BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0098c.1
(78 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO92261.1| alpha-L-arabinofuranosidase [Arabidopsis thaliana] 91 8e-18
gb|AAF19575.1| putative alpha-L-arabinofuranosidase [Arabidopsis... 91 8e-18
gb|AAN28883.1| At3g10740/T7M13_18 [Arabidopsis thaliana] gi|1393... 91 8e-18
dbj|BAD95302.1| putative alpha-L-arabinofuranosidase [Arabidopsi... 91 8e-18
dbj|BAD93969.1| putative alpha-L-arabinofuranosidase [Arabidopsi... 91 8e-18
ref|XP_479599.1| putative arabinoxylan narabinofuranohydrolase i... 82 3e-15
gb|AAK21879.1| arabinoxylan arabinofuranohydrolase isoenzyme AXA... 82 5e-15
gb|AAK21880.1| arabinoxylan arabinofuranohydrolase isoenzyme AXA... 80 2e-14
dbj|BAC99303.1| alpha-L-arabinofuranosidase [Pyrus pyrifolia] 78 7e-14
gb|AAO92262.1| alpha-L-arabinofuranosidase [Arabidopsis thaliana... 77 1e-13
gb|AAD40132.1| contains similarity to arabinosidase [Arabidopsis... 77 1e-13
gb|AAP97437.1| alpha-L-arabinofuranosidase [Malus x domestica] 75 4e-13
dbj|BAC99302.1| alpha-L-arabinofuranosidase [Lycopersicon escule... 69 4e-11
gb|AAL18931.1| arabinosidase ARA-1 [Lycopersicon esculentum] 68 5e-11
dbj|BAD30073.1| arabinofuranosidase [Daucus carota] 64 1e-09
emb|CAD39867.2| OSJNBb0058J09.4 [Oryza sativa (japonica cultivar... 62 3e-09
ref|ZP_00522857.1| Alpha-L-arabinofuranosidase [Solibacter usita... 37 0.099
ref|YP_176865.1| alpha-L-arabinofuranosidase [Bacillus clausii K... 36 0.29
emb|CAA76421.2| alpha-L-arabinofuranosidase [Thermobacillus xyla... 35 0.38
gb|AAO75455.1| alpha-L-arabinofuranosidase [Bacteroides thetaiot... 35 0.64
>gb|AAO92261.1| alpha-L-arabinofuranosidase [Arabidopsis thaliana]
Length = 678
Score = 90.9 bits (224), Expect = 8e-18
Identities = 45/78 (57%), Positives = 59/78 (74%), Gaps = 1/78 (1%)
Query: 2 VNFGSGSESFRISINGLKSKVKQ-SGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
VNFG+ SE+ ++ + GL V + SGS+KTVLT+ NVMDENSFS+P K+VP ++ +E A
Sbjct: 579 VNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAE 638
Query: 61 TDMKVELPPHSVTSFDLL 78
DM V LPPHS +SFDLL
Sbjct: 639 EDMTVVLPPHSFSSFDLL 656
>gb|AAF19575.1| putative alpha-L-arabinofuranosidase [Arabidopsis thaliana]
gi|15228368|ref|NP_187685.1| glycosyl hydrolase family
protein 51 [Arabidopsis thaliana]
Length = 678
Score = 90.9 bits (224), Expect = 8e-18
Identities = 45/78 (57%), Positives = 59/78 (74%), Gaps = 1/78 (1%)
Query: 2 VNFGSGSESFRISINGLKSKVKQ-SGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
VNFG+ SE+ ++ + GL V + SGS+KTVLT+ NVMDENSFS+P K+VP ++ +E A
Sbjct: 579 VNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAE 638
Query: 61 TDMKVELPPHSVTSFDLL 78
DM V LPPHS +SFDLL
Sbjct: 639 EDMTVVLPPHSFSSFDLL 656
>gb|AAN28883.1| At3g10740/T7M13_18 [Arabidopsis thaliana]
gi|13937191|gb|AAK50089.1| AT3g10740/T7M13_18
[Arabidopsis thaliana]
Length = 678
Score = 90.9 bits (224), Expect = 8e-18
Identities = 45/78 (57%), Positives = 59/78 (74%), Gaps = 1/78 (1%)
Query: 2 VNFGSGSESFRISINGLKSKVKQ-SGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
VNFG+ SE+ ++ + GL V + SGS+KTVLT+ NVMDENSFS+P K+VP ++ +E A
Sbjct: 579 VNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAE 638
Query: 61 TDMKVELPPHSVTSFDLL 78
DM V LPPHS +SFDLL
Sbjct: 639 EDMTVVLPPHSFSSFDLL 656
>dbj|BAD95302.1| putative alpha-L-arabinofuranosidase [Arabidopsis thaliana]
Length = 392
Score = 90.9 bits (224), Expect = 8e-18
Identities = 45/78 (57%), Positives = 59/78 (74%), Gaps = 1/78 (1%)
Query: 2 VNFGSGSESFRISINGLKSKVKQ-SGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
VNFG+ SE+ ++ + GL V + SGS+KTVLT+ NVMDENSFS+P K+VP ++ +E A
Sbjct: 293 VNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAE 352
Query: 61 TDMKVELPPHSVTSFDLL 78
DM V LPPHS +SFDLL
Sbjct: 353 EDMTVVLPPHSFSSFDLL 370
>dbj|BAD93969.1| putative alpha-L-arabinofuranosidase [Arabidopsis thaliana]
Length = 280
Score = 90.9 bits (224), Expect = 8e-18
Identities = 45/78 (57%), Positives = 59/78 (74%), Gaps = 1/78 (1%)
Query: 2 VNFGSGSESFRISINGLKSKVKQ-SGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
VNFG+ SE+ ++ + GL V + SGS+KTVLT+ NVMDENSFS+P K+VP ++ +E A
Sbjct: 181 VNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAE 240
Query: 61 TDMKVELPPHSVTSFDLL 78
DM V LPPHS +SFDLL
Sbjct: 241 EDMTVVLPPHSFSSFDLL 258
>ref|XP_479599.1| putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I
[Oryza sativa (japonica cultivar-group)]
gi|50509150|dbj|BAD30290.1| putative arabinoxylan
narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa
(japonica cultivar-group)] gi|22324432|dbj|BAC10349.1|
putative arabinoxylan narabinofuranohydrolase isoenzyme
AXAH-I [Oryza sativa (japonica cultivar-group)]
Length = 664
Score = 82.4 bits (202), Expect = 3e-15
Identities = 37/78 (47%), Positives = 57/78 (72%)
Query: 1 VVNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
+VNFG+ + + IS++GL +K SGS+KTVLT++ +DENSF +P K+ P +P++ A+
Sbjct: 578 LVNFGNQAVNLSISVSGLDEGIKSSGSKKTVLTSSGPLDENSFQQPQKVAPVSSPVDNAN 637
Query: 61 TDMKVELPPHSVTSFDLL 78
M V + P+S+TSFDLL
Sbjct: 638 EQMGVLVDPYSLTSFDLL 655
>gb|AAK21879.1| arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I [Hordeum
vulgare]
Length = 658
Score = 81.6 bits (200), Expect = 5e-15
Identities = 38/77 (49%), Positives = 51/77 (65%)
Query: 1 VVNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
+VNFG + IS GL+ + GS TVLT+ VMDENSF+ PNK+VP + A+
Sbjct: 571 IVNFGPDAVGLTISATGLQGSINAFGSTATVLTSGGVMDENSFANPNKVVPVTVELRDAA 630
Query: 61 TDMKVELPPHSVTSFDL 77
+M+V LPPHS+T+FDL
Sbjct: 631 EEMQVTLPPHSLTAFDL 647
>gb|AAK21880.1| arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Hordeum
vulgare]
Length = 656
Score = 79.7 bits (195), Expect = 2e-14
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 1 VVNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
+VNFGS + S IS++GL++ + GS TVLT++NV DENSFS P K+VP + + A+
Sbjct: 569 IVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAA 628
Query: 61 TDMKVELPPHSVTSFDL 77
M+V L HS +SFDL
Sbjct: 629 EQMQVTLAAHSFSSFDL 645
>dbj|BAC99303.1| alpha-L-arabinofuranosidase [Pyrus pyrifolia]
Length = 674
Score = 77.8 bits (190), Expect = 7e-14
Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 1 VVNFGSGSESFRISINGLK-SKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGA 59
VVN G+ + + ++ ++GL + + SGS KTVLT+ N MDENSF+EP K++P+Q+ +E A
Sbjct: 576 VVNLGTDTVNLKVFVDGLDPNSISLSGSTKTVLTSNNQMDENSFNEPTKVIPKQSLLESA 635
Query: 60 STDMKVELPPHSVTSFDLL 78
S +M+V + P S TS DLL
Sbjct: 636 SEEMEVVISPRSFTSIDLL 654
>gb|AAO92262.1| alpha-L-arabinofuranosidase [Arabidopsis thaliana]
gi|29824173|gb|AAP04047.1| unknown protein [Arabidopsis
thaliana] gi|17380938|gb|AAL36281.1| putative
arabinosidase [Arabidopsis thaliana]
gi|22327075|ref|NP_197984.2| glycosyl hydrolase family
protein 51 [Arabidopsis thaliana]
Length = 674
Score = 76.6 bits (187), Expect = 1e-13
Identities = 41/78 (52%), Positives = 55/78 (69%), Gaps = 3/78 (3%)
Query: 2 VNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIE-GAS 60
VNFG S + ++++ GL +K GS+K VLT+A+VMDENSFS PN IVPQ++ +E
Sbjct: 578 VNFGEQSVNLKVAVTGLMAKFY--GSKKKVLTSASVMDENSFSNPNMIVPQESLLEMTEQ 635
Query: 61 TDMKVELPPHSVTSFDLL 78
D+ LPPHS +SFDLL
Sbjct: 636 EDLMFVLPPHSFSSFDLL 653
>gb|AAD40132.1| contains similarity to arabinosidase [Arabidopsis thaliana]
Length = 521
Score = 76.6 bits (187), Expect = 1e-13
Identities = 41/78 (52%), Positives = 55/78 (69%), Gaps = 3/78 (3%)
Query: 2 VNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIE-GAS 60
VNFG S + ++++ GL +K GS+K VLT+A+VMDENSFS PN IVPQ++ +E
Sbjct: 425 VNFGEQSVNLKVAVTGLMAKFY--GSKKKVLTSASVMDENSFSNPNMIVPQESLLEMTEQ 482
Query: 61 TDMKVELPPHSVTSFDLL 78
D+ LPPHS +SFDLL
Sbjct: 483 EDLMFVLPPHSFSSFDLL 500
>gb|AAP97437.1| alpha-L-arabinofuranosidase [Malus x domestica]
Length = 675
Score = 75.1 bits (183), Expect = 4e-13
Identities = 37/79 (46%), Positives = 57/79 (71%), Gaps = 1/79 (1%)
Query: 1 VVNFGSGSESFRISINGLK-SKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGA 59
VVN G+ + + ++ ++GL+ + V SGS KTVLT+ N MDENSF+EP K++P+++ +E A
Sbjct: 577 VVNLGTYTVNLKVFVDGLEPNSVSLSGSTKTVLTSNNQMDENSFNEPKKVIPKRSLLESA 636
Query: 60 STDMKVELPPHSVTSFDLL 78
+M+V + P S TS DLL
Sbjct: 637 GEEMEVVISPRSFTSIDLL 655
>dbj|BAC99302.1| alpha-L-arabinofuranosidase [Lycopersicon esculentum]
Length = 674
Score = 68.6 bits (166), Expect = 4e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 VVNFGSGSESFRISINGLKSKVKQS--GSRKTVLTAANVMDENSFSEPNKIVPQQTPIEG 58
VVNFG+ + +IS+ GL ++ G+ T LT+ NVMDENSF EPNK++P +T +E
Sbjct: 576 VVNFGATAAITKISLTGLGQSSLETLFGAVMTELTSNNVMDENSFREPNKVIPVKTQVEK 635
Query: 59 ASTDMKVELPPHSVTSFDLL 78
S +M V L P S+ S D L
Sbjct: 636 VSDNMDVVLAPRSLNSIDFL 655
>gb|AAL18931.1| arabinosidase ARA-1 [Lycopersicon esculentum]
Length = 674
Score = 68.2 bits (165), Expect = 5e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 VVNFGSGSESFRISINGLKSKVKQS--GSRKTVLTAANVMDENSFSEPNKIVPQQTPIEG 58
VVNFG+ + +IS+ GL ++ G+ T LT+ NVMDENSF EPNK++P +T +E
Sbjct: 576 VVNFGTTAVITKISLTGLGQNSLETLFGAVMTELTSNNVMDENSFREPNKVIPVKTQVEK 635
Query: 59 ASTDMKVELPPHSVTSFDLL 78
S +M V L P S+ S D L
Sbjct: 636 VSDNMDVVLAPRSLNSIDFL 655
>dbj|BAD30073.1| arabinofuranosidase [Daucus carota]
Length = 654
Score = 63.5 bits (153), Expect = 1e-09
Identities = 38/81 (46%), Positives = 50/81 (60%), Gaps = 6/81 (7%)
Query: 2 VNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTP----IE 57
VN GS S +ISI+G+K K + S TVLT+ NVMDENSF +P K+ P + P +E
Sbjct: 574 VNIGSVPVSMKISIDGVKINTKSALS--TVLTSDNVMDENSFDKPAKVTPVRAPLTANVE 631
Query: 58 GASTDMKVELPPHSVTSFDLL 78
T+M L HS+TS D+L
Sbjct: 632 LDGTEMTFTLAQHSLTSIDVL 652
>emb|CAD39867.2| OSJNBb0058J09.4 [Oryza sativa (japonica cultivar-group)]
gi|50922309|ref|XP_471515.1| OSJNBb0058J09.4 [Oryza
sativa (japonica cultivar-group)]
Length = 654
Score = 62.4 bits (150), Expect = 3e-09
Identities = 32/77 (41%), Positives = 45/77 (57%)
Query: 1 VVNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGAS 60
+VN GS + +S GL++ V S T+LT+ N+ DENSFS+P +VP + A
Sbjct: 569 IVNIGSNPVNLIVSTTGLEALVNMRKSTITILTSKNLSDENSFSKPTNVVPVTRELPNAG 628
Query: 61 TDMKVELPPHSVTSFDL 77
+M L P+S TSFDL
Sbjct: 629 EEMFAFLGPYSFTSFDL 645
>ref|ZP_00522857.1| Alpha-L-arabinofuranosidase [Solibacter usitatus Ellin6076]
gi|67863188|gb|EAM58202.1| Alpha-L-arabinofuranosidase
[Solibacter usitatus Ellin6076]
Length = 517
Score = 37.4 bits (85), Expect = 0.099
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 13 ISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGASTDMKVELPPHSV 72
I++N S +G+ VL ++ N+F++PN++VP+ + + VELPP SV
Sbjct: 450 INVNCSLSGATPAGATGRVLQDNDLNAANTFTDPNRVVPKPLKVTAQGGTVTVELPPLSV 509
Query: 73 TS 74
+
Sbjct: 510 AT 511
>ref|YP_176865.1| alpha-L-arabinofuranosidase [Bacillus clausii KSM-K16]
gi|56911377|dbj|BAD65904.1| alpha-L-arabinofuranosidase
[Bacillus clausii KSM-K16]
Length = 498
Score = 35.8 bits (81), Expect = 0.29
Identities = 17/64 (26%), Positives = 34/64 (52%), Gaps = 1/64 (1%)
Query: 10 SFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVP-QQTPIEGASTDMKVELP 68
S + + G++ + + +LTA + N+F +PNK+ P P + ++K+++P
Sbjct: 428 SLALKLEGIEKPLSAANVSGELLTANELNAHNTFEQPNKVEPVAYGPTSVSGQELKLDVP 487
Query: 69 PHSV 72
P SV
Sbjct: 488 PSSV 491
>emb|CAA76421.2| alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
Length = 496
Score = 35.4 bits (80), Expect = 0.38
Identities = 25/79 (31%), Positives = 40/79 (49%), Gaps = 9/79 (11%)
Query: 2 VNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVP---QQTPIEG 58
++F +G+ S I + GL V +G T LT+ + N+F EP ++ P + +EG
Sbjct: 421 LDFETGA-SVDIELRGLNGGVSATG---TTLTSGRIDGHNTFDEPERVKPAPFRDFKLEG 476
Query: 59 ASTDMKVELPPHSVTSFDL 77
+ LPP SVT +L
Sbjct: 477 G--HLNASLPPMSVTVLEL 493
>gb|AAO75455.1| alpha-L-arabinofuranosidase [Bacteroides thetaiotaomicron VPI-5482]
gi|29345758|ref|NP_809261.1| alpha-L-arabinofuranosidase
[Bacteroides thetaiotaomicron VPI-5482]
Length = 514
Score = 34.7 bits (78), Expect = 0.64
Identities = 18/48 (37%), Positives = 29/48 (59%), Gaps = 1/48 (2%)
Query: 31 VLTAANVMDENSFSEPNKIVPQQ-TPIEGASTDMKVELPPHSVTSFDL 77
+LT+AN+ D NSF +PN + P ++ MKV+LP S+ + +L
Sbjct: 466 ILTSANLTDYNSFEKPNIVKPASFKEVKINKGIMKVKLPAKSIVTLEL 513
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.308 0.126 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,121,104
Number of Sequences: 2540612
Number of extensions: 3461547
Number of successful extensions: 7936
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7909
Number of HSP's gapped (non-prelim): 31
length of query: 78
length of database: 863,360,394
effective HSP length: 54
effective length of query: 24
effective length of database: 726,167,346
effective search space: 17428016304
effective search space used: 17428016304
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0098c.1