BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0096b.1
(137 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prf||1909359A ribosomal protein S19 244 4e-64
gb|AAM63481.1| putative ribosomal protein s19 or s24 [Arabidopsi... 242 1e-63
gb|AAM63791.1| 40S ribosomal protein S19-like [Arabidopsis thali... 238 2e-62
gb|AAL66893.1| unknown protein [Arabidopsis thaliana] gi|1524112... 236 7e-62
dbj|BAD53549.1| putative 40S ribosomal protein S24 [Oryza sativa... 229 1e-59
ref|XP_464768.1| putative 40S ribosomal protein S24 [Oryza sativ... 228 2e-59
ref|NP_916712.1| putative 40S ribosomal protein S24 [Oryza sativ... 227 4e-59
gb|AAG23693.1| 40S ribosomal protein S24 [Zea mays] 223 8e-58
emb|CAB64902.1| 40S ribosomal protein S19 [Cyanophora paradoxa] 183 7e-46
ref|XP_623734.1| PREDICTED: similar to ribosomal protein S24 [Ap... 171 3e-42
ref|XP_392330.1| PREDICTED: similar to ribosomal protein S24 [Ap... 171 4e-42
gb|AAK92192.1| ribosomal protein S24 [Spodoptera frugiperda] gi|... 171 5e-42
gb|AAH58140.1| Rps24 protein [Rattus norvegicus] gi|46519160|ref... 170 8e-42
gb|AAV34881.1| ribosomal protein S24 [Bombyx mori] gi|46394422|g... 170 8e-42
ref|NP_001016625.1| hypothetical protein LOC549379 [Xenopus trop... 170 8e-42
dbj|BAB26046.1| unnamed protein product [Mus musculus] 170 8e-42
dbj|BAB25640.1| unnamed protein product [Mus musculus] gi|128325... 170 8e-42
dbj|BAB22498.1| unnamed protein product [Mus musculus] 170 8e-42
ref|NP_001012316.1| ribosomal protein S24 isoform 1 [Danio rerio... 169 1e-41
emb|CAA24704.1| ribsomal protein S19 [Xenopus laevis] gi|71037|p... 169 2e-41
>prf||1909359A ribosomal protein S19
Length = 133
Score = 244 bits (622), Expect = 4e-64
Identities = 119/132 (90%), Positives = 127/132 (96%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MADKAVTIRTRKFMTNRLL+RKQFI+DVLHPGRANVSKAELKEKLAR+Y+VKD N +FVF
Sbjct: 1 MADKAVTIRTRKFMTNRLLARKQFIIDVLHPGRANVSKAELKEKLARMYEVKDTNAIFVF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKSTGFGLIYDS+ENAKKYEPKYRLIRNGLDTKVEKSRKQ+KERKNRAKK+R
Sbjct: 61 KFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKVR 120
Query: 121 GVKKTKAADAAK 132
GVKK KA DA K
Sbjct: 121 GVKKIKAGDAKK 132
>gb|AAM63481.1| putative ribosomal protein s19 or s24 [Arabidopsis thaliana]
gi|20334888|gb|AAM16200.1| AT3g04920/T9J14_13
[Arabidopsis thaliana] gi|20259968|gb|AAM13331.1|
putative ribosomal protein s19 or s24 [Arabidopsis
thaliana] gi|17065190|gb|AAL32749.1| putative ribosomal
protein [Arabidopsis thaliana]
gi|15215672|gb|AAK91381.1| AT3g04920/T9J14_13
[Arabidopsis thaliana] gi|12322851|gb|AAG51413.1|
putative ribosomal protein s19 or s24; 43956-42880
[Arabidopsis thaliana] gi|15229845|ref|NP_187143.1| 40S
ribosomal protein S24 (RPS24A) [Arabidopsis thaliana]
gi|11134742|sp|Q9SS17|RS24_ARATH 40S ribosomal protein
S24
Length = 133
Score = 242 bits (618), Expect = 1e-63
Identities = 116/132 (87%), Positives = 129/132 (96%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MA+KAVTIRTRKFMTNRLLSRKQF++DVLHPGRANVSKAELKEKLAR+Y+VKDPN +FVF
Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKS+GFGLIYD++E+AKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAADAAK 132
GVKKTKA DA K
Sbjct: 121 GVKKTKAGDAKK 132
>gb|AAM63791.1| 40S ribosomal protein S19-like [Arabidopsis thaliana]
Length = 133
Score = 238 bits (607), Expect = 2e-62
Identities = 113/132 (85%), Positives = 127/132 (95%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MA+KAVTIRTR FMTNRLL+RKQF++DVLHPGRANVSKAELKEKLAR+Y+VKDPN +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKS+G+GLIYD++ENAKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAADAAK 132
GVKKTKA DA K
Sbjct: 121 GVKKTKAGDAKK 132
>gb|AAL66893.1| unknown protein [Arabidopsis thaliana] gi|15241125|ref|NP_198158.1|
40S ribosomal protein S24 (RPS24B) [Arabidopsis
thaliana] gi|14423510|gb|AAK62437.1| Unknown protein
[Arabidopsis thaliana]
Length = 133
Score = 236 bits (603), Expect = 7e-62
Identities = 112/132 (84%), Positives = 126/132 (94%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MA+KAVTIRTR FMTNRLL+RKQF++DVLHPGRANVSKAELKEKLAR+Y+VKDPN +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
KFRTHFGGGKS+G+GLIYD++ENAKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAADAAK 132
GVKKTKA D K
Sbjct: 121 GVKKTKAGDTKK 132
>dbj|BAD53549.1| putative 40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)]
Length = 138
Score = 229 bits (583), Expect = 1e-59
Identities = 115/136 (84%), Positives = 126/136 (92%), Gaps = 3/136 (2%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFK 61
A AVT+RTRKFMTNRLLSRKQF+++VLHPGRANVSKA+LKEKLA+LY+VKD N +FVFK
Sbjct: 6 AAAAVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFK 65
Query: 62 FRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 121
FRTHFGGGKSTGFGLIYD+L+ AKKYEPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRG
Sbjct: 66 FRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125
Query: 122 VKKTKAADAAKAGKKK 137
VKKTKA D AGKKK
Sbjct: 126 VKKTKAGD---AGKKK 138
>ref|XP_464768.1| putative 40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)] gi|49388938|dbj|BAD26158.1| putative
40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)] gi|49388688|dbj|BAD25872.1| putative
40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)]
Length = 138
Score = 228 bits (582), Expect = 2e-59
Identities = 114/133 (85%), Positives = 125/133 (93%), Gaps = 3/133 (2%)
Query: 5 AVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRT 64
AVT+RTRKFMTNRLLSRKQF+++VLHPGRANVSKA+LKEKLA+LY+VKD N +FVFKFRT
Sbjct: 9 AVTLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRT 68
Query: 65 HFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKK 124
HFGGGKSTGFGLIYD+L+ AKKYEPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRGVKK
Sbjct: 69 HFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKK 128
Query: 125 TKAADAAKAGKKK 137
TKA D AGKKK
Sbjct: 129 TKAGD---AGKKK 138
>ref|NP_916712.1| putative 40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)] gi|20160546|dbj|BAB89495.1| putative
ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)] gi|18461244|dbj|BAB84441.1| putative
ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)]
Length = 138
Score = 227 bits (579), Expect = 4e-59
Identities = 114/136 (83%), Positives = 125/136 (91%), Gaps = 3/136 (2%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFK 61
A AVT+RTRKFMTNRLLSRKQF+++V+HPGR NVSKAELKEKLA+LY+VKD N +FVFK
Sbjct: 6 AAAAVTLRTRKFMTNRLLSRKQFVLEVIHPGRPNVSKAELKEKLAKLYEVKDANCIFVFK 65
Query: 62 FRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 121
FRTHFGGGKSTGFGLIYD+L+ AKKYEPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRG
Sbjct: 66 FRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125
Query: 122 VKKTKAADAAKAGKKK 137
VKKTKA D AGKKK
Sbjct: 126 VKKTKAGD---AGKKK 138
>gb|AAG23693.1| 40S ribosomal protein S24 [Zea mays]
Length = 137
Score = 223 bits (568), Expect = 8e-58
Identities = 108/131 (82%), Positives = 122/131 (92%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFK 61
A AVT KFMTNRLL+RKQF+++V+HPGRANVSKAELKE+LA++Y+VKDPNT+FVFK
Sbjct: 6 ATSAVTSALGKFMTNRLLARKQFVLEVIHPGRANVSKAELKERLAKMYEVKDPNTIFVFK 65
Query: 62 FRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 121
FRTHFGGGKSTGFGLIYD+LE+AKK+EPKYRLIRNGL TKVEKSRKQ+KERKNRAKKIRG
Sbjct: 66 FRTHFGGGKSTGFGLIYDNLESAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125
Query: 122 VKKTKAADAAK 132
VKKTKA DA K
Sbjct: 126 VKKTKAGDAKK 136
>emb|CAB64902.1| 40S ribosomal protein S19 [Cyanophora paradoxa]
Length = 133
Score = 183 bits (465), Expect = 7e-46
Identities = 93/132 (70%), Positives = 106/132 (79%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
MADK TIRTRKFMTNRLL+RKQF++DVLHPGRANVSK EL+EKLA++Y V DP V V+
Sbjct: 1 MADKTCTIRTRKFMTNRLLNRKQFVIDVLHPGRANVSKNELREKLAKMYKVDDPARVLVY 60
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
FRT FGGGKSTGFGLIYDS+ AKK E K+RL+R G+ RKQ KERKNR KK+R
Sbjct: 61 GFRTGFGGGKSTGFGLIYDSVAFAKKTESKFRLVRIGMGEGKAGGRKQRKERKNRMKKVR 120
Query: 121 GVKKTKAADAAK 132
GVKK KAA A+K
Sbjct: 121 GVKKAKAATASK 132
>ref|XP_623734.1| PREDICTED: similar to ribosomal protein S24 [Apis mellifera]
Length = 134
Score = 171 bits (434), Expect = 3e-42
Identities = 86/135 (63%), Positives = 107/135 (78%), Gaps = 1/135 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
M + AVTIRTRKFM+NRLL RKQ +VDV HPG +V K E++EKLA++Y V P+ VFVF
Sbjct: 1 MTEGAVTIRTRKFMSNRLLCRKQMVVDVFHPGHPSVRKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+L+ AKK+EPKYRL R+GL K +++RKQ KERKNR KK+R
Sbjct: 60 GFQTNFGGGKSTGFALIYDTLDFAKKFEPKYRLARHGLFEKQKQTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAADAAKAGK 135
G KK+K A+K K
Sbjct: 120 GTKKSKVGAASKKVK 134
>ref|XP_392330.1| PREDICTED: similar to ribosomal protein S24 [Apis mellifera]
Length = 132
Score = 171 bits (433), Expect = 4e-42
Identities = 85/132 (64%), Positives = 106/132 (79%), Gaps = 1/132 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
M + AVTIRTRKFM+NRLL RKQ +VDV HPG +V K E++EKLA++Y V P+ VFVF
Sbjct: 1 MTEGAVTIRTRKFMSNRLLCRKQMVVDVFHPGHPSVRKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+L+ AKK+EPKYRL R+GL K +++RKQ KERKNR KK+R
Sbjct: 60 GFQTNFGGGKSTGFALIYDTLDFAKKFEPKYRLARHGLFEKQKQTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAADAAK 132
G KK+K A+K
Sbjct: 120 GTKKSKVGAASK 131
>gb|AAK92192.1| ribosomal protein S24 [Spodoptera frugiperda]
gi|20140134|sp|Q962Q6|RS24_SPOFR 40S ribosomal protein
S24
Length = 132
Score = 171 bits (432), Expect = 5e-42
Identities = 85/132 (64%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
M + TIRTRKFMTNRLL+RKQ + DVLHPG+ VSK E++EKLA++Y V P+ VFVF
Sbjct: 1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+L+ AKK+EPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 60 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAADAAK 132
G KK+K AAK
Sbjct: 120 GTKKSKVGAAAK 131
>gb|AAH58140.1| Rps24 protein [Rattus norvegicus] gi|46519160|ref|NP_997518.1|
ribosomal protein S24 isoform 3 [Mus musculus]
gi|57102440|ref|XP_542250.1| PREDICTED: similar to
ribosomal protein S24 isoform 3 [Canis familiaris]
gi|57085131|ref|XP_536400.1| PREDICTED: similar to
ribosomal protein S24 isoform 3 [Canis familiaris]
gi|55728826|emb|CAH91152.1| hypothetical protein [Pongo
pygmaeus] gi|37573967|gb|AAH58817.1| Ribosomal protein
S24, isoform 3 [Mus musculus] gi|437878|emb|CAA50792.1|
ribosomal protein S24 [Mus musculus]
gi|543217|pir||S40161 ribosomal protein S24, cytosolic -
mouse
Length = 131
Score = 170 bits (430), Expect = 8e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>gb|AAV34881.1| ribosomal protein S24 [Bombyx mori] gi|46394422|gb|AAS91555.1|
ribosomal protein S24 [Bombyx mori]
Length = 132
Score = 170 bits (430), Expect = 8e-42
Identities = 84/132 (63%), Positives = 105/132 (78%), Gaps = 1/132 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVF 60
M++ TIRTRKFMTNRLL+RKQ + DVLHPG+ VSK E++EKLA++Y V P+ VFVF
Sbjct: 1 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+L+ AKK+EPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 60 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAADAAK 132
G KK+K A+K
Sbjct: 120 GTKKSKVGAASK 131
>ref|NP_001016625.1| hypothetical protein LOC549379 [Xenopus tropicalis]
Length = 132
Score = 170 bits (430), Expect = 8e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>dbj|BAB26046.1| unnamed protein product [Mus musculus]
Length = 132
Score = 170 bits (430), Expect = 8e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>dbj|BAB25640.1| unnamed protein product [Mus musculus] gi|12832521|dbj|BAB22143.1|
unnamed protein product [Mus musculus]
Length = 134
Score = 170 bits (430), Expect = 8e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>dbj|BAB22498.1| unnamed protein product [Mus musculus]
Length = 131
Score = 170 bits (430), Expect = 8e-42
Identities = 86/132 (65%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYK-STPDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
>ref|NP_001012316.1| ribosomal protein S24 isoform 1 [Danio rerio]
gi|51980430|gb|AAH81494.1| Ribosomal protein S24,
isoform 1 [Danio rerio] gi|66267246|gb|AAH94973.1|
Ribosomal protein S24, isoform 1 [Danio rerio]
Length = 131
Score = 169 bits (429), Expect = 1e-41
Identities = 87/131 (66%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VT+RTRKFMTNRLL RKQ IVDVLHPG+A V K E++EKLA++Y P+ VFVF F+T
Sbjct: 5 VTVRTRKFMTNRLLQRKQMIVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFKTQ 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPKYRL R+GL K + SRKQ KERKNR KK+RG+KK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKYRLQRHGLYEKKKTSRKQRKERKNRMKKVRGIKK- 122
Query: 126 KAADAAKAGKK 136
A +GKK
Sbjct: 123 --ASVGASGKK 131
>emb|CAA24704.1| ribsomal protein S19 [Xenopus laevis] gi|71037|pir||R3XL19
ribosomal protein S24 - African clawed frog
gi|133863|sp|P02377|RS24_XENLA 40S ribosomal protein S24
(S19)
Length = 132
Score = 169 bits (427), Expect = 2e-41
Identities = 85/132 (64%), Positives = 102/132 (76%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLARLYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ ++DVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSLENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDSL+ AKK EPK+RL ++GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAADAAKAGKKK 137
AGKKK
Sbjct: 124 NVG----AGKKK 131
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.134 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,322,778
Number of Sequences: 2540612
Number of extensions: 7998598
Number of successful extensions: 34417
Number of sequences better than 10.0: 246
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 34023
Number of HSP's gapped (non-prelim): 314
length of query: 137
length of database: 863,360,394
effective HSP length: 113
effective length of query: 24
effective length of database: 576,271,238
effective search space: 13830509712
effective search space used: 13830509712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0096b.1