BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0083.5
(176 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO42403.1| unknown protein [Arabidopsis thaliana] gi|2775452... 286 2e-76
gb|AAM14941.1| hypothetical protein [Arabidopsis thaliana] gi|22... 271 8e-72
gb|AAO50616.1| unknown protein [Arabidopsis thaliana] gi|2839327... 171 1e-41
gb|AAF02154.1| hypothetical protein [Arabidopsis thaliana] 166 2e-40
emb|CAB78327.1| putative protein [Arabidopsis thaliana] gi|45862... 159 2e-38
emb|CAB75444.1| putative protein [Arabidopsis thaliana] gi|11358... 142 3e-33
gb|AAN12913.1| At3g59470/T16L24_20 [Arabidopsis thaliana] gi|166... 142 3e-33
gb|AAS88777.1| At4g12850 [Arabidopsis thaliana] gi|45476551|gb|A... 111 8e-24
emb|CAB80483.1| hypothetical protein [Arabidopsis thaliana] gi|4... 111 1e-23
ref|XP_469570.1| putative transposase [Oryza sativa (japonica cu... 99 4e-20
gb|AAT78829.1| putative FAR1 protein [Oryza sativa (japonica cul... 91 1e-17
gb|AAL73980.1| putative far-red impaired response protein [Sorgh... 89 7e-17
dbj|BAD94730.1| Mutator-like transposase [Arabidopsis thaliana] 87 3e-16
gb|AAC69951.1| Mutator-like transposase [Arabidopsis thaliana] g... 87 3e-16
ref|NP_180784.2| far-red impaired responsive protein, putative [... 87 3e-16
ref|NP_973580.1| far-red impaired responsive protein, putative [... 87 3e-16
ref|NP_912635.1| Putative far-red impaired response protein [Ory... 80 2e-14
gb|AAX94831.1| transposon protein, putative, unclassified [Oryza... 80 3e-14
gb|AAX92763.1| transposon protein, putative, unclassified [Oryza... 80 3e-14
gb|AAQ62876.1| At1g76320 [Arabidopsis thaliana] gi|62320160|dbj|... 79 4e-14
>gb|AAO42403.1| unknown protein [Arabidopsis thaliana] gi|27754520|gb|AAO22707.1|
unknown protein [Arabidopsis thaliana]
gi|30689328|ref|NP_181857.2| far-red impaired responsive
family protein / FAR1 family protein [Arabidopsis
thaliana]
Length = 206
Score = 286 bits (731), Expect = 2e-76
Identities = 131/171 (76%), Positives = 156/171 (90%)
Query: 3 FESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGSIR 62
FESEDAAK+FYD+Y+R +GFVMRVMSCRRSE+DGRILARR GCNKEGHC++IRGK GS+R
Sbjct: 28 FESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKFGSVR 87
Query: 63 RPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTA 122
+PR STREGCKAMIH+KYD+SGKWVITKFVK+HNHPLVVSPREAR T+DEKDK+IQELT
Sbjct: 88 KPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKDKRIQELTI 147
Query: 123 EIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFEPIEELL 173
E+R KKRLCA Y+EQL +F KIVEEHS++++ K+ ++VNNLKEFE +E L
Sbjct: 148 ELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEHAL 198
>gb|AAM14941.1| hypothetical protein [Arabidopsis thaliana]
gi|2289005|gb|AAB64334.1| hypothetical protein
[Arabidopsis thaliana] gi|25370598|pir||C84864
hypothetical protein At2g43280 [imported] - Arabidopsis
thaliana
Length = 171
Score = 271 bits (692), Expect = 8e-72
Identities = 123/163 (75%), Positives = 148/163 (90%)
Query: 11 VFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGSIRRPRASTRE 70
+FYD+Y+R +GFVMRVMSCRRSE+DGRILARR GCNKEGHC++IRGK GS+R+PR STRE
Sbjct: 1 MFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKFGSVRKPRPSTRE 60
Query: 71 GCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAEIRIKKRL 130
GCKAMIH+KYD+SGKWVITKFVK+HNHPLVVSPREAR T+DEKDK+IQELT E+R KKRL
Sbjct: 61 GCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKDKRIQELTIELRNKKRL 120
Query: 131 CATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFEPIEELL 173
CA Y+EQL +F KIVEEHS++++ K+ ++VNNLKEFE +E L
Sbjct: 121 CAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEHAL 163
>gb|AAO50616.1| unknown protein [Arabidopsis thaliana] gi|28393276|gb|AAO42066.1|
unknown protein [Arabidopsis thaliana]
gi|30680320|ref|NP_187406.2| far-red impaired responsive
family protein / FAR1 family protein [Arabidopsis
thaliana]
Length = 217
Score = 171 bits (432), Expect = 1e-41
Identities = 89/173 (51%), Positives = 122/173 (70%), Gaps = 7/173 (4%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
MEFESE+AAK FYD YA +GFVMRV + RRS RDG ++ RRL CNKEG R +
Sbjct: 37 MEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGF-RRSRPRRSE 95
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLV-VSPREAR-----QTMDEKD 114
R+PRA TREGCKA+I +K +KSG W++TKF K+HNHPL+ +SP R QT DEKD
Sbjct: 96 SRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKD 155
Query: 115 KKIQELTAEIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFE 167
KI+EL+AE+ ++R C Q+QL +K +EEHS+ L++ I+ ++ ++++ E
Sbjct: 156 AKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIE 208
>gb|AAF02154.1| hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 166 bits (421), Expect = 2e-40
Identities = 86/168 (51%), Positives = 119/168 (70%), Gaps = 8/168 (4%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
MEFESE+AAK FYD YA +GFVMRV + RRS RDG ++ RRL CNKEG R +
Sbjct: 45 MEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGF-RRSRPRRSE 103
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLV-VSPREARQTMDEKDKKIQE 119
R+PRA TREGCKA+I +K +KSG W++TKF K+HNHPL+ +SP DEKD KI+E
Sbjct: 104 SRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPN------DEKDAKIRE 157
Query: 120 LTAEIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFE 167
L+AE+ ++R C Q+QL +K +EEHS+ L++ I+ ++ ++++ E
Sbjct: 158 LSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIE 205
>emb|CAB78327.1| putative protein [Arabidopsis thaliana] gi|4586261|emb|CAB41002.1|
putative protein [Arabidopsis thaliana]
gi|15235502|ref|NP_193021.1| far-red impaired responsive
family protein / FAR1 family protein [Arabidopsis
thaliana] gi|7487270|pir||T06643 hypothetical protein
T20K18.200 - Arabidopsis thaliana
Length = 183
Score = 159 bits (403), Expect = 2e-38
Identities = 80/167 (47%), Positives = 117/167 (69%), Gaps = 4/167 (2%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
++FESE+ AK FY EY++ +GFV+R+M RRS DGR LARRLGCNK+G N + S
Sbjct: 14 LKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQRSSSS 73
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQEL 120
+S+REGCKA I +K +KSGKWV+T+F+K+HNH L + + +K++KI+EL
Sbjct: 74 ----SSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDSFADKERKIKEL 129
Query: 121 TAEIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFE 167
T EI + RLC Y+++L SF+ VE ++++LS+K+ IV N+K+ E
Sbjct: 130 TEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLE 176
>emb|CAB75444.1| putative protein [Arabidopsis thaliana] gi|11358055|pir||T49288
hypothetical protein T16L24.20 - Arabidopsis thaliana
Length = 275
Score = 142 bits (359), Expect = 3e-33
Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 2 EFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGSI 61
EFESE AA FY+ YA VGFV+RV RS DG + R+L CNKEG+ + K +
Sbjct: 73 EFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGY--RLPSKRDKV 130
Query: 62 RRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREAR------QTMDEKDK 115
R RA TR GCKAMI I+ + SGKWVITKFVK+HNH L+ P R Q +E D
Sbjct: 131 IRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM--PGRVRRGCIYDQYPNEHD- 187
Query: 116 KIQELTAEIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFE 167
KIQEL ++ +K+ ATY+ L + +E+H++ LS +I HIV+N++ E
Sbjct: 188 KIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLE 239
>gb|AAN12913.1| At3g59470/T16L24_20 [Arabidopsis thaliana]
gi|16604382|gb|AAL24197.1| AT3g59470/T16L24_20
[Arabidopsis thaliana] gi|18411179|ref|NP_567085.1|
far-red impaired responsive family protein / FAR1 family
protein [Arabidopsis thaliana]
Length = 251
Score = 142 bits (359), Expect = 3e-33
Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 2 EFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGSI 61
EFESE AA FY+ YA VGFV+RV RS DG + R+L CNKEG+ + K +
Sbjct: 75 EFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGY--RLPSKRDKV 132
Query: 62 RRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREAR------QTMDEKDK 115
R RA TR GCKAMI I+ + SGKWVITKFVK+HNH L+ P R Q +E D
Sbjct: 133 IRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM--PGRVRRGCIYDQYPNEHD- 189
Query: 116 KIQELTAEIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKEFE 167
KIQEL ++ +K+ ATY+ L + +E+H++ LS +I HIV+N++ E
Sbjct: 190 KIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLE 241
>gb|AAS88777.1| At4g12850 [Arabidopsis thaliana] gi|45476551|gb|AAS65941.1|
At4g12850 [Arabidopsis thaliana]
Length = 138
Score = 111 bits (278), Expect = 8e-24
Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 4/99 (4%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
++FESE+ AK FY EY++ +GFV+R+M RRS DGR LARRLGCNK+G N + S
Sbjct: 15 LKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQRSSSS 74
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPL 99
+S+REGCKA I +K +KSGKWV+T+F+K+HNH L
Sbjct: 75 ----SSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL 109
>emb|CAB80483.1| hypothetical protein [Arabidopsis thaliana]
gi|4467124|emb|CAB37558.1| hypothetical protein
[Arabidopsis thaliana] gi|22531237|gb|AAM97122.1|
unknown protein [Arabidopsis thaliana]
gi|15233732|ref|NP_195531.1| far-red impaired responsive
protein, putative [Arabidopsis thaliana]
gi|7485859|pir||T05645 hypothetical protein F20D10.300 -
Arabidopsis thaliana
Length = 788
Score = 111 bits (277), Expect = 1e-23
Identities = 56/102 (54%), Positives = 69/102 (66%), Gaps = 2/102 (1%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEG--HCLNIRGKL 58
+EFESE+AAK FY+ YAR +GF RV S RRS RDG I+ R+ C KEG + R K
Sbjct: 77 LEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKD 136
Query: 59 GSIRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLV 100
I+RPR TR GCKA + +K SGKW+++ FVKDHNH LV
Sbjct: 137 REIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178
Score = 43.5 bits (101), Expect = 0.003
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 111 DEKDKKIQELTAEIRIKKRLCATYQEQLSSFMKIVEEHSDKLSVKIHHIVNNLKE 165
DE DKKI +L E+ + R C Y+ L S +K +E+ ++S+K+ +I +LK+
Sbjct: 732 DEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKD 786
>ref|XP_469570.1| putative transposase [Oryza sativa (japonica cultivar-group)]
gi|28301931|gb|AAO38824.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 760
Score = 99.4 bits (246), Expect = 4e-20
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
MEFESE+AAKVFY YA VGF +R+ RRS D I+ RR C+KEG + G
Sbjct: 31 MEFESEEAAKVFYMAYASRVGFSVRISKSRRSRNDESIIMRRFVCSKEGFHHKKQTDTGK 90
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQ 118
+R RA REGC AMI + G+WV+ K +K+HNH V +P R E+ +++
Sbjct: 91 RKRKRAIIREGCHAMIEVSQKYYGRWVVIKLIKEHNH-AVAAPSIVRYVAPEEYAQLE 147
Score = 68.9 bits (167), Expect = 6e-11
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
MEF S ++A+ FY YA +GF +R+ RRS +D + RR C +EG
Sbjct: 152 MEFPSYESAQTFYYAYASRMGFDVRIRLSRRSPKDETFVMRRFVCTREG-ATPCEENENR 210
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQEL 120
+R R REGC+AM I KWV++K H H L P + + +
Sbjct: 211 RKRNRGVPREGCQAMFEIVKKDQDKWVVSKLFLAHTHELANVPNKVHYIQSNSEVVVLAK 270
Query: 121 TAEIR 125
++ +R
Sbjct: 271 SSVLR 275
>gb|AAT78829.1| putative FAR1 protein [Oryza sativa (japonica cultivar-group)]
Length = 1066
Score = 90.9 bits (224), Expect = 1e-17
Identities = 51/113 (45%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGK--- 57
MEF+ E+ A FY+ YA VGF R+ RS RDG I++R+ C KEG RGK
Sbjct: 72 MEFDDEEDAWTFYNVYAHRVGFSTRISVMHRSRRDGSIMSRQFVCAKEGF-RTYRGKNEV 130
Query: 58 ----------LGSIRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLV 100
G RR RA TR GCKAMI +K +G+W +TK HNHPLV
Sbjct: 131 SPVAAGSGEDSGRGRRTRAVTRVGCKAMIRVKKQDNGRWAVTKLETAHNHPLV 183
>gb|AAL73980.1| putative far-red impaired response protein [Sorghum bicolor]
Length = 1142
Score = 88.6 bits (218), Expect = 7e-17
Identities = 50/115 (43%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKL-- 58
MEF+ E+ A FY+ YA VGF R+ RS RDG +++R+ C KEG RGK
Sbjct: 77 MEFDDEEDAWTFYNVYAHRVGFSTRISVMHRSRRDGSVMSRQFVCAKEGF-RTYRGKNEV 135
Query: 59 -------------GSIRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLV 100
G RR RA TR GCKAMI +K +G+W +TK HNHPLV
Sbjct: 136 SRADAVDPGDDDGGRGRRTRAVTRVGCKAMIRVKKQDNGRWSVTKLETAHNHPLV 190
>dbj|BAD94730.1| Mutator-like transposase [Arabidopsis thaliana]
Length = 644
Score = 86.7 bits (213), Expect = 3e-16
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
M+FES++AA FY EYAR VGF + + + RRS+R G+ + ++ C++ G R K +
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 98
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQEL 120
I PR+ + GCKA +H+K + KWVI FVK+HNH + P + ++ K+K
Sbjct: 99 I-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKP---- 151
Query: 121 TAEIRIKKRL-CATYQEQLSSFMKIVEEHSDK 151
+ IKK L A +E L ++ E DK
Sbjct: 152 AGALAIKKGLQLALEEEDLKLLLEHFMEMQDK 183
>gb|AAC69951.1| Mutator-like transposase [Arabidopsis thaliana]
gi|25408223|pir||G84730 Mutator-like transposase
[imported] - Arabidopsis thaliana
Length = 684
Score = 86.7 bits (213), Expect = 3e-16
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
M+FES++AA FY EYAR VGF + + + RRS+R G+ + ++ C++ G R K +
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 98
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQEL 120
I PR+ + GCKA +H+K + KWVI FVK+HNH + P + ++ K+K
Sbjct: 99 I-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKP---- 151
Query: 121 TAEIRIKKRL-CATYQEQLSSFMKIVEEHSDK 151
+ IKK L A +E L ++ E DK
Sbjct: 152 AGALAIKKGLQLALEEEDLKLLLEHFMEMQDK 183
>ref|NP_180784.2| far-red impaired responsive protein, putative [Arabidopsis
thaliana]
Length = 807
Score = 86.7 bits (213), Expect = 3e-16
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
M+FES++AA FY EYAR VGF + + + RRS+R G+ + ++ C++ G R K +
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 98
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQEL 120
I PR+ + GCKA +H+K + KWVI FVK+HNH + P + ++ K+K
Sbjct: 99 I-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKP---- 151
Query: 121 TAEIRIKKRL-CATYQEQLSSFMKIVEEHSDK 151
+ IKK L A +E L ++ E DK
Sbjct: 152 AGALAIKKGLQLALEEEDLKLLLEHFMEMQDK 183
>ref|NP_973580.1| far-red impaired responsive protein, putative [Arabidopsis
thaliana]
Length = 805
Score = 86.7 bits (213), Expect = 3e-16
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
M+FES++AA FY EYAR VGF + + + RRS+R G+ + ++ C++ G R K +
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 98
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQEL 120
I PR+ + GCKA +H+K + KWVI FVK+HNH + P + ++ K+K
Sbjct: 99 I-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKP---- 151
Query: 121 TAEIRIKKRL-CATYQEQLSSFMKIVEEHSDK 151
+ IKK L A +E L ++ E DK
Sbjct: 152 AGALAIKKGLQLALEEEDLKLLLEHFMEMQDK 183
>ref|NP_912635.1| Putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|20219041|gb|AAM15785.1| Putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 611
Score = 80.5 bits (197), Expect = 2e-14
Identities = 49/127 (38%), Positives = 64/127 (49%), Gaps = 7/127 (5%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNI-RGKLG 59
M+F SED FY++YA+ GF +R RR G I +R C++EG + G
Sbjct: 20 MKFSSEDEGFAFYNQYAKEKGFSVRKDYSRRDRFSGLIFHKRFTCSREGFRKEVYMDYSG 79
Query: 60 SIRRPRASTREGCKAMIHIKYDK-SGKWVITKFVKDHNHPL-----VVSPREARQTMDEK 113
R PRA T GC A IK D+ G W +T+FV DHNHPL V R R+ +
Sbjct: 80 RTREPRALTHCGCNAHFEIKLDEIKGHWYVTRFVADHNHPLCKADEVAFLRSHRRITPAQ 139
Query: 114 DKKIQEL 120
K+ EL
Sbjct: 140 QAKLVEL 146
>gb|AAX94831.1| transposon protein, putative, unclassified [Oryza sativa (japonica
cultivar-group)]
Length = 1023
Score = 79.7 bits (195), Expect = 3e-14
Identities = 44/101 (43%), Positives = 57/101 (55%), Gaps = 2/101 (1%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
M+F SE FY++YAR GF +R CRR G I+ RR C++EG + + +
Sbjct: 581 MKFPSELHGFQFYNKYARERGFSVRKDYCRRDRFSGIIIHRRFTCSREGFRKELYMDVSN 640
Query: 61 -IRRPRASTREGCKAMIHIK-YDKSGKWVITKFVKDHNHPL 99
R P+A TR GCKA IK Y K G W + +FV HNHPL
Sbjct: 641 RSREPQALTRCGCKAQFEIKLYQKEGNWYVVRFVSKHNHPL 681
>gb|AAX92763.1| transposon protein, putative, unclassified [Oryza sativa (japonica
cultivar-group)]
Length = 1185
Score = 79.7 bits (195), Expect = 3e-14
Identities = 44/101 (43%), Positives = 57/101 (55%), Gaps = 2/101 (1%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
M+F SE FY++YAR GF +R CRR G I+ RR C++EG + + +
Sbjct: 581 MKFPSELHGFQFYNKYARERGFSVRKDYCRRDRFSGIIIHRRFTCSREGFRKELYMDVSN 640
Query: 61 -IRRPRASTREGCKAMIHIK-YDKSGKWVITKFVKDHNHPL 99
R P+A TR GCKA IK Y K G W + +FV HNHPL
Sbjct: 641 RSREPQALTRCGCKAQFEIKLYQKEGNWYVVRFVSKHNHPL 681
>gb|AAQ62876.1| At1g76320 [Arabidopsis thaliana] gi|62320160|dbj|BAD94369.1|
putative phytochrome A signaling protein [Arabidopsis
thaliana]
Length = 732
Score = 79.3 bits (194), Expect = 4e-14
Identities = 46/142 (32%), Positives = 74/142 (51%), Gaps = 7/142 (4%)
Query: 1 MEFESEDAAKVFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCLNIRGKLGS 60
MEFE+ + A +FY +YA+ VGF +S RRS + + C + G + +
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGS----KQQSDD 56
Query: 61 IRRPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKK-IQE 119
PRAS + GCKA +H+K GKW + FVK+HNH L+ P +A ++ + ++
Sbjct: 57 AINPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL--PEQAHYFRSHRNTELVKS 114
Query: 120 LTAEIRIKKRLCATYQEQLSSF 141
+ +R KK T + LS++
Sbjct: 115 NDSRLRRKKNTPLTDCKHLSAY 136
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 279,737,525
Number of Sequences: 2540612
Number of extensions: 10381293
Number of successful extensions: 38224
Number of sequences better than 10.0: 213
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 37927
Number of HSP's gapped (non-prelim): 296
length of query: 176
length of database: 863,360,394
effective HSP length: 119
effective length of query: 57
effective length of database: 561,027,566
effective search space: 31978571262
effective search space used: 31978571262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0083.5