BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0093b.4
(565 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa] 704 0.0
gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crys... 602 e-171
dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thalian... 512 e-143
emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thal... 509 e-143
ref|XP_466770.1| putative timing of CAB expression 1 [Oryza sati... 395 e-108
dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa (japon... 395 e-108
gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana] 178 4e-43
gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana] 178 5e-43
dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana] g... 177 6e-43
gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana] gi|97585... 120 2e-25
ref|NP_568446.1| pseudo-response regulator 5 (APRR5) [Arabidopsi... 120 2e-25
dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa (jap... 113 1e-23
dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana] gi|2... 113 2e-23
ref|XP_479630.1| putative pseudo-response regulator [Oryza sativ... 110 2e-22
dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa (indi... 110 2e-22
dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa (japo... 110 2e-22
gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa ... 107 8e-22
dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa (indi... 107 8e-22
dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa (japo... 107 8e-22
gb|AAN13129.1| unknown protein [Arabidopsis thaliana] gi|1453263... 105 4e-21
>gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 704 bits (1817), Expect = 0.0
Identities = 367/546 (67%), Positives = 438/546 (80%), Gaps = 16/546 (2%)
Query: 16 NNCGGANSKSG----DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVI 71
N GG NS G DAFIDRSKVRIL+CD+D KS EEV TLL+KCSYQVT VRSARQVI
Sbjct: 9 NREGGGNSSKGGGGGDAFIDRSKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVI 68
Query: 72 DALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRL 131
DALNAEG IDIILAE+DLP+ KGMKLLKY++RD +LRRIPVIMMSA+DEV +VVKCLRL
Sbjct: 69 DALNAEGANIDIILAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRL 128
Query: 132 GAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFS 191
GAADYLVKPLRTNELLNLWTH+WRRRRMLGLAEKNIL+YDFD+VASDPSDANTNSTTLFS
Sbjct: 129 GAADYLVKPLRTNELLNLWTHVWRRRRMLGLAEKNILNYDFDLVASDPSDANTNSTTLFS 188
Query: 192 DDTDDRSKRSTNPEAAQQEPEVNVSISKAAAVIEELPGAQISECRPNVPGISDRRTGNFS 251
DDTDDRS RSTNPE E + S A E P ++ E RP+VP ISDRRTG FS
Sbjct: 189 DDTDDRSCRSTNPEMGLSVHEEDESAGAAV----EPPYIELDEYRPDVPKISDRRTGQFS 244
Query: 252 SGPKKSELRIGE-SSAFFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVND 310
SGPKKSEL+IGE SSAFFTYVK +TL+ + +A+V+ + QVR+ + +QAC +Q VND
Sbjct: 245 SGPKKSELKIGESSSAFFTYVKTSTLQKSSPGVANVEEN-VAQVRMGENHQACVQQVVND 303
Query: 311 LKTHENQEMFESRSQ-EDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLY 369
+ +++ E++ES SQ ++ PSSNS PDSFSIERS TP AS+E+ QQ++ ++E + Q +
Sbjct: 304 PQINDSGEVWESYSQGDEFPSSNSMPDSFSIERSSTPSASMELPQQRDLKDERFSQVLSH 363
Query: 370 PSNGSRGSKLEPSGMPAQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ 429
P N +L+ SG+PAQ A+PY SGVVN VM+PS+AQLY KN+ D+ +H+ +M++Q
Sbjct: 364 PRN---EHQLDASGLPAQTAFPYCM-SGVVNQVMMPSAAQLYHKNLHDLQNHSPKAMMSQ 419
Query: 430 YNHLAQCSPHANGMTSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAAL 489
Y+HL QC PH NGM FPYYP+NICLQPGQ+S HSWP GS S EVNLSK DRREAAL
Sbjct: 420 YHHLPQCPPHVNGMAPFPYYPVNICLQPGQMSASHSWP-FGSPSSSEVNLSKVDRREAAL 478
Query: 490 MKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADYDEEEE 549
+KF+QKRK+RCFDKKIRYVNRKRLAERRPRVRGQFVRK++GV+V LNG P S D DE++E
Sbjct: 479 IKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGHPTSVDSDEDDE 538
Query: 550 EEEDNH 555
E+E+ H
Sbjct: 539 EDEEKH 544
>gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 602 bits (1553), Expect = e-171
Identities = 328/562 (58%), Positives = 407/562 (72%), Gaps = 26/562 (4%)
Query: 8 ILNLNSRENNCGG-ANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRS 66
++ EN+ GG +N++ D FIDRSKVRILLCD+D KS EEVF LL CSYQVT VRS
Sbjct: 1 MVQFGDMENDEGGPSNARGSDPFIDRSKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRS 60
Query: 67 ARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVV 126
ARQVIDALNAEG IDIIL+EVDLP KKG+K+LKY+ RD++L+RIPVIMMS +DEV +VV
Sbjct: 61 ARQVIDALNAEGPDIDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVV 120
Query: 127 KCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNS 186
KCLRLGAADYLVKPLRTNE+LNLWTHMWRRR+MLGLAEKNI++YDFD+ ASD SDANTNS
Sbjct: 121 KCLRLGAADYLVKPLRTNEMLNLWTHMWRRRQMLGLAEKNIVNYDFDLAASDHSDANTNS 180
Query: 187 TTLFSDDTDDRSKRSTNPEAA---QQEPEVNVSISKAAAVIEELPGAQISECRPNVPGIS 243
TTLFSDDTDDRS+R N E + Q+E E N + S + +P A + +CRP+VPGI
Sbjct: 181 TTLFSDDTDDRSRRGVNLEMSMTIQEEDESNKATS------DPMP-ADLFDCRPDVPGIC 233
Query: 244 DRRTGNFSSGPKKSELRIGESSAFFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQAC 303
DRRTG F KKSEL+IGE SAFFTYVK++ +K+N Q NHA R+ED ++
Sbjct: 234 DRRTGQFVPFAKKSELKIGECSAFFTYVKSSAVKNNCQAADVEVNHAQPS-RLEDKSERL 292
Query: 304 ARQRVNDLKTHENQEMFESRSQEDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYY 363
N EN E +E+ S ED SS S PDS S+ERSCT P S++ K+ E
Sbjct: 293 NEVVNNGNMRCENGETWENNSNEDFRSSTSVPDSTSMERSCT-PVSLDFMPNKSMDEGL- 350
Query: 364 PQGSLYPSNGSRGSKLEPSGMPAQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHAN 423
S N G+ + SG+ A AYPYY SG++N VM+ SSA +Y+K++Q+ H
Sbjct: 351 ---SQVHMNSRNGAHFDVSGL-AHSAYPYYM-SGMMNQVMMSSSAHMYRKDLQE---HGT 402
Query: 424 SSMIAQYNHLAQCSPHANGMT-SFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKA 482
S+++ YNHL+ C PH GM + YYP+N+C+Q GQ+ + H PS G+S S EV L +
Sbjct: 403 SAVMPHYNHLSHCPPHVPGMAPPYTYYPLNLCIQQGQLPSNHQMPSFGNSSSSEVKLREV 462
Query: 483 DRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASA 542
DRREAAL+KF+QKRK+RCFDKKIRYVNRK+LAERRPRVRGQFVRK++GV V LNG P+ A
Sbjct: 463 DRREAALIKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVTVDLNGDPSPA 522
Query: 543 DYDEEEEEEEDNHVARDSSLED 564
D D+E+E+++D RDS ED
Sbjct: 523 DLDDEDEDDDD---PRDSYAED 541
>dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1
[Arabidopsis thaliana] gi|29028744|gb|AAO64751.1|
At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150
[Arabidopsis thaliana] gi|15240235|ref|NP_200946.1|
ABI3-interacting protein 1 (AIP1) [Arabidopsis thaliana]
gi|9247020|gb|AAF86252.1| timing of CAB expression 1
protein [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2|APRR1_ARATH Two-component response
regulator-like APRR1 (Pseudo-response regulator 1)
(Timing of CAB expression 1) (ABI3-interacting protein
1)
Length = 618
Score = 512 bits (1319), Expect = e-143
Identities = 315/627 (50%), Positives = 386/627 (61%), Gaps = 107/627 (17%)
Query: 24 KSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDI 83
K GD FIDRS+VRILLCD+D S EVFTLL +CSYQVT V+SARQVIDALNAEG IDI
Sbjct: 8 KGGDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDI 67
Query: 84 ILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRT 143
ILAE+DLP+ KGMK+L+Y++RDK+LRRIPVIMMS +DEVP+VVKCL+LGAADYLVKPLRT
Sbjct: 68 ILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRT 127
Query: 144 NELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTN 203
NELLNLWTHMWRRRRMLGLAEKN+LSYDFD+V SD SD NTNST LFSDDTDDRS RSTN
Sbjct: 128 NELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTN 187
Query: 204 PE---AAQQEPEVNV----------------SISKAAAVIEELPGAQISECRPNVPGISD 244
P+ + QE E +V + + + AV P + P +
Sbjct: 188 PQRGNLSHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEPPLDHLAGSHHEPMKRN 247
Query: 245 RRTGNFSSGPKKSELRIGESSAFFTYVKATTLKSNVQEIAHVDNHATTQ----------- 293
FSS PKKS L+IGESSAFFTYVK+T L++N Q+ VD + +
Sbjct: 248 SNPAQFSSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDGNGSLHLHRGLAEKFQV 307
Query: 294 VRVEDMN-----------------------------------------QACARQRVNDLK 312
V E +N Q A + +N+ K
Sbjct: 308 VASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGAAEKFQVVASEGINNTK 367
Query: 313 -THENQEMFESRSQ-EDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYP 370
H ++ + SQ E L + S+P S+ERS T P S+E S +N++E +
Sbjct: 368 QAHRSRGTEQYHSQGETLQNGASYP--HSLERSRTLPTSME-SHGRNYQEGNMNIPQVAM 424
Query: 371 SNGSRGSKLEPSGMPAQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQY 430
+ S+++ SG A +AYPYY + GV+N VM+ S+A M+ QY
Sbjct: 425 NRSKDSSQVDGSGFSAPNAYPYYMH-GVMNQVMMQSAA-----------------MMPQY 466
Query: 431 NH-LAQCSP-HANGMTSFPYY--PMNICLQPGQVS--------TPHSWPSLGSSGSCEVN 478
H + C P H NGMT +PYY PMN LQ Q+S HSW G+ S EV
Sbjct: 467 GHQIPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHSWSPAGNPPSNEVR 526
Query: 479 LSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQ 538
++K DRRE AL+KF++KR RCFDKKIRYVNRKRLAERRPRV+GQFVRK++GV+V LNGQ
Sbjct: 527 VNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ 586
Query: 539 PASADY-DEEEEEEEDNHVARDSSLED 564
P SADY DEEEEEEE+ RDSS +D
Sbjct: 587 PDSADYDDEEEEEEEEEEENRDSSPQD 613
>emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
gi|25453510|pir||T52076 ABI3-interacting protein aip1
[imported] - Arabidopsis thaliana
Length = 618
Score = 509 bits (1312), Expect = e-143
Identities = 314/627 (50%), Positives = 385/627 (61%), Gaps = 107/627 (17%)
Query: 24 KSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDI 83
K GD FIDRS+VRILLCD+D S EVFTLL +CSYQVT V+SARQVIDALNAEG IDI
Sbjct: 8 KGGDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDI 67
Query: 84 ILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRT 143
ILAE+DLP+ KGMK+L+Y++RDK+LRRIPVIMMS +DEVP+VVKCL+LGAADYLVKPL T
Sbjct: 68 ILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLT 127
Query: 144 NELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTN 203
NELLNLWTHMWRRRRMLGLAEKN+LSYDFD+V SD SD NTNST LFSDDTDDRS RSTN
Sbjct: 128 NELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLRSTN 187
Query: 204 PE---AAQQEPEVNV----------------SISKAAAVIEELPGAQISECRPNVPGISD 244
P+ + QE E +V + + + AV P + P +
Sbjct: 188 PQRGNLSHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEPPLDHLAGSHHEPMKRN 247
Query: 245 RRTGNFSSGPKKSELRIGESSAFFTYVKATTLKSNVQEIAHVDNHATTQ----------- 293
FSS PKKS L+IGESSAFFTYVK+T L++N Q+ VD + +
Sbjct: 248 SNPAQFSSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDGNGSLHLHRGLAEKFQV 307
Query: 294 VRVEDMN-----------------------------------------QACARQRVNDLK 312
V E +N Q A + +N+ K
Sbjct: 308 VASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGAAEKFQVVASEGINNTK 367
Query: 313 -THENQEMFESRSQ-EDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYP 370
H ++ + SQ E L + S+P S+ERS T P S+E S +N++E +
Sbjct: 368 QAHRSRGTEQYHSQGETLQNGASYP--HSLERSRTLPTSME-SHGRNYQEGNMNIPQVAM 424
Query: 371 SNGSRGSKLEPSGMPAQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQY 430
+ S+++ SG A +AYPYY + GV+N VM+ S+A M+ QY
Sbjct: 425 NRSKDSSQVDGSGFSAPNAYPYYMH-GVMNQVMMQSAA-----------------MMPQY 466
Query: 431 NH-LAQCSP-HANGMTSFPYY--PMNICLQPGQVS--------TPHSWPSLGSSGSCEVN 478
H + C P H NGMT +PYY PMN LQ Q+S HSW G+ S EV
Sbjct: 467 GHQIPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHSWSPAGNPPSNEVR 526
Query: 479 LSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQ 538
++K DRRE AL+KF++KR RCFDKKIRYVNRKRLAERRPRV+GQFVRK++GV+V LNGQ
Sbjct: 527 VNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ 586
Query: 539 PASADY-DEEEEEEEDNHVARDSSLED 564
P SADY DEEEEEEE+ RDSS +D
Sbjct: 587 PDSADYDDEEEEEEEEEEENRDSSPQD 613
>ref|XP_466770.1| putative timing of CAB expression 1 [Oryza sativa (japonica
cultivar-group)] gi|47847675|dbj|BAD21456.1| putative
timing of CAB expression 1 [Oryza sativa (japonica
cultivar-group)] gi|47847546|dbj|BAD21598.1| putative
timing of CAB expression 1 [Oryza sativa (japonica
cultivar-group)]
Length = 518
Score = 395 bits (1014), Expect = e-108
Identities = 235/540 (43%), Positives = 313/540 (57%), Gaps = 47/540 (8%)
Query: 19 GGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEG 78
GGA G F+DRSKVRILLCD DP SS EV LL CSYQVT +S RQVI+ LN E
Sbjct: 12 GGAAVGGGQQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEA 71
Query: 79 QYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLV 138
IDIILAEVDLP+ K K+LKY++R+KELR IP+IMMS +DEV +VVKCLRLGAA+YLV
Sbjct: 72 GEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLV 131
Query: 139 KPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRS 198
KPLR NELLNLWTH+WRRRRMLGL+EKN + +F++ S+PSDANTNSTTL SDDTDD+
Sbjct: 132 KPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKP 191
Query: 199 KRSTNPEAA---QQEPEVNVSIS--KAAAVIEELPGAQISECRPNVPGISDRRTGNFSSG 253
K + N E + Q E E N S + K E L + + + PG+ S
Sbjct: 192 KENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGV-------MFSR 244
Query: 254 PKKSELRIGESSAFFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKT 313
P K+ LR+ ESSAF YVK++T TT ++ + N L +
Sbjct: 245 PIKTNLRVAESSAFLAYVKSST--------------PTTSSFDSELQKG-----GNRLDS 285
Query: 314 HENQEMFESRS-QEDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYPSN 372
+++ F S + + D + + D + E P + +L+
Sbjct: 286 SDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVC------------FSSSNLHLER 333
Query: 373 GSRGSKLEPSGMPAQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQYNH 432
+ G + SG P + +P+YY G+++H M Q +Q N+ + H +++ QYN
Sbjct: 334 SNEGQN-DASGTPPVYHFPFYY-PGMMDHGMTHPPVQNFQGNINNAQVHTPQTLLPQYNV 391
Query: 433 LAQCSPHANGMTSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALMKF 492
QC + M F Y P + +Q Q+ T + WP S+ E S+++RR AAL KF
Sbjct: 392 YPQCH-GVSMMPPFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKF 450
Query: 493 KQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADYDEEEEEEE 552
+ KRK+RCFDKK+RYVNRK+LAE RPRVRGQFVR+ + D+ G S D D++ E
Sbjct: 451 RLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQANYTDITSTGDDISEDEDDDPSSRE 510
>dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa (japonica
cultivar-group)]
Length = 518
Score = 395 bits (1014), Expect = e-108
Identities = 235/540 (43%), Positives = 313/540 (57%), Gaps = 47/540 (8%)
Query: 19 GGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEG 78
GGA G F+DRSKVRILLCD DP SS EV LL CSYQVT +S RQVI+ LN E
Sbjct: 12 GGAAVGEGQQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEA 71
Query: 79 QYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLV 138
IDIILAEVDLP+ K K+LKY++R+KELR IP+IMMS +DEV +VVKCLRLGAA+YLV
Sbjct: 72 GEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLV 131
Query: 139 KPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRS 198
KPLR NELLNLWTH+WRRRRMLGL+EKN + +F++ S+PSDANTNSTTL SDDTDD+
Sbjct: 132 KPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKP 191
Query: 199 KRSTNPEAA---QQEPEVNVSIS--KAAAVIEELPGAQISECRPNVPGISDRRTGNFSSG 253
K + N E + Q E E N S + K E L + + + PG+ S
Sbjct: 192 KENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGV-------MFSR 244
Query: 254 PKKSELRIGESSAFFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKT 313
P K+ LR+ ESSAF YVK++T TT ++ + N L +
Sbjct: 245 PIKTNLRVAESSAFLAYVKSST--------------PTTSSFDSELQKG-----GNRLDS 285
Query: 314 HENQEMFESRS-QEDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYPSN 372
+++ F S + + D + + D + E P + +L+
Sbjct: 286 SDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVC------------FSSSNLHLER 333
Query: 373 GSRGSKLEPSGMPAQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQYNH 432
+ G + SG P + +P+YY G+++H M Q +Q N+ + H +++ QYN
Sbjct: 334 SNEGQN-DASGTPPVYHFPFYY-PGMMDHGMTHPPVQNFQGNINNAQVHTPQTLLPQYNV 391
Query: 433 LAQCSPHANGMTSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALMKF 492
QC + M F Y P + +Q Q+ T + WP S+ E S+++RR AAL KF
Sbjct: 392 YPQCH-GVSMMPPFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKF 450
Query: 493 KQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADYDEEEEEEE 552
+ KRK+RCFDKK+RYVNRK+LAE RPRVRGQFVR+ + D+ G S D D++ E
Sbjct: 451 RLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQANYTDITSTGDDISEDEDDDPSSRE 510
>gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 178 bits (452), Expect = 4e-43
Identities = 157/512 (30%), Positives = 235/512 (45%), Gaps = 94/512 (18%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ ++ +++LL ++D + V LL CSY+VT V + L E ID++L
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EVD+P+ G LL + K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTNPEA 206
NLW H+WRR +S++ ++ K+S PE+
Sbjct: 176 KNLWQHVWRR---------------------------CHSSSGSGSESGIHDKKSVKPES 208
Query: 207 AQQEPEVNVSISKAAAVIEELPGAQISECRPNVPGISDRRTGNFSSGPKKSELRIGESSA 266
+ E + SIS E + S N G SD +G SS K++
Sbjct: 209 TEGS-ENDASISD-----EHRNESGSSGGLSNQDGGSDNGSGTQSSWTKRA--------- 253
Query: 267 FFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQ-EMFESRSQ 325
+ K+T+ + E + + CA VN LK E+Q E + SQ
Sbjct: 254 --SDTKSTSPSNQFPESPN---------KKGTYENGCA--HVNRLKEAEDQKEQIGTGSQ 300
Query: 326 EDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMP 385
+ S + +E++ SV+ ++KN +L N S G+ S P
Sbjct: 301 TGMSMSKKAEEPGDLEKNA--KYSVQALERKN-------DDTL---NRSSGNSQVESKAP 348
Query: 386 AQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMTS 445
+ N L S Q +K +D + ++++L+ S + NG TS
Sbjct: 349 SS------------NREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATS 396
Query: 446 FPYYPMNICLQPGQVSTPHSWP---SLGSSGSCEVNL----SKADR---REAALMKFKQK 495
P + + +PH P LGSS S + L S +DR REAALMKF+ K
Sbjct: 397 AKKAPE----ENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLK 452
Query: 496 RKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 527
RK+RCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 453 RKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 178 bits (451), Expect = 5e-43
Identities = 156/512 (30%), Positives = 235/512 (45%), Gaps = 94/512 (18%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ ++ +++LL ++D + V LL CSY++T V + L E ID++L
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EVD+P+ G LL + K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTNPEA 206
NLW H+WRR +S++ ++ K+S PE+
Sbjct: 176 KNLWQHVWRR---------------------------CHSSSGSGSESGIHDKKSVKPES 208
Query: 207 AQQEPEVNVSISKAAAVIEELPGAQISECRPNVPGISDRRTGNFSSGPKKSELRIGESSA 266
+ E + SIS E + S N G SD +G SS K++
Sbjct: 209 TEGS-ENDASISD-----EHRNESGSSGGLSNQDGGSDNGSGTQSSWTKRA--------- 253
Query: 267 FFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQ-EMFESRSQ 325
+ K+T+ + E + + CA VN LK E+Q E + SQ
Sbjct: 254 --SDTKSTSPSNQFPESPN---------KKGTYENGCA--HVNRLKEAEDQKEQIGTGSQ 300
Query: 326 EDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMP 385
+ S + +E++ SV+ ++KN +L N S G+ S P
Sbjct: 301 TGMSMSKKAEEPGDLEKNA--KYSVQALERKN-------DDTL---NRSSGNSQVESKAP 348
Query: 386 AQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMTS 445
+ N L S Q +K +D + ++++L+ S + NG TS
Sbjct: 349 SS------------NREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATS 396
Query: 446 FPYYPMNICLQPGQVSTPHSWP---SLGSSGSCEVNL----SKADR---REAALMKFKQK 495
P + + +PH P LGSS S + L S +DR REAALMKF+ K
Sbjct: 397 AKKAPE----ENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLK 452
Query: 496 RKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 527
RK+RCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 453 RKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|18424319|ref|NP_568919.1| pseudo-response regulator 3
(APRR3) [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4|APRR3_ARATH Two-component response
regulator-like APRR3 (Pseudo-response regulator 3)
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3
[Arabidopsis thaliana]
Length = 495
Score = 177 bits (450), Expect = 6e-43
Identities = 155/512 (30%), Positives = 227/512 (44%), Gaps = 94/512 (18%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ ++ +++LL ++D + V LL CSY+VT V + L E ID++L
Sbjct: 56 ERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLT 115
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EVD+P+ G LL + K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 116 EVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNEL 175
Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTNPEA 206
NLW H+WRR +S++ ++ K+S PE+
Sbjct: 176 KNLWQHVWRR---------------------------CHSSSGSGSESGIHDKKSVKPES 208
Query: 207 AQQEPEVNVSISKAAAVIEELPGAQISECRPNVPGISDRRTGNFSSGPKKSELRIGESSA 266
Q A IS+ N G S G S+ S+ G S+
Sbjct: 209 TQGSEN----------------DASISDEHRNESGSS----GGLSNQDGGSDNGSGTQSS 248
Query: 267 FFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQ-EMFESRSQ 325
+ T S + N T CA VN LK E+Q E + SQ
Sbjct: 249 WTKRASDTKSTSPSNQFPDAPNKKGT------YENGCA--HVNRLKEAEDQKEQIGTGSQ 300
Query: 326 EDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMP 385
+ S + +E++ SV+ ++ N +L N S G+ S P
Sbjct: 301 TGMSMSKKAEEPGDLEKNA--KYSVQALERNN-------DDTL---NRSSGNSQVESKAP 348
Query: 386 AQHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMTS 445
+ N L S Q +K +D + ++++L+ S + NG TS
Sbjct: 349 SS------------NREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATS 396
Query: 446 FPYYPMNICLQPGQVSTPHSWP---SLGSSGSCEVNL----SKADR---REAALMKFKQK 495
P + + +PH P LGSS S + L S +DR REAALMKF+ K
Sbjct: 397 AKKAPE----ENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLK 452
Query: 496 RKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 527
RK+RCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 453 RKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana] gi|9758535|dbj|BAB08930.1|
unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5
protein [Arabidopsis thaliana]
gi|52783225|sp|Q6LA42|APRR5_ARATH Two-component response
regulator-like APRR5 (Pseudo-response regulator 5)
Length = 558
Score = 120 bits (300), Expect = 2e-25
Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 11/229 (4%)
Query: 14 RENNCGGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDA 73
R+ + G + F+ + +R+LL + D + + + LL KCSY+V V + +
Sbjct: 29 RKKDAGVDGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEM 88
Query: 74 LNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGA 133
L + + +D+IL EVDLP G LL + + IPVIMMS +D V V KC+ GA
Sbjct: 89 LKGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGA 148
Query: 134 ADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTT----- 188
ADYLVKPLR NEL NLW H+WRR+ L + ++ + A+ N++
Sbjct: 149 ADYLVKPLRRNELRNLWQHVWRRQTSLA---PDSFPWNESVGQQKAEGASANNSNGKRDD 205
Query: 189 -LFSDDTDDRSKRSTNPEAAQQEPEVNVSISKAAAVIEELPGAQISECR 236
+ S + D T PE + +V VS A + E +Q +E R
Sbjct: 206 HVVSGNGGDAQSSCTRPEMEGESADVEVSARDAVQM--ECAKSQFNETR 252
Score = 72.0 bits (175), Expect = 5e-11
Identities = 30/45 (66%), Positives = 42/45 (92%)
Query: 484 RREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 528
+REAAL KF+ KRKDRC++KK+RY +RK+LAE+RPR++GQFVR++
Sbjct: 508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 552
>ref|NP_568446.1| pseudo-response regulator 5 (APRR5) [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5
[Arabidopsis thaliana]
Length = 667
Score = 120 bits (300), Expect = 2e-25
Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 11/229 (4%)
Query: 14 RENNCGGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDA 73
R+ + G + F+ + +R+LL + D + + + LL KCSY+V V + +
Sbjct: 138 RKKDAGVDGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEM 197
Query: 74 LNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGA 133
L + + +D+IL EVDLP G LL + + IPVIMMS +D V V KC+ GA
Sbjct: 198 LKGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGA 257
Query: 134 ADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTT----- 188
ADYLVKPLR NEL NLW H+WRR+ L + ++ + A+ N++
Sbjct: 258 ADYLVKPLRRNELRNLWQHVWRRQTSLA---PDSFPWNESVGQQKAEGASANNSNGKRDD 314
Query: 189 -LFSDDTDDRSKRSTNPEAAQQEPEVNVSISKAAAVIEELPGAQISECR 236
+ S + D T PE + +V VS A + E +Q +E R
Sbjct: 315 HVVSGNGGDAQSSCTRPEMEGESADVEVSARDAVQM--ECAKSQFNETR 361
Score = 72.0 bits (175), Expect = 5e-11
Identities = 30/45 (66%), Positives = 42/45 (92%)
Query: 484 RREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 528
+REAAL KF+ KRKDRC++KK+RY +RK+LAE+RPR++GQFVR++
Sbjct: 617 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 661
>dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa (japonica
cultivar-group)] gi|52075943|dbj|BAD46023.1|
peudo-response regulator-like [Oryza sativa (japonica
cultivar-group)] gi|51571881|dbj|BAD38857.1|
pseudo-response regulator 95 [Oryza sativa (japonica
cultivar-group)]
Length = 623
Score = 113 bits (283), Expect = 1e-23
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Query: 21 ANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY 80
A S + R VR+LL + D + + LL KC Y+V + D L +
Sbjct: 29 AGSSRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFN 88
Query: 81 IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKP 140
ID++L EV+LP+ G LL + + IPVIMMS+ D V +V KC+ GAAD+LVKP
Sbjct: 89 IDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKP 148
Query: 141 LRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKR 200
+R NEL NLW H+WR++ G +L + ++ + T + + +
Sbjct: 149 IRKNELRNLWQHVWRKQLSSG-----VLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVV 203
Query: 201 STNPEAAQQEPEVNVSISKA 220
N E ++QE + S +++
Sbjct: 204 HKNMECSEQESDAQSSCTRS 223
Score = 72.8 bits (177), Expect = 3e-11
Identities = 35/53 (66%), Positives = 43/53 (81%)
Query: 479 LSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGV 531
L +REAAL KF+ KRKDRCF+KK+RY +RK LAE+RPRV+GQFVR+ GV
Sbjct: 568 LRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDHGV 620
>dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein
[Arabidopsis thaliana] gi|9247022|gb|AAF86253.1| timing
of CAB expression 1-like protein [Arabidopsis thaliana]
gi|18407171|ref|NP_566085.1| pseudo-response regulator 9
(APRR9) / timing of CAB expression 1-like protein (TL1)
[Arabidopsis thaliana] gi|52783231|sp|Q8L500|APRR9_ARATH
Two-component response regulator-like APRR9
(Pseudo-response regulator 9)
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9
[Arabidopsis thaliana]
Length = 468
Score = 113 bits (282), Expect = 2e-23
Identities = 53/130 (40%), Positives = 81/130 (61%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ ++ ++ +R+LL + D + + + LL KC Y+V V + L + ID+IL
Sbjct: 29 EKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILT 88
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
E+DLP G LL + + + IPVIMMS++D + +V+KC+ GAADYL+KP+R NEL
Sbjct: 89 ELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNEL 148
Query: 147 LNLWTHMWRR 156
NLW H+WRR
Sbjct: 149 KNLWQHVWRR 158
Score = 76.3 bits (186), Expect = 3e-12
Identities = 34/46 (73%), Positives = 43/46 (92%)
Query: 484 RREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLS 529
+REAALMKF+ KRKDRCFDKK+RY +RK+LAE+RPRV+GQFVR ++
Sbjct: 416 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 461
>ref|XP_479630.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)] gi|34394035|dbj|BAC84066.1| putative
pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 110 bits (274), Expect = 2e-22
Identities = 61/170 (35%), Positives = 85/170 (49%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ FI + +++LL D D + + V LL C Y+V P + +Q L ID++L
Sbjct: 54 ERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLT 113
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EV +P G+ LL + + IPVIMMS+ D + V KCL GA D+LVKP+R NEL
Sbjct: 114 EVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNEL 173
Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDD 196
NLW H+WRR + S D + N+ DD DD
Sbjct: 174 KNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDD 223
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/70 (52%), Positives = 49/70 (69%), Gaps = 3/70 (4%)
Query: 461 STPHSWPSLGSSGSCEVNLSKADRRE---AALMKFKQKRKDRCFDKKIRYVNRKRLAERR 517
S P GS ++ L + +RE AA++KF+QKRK+R F KK+RY +RKRLAE+R
Sbjct: 655 SGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQR 714
Query: 518 PRVRGQFVRK 527
PRVRGQFVR+
Sbjct: 715 PRVRGQFVRQ 724
>dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa (indica cultivar-group)]
Length = 704
Score = 110 bits (274), Expect = 2e-22
Identities = 61/170 (35%), Positives = 85/170 (49%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ FI + +++LL D D + + V LL C Y+V P + +Q L ID++L
Sbjct: 54 ERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLT 113
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EV +P G+ LL + + IPVIMMS+ D + V KCL GA D+LVKP+R NEL
Sbjct: 114 EVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNEL 173
Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDD 196
NLW H+WRR + S D + N+ DD DD
Sbjct: 174 KNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDD 223
Score = 37.7 bits (86), Expect = 0.99
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 461 STPHSWPSLGSSGSCEVNLSKADRRE---AALMKFKQKRKDRCFDKKIRY 507
S P GS ++ L + +RE AA++KF+QKRK+R F KK+RY
Sbjct: 655 SGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRY 704
>dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 110 bits (274), Expect = 2e-22
Identities = 61/170 (35%), Positives = 85/170 (49%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ FI + +++LL D D + + V LL C Y+V P + +Q L ID++L
Sbjct: 54 ERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLT 113
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EV +P G+ LL + + IPVIMMS+ D + V KCL GA D+LVKP+R NEL
Sbjct: 114 EVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNEL 173
Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFSDDTDD 196
NLW H+WRR + S D + N+ DD DD
Sbjct: 174 KNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDD 223
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/70 (52%), Positives = 49/70 (69%), Gaps = 3/70 (4%)
Query: 461 STPHSWPSLGSSGSCEVNLSKADRRE---AALMKFKQKRKDRCFDKKIRYVNRKRLAERR 517
S P GS ++ L + +RE AA++KF+QKRK+R F KK+RY +RKRLAE+R
Sbjct: 655 SGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQR 714
Query: 518 PRVRGQFVRK 527
PRVRGQFVR+
Sbjct: 715 PRVRGQFVRQ 724
>gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa (japonica
cultivar-group)] gi|50948993|ref|XP_493854.1| putative
pseudo-response regulator [Oryza sativa (japonica
cultivar-group)]
Length = 789
Score = 107 bits (268), Expect = 8e-22
Identities = 54/130 (41%), Positives = 77/130 (58%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ F+ +R+LL ++D + + V LL KC Y+V P + L +ID++L
Sbjct: 73 ERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLT 132
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EV +P G+ LL ++ K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL
Sbjct: 133 EVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNEL 192
Query: 147 LNLWTHMWRR 156
NLW H+WRR
Sbjct: 193 KNLWQHVWRR 202
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/63 (58%), Positives = 45/63 (70%), Gaps = 8/63 (12%)
Query: 485 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADY 544
REAAL KF+QKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ A
Sbjct: 734 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQEDQAGQ 785
Query: 545 DEE 547
DE+
Sbjct: 786 DED 788
>dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa (indica cultivar-group)]
Length = 767
Score = 107 bits (268), Expect = 8e-22
Identities = 54/130 (41%), Positives = 77/130 (58%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ F+ +R+LL ++D + + V LL KC Y+V P + L +ID++L
Sbjct: 73 ERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLT 132
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EV +P G+ LL ++ K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL
Sbjct: 133 EVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNEL 192
Query: 147 LNLWTHMWRR 156
NLW H+WRR
Sbjct: 193 KNLWQHVWRR 202
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/63 (58%), Positives = 45/63 (70%), Gaps = 8/63 (12%)
Query: 485 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADY 544
REAAL KF+QKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ A
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQEDQAGQ 763
Query: 545 DEE 547
DE+
Sbjct: 764 DED 766
>dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa (japonica
cultivar-group)]
Length = 767
Score = 107 bits (268), Expect = 8e-22
Identities = 54/130 (41%), Positives = 77/130 (58%)
Query: 27 DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
+ F+ +R+LL ++D + + V LL KC Y+V P + L +ID++L
Sbjct: 73 ERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLT 132
Query: 87 EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
EV +P G+ LL ++ K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL
Sbjct: 133 EVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNEL 192
Query: 147 LNLWTHMWRR 156
NLW H+WRR
Sbjct: 193 KNLWQHVWRR 202
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/63 (58%), Positives = 45/63 (70%), Gaps = 8/63 (12%)
Query: 485 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADY 544
REAAL KF+QKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ A
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQEDQAGQ 763
Query: 545 DEE 547
DE+
Sbjct: 764 DED 766
>gb|AAN13129.1| unknown protein [Arabidopsis thaliana] gi|14532638|gb|AAK64047.1|
unknown protein [Arabidopsis thaliana]
gi|18414032|ref|NP_568107.1| pseudo-response regulator 7
(APRR7) [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5|APRR7_ARATH Two-component response
regulator-like APRR7 (Pseudo-response regulator 7)
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7
[Arabidopsis thaliana]
Length = 727
Score = 105 bits (262), Expect = 4e-21
Identities = 75/260 (28%), Positives = 116/260 (43%), Gaps = 21/260 (8%)
Query: 2 ESEAEEILNLNSRENNCGG---------ANSKSGDAFIDRSKVRILLCDDDPKSSEEVFT 52
E E + ++ R + GG A + + F+ +R+LL ++D + V
Sbjct: 36 EEEKTNGITMDVRNGSSGGLQIPLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTA 95
Query: 53 LLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIP 112
LL CSY+V + Q L +IDI+L EV +P G+ LL + K R IP
Sbjct: 96 LLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIP 155
Query: 113 VIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLG---------LA 163
VIMMS+ D + +V KCL GA D+LVKP+R NEL LW H+WRR +
Sbjct: 156 VIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQT 215
Query: 164 EKNILSYDFDMVASDPSDANTNSTTLFSDDTDDRSKRSTNPEAAQQEPEVNVSISKAAAV 223
+K++ S D ++ N + D S + +++ + V+V S A
Sbjct: 216 QKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVS 275
Query: 224 I---EELPGAQISECRPNVP 240
+ + AQ+ P P
Sbjct: 276 LWDRVDSTCAQVVHSNPEFP 295
Score = 85.9 bits (211), Expect = 3e-15
Identities = 101/373 (27%), Positives = 154/373 (41%), Gaps = 48/373 (12%)
Query: 175 VASDPSDANTNSTTL--FSDDTDDRSKRSTNPEAAQQEPEVNVSISKAAAVIEELPGAQI 232
V P D ++ S + +D K ++ +EPE + K E +I
Sbjct: 367 VGKGPLDLSSESPSSKQMHEDGGSSFKAMSSHLQDNREPEAPNTHLKTLDTNEA--SVKI 424
Query: 233 SECRPNVPGISDRRTGNFSSGP----KKSELRIGESSAFFTYVKATTLKS----NVQEIA 284
SE +V S R G G ++ LR E SAF Y A+ N+ +
Sbjct: 425 SEELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTS 484
Query: 285 HVDNHATTQVRVEDMNQACARQRVNDLKTHENQEMFESRSQEDLPSSNSFPDSFSIERSC 344
DN++ ++ + C H N + SN+F S + E +
Sbjct: 485 LQDNNSQDLIKKTEAAYDC----------HSNMNESLPHNHRSHVGSNNFDMSSTTENNA 534
Query: 345 TPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMPAQHAYPYYYNSGVVNHVML 404
F + P+ S S+ + S +P + + Y V L
Sbjct: 535 -------------FTKPGAPKVSSAGSSSVKHSSFQPLPCDHHNNHASYNLVHVAERKKL 581
Query: 405 P---SSAQLYQKNMQDIHSHANSSMIAQYNHLAQCS--PH--ANGMTSFPYYPMNICLQP 457
P S+ +Y + ++ ++ N S+ + S P+ +NGM + MN+
Sbjct: 582 PPQCGSSNVYNETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGG---MNMGSDN 638
Query: 458 GQVSTPHSWPSLGSSGSCEVNLS---KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLA 514
G + S SGS NL+ K +REAAL KF+QKRK+RCF KK+RY +RK+LA
Sbjct: 639 GAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLA 698
Query: 515 ERRPRVRGQFVRK 527
E+RPRVRGQFVRK
Sbjct: 699 EQRPRVRGQFVRK 711
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 954,544,116
Number of Sequences: 2540612
Number of extensions: 40151539
Number of successful extensions: 130848
Number of sequences better than 10.0: 6345
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 3835
Number of HSP's that attempted gapping in prelim test: 126255
Number of HSP's gapped (non-prelim): 6779
length of query: 565
length of database: 863,360,394
effective HSP length: 133
effective length of query: 432
effective length of database: 525,458,998
effective search space: 226998287136
effective search space used: 226998287136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0093b.4