musculus] 42 0.050
gb|AAH60187.1| 1810073P09Rik protein [Mus musculus] 42 0.050
gb|AAH46464.1| 1810073P09Rik protein [Mus musculus] 42 0.050
>ref|NP_001013248.1| selectin, platelet (p-selectin) ligand (predicted) [Rattus
norvegicus] gi|20378986|gb|AAM21052.1| P-selectin
glycoprotein ligand precursor [Rattus norvegicus]
Length = 420
Score = 45.4 bits (106), Expect = 0.006
Identities = 63/263 (23%), Positives = 110/263 (40%), Gaps = 42/263 (15%)
Query: 421 SEDSLTPEHKAVIDFLARLAVSDCSRVIGDKASLLKIQASGKRPLGEEDPRPSPKRLNSS 480
S +S+T + ++ RLA ++ + + +K + S P+ E +P+P+ +S
Sbjct: 122 STESVTQRRLSPVEMTTRLAPTEAET---SQPAPIKAETSQPAPIKAETSQPAPREAETS 178
Query: 481 EPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPPAHTSTPSVGRI--SQLEKT 538
+P+ T + S+P P ++ P A TS P+ + SQ T
Sbjct: 179 QPAPT--------EAETSQP-------APTKAETSQPAPTEAETSQPAPTEVETSQPAPT 223
Query: 539 LAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAKALEEKLRS 598
AE Q A E+ + Q ASTE + L + +SA T+A E L +
Sbjct: 224 EAETSQPAPTEA--ETSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPTAMETLST 281
Query: 599 EDAVAAVSERGRGFFLAKAQVKHLHPLIDLSQMGAFKRVTPTGLVGPDDPPGFVVERFLT 658
E +A+ FL + + HL P L + G VTP + P PPG T
Sbjct: 282 EANESAI-------FLGPS-IGHL-PDTGLKK-GLI--VTPGSSLAP-TPPG-------T 321
Query: 659 EEHVELTQNVIFVIFVARVSIFF 681
+ + + Q ++ ++ +A ++ F
Sbjct: 322 SDLIPVKQCLLAILILASLATIF 344
>ref|XP_343385.2| PREDICTED: similar to RIKEN cDNA D130054N24 gene [Rattus
norvegicus]
Length = 650
Score = 44.3 bits (103), Expect = 0.013
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P S++PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 469 PILNPALSQSNQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 525
Query: 524 TSTPSVGRISQLEKTLAEL 542
T TP + +LEK L +L
Sbjct: 526 TETPRPQPVDKLEKILEKL 544
>gb|AAH49909.1| D130054N24Rik protein [Mus musculus]
Length = 594
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 378 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 434
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 435 SETPRPQPVDKLEKILEKL 453
>ref|NP_848824.1| hypothetical protein LOC235315 [Mus musculus]
gi|62826004|gb|AAH94247.1| Hypothetical protein
LOC235315 [Mus musculus] gi|26342002|dbj|BAC34663.1|
unnamed protein product [Mus musculus]
gi|26326199|dbj|BAC26843.1| unnamed protein product [Mus
musculus]
Length = 668
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 487 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 543
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 544 SETPRPQPVDKLEKILEKL 562
>gb|AAH23073.1| D130054N24Rik protein [Mus musculus]
Length = 306
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 90 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 146
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 147 SETPRPQPVDKLEKILEKL 165
>dbj|BAC37365.1| unnamed protein product [Mus musculus]
Length = 344
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 163 PILNPALSQSSQPSPPLPGSHGRNSHGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 219
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 220 SETPRPQPVDKLEKILEKL 238
>gb|AAH64100.1| D130054N24Rik protein [Mus musculus]
Length = 217
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 36 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 92
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 93 SETPRPQPVDKLEKILEKL 111
>dbj|BAC28499.1| unnamed protein product [Mus musculus]
Length = 714
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 487 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 543
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 544 SETPRPQPVDKLEKILEKL 562
>dbj|BAC27844.1| unnamed protein product [Mus musculus]
Length = 513
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 332 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 388
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 389 SETPRPQPVDKLEKILEKL 407
>dbj|BAC26109.1| unnamed protein product [Mus musculus]
Length = 613
Score = 43.9 bits (102), Expect = 0.017
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P SS+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 432 PILNPALSQSSQPSPPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGIKAS 488
Query: 524 TSTPSVGRISQLEKTLAEL 542
+ TP + +LEK L +L
Sbjct: 489 SETPRPQPVDKLEKILEKL 507
>emb|CAD39108.1| hypothetical protein [Homo sapiens]
Length = 232
Score = 42.4 bits (98), Expect = 0.050
Identities = 26/79 (32%), Positives = 37/79 (45%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P S+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 16 PILNPALSQPSQPSSPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGVKAS 72
Query: 524 TSTPSVGRISQLEKTLAEL 542
TP + +LEK L +L
Sbjct: 73 AETPRPQPVDKLEKILEKL 91
>gb|AAV94609.1| lipoprotein, putative [Silicibacter pomeroyi DSS-3]
gi|56696206|ref|YP_166563.1| lipoprotein, putative
[Silicibacter pomeroyi DSS-3]
Length = 687
Score = 42.4 bits (98), Expect = 0.050
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 434 DFLARLAVSDCSRVI----GDKASLLKIQASGKRPLGE-EDPRPSPKRLNSSEPSGTIPA 488
+ LAR+A + +R + DK +L+ A+ L ED +P ++EP+ PA
Sbjct: 56 EMLARIAEREIARQVEARRDDKGIVLRAAAAAPAALAAVEDAQPV-----AAEPAPAAPA 110
Query: 489 QHGLVDGSLSRPIVISSPRGPNLTSSANAPPP--------PAHTSTPSVGRISQLEKTLA 540
V+ L PI P A AP P PA TP + + + A
Sbjct: 111 A---VEAPLEAPIAEPVAEAPITEPVAEAPAPEPSDLTPEPAPEETPVIAEVEAEDAVEA 167
Query: 541 ELRQEAQLESSVKADQIASTEADLENLRS---DLAKKDDLLSSAKTQAHLDAKALEEKLR 597
E EA+ E A+ + EAD E + + D + D LL+S +Q + +E +
Sbjct: 168 EAEAEAETE----AEAEVALEADAEEIAAAAEDEEEADALLASIASQ--FENLPEDEAVD 221
Query: 598 SEDAVAA 604
ED V A
Sbjct: 222 EEDEVLA 228
>ref|XP_508777.1| PREDICTED: similar to RIKEN cDNA D130054N24 gene [Pan troglodytes]
Length = 732
Score = 42.4 bits (98), Expect = 0.050
Identities = 26/79 (32%), Positives = 37/79 (45%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P S+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 501 PILNPALSQPSQPSSPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGVKAS 557
Query: 524 TSTPSVGRISQLEKTLAEL 542
TP + +LEK L +L
Sbjct: 558 AETPRPQPVDKLEKILEKL 576
>dbj|BAC98249.1| mKIAA1760 protein [Mus musculus]
Length = 1332
Score = 42.4 bits (98), Expect = 0.050
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 23/188 (12%)
Query: 439 LAVSDCSRVIGDKASLLKIQASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLS 498
L S CS +G+ S ++ G+ PL P PSP + G P + G++S
Sbjct: 548 LEASRCSTGLGEPISTREVSTQGE-PLPASVPEPSPPTGATQSVPGQPPPPLPITVGAIS 606
Query: 499 RPIVISSPRGPNLTSSANAPPPP-------AHTSTPSVGRISQLEKTLAE-----LRQEA 546
+++P+ P+ APPPP P VG + K+L E L QE
Sbjct: 607 ----LAAPQLPSPPLGPTAPPPPPSALESDGEGPPPRVGFVDNTIKSLDEKLRTLLYQEH 662
Query: 547 QLESSVKAD---QIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAKALEEKLRSEDAVA 603
SS A + + + LE LR DL LS + EK + A
Sbjct: 663 VPTSSASAGTPMEASDRDFTLEPLRGDL---PSALSDKTPSLTQQTQPSLEKSETAPAGW 719
Query: 604 AVSERGRG 611
A+++R +G
Sbjct: 720 ALAQREQG 727
>gb|AAH64581.1| Hypothetical protein DKFZp547C195 [Homo sapiens]
gi|46409322|ref|NP_997226.1| hypothetical protein
LOC257160 [Homo sapiens]
Length = 640
Score = 42.4 bits (98), Expect = 0.050
Identities = 26/79 (32%), Positives = 37/79 (45%), Gaps = 9/79 (11%)
Query: 470 PRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPIVISSPRGPNLTSSANAPPPP------AH 523
P +P S+PS +P HG L + SP GP++ +A+ PPPP A
Sbjct: 424 PILNPALSQPSQPSSPLPGSHGRNSPGLGSLV---SPHGPHMPPAASIPPPPGLGGVKAS 480
Query: 524 TSTPSVGRISQLEKTLAEL 542
TP + +LEK L +L
Sbjct: 481 AETPRPQPVDKLEKILEKL 499
>gb|AAB96174.1| Cytadherence High Molecular Weight Protein 2 (SwissProt HMW2_MYCPN)
[Mycoplasma pneumoniae M129] gi|2146221|pir||S73852
hypothetical protein MG218 homolog F10_orf1818 -
Mycoplasma pneumoniae (strain ATCC 29342)
gi|1945046|gb|AAB52527.1| cytadherence accessory
gi|13508049|ref|NP_109998.1| Cytadherence High Molecular
Weight Protein 2 (SwissProt HMW2_MYCPN) [Mycoplasma
pneumoniae M129] gi|2498458|sp|P75471|HMW2_MYCPN
Cytadherence high molecular weight protein 2
(Cytadherence accessory protein 2)
Length = 1818
Score = 42.4 bits (98), Expect = 0.050
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 531 RISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAK 590
+++Q +K ++R++ LE + Q+A L+N +++L K+ + L +A + D K
Sbjct: 792 KLNQAKKAFLQIRKQQLLEIASVKQQLAQKANLLKNQQAELDKQTEELEAAFLEQDTDKK 851
Query: 591 ALEEKLRSEDAVAAVSERGRGFFLAK 616
LE+ L S + + ER R F L K
Sbjct: 852 ELEKALHSVKSKQELLERERSFLLQK 877
>gb|EAA50953.1| hypothetical protein MG04712.4 [Magnaporthe grisea 70-15]
gi|39945460|ref|XP_362267.1| hypothetical protein
MG04712.4 [Magnaporthe grisea 70-15]
Length = 581
Score = 42.4 bits (98), Expect = 0.050
Identities = 33/159 (20%), Positives = 64/159 (39%), Gaps = 7/159 (4%)
Query: 457 IQASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLSRPI-----VISSPRGPNL 511
+Q ++P +P+ + P P QH + +P ++ P +L
Sbjct: 344 VQQHAQQPPPHPQSQPTHPQYQQQPPQQ--PQQHQAPPQPVQKPPPPPTDIMDEPLVLSL 401
Query: 512 TSSANAPPPPAHTSTPSVGRISQLEKTLAELRQEAQLESSVKADQIASTEADLENLRSDL 571
S N P PP + ++QL TL +R A+ ++ + + A + S +
Sbjct: 402 PSPTNIPAPPIPPNPERSNLLAQLATTLHAMRVRARTQNESSLSGLQAQRAAMLTALSSM 461
Query: 572 AKKDDLLSSAKTQAHLDAKALEEKLRSEDAVAAVSERGR 610
+ LS+ + +A L + LR D+V A ++ G+
Sbjct: 462 HAEQQSLSAVSSLLSSNASILHDSLRKADSVVADAKAGK 500
>ref|XP_127323.4| PREDICTED: RIKEN cDNA 1810073P09 [Mus musculus]
Length = 2768
Score = 42.4 bits (98), Expect = 0.050
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 23/188 (12%)
Query: 439 LAVSDCSRVIGDKASLLKIQASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLS 498
L S CS +G+ S ++ G+ PL P PSP + G P + G++S
Sbjct: 1906 LEASRCSTGLGEPISTREVSTQGE-PLPASVPEPSPPTGATQSVPGQPPPPLPITVGAIS 1964
Query: 499 RPIVISSPRGPNLTSSANAPPPP-------AHTSTPSVGRISQLEKTLAE-----LRQEA 546
+++P+ P+ APPPP P VG + K+L E L QE
Sbjct: 1965 ----LAAPQLPSPPLGPTAPPPPPSALESDGEGPPPRVGFVDNTIKSLDEKLRTLLYQEH 2020
Query: 547 QLESSVKAD---QIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAKALEEKLRSEDAVA 603
SS A + + + LE LR DL LS + EK + A
Sbjct: 2021 VPTSSASAGTPMEASDRDFTLEPLRGDL---PSALSDKTPSLTQQTQPSLEKSETAPAGW 2077
Query: 604 AVSERGRG 611
A+++R +G
Sbjct: 2078 ALAQREQG 2085
>gb|AAH60187.1| 1810073P09Rik protein [Mus musculus]
Length = 1349
Score = 42.4 bits (98), Expect = 0.050
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 23/188 (12%)
Query: 439 LAVSDCSRVIGDKASLLKIQASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLS 498
L S CS +G+ S ++ G+ PL P PSP + G P + G++S
Sbjct: 606 LEASRCSTGLGEPISTREVSTQGE-PLPASVPEPSPPTGATQSVPGQPPPPLPITVGAIS 664
Query: 499 RPIVISSPRGPNLTSSANAPPPP-------AHTSTPSVGRISQLEKTLAE-----LRQEA 546
+++P+ P+ APPPP P VG + K+L E L QE
Sbjct: 665 ----LAAPQLPSPPLGPTAPPPPPSALESDGEGPPPRVGFVDNTIKSLDEKLRTLLYQEH 720
Query: 547 QLESSVKAD---QIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAKALEEKLRSEDAVA 603
SS A + + + LE LR DL LS + EK + A
Sbjct: 721 VPTSSASAGTPMEASDRDFTLEPLRGDL---PSALSDKTPSLTQQTQPSLEKSETAPAGW 777
Query: 604 AVSERGRG 611
A+++R +G
Sbjct: 778 ALAQREQG 785
>gb|AAH46464.1| 1810073P09Rik protein [Mus musculus]
Length = 1557
Score = 42.4 bits (98), Expect = 0.050
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 23/188 (12%)
Query: 439 LAVSDCSRVIGDKASLLKIQASGKRPLGEEDPRPSPKRLNSSEPSGTIPAQHGLVDGSLS 498
L S CS +G+ S ++ G+ PL P PSP + G P + G++S
Sbjct: 862 LEASRCSTGLGEPISTREVSTQGE-PLPASVPEPSPPTGATQSVPGQPPPPLPITVGAIS 920
Query: 499 RPIVISSPRGPNLTSSANAPPPP-------AHTSTPSVGRISQLEKTLAE-----LRQEA 546
+++P+ P+ APPPP P VG + K+L E L QE
Sbjct: 921 ----LAAPQLPSPPLGPTAPPPPPSALESDGEGPPPRVGFVDNTIKSLDEKLRTLLYQEH 976
Query: 547 QLESSVKAD---QIASTEADLENLRSDLAKKDDLLSSAKTQAHLDAKALEEKLRSEDAVA 603
SS A + + + LE LR DL LS + EK + A
Sbjct: 977 VPTSSASAGTPMEASDRDFTLEPLRGDL---PSALSDKTPSLTQQTQPSLEKSETAPAGW 1033
Query: 604 AVSERGRG 611
A+++R +G
Sbjct: 1034 ALAQREQG 1041
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,239,589,141
Number of Sequences: 2540612
Number of extensions: 57266757
Number of successful extensions: 202731
Number of sequences better than 10.0: 280
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 202222
Number of HSP's gapped (non-prelim): 709
length of query: 681
length of database: 863,360,394
effective HSP length: 135
effective length of query: 546
effective length of database: 520,377,774
effective search space: 284126264604
effective search space used: 284126264604
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)
Lotus: description of TM0103.2