BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0103.10
(418 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_910569.1| Similar to Zea mays putative AC9 transposase. (... 47 0.001
dbj|BAD44809.1| hypothetical protein [Oryza sativa (japonica cul... 47 0.001
ref|NP_910568.1| Similar to Arabidopsis thaliana chromosome II B... 45 0.005
ref|XP_474015.1| OSJNBa0043L09.11 [Oryza sativa (japonica cultiv... 42 0.035
emb|CAE03318.2| OSJNBa0032I19.12 [Oryza sativa (japonica cultiva... 42 0.035
gb|AAX96628.1| retrotransposon protein, putative, Ty3-gypsy sub-... 42 0.046
ref|NP_609227.1| CG13398-PA [Drosophila melanogaster] gi|7297414... 41 0.060
gb|AAM48392.1| RE08678p [Drosophila melanogaster] 41 0.060
emb|CAC22615.1| hypothetical protein L4830.13 [Leishmania major] 40 0.13
ref|XP_470676.1| hypothetical protein [Oryza sativa (japonica cu... 39 0.23
gb|AAV32122.1| putative heavy chain myosin [Oryza sativa (japoni... 39 0.23
gb|AAO86635.1| phantastica transcription factor [Fraxinus americ... 39 0.30
gb|AAH91303.1| Signal-induced proliferation-associated 1 like 3 ... 39 0.30
dbj|BAB71645.1| unnamed protein product [Homo sapiens] 39 0.30
ref|NP_848547.2| leucine rich repeat containing 50 [Homo sapiens... 39 0.30
emb|CAH10394.1| hypothetical protein [Homo sapiens] 39 0.30
emb|CAH10390.1| hypothetical protein [Homo sapiens] 39 0.30
gb|EAA55182.1| hypothetical protein MG06839.4 [Magnaporthe grise... 39 0.39
ref|NP_083094.1| RIKEN cDNA 2610511M17 [Mus musculus] gi|2635276... 38 0.51
ref|XP_474259.1| OSJNBa0087O24.17 [Oryza sativa (japonica cultiv... 38 0.51
>ref|NP_910569.1| Similar to Zea mays putative AC9 transposase. (P03010) [Oryza
sativa (japonica cultivar-group)]
Length = 947
Score = 47.0 bits (110), Expect = 0.001
Identities = 26/75 (34%), Positives = 36/75 (47%), Gaps = 4/75 (5%)
Query: 56 IKFPFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILC---DAIHQEPEPSTFFYFYRVS 112
++ P PF +VL + +APSQL PN+W L F LC P P T F + +
Sbjct: 98 MRLPLQPFFAAVLAHFGLAPSQLTPNAWRLLAGFAALCRRAGVAPPPPPPLTVFRHFFTA 157
Query: 113 VQPSPQRSWVSLEAR 127
+ P +W S AR
Sbjct: 158 I-GCPPGAWYSFRAR 171
>dbj|BAD44809.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 569
Score = 47.0 bits (110), Expect = 0.001
Identities = 26/75 (34%), Positives = 36/75 (47%), Gaps = 4/75 (5%)
Query: 56 IKFPFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILC---DAIHQEPEPSTFFYFYRVS 112
++ P PF +VL + +APSQL PN+W L F LC P P T F + +
Sbjct: 98 MRLPLQPFFAAVLAHFGLAPSQLTPNAWRLLAGFAALCRRAGVAPPPPPPLTVFRHFFTA 157
Query: 113 VQPSPQRSWVSLEAR 127
+ P +W S AR
Sbjct: 158 I-GCPPGAWYSFRAR 171
>ref|NP_910568.1| Similar to Arabidopsis thaliana chromosome II BAC F13B15 genomic
sequence, putative non-LTR retroelement reverse
transcriptase. (AC006300) [Oryza sativa (japonica
cultivar-group)]
Length = 1285
Score = 44.7 bits (104), Expect = 0.005
Identities = 22/74 (29%), Positives = 35/74 (46%), Gaps = 2/74 (2%)
Query: 56 IKFPFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDAIHQEPEPSTFFYFYRVSVQP 115
++ P PF C +L ++ VAPSQ+ PN W + F +L P + F F+R+ +
Sbjct: 309 MRLPLHPFACELLRHLGVAPSQITPNGWRVVAGFLLLSHHAAAPPSLAVFRRFFRLFL-- 366
Query: 116 SPQRSWVSLEARPG 129
S W + G
Sbjct: 367 SKLNGWYHFRGKRG 380
>ref|XP_474015.1| OSJNBa0043L09.11 [Oryza sativa (japonica cultivar-group)]
gi|38344791|emb|CAE02992.2| OSJNBa0043L09.11 [Oryza
sativa (japonica cultivar-group)]
Length = 780
Score = 42.0 bits (97), Expect = 0.035
Identities = 45/175 (25%), Positives = 78/175 (43%), Gaps = 16/175 (9%)
Query: 59 PFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDA-IHQEPEPSTFFYFYRVS-VQPS 116
P S F+ V++ ++ L+PNS AFL F LC+A I EP F ++Y + ++P+
Sbjct: 58 PPSEFLLLVMNFYGLSLLHLNPNSIAFLSIFSHLCEAYIGVEPFLDLFRFYYELRWMEPN 117
Query: 117 PQRSWVSLEARPG-RQRFNPI-WPSITIALAHKFFRVVVSHVYPEVFTHRDGTARFPFYW 174
V R G + R+ P PS ++F + + P + + P W
Sbjct: 118 RVSGCVGFRLRDGLKSRYIPFQCPSSRSKWWTRWFYLQIKDSDPVFVVPEEQPDKIP-SW 176
Query: 175 TQGARQIIDPSEDSLTPEHKAVIDFLARLAVSDCSRVIGQTHRADEELLAAFEKK 229
T ++ LTP ++ ID + L + +IG AD ++ A+ ++K
Sbjct: 177 T---------AKPPLTPSLQSFIDIVDDLRALPLTDIIGPL--ADHQVTASLKEK 220
>emb|CAE03318.2| OSJNBa0032I19.12 [Oryza sativa (japonica cultivar-group)]
gi|38345106|emb|CAD40485.2| OSJNBa0067G20.1 [Oryza
sativa (japonica cultivar-group)]
gi|50923185|ref|XP_471953.1| OSJNBa0032I19.12 [Oryza
sativa (japonica cultivar-group)]
Length = 608
Score = 42.0 bits (97), Expect = 0.035
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 52/259 (20%)
Query: 59 PFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDA-IHQEPEPSTFFYFYRVS-VQPS 116
P S F+ VL+ ++ L+PNS AFL F LC+A I EP F ++Y + ++P+
Sbjct: 31 PPSEFLLLVLNFYGLSLLHLNPNSIAFLSIFSHLCEAYIGVEPFLDLFRFYYELRWMEPN 90
Query: 117 PQRSWVSLEARPG-RQRFNPI-WPSITIALAHKFFRVVVSHVYPEVFTHRDGTARFPFYW 174
V R G + R+ P PS ++F + + P + + P W
Sbjct: 91 RVSGCVGFRLRDGLKSRYIPFQCPSSRSKWRTRWFYLQIKDSDPVFIVPTEQPDKIP-SW 149
Query: 175 TQGARQIIDPSEDSLTPEHKAVIDFLARLAVSDCSRVIGQTHRADEELLAAFEKKNNVSF 234
T ++ LTP ++ ID + L V SR E+ A F ++
Sbjct: 150 T---------AKPPLTPSLQSFIDIVDDLRVRGLSRY---------EVTADFVRRRIQPL 191
Query: 235 PPRINLKGDKASLLRIQAGRKRPLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPT 294
R++ D + E+ R SP+ LN S T+ + G V
Sbjct: 192 QARVHPAFDYSG------------PEDATRVSPQGLN----SETVGRRVGQV-------- 227
Query: 295 VISSPLGPNLTSSANAPPP 313
+ISSP T+++N P P
Sbjct: 228 MISSP-----TTASNIPVP 241
>gb|AAX96628.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 546
Score = 41.6 bits (96), Expect = 0.046
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 44 FYVYGYMFPNLKIKFPFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDA-IHQEPEP 102
+ +YG++ P S F+ VL+ ++ L+PNS AFL F LC+A I EP
Sbjct: 161 YILYGFLPPP-------SEFLLLVLNFYGLSLLHLNPNSIAFLSIFSYLCEAYIGVEPFL 213
Query: 103 STFFYFYRVS-VQPSPQRSWVSLEARPG-RQRFNPI-WPSITIALAHKFFRVVVSHVYPE 159
F ++Y + ++P V R G + R+ P PS ++F + + + P
Sbjct: 214 DLFRFYYELRWMEPKKVSGCVGFRLRDGMKSRYIPFQCPSSRSKWRGRWFYLQIENSDPV 273
Query: 160 VFTHRDGTARFPFYWTQGARQIIDPSEDSLTPEHKAVIDFLARLAV 205
+ + P WT ++ +LTP ++ ID + L V
Sbjct: 274 FIVPEEQPDKIP-EWT---------TKPALTPSLQSFIDVIDDLRV 309
>ref|NP_609227.1| CG13398-PA [Drosophila melanogaster] gi|7297414|gb|AAF52673.1|
CG13398-PA [Drosophila melanogaster]
Length = 442
Score = 41.2 bits (95), Expect = 0.060
Identities = 30/112 (26%), Positives = 54/112 (47%), Gaps = 9/112 (8%)
Query: 275 PSGTIPAQHGLVDGS--LSRPTVISSPLGPNLTSSANAPPPPVHTSTLSSGSVSRGFSCS 332
P+G+ A +G G +S P +++P+ P ++ + PPPP+ T +L+S S G + +
Sbjct: 319 PAGSSKAINGFGSGLSLISTPAAVTAPVTPEAGTTLDVPPPPMQTQSLNSISADTGDTQA 378
Query: 333 LTLT---SAQMARMDEVVKQRGLDNISEGAVARVLHAFHCYRRSAQDADKLR 381
+T Q + ++ L+ S V H H S+ DA++LR
Sbjct: 379 KKVTECSGTQGYSTIDFIRTYALNKSSTELPETVTHRQH----SSHDAEELR 426
>gb|AAM48392.1| RE08678p [Drosophila melanogaster]
Length = 442
Score = 41.2 bits (95), Expect = 0.060
Identities = 30/112 (26%), Positives = 54/112 (47%), Gaps = 9/112 (8%)
Query: 275 PSGTIPAQHGLVDGS--LSRPTVISSPLGPNLTSSANAPPPPVHTSTLSSGSVSRGFSCS 332
P+G+ A +G G +S P +++P+ P ++ + PPPP+ T +L+S S G + +
Sbjct: 319 PAGSSKAINGFGSGLSLISTPAAVTAPVTPEAGTTLDVPPPPMQTQSLNSISADTGDTQA 378
Query: 333 LTLT---SAQMARMDEVVKQRGLDNISEGAVARVLHAFHCYRRSAQDADKLR 381
+T Q + ++ L+ S V H H S+ DA++LR
Sbjct: 379 KKVTECSGTQGYSTIDFIRTYALNKSSTELPETVTHRQH----SSHDAEELR 426
>emb|CAC22615.1| hypothetical protein L4830.13 [Leishmania major]
Length = 794
Score = 40.0 bits (92), Expect = 0.13
Identities = 50/189 (26%), Positives = 80/189 (41%), Gaps = 18/189 (9%)
Query: 238 INLKGDKASLLRIQAGRKRPLGEEDPRPSPKRLNSGEPSGTIPA--QHG-LVDGSLSRPT 294
+ L DK + G L E PR P+R N GE G A +H + G+ P+
Sbjct: 69 VPLSNDKDLCASLGIGNGATLSVE-PRHPPRRCNGGEGDGDGGAWQRHSPRMRGARGTPS 127
Query: 295 VISSPLGPNLTSSANAPPPPVHTSTLSSGSVSRGFSCSLTLTSA-QMARMDEVVKQRGLD 353
+ + + SS+ +PP P+ S R TL A +M R D+ V+ L
Sbjct: 128 PVGAAAAGSPASSSLSPPFPM--------SRQRRLLELQTLQQADEMLRKDDAVRDDVLR 179
Query: 354 NISEGAVARVLHA-FHCYRRSAQDADKLRSEVVRLRALNSQLAEDRE---VLAAQLIAKD 409
+ + HA HC R+ + + E+ R++ ++ A +RE VL AQ A+
Sbjct: 180 HTMHHVEEEMDHANLHC-RQLQRQRESAEEELHRMKEKEAEAARERERLAVLRAQEAARA 238
Query: 410 NSFSKELAE 418
+ +L E
Sbjct: 239 TERAAQLVE 247
>ref|XP_470676.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|28927678|gb|AAO62324.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 799
Score = 39.3 bits (90), Expect = 0.23
Identities = 44/155 (28%), Positives = 67/155 (42%), Gaps = 14/155 (9%)
Query: 59 PFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDA-IHQEPEPSTFFYFYRVSVQPSP 117
P S F+ VL+ ++ L+PNS AFL F LC+A I EP F ++Y + S
Sbjct: 58 PPSEFLLLVLNFYGLSLLHLNPNSIAFLSIFVHLCEAYIGVEPFLDLFRFYYELRWMESN 117
Query: 118 QRS-WVSLEARPG-RQRFNPI-WPSITIALAHKFFRVVVSHVYPEVFTHRDGTARFPFYW 174
+ S V R G + R+ P PS +++F + + P D + P W
Sbjct: 118 RVSGCVGFRLRDGLKSRYIPFQCPSSRSKWRNRWFYLEIKDSNPVFVVPEDQPNKIP-SW 176
Query: 175 TQGARQIIDPSEDSLTPEHKAVIDFLARLAVSDCS 209
T ++ LTP ++ ID + L V S
Sbjct: 177 T---------AKPPLTPSLQSFIDIIDDLRVRGLS 202
>gb|AAV32122.1| putative heavy chain myosin [Oryza sativa (japonica
cultivar-group)]
Length = 553
Score = 39.3 bits (90), Expect = 0.23
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 59 PFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDA-IHQEPEPSTFFYFYRVS-VQPS 116
P S F+ VL+ ++ L+PNS AFL F LC+A I EP F ++Y + ++P
Sbjct: 58 PPSEFLLLVLNFYGLSLLHLNPNSIAFLSIFSCLCEAYIGVEPFVDLFRFYYELRWMEPK 117
Query: 117 PQRSWVSLEARPG-RQRFNPI-WPSITIALAHKFFRVVVSHVYPEVFTHRDGTARFPFYW 174
V + G + RF P PS ++F + + + P VF + W
Sbjct: 118 KVSGCVGFRLQDGLKSRFIPFQCPSSRSKWRARWFYLQIENSDP-VFVVPEEQPDKISEW 176
Query: 175 TQGARQIIDPSEDSLTPEHKAVIDFLARLAVSDCS 209
T ++ +LTP ++ ID + L + S
Sbjct: 177 T---------AKPALTPSFQSFIDIIDDLRIRGLS 202
>gb|AAO86635.1| phantastica transcription factor [Fraxinus americana]
Length = 233
Score = 38.9 bits (89), Expect = 0.30
Identities = 23/78 (29%), Positives = 39/78 (49%)
Query: 275 PSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPPPVHTSTLSSGSVSRGFSCSLT 334
P+ +P H ++ SRP +S P+ P ++ P +S SS S + S SLT
Sbjct: 96 PNLPLPEPHPVLSIGSSRPVQLSGPILPPWMNNTTHPHTQTSSSLTSSSSSTHSPSVSLT 155
Query: 335 LTSAQMARMDEVVKQRGL 352
L+ ++ A +D + + GL
Sbjct: 156 LSPSEPAVLDPIHPEPGL 173
>gb|AAH91303.1| Signal-induced proliferation-associated 1 like 3 (predicted)
[Rattus norvegicus] gi|61556847|ref|NP_001013084.1|
signal-induced proliferation-associated 1 like 3
(predicted) [Rattus norvegicus]
Length = 584
Score = 38.9 bits (89), Expect = 0.30
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Query: 245 ASLLRIQAGRKRPLGEEDP--RPSPKRLNSGEPSGTIPAQHGL-VDGSLSRPTVISSPLG 301
AS L + GR RPL DP P P E S + A V ++S ++ L
Sbjct: 421 ASELSLADGRDRPLRRLDPGMMPLPDTAAGLEWSSLVNAAKAYEVQRAVSLFSLNDPALS 480
Query: 302 PNLTSSANAPPPPVHTSTLSSGSVSRGFSCSLTL-TSAQMARMDEVVKQRGLDNISEGAV 360
P++ PP H+ S S+ RG T T ++ + +D K L+ +
Sbjct: 481 PDI--------PPAHSPVHSHLSLERGPQTPRTTPTMSEESPLDLTGKVYQLE-----VM 527
Query: 361 ARVLHAFHCYRRSAQDADKLRSEVVRLRALNSQLAEDREVLAAQLIAKDNSFSKELAE 418
+ LH ++ QD L+SEV LR N +L E+ + + QL FS+E E
Sbjct: 528 LKQLHTD--LQKEKQDKVVLQSEVASLRQNNQRLQEESQAASEQLRKFAELFSREKKE 583
>dbj|BAB71645.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 38.9 bits (89), Expect = 0.30
Identities = 25/63 (39%), Positives = 31/63 (48%), Gaps = 7/63 (11%)
Query: 255 KRPLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLG---PNLTSSANAP 311
+RP GEE P + + EP GT+PA+ L LS P + G P T A AP
Sbjct: 191 ERPSGEEPPVEAKREDGGPEPEGTLPAETLL----LSSPVEVKGEDGDGEPEGTLPAEAP 246
Query: 312 PPP 314
PPP
Sbjct: 247 PPP 249
>ref|NP_848547.2| leucine rich repeat containing 50 [Homo sapiens]
gi|34193678|gb|AAH24009.2| LRRC50 protein [Homo sapiens]
Length = 638
Score = 38.9 bits (89), Expect = 0.30
Identities = 25/63 (39%), Positives = 31/63 (48%), Gaps = 7/63 (11%)
Query: 255 KRPLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLG---PNLTSSANAP 311
+RP GEE P + + EP GT+PA+ L LS P + G P T A AP
Sbjct: 305 ERPSGEEPPVEAKREDGGPEPEGTLPAETLL----LSSPVEVKGEDGDGEPEGTLPAEAP 360
Query: 312 PPP 314
PPP
Sbjct: 361 PPP 363
>emb|CAH10394.1| hypothetical protein [Homo sapiens]
Length = 548
Score = 38.9 bits (89), Expect = 0.30
Identities = 25/63 (39%), Positives = 31/63 (48%), Gaps = 7/63 (11%)
Query: 255 KRPLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLG---PNLTSSANAP 311
+RP GEE P + + EP GT+PA+ L LS P + G P T A AP
Sbjct: 392 ERPSGEEPPVEAKREDGGPEPEGTLPAETLL----LSSPVEVKGEDGDGEPEGTLPAEAP 447
Query: 312 PPP 314
PPP
Sbjct: 448 PPP 450
>emb|CAH10390.1| hypothetical protein [Homo sapiens]
Length = 548
Score = 38.9 bits (89), Expect = 0.30
Identities = 25/63 (39%), Positives = 31/63 (48%), Gaps = 7/63 (11%)
Query: 255 KRPLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLG---PNLTSSANAP 311
+RP GEE P + + EP GT+PA+ L LS P + G P T A AP
Sbjct: 392 ERPSGEEPPVEAKREDGGPEPEGTLPAETLL----LSSPVEVKGEDGDGEPEGTLPAEAP 447
Query: 312 PPP 314
PPP
Sbjct: 448 PPP 450
>gb|EAA55182.1| hypothetical protein MG06839.4 [Magnaporthe grisea 70-15]
gi|39977909|ref|XP_370342.1| hypothetical protein
MG06839.4 [Magnaporthe grisea 70-15]
Length = 1076
Score = 38.5 bits (88), Expect = 0.39
Identities = 26/69 (37%), Positives = 39/69 (55%), Gaps = 3/69 (4%)
Query: 261 EDPRPSPKR-LNSGEPSGTI-PAQHGLVDGSLSR-PTVISSPLGPNLTSSANAPPPPVHT 317
+ RPSP R L++G+ S + P +G+ S+ R P++++ L+SS NA PPP
Sbjct: 835 DSDRPSPLRSLDAGKASNMLSPPPYGMRKSSIPRSPSLLALDENTPLSSSLNARPPPSKV 894
Query: 318 STLSSGSVS 326
SSGS S
Sbjct: 895 EASSSGSES 903
>ref|NP_083094.1| RIKEN cDNA 2610511M17 [Mus musculus] gi|26352766|dbj|BAC40013.1|
unnamed protein product [Mus musculus]
gi|26336254|dbj|BAC31812.1| unnamed protein product [Mus
musculus]
Length = 589
Score = 38.1 bits (87), Expect = 0.51
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 245 ASLLRIQAGRKRPLGEEDP--RPSPKRLNSGEPSGTIPAQHGL-VDGSLSRPTVISSPLG 301
AS L + GR RPL DP P P E S + A V ++S ++ L
Sbjct: 426 ASELSLADGRDRPLRRLDPGMMPLPDTAAGLEWSSLVNAAKAYEVQRAVSLFSLNDPALS 485
Query: 302 PNLTSSANAPPPPVHTSTLSSGSVSRGFSCS-LTLTSAQMARMDEVVKQRGLDNISEGAV 360
P + PP H+ S S+ RG T T ++ + +D K L+ +
Sbjct: 486 PEI--------PPAHSPVHSHLSLERGPQTPRATPTMSEESPLDLTGKVYQLE-----VM 532
Query: 361 ARVLHAFHCYRRSAQDADKLRSEVVRLRALNSQLAEDREVLAAQLIAKDNSFSKELAE 418
+ LH ++ QD L+SEV LR N +L E+ + + QL FS+E E
Sbjct: 533 LKQLHTD--LQKEKQDKVVLQSEVASLRQNNQRLQEESQAASEQLRKFAELFSREKKE 588
>ref|XP_474259.1| OSJNBa0087O24.17 [Oryza sativa (japonica cultivar-group)]
gi|32488667|emb|CAE03594.1| OSJNBa0087O24.17 [Oryza
sativa (japonica cultivar-group)]
Length = 789
Score = 38.1 bits (87), Expect = 0.51
Identities = 41/154 (26%), Positives = 67/154 (42%), Gaps = 13/154 (8%)
Query: 59 PFSPFICSVLHNINVAPSQLHPNSWAFLRCFEILCDA-IHQEPEPSTFFYFYRVS-VQPS 116
P S F+ VL+ ++ L PNS AFL F LC+A I EP + F ++Y + ++P+
Sbjct: 58 PPSEFLLLVLNFYGLSLLHLSPNSIAFLSIFSHLCEAYIGVEPFLNLFHFYYELRWMEPN 117
Query: 117 PQRSWVSLEARPG-RQRFNPIWPSITIALAHKFFRVVVSHVYPEVFTHRDGTARFPFYWT 175
R G + R+ P ++F + + ++ P VF + WT
Sbjct: 118 RASGCAGFRLRDGLKSRYIPFQCPSHSKWRARWFYLQIENLDP-VFVVPEEQPDKISSWT 176
Query: 176 QGARQIIDPSEDSLTPEHKAVIDFLARLAVSDCS 209
++ +LTP +A ID + L V S
Sbjct: 177 ---------AKPALTPSLQAFIDIIDDLRVRGLS 201
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 751,799,762
Number of Sequences: 2540612
Number of extensions: 34696748
Number of successful extensions: 100555
Number of sequences better than 10.0: 160
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 100433
Number of HSP's gapped (non-prelim): 229
length of query: 418
length of database: 863,360,394
effective HSP length: 131
effective length of query: 287
effective length of database: 530,540,222
effective search space: 152265043714
effective search space used: 152265043714
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0103.10