BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0083.16
(294 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN41273.1| putative RNA-binding protein [Arabidopsis thalian... 421 e-116
emb|CAB79503.1| putative protein [Arabidopsis thaliana] gi|29824... 419 e-116
gb|AAM14070.1| unknown protein [Arabidopsis thaliana] 417 e-115
gb|AAL87326.1| putative RNA-binding protein [Arabidopsis thaliana] 399 e-110
ref|XP_467536.1| putative KH domain protein [Oryza sativa (japon... 383 e-105
dbj|BAD82121.1| QUAKING isoform 5-like [Oryza sativa (japonica c... 314 2e-84
gb|AAV25646.1| unknown protein [Oryza sativa (japonica cultivar-... 305 8e-82
gb|AAR01750.1| expressed protein [Oryza sativa (japonica cultiva... 282 7e-75
dbj|BAD06470.1| hypothetical protein [Nicotiana tabacum] 282 9e-75
dbj|BAC42103.1| unknown protein [Arabidopsis thaliana] gi|306805... 280 5e-74
gb|AAG51340.1| unknown protein; 28504-31237 [Arabidopsis thaliana] 280 5e-74
ref|NP_911570.1| KH domain-like protein [Oryza sativa (japonica ... 278 1e-73
gb|AAN15403.1| putative RNA-binding protein [Arabidopsis thalian... 268 2e-70
ref|XP_463561.1| P0408G07.16 [Oryza sativa (japonica cultivar-gr... 267 3e-70
dbj|BAC43277.1| putative elongation factor [Arabidopsis thaliana... 262 1e-68
gb|AAL84995.1| At1g09660/F21M12_5 [Arabidopsis thaliana] gi|1693... 261 2e-68
dbj|BAD73347.1| putative QUAKING isoform 5 [Oryza sativa (japoni... 252 8e-66
ref|NP_915982.1| P0454H12.18 [Oryza sativa (japonica cultivar-gr... 245 1e-63
ref|NP_973800.1| KH domain-containing quaking protein, putative ... 216 8e-55
pir||D86230 hypothetical protein [imported] - Arabidopsis thalia... 200 5e-50
>gb|AAN41273.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|9758634|dbj|BAB09296.1| RNA-binding protein-like
[Arabidopsis thaliana] gi|15241136|ref|NP_200425.1| KH
domain-containing protein [Arabidopsis thaliana]
Length = 315
Score = 421 bits (1082), Expect = e-116
Identities = 216/296 (72%), Positives = 245/296 (81%), Gaps = 7/296 (2%)
Query: 2 MSSSGAGRYMAFPPS----PSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFM 57
+ G GR+M + S PSAP SP+ SG + SS EQ+KYL+ELL ERH L PF+
Sbjct: 21 IGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFL 80
Query: 58 AVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQS 117
VLPH +RL+NQEILRVTTLL NA+VL QS L+H SPLA+GGIF N AD+NGWAS+F S
Sbjct: 81 PVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPS 140
Query: 118 EMPSLLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVE 177
E + SS P+WL+ GSSSGL+ K+T+RVDIPV+ YPNFNFVGRLLGPRGNSLKRVE
Sbjct: 141 ERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVE 198
Query: 178 ASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREI 237
ASTDCRVLIRGRGSIKDP KEEMMRGKPGYEHLNEPLH+LVEAE P EI+DARLMQAREI
Sbjct: 199 ASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREI 258
Query: 238 LEDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTR 293
L+DLL P++E+ D YKKQQLRELALLNGTLREEGSPMSGSVSP+ NSLGMKRAKTR
Sbjct: 259 LDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313
>emb|CAB79503.1| putative protein [Arabidopsis thaliana] gi|2982458|emb|CAA18222.1|
putative protein [Arabidopsis thaliana]
gi|15236738|ref|NP_194378.1| KH domain-containing
protein [Arabidopsis thaliana] gi|7486790|pir||T05056
hypothetical protein M3E9.90 - Arabidopsis thaliana
Length = 555
Score = 419 bits (1078), Expect = e-116
Identities = 215/294 (73%), Positives = 246/294 (83%), Gaps = 9/294 (3%)
Query: 5 SGAGRYMAFPPS----PSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVL 60
SG GR++ +PP PSAP SP+ SG + S L EQ+KYL+ELL ERH L PF+ VL
Sbjct: 267 SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVL 326
Query: 61 PHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQSEMP 120
PH RL+NQEILRVTTLL NA L QSR +H SPLA+GGIF N AD+NGWAS+F SE
Sbjct: 327 PHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS 384
Query: 121 SLLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEAST 180
+ SS P+WL+ GSSSGL+VK+T+RVDIPV+ YPN+NFVGRLLGPRGNSLKRVEAST
Sbjct: 385 --VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 442
Query: 181 DCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILED 240
DCRVLIRGRGSIKDP KE+MMRGKPGYEHLNEPLH+LVEAE P EI+DARLMQAREIL+D
Sbjct: 443 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 502
Query: 241 LLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 294
LL PV+E+ D+YKKQQLRELALLNG+LREEGSPMSGS+SP+ NSLGMKRAKTRG
Sbjct: 503 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 555
>gb|AAM14070.1| unknown protein [Arabidopsis thaliana]
Length = 308
Score = 417 bits (1072), Expect = e-115
Identities = 214/293 (73%), Positives = 245/293 (83%), Gaps = 9/293 (3%)
Query: 5 SGAGRYMAFPPS----PSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVL 60
SG GR++ +PP PSAP SP+ SG + S L EQ+KYL+ELL ERH L PF+ VL
Sbjct: 20 SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVL 79
Query: 61 PHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQSEMP 120
PH RL+NQEILRVTTLL NA L QSR +H SPLA+GGIF N AD+NGWAS+F SE
Sbjct: 80 PHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS 137
Query: 121 SLLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEAST 180
+ SS P+WL+ GSSSGL+VK+T+RVDIPV+ YPN+NFVGRLLGPRGNSLKRVEAST
Sbjct: 138 --VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 195
Query: 181 DCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILED 240
DCRVLIRGRGSIKDP KE+MMRGKPGYEHLNEPLH+LVEAE P EI+DARLMQAREIL+D
Sbjct: 196 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 255
Query: 241 LLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTR 293
LL PV+E+ D+YKKQQLRELALLNG+LREEGSPMSGS+SP+ NSLGMKRAKTR
Sbjct: 256 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTR 307
>gb|AAL87326.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 260
Score = 399 bits (1026), Expect = e-110
Identities = 202/261 (77%), Positives = 227/261 (86%), Gaps = 3/261 (1%)
Query: 33 SSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHA 92
SS EQ+KYL+ELL ERH L PF+ VLPH +RL+NQEILRVTTLL NA+VL QS L+H
Sbjct: 1 SSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHP 60
Query: 93 SPLATGGIFSNGGADVNGWASRFQSEMPSLLQSSATPSWLSPQGSSSGLVVKKTMRVDIP 152
SPLA+GGIF N AD+NGWAS+F SE + SS P+WL+ GSSSGL+ K+T+RVDIP
Sbjct: 61 SPLASGGIFQNARADMNGWASQFPSERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIP 118
Query: 153 VEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNE 212
V+ YPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP KEEMMRGKPGYEHLNE
Sbjct: 119 VDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNE 178
Query: 213 PLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEGS 272
PLH+LVEAE P EI++ARLMQAREIL+DLL P++E+ D YKKQQLRELALLNGTLREEGS
Sbjct: 179 PLHILVEAELPIEIVNARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGS 238
Query: 273 PMSGSVSPFHNSLGMKRAKTR 293
PMSGSVSP+ NSLGMKRAKTR
Sbjct: 239 PMSGSVSPY-NSLGMKRAKTR 258
>ref|XP_467536.1| putative KH domain protein [Oryza sativa (japonica cultivar-group)]
gi|45735994|dbj|BAD13022.1| putative KH domain protein
[Oryza sativa (japonica cultivar-group)]
gi|45735990|dbj|BAD13019.1| putative KH domain protein
[Oryza sativa (japonica cultivar-group)]
Length = 341
Score = 383 bits (983), Expect = e-105
Identities = 195/256 (76%), Positives = 217/256 (84%), Gaps = 8/256 (3%)
Query: 41 KYLTELLGERHILGPFMAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGI 100
+YL ELL ERH L PF+ VLP+ RL+NQEILRV+TLL NAS+L QS LEH SPL TGG+
Sbjct: 92 RYLAELLAERHKLSPFIPVLPNSVRLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGL 151
Query: 101 FSNGGA-DVNGWASRFQSEMPSLLQSSATPSWLS-PQGSSSGLVVKKTMRVDIPVEVYPN 158
+SNG A D+NGW S FQSE S SW QGSSSGL+VKKTM+VDIPV+ YP
Sbjct: 152 YSNGAAADMNGWTSAFQSE------GSPAYSWRGGSQGSSSGLIVKKTMKVDIPVDKYPT 205
Query: 159 FNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLV 218
FNFVGR+LGPRGNSLKRVEA+TDCRVLIRGRGSIKDPA+E+MMRGKPGYEHLNEPLH+LV
Sbjct: 206 FNFVGRILGPRGNSLKRVEATTDCRVLIRGRGSIKDPAREDMMRGKPGYEHLNEPLHILV 265
Query: 219 EAEFPAEIIDARLMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSV 278
EAE P EIID RL+QAR+ILEDLLKPVDESQD++KKQQLRELA+LNGTLREEG SGS
Sbjct: 266 EAELPVEIIDTRLIQARDILEDLLKPVDESQDFFKKQQLRELAMLNGTLREEGMQRSGSA 325
Query: 279 SPFHNSLGMKRAKTRG 294
SPFHNSLGMKRAKTRG
Sbjct: 326 SPFHNSLGMKRAKTRG 341
>dbj|BAD82121.1| QUAKING isoform 5-like [Oryza sativa (japonica cultivar-group)]
gi|56784311|dbj|BAD82237.1| QUAKING isoform 5-like
[Oryza sativa (japonica cultivar-group)]
Length = 290
Score = 314 bits (805), Expect = 2e-84
Identities = 181/289 (62%), Positives = 212/289 (72%), Gaps = 17/289 (5%)
Query: 14 PPSP---SAPP---SPH-LSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRL 66
PPSP S P SPH LS LR ++S E+++YL ELL ER L PF+ VLP C RL
Sbjct: 7 PPSPLQYSPSPVHSSPHPLSSLRYSSS----ERERYLAELLAERQKLAPFVQVLPFCTRL 62
Query: 67 INQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGA-DVNGWASRFQSEMPSLLQS 125
+NQEILR ++L N + + R+EH SPL G+ NG D+ GW S Q+E +LQ+
Sbjct: 63 LNQEILRASSLPPNHNFVDPERIEHGSPLRLPGLPVNGQPMDLEGW-SGMQTENMRVLQA 121
Query: 126 SATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 185
S+ W P + VVKK +R+D+PV+ YPN+NFVGRLLGPRGNSLKRVEAST CRV
Sbjct: 122 SSM-GWNGPPAITGTPVVKKVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEASTQCRVY 180
Query: 186 IRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPV 245
IRGRGS+KD KE+ +R KPGYEHLNEPLHVLVEAEFPA+IID RL QA ILEDLLKP+
Sbjct: 181 IRGRGSVKDSVKEDKLRDKPGYEHLNEPLHVLVEAEFPADIIDTRLNQAVTILEDLLKPI 240
Query: 246 DESQDYYKKQQLRELALLNGTLREEG-SP-MSGSVSPFHNSLGMKRAKT 292
DES DYYKKQQLRELA+LNGTLREE SP +S SVSPF NS GMKRAKT
Sbjct: 241 DESMDYYKKQQLRELAILNGTLREESPSPHLSPSVSPF-NSTGMKRAKT 288
>gb|AAV25646.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 291
Score = 305 bits (782), Expect = 8e-82
Identities = 174/288 (60%), Positives = 203/288 (70%), Gaps = 13/288 (4%)
Query: 10 YMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQ 69
+ F PS + H S LRS AS E+++YL ELL ER L PFM VLP C RL+NQ
Sbjct: 10 FFQFLPSGAHSSPHHQSPLRSPAS----ERERYLAELLAERQKLAPFMQVLPFCNRLLNQ 65
Query: 70 EILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGA-DVNGWASRFQSEMPSLLQSSAT 128
EILR ++L N + + R+ H SPL G NG D+ GW S Q+EM L S +
Sbjct: 66 EILRASSLPPNPNFVEPERVNHGSPLRLTGHPMNGQPMDLEGW-SGMQTEMGVL--QSPS 122
Query: 129 PSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRG 188
W G + VVKK +R+D+PV+ YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG
Sbjct: 123 MGWNVAPGVAGSPVVKKVVRIDVPVDKYPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRG 182
Query: 189 RGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDES 248
RGS+KD KE+ +R KPGYEHLN+PLHVLVEAEFP++I+D RL QA ILEDLLKPVDES
Sbjct: 183 RGSVKDSVKEDKLRDKPGYEHLNDPLHVLVEAEFPSDIVDVRLNQAVAILEDLLKPVDES 242
Query: 249 QDYYKKQQLRELALLNGTLREEG-SP---MSGSVSPFHNSLGMKRAKT 292
DYYKKQQLRELA+LNGTLREE SP S SVSPF NS GMKRAKT
Sbjct: 243 MDYYKKQQLRELAILNGTLREESPSPHLSPSPSVSPF-NSTGMKRAKT 289
>gb|AAR01750.1| expressed protein [Oryza sativa (japonica cultivar-group)]
gi|50919389|ref|XP_470091.1| expressed protein [Oryza
sativa (japonica cultivar-group)]
Length = 281
Score = 282 bits (722), Expect = 7e-75
Identities = 154/280 (55%), Positives = 193/280 (68%), Gaps = 9/280 (3%)
Query: 16 SPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEILRVT 75
SP P+ +LS S+ +YL ELL E LGPFM VLP C +L++QEI+RV+
Sbjct: 6 SPGFSPARNLSP--QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVS 63
Query: 76 TLLGNASV--LGQSRLEHASPLATGGIFSN-GGADVNGWASRFQSEMPSLLQSSATPSWL 132
+++ N + R SP+++ SN G + W Q + + W
Sbjct: 64 SIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLG--FPQGTSMDWQ 121
Query: 133 SPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSI 192
S S VVKK +R+D+PV+ YPNFNFVGR+LGPRGNSLKRVEAST CRV IRG+GSI
Sbjct: 122 GAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSI 181
Query: 193 KDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDESQDYY 252
KDP KE+ +RGKPGYEHL++PLH+L+EAEFPA IIDARL A+E++E+LLKPVDESQD+Y
Sbjct: 182 KDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFY 241
Query: 253 KKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 292
K+QQLRELA+LN TLRE+ SP GSVSPF N GMKRAKT
Sbjct: 242 KRQQLRELAMLNSTLRED-SPHPGSVSPFSNG-GMKRAKT 279
>dbj|BAD06470.1| hypothetical protein [Nicotiana tabacum]
Length = 285
Score = 282 bits (721), Expect = 9e-75
Identities = 153/281 (54%), Positives = 194/281 (68%), Gaps = 13/281 (4%)
Query: 16 SPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEILRVT 75
SPS SP + +S+ + ++YL+ELL E +GPFM VLP C L+NQEILRV+
Sbjct: 12 SPSRAASPQIR-----SSNPDVDSNQYLSELLAEHQKVGPFMQVLPICSTLLNQEILRVS 66
Query: 76 TLLGNASVLGQ-SRLEH--ASPLATGGIFSN-GGADVNGWASRFQSEMPSLLQSSATPSW 131
+ N +LG+ R H +SP+A+ + SN GG + GW+ Q + + W
Sbjct: 67 GMTPN-QILGELDRFRHRSSSPMASANVMSNVGGTGLGGWSGLAQERLSG--PPGMSMDW 123
Query: 132 LSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 191
S S VK+ +R++IP+E YPNFNFVGRLLGPRGNSLK+VEA+T CRV IRGRGS
Sbjct: 124 HGAPASPSSYTVKRILRLEIPLETYPNFNFVGRLLGPRGNSLKQVEATTGCRVYIRGRGS 183
Query: 192 IKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDESQDY 251
IKDP +EE +RG PGYEHLNEPLH+L+EA+ PA I+D RL QA+EI+E+LLKPVDESQDY
Sbjct: 184 IKDPDQEENLRGIPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 243
Query: 252 YKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 292
K+QQL ELA+LN RE+ SGSVSPF NS G+KR KT
Sbjct: 244 IKRQQLHELAMLNSNFREDSPGPSGSVSPF-NSGGLKRPKT 283
>dbj|BAC42103.1| unknown protein [Arabidopsis thaliana] gi|30680583|ref|NP_187474.2|
KH domain-containing protein [Arabidopsis thaliana]
Length = 283
Score = 280 bits (715), Expect = 5e-74
Identities = 153/291 (52%), Positives = 190/291 (64%), Gaps = 14/291 (4%)
Query: 5 SGAGRYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCY 64
SG Y F PS +A P +R+ +S +Y+++LL E LGPFM VLP C
Sbjct: 2 SGLYNYNNFSPSRAASPQ-----IRTPSSDV---DSQYISQLLAEHQKLGPFMQVLPICS 53
Query: 65 RLINQEILRVTTLLGNASVLGQSRLEHASP--LATGGIFSN-GGADVNGWASRFQSEMPS 121
RL+NQEI R+T ++ N RL H SP +A+ + SN G + GW +
Sbjct: 54 RLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG 113
Query: 122 LLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTD 181
W S S VK+ +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T
Sbjct: 114 --PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTG 171
Query: 182 CRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDL 241
CRV IRG+GSIKDP KEE ++GKPGYEHLNE LH+L+EA+ P +I+D +L QA+EI+E+L
Sbjct: 172 CRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 231
Query: 242 LKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 292
+KPVDESQDY K+QQLRELALLN LRE SGSVSPF NS MKR KT
Sbjct: 232 VKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281
>gb|AAG51340.1| unknown protein; 28504-31237 [Arabidopsis thaliana]
Length = 319
Score = 280 bits (715), Expect = 5e-74
Identities = 153/291 (52%), Positives = 190/291 (64%), Gaps = 14/291 (4%)
Query: 5 SGAGRYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCY 64
SG Y F PS +A P +R+ +S +Y+++LL E LGPFM VLP C
Sbjct: 38 SGLYNYNNFSPSRAASPQ-----IRTPSSDV---DSQYISQLLAEHQKLGPFMQVLPICS 89
Query: 65 RLINQEILRVTTLLGNASVLGQSRLEHASP--LATGGIFSN-GGADVNGWASRFQSEMPS 121
RL+NQEI R+T ++ N RL H SP +A+ + SN G + GW +
Sbjct: 90 RLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG 149
Query: 122 LLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTD 181
W S S VK+ +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T
Sbjct: 150 --PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTG 207
Query: 182 CRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDL 241
CRV IRG+GSIKDP KEE ++GKPGYEHLNE LH+L+EA+ P +I+D +L QA+EI+E+L
Sbjct: 208 CRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 267
Query: 242 LKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 292
+KPVDESQDY K+QQLRELALLN LRE SGSVSPF NS MKR KT
Sbjct: 268 VKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 317
>ref|NP_911570.1| KH domain-like protein [Oryza sativa (japonica cultivar-group)]
gi|24060154|dbj|BAC21599.1| KH domain-like protein
[Oryza sativa (japonica cultivar-group)]
Length = 286
Score = 278 bits (711), Expect = 1e-73
Identities = 153/293 (52%), Positives = 190/293 (64%), Gaps = 16/293 (5%)
Query: 4 SSGAGRYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHC 63
S G + F P+ + P +RS + +YL+ELL E H LGPFM VLP C
Sbjct: 2 SGGLYNHQGFSPARTLSPQ-----IRSNPEA----DSQYLSELLAEHHKLGPFMQVLPIC 52
Query: 64 YRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNG---WASRFQSEM- 119
RL+NQEI+RV++++ + R + SP NG W Q +
Sbjct: 53 SRLLNQEIMRVSSMVNDHGFNDFDRRRYRSPSPMSSPIMRPNLHGNGFGPWNGIHQERLG 112
Query: 120 -PSLLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEA 178
P + W S +VKK +R+++PV+ YPNFNFVGR+LGPRGNSLKRVEA
Sbjct: 113 FPPPPPPGTSMDWQGAPPSHGSYIVKKIVRMEVPVDAYPNFNFVGRILGPRGNSLKRVEA 172
Query: 179 STDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREIL 238
ST CRV IRG+GSIKD KEE ++GKPGYEHLN+PLH+L+EAE PA IID RL QA+EI+
Sbjct: 173 STGCRVFIRGKGSIKDADKEEKLKGKPGYEHLNDPLHILIEAELPANIIDTRLRQAQEIM 232
Query: 239 EDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAK 291
++LLKPVDESQDYYK+QQLRELA+LN TLRE+ SP GSVSPF N GMKRAK
Sbjct: 233 DELLKPVDESQDYYKRQQLRELAMLNSTLRED-SPHPGSVSPFSNG-GMKRAK 283
>gb|AAN15403.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|3786011|gb|AAC67357.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|17978787|gb|AAL47387.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17473662|gb|AAL38288.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|14596033|gb|AAK68744.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|25408604|pir||B84807 probable RNA-binding protein
[imported] - Arabidopsis thaliana
gi|30687577|ref|NP_850296.1| KH domain-containing
protein [Arabidopsis thaliana]
gi|15224909|ref|NP_181395.1| KH domain-containing
protein [Arabidopsis thaliana]
Length = 286
Score = 268 bits (684), Expect = 2e-70
Identities = 151/283 (53%), Positives = 186/283 (65%), Gaps = 16/283 (5%)
Query: 16 SPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEILRVT 75
SP+ SP + SS +YLTELL E L PFM VLP C RL+NQE+ RV+
Sbjct: 12 SPARAASPQIRSTPEIDSS------QYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVS 65
Query: 76 TLLGNASVLGQSRLEHASP--LATGGIFSN-GGADVNGWASRFQSEMPSLLQSSATPSWL 132
++ N RL H SP +A+ + SN + GW Q + T W
Sbjct: 66 GMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGT--PGMTMDWQ 123
Query: 133 SPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSI 192
GS S VK+ +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSI
Sbjct: 124 GAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSI 183
Query: 193 KDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDESQDYY 252
KDP KE+ +RG+PGYEHLNE LH+L+EA+ PA I++ RL QA+EI+E+LLKPVDESQD+
Sbjct: 184 KDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFI 243
Query: 253 KKQQLRELALLN-GTLREE--GSPMSGSVSPFHNSLGMKRAKT 292
K+QQLRELALLN LREE G GSVSPF++S KR KT
Sbjct: 244 KRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284
>ref|XP_463561.1| P0408G07.16 [Oryza sativa (japonica cultivar-group)]
Length = 245
Score = 267 bits (682), Expect = 3e-70
Identities = 147/226 (65%), Positives = 172/226 (76%), Gaps = 6/226 (2%)
Query: 70 EILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGA-DVNGWASRFQSEMPSLLQSSAT 128
+ILR ++L N + + R+EH SPL G+ NG D+ GW S Q+E +LQ+S+
Sbjct: 21 QILRASSLPPNHNFVDPERIEHGSPLRLPGLPVNGQPMDLEGW-SGMQTENMRVLQASSM 79
Query: 129 PSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRG 188
W P + VVKK +R+D+PV+ YPN+NFVGRLLGPRGNSLKRVEAST CRV IRG
Sbjct: 80 -GWNGPPAITGTPVVKKVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRG 138
Query: 189 RGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDES 248
RGS+KD KE+ +R KPGYEHLNEPLHVLVEAEFPA+IID RL QA ILEDLLKP+DES
Sbjct: 139 RGSVKDSVKEDKLRDKPGYEHLNEPLHVLVEAEFPADIIDTRLNQAVTILEDLLKPIDES 198
Query: 249 QDYYKKQQLRELALLNGTLREEG-SP-MSGSVSPFHNSLGMKRAKT 292
DYYKKQQLRELA+LNGTLREE SP +S SVSPF NS GMKRAKT
Sbjct: 199 MDYYKKQQLRELAILNGTLREESPSPHLSPSVSPF-NSTGMKRAKT 243
>dbj|BAC43277.1| putative elongation factor [Arabidopsis thaliana]
gi|22329449|ref|NP_172437.2| KH domain-containing
quaking protein, putative [Arabidopsis thaliana]
gi|51971727|dbj|BAD44528.1| putative elongation factor
[Arabidopsis thaliana] gi|51971995|dbj|BAD44662.1|
putative elongation factor [Arabidopsis thaliana]
gi|51970676|dbj|BAD44030.1| putative elongation factor
[Arabidopsis thaliana] gi|51969734|dbj|BAD43559.1|
putative elongation factor [Arabidopsis thaliana]
gi|51968882|dbj|BAD43133.1| putative elongation factor
[Arabidopsis thaliana]
Length = 298
Score = 262 bits (669), Expect = 1e-68
Identities = 154/304 (50%), Positives = 203/304 (66%), Gaps = 21/304 (6%)
Query: 2 MSSSGAGRYMAFPP--SPSAPPSPHLSGLRSAASSAL---AEQDKYLTELLGERHILGPF 56
M SGAG ++A SP + LSG R++ + + +++++YLTELL ER LGPF
Sbjct: 1 MMESGAG-FVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPF 59
Query: 57 MAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQ 116
+ V+P+C RL+N EI RV+ S R EH SP + G +NG D+ GW S Q
Sbjct: 60 LQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQ 112
Query: 117 SEMPSLLQSSAT---PS---WLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRG 170
+E LQ ++ PS W+ G + +VKK +R+D+PV+ YP++NFVGR+LGPRG
Sbjct: 113 AEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRG 172
Query: 171 NSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDAR 230
NSLKRVE +T CRV IRGRGS+KD KEE ++GKPGYEHL EPLHVL+EAE P +II++R
Sbjct: 173 NSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSR 232
Query: 231 LMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEG-SP-MSGSVSPFHNSLGMK 288
L A LE LLKP+DES D+YK++QL+ELA LNGTLREE SP +S +SP + K
Sbjct: 233 LEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNSK 292
Query: 289 RAKT 292
RAKT
Sbjct: 293 RAKT 296
>gb|AAL84995.1| At1g09660/F21M12_5 [Arabidopsis thaliana]
gi|16930473|gb|AAL31922.1| At1g09660/F21M12_5
[Arabidopsis thaliana]
Length = 298
Score = 261 bits (666), Expect = 2e-68
Identities = 154/304 (50%), Positives = 202/304 (65%), Gaps = 21/304 (6%)
Query: 2 MSSSGAGRYMAFPP--SPSAPPSPHLSGLRSAASSAL---AEQDKYLTELLGERHILGPF 56
M SGAG ++A SP + LSG R++ + + +++ +YLTELL ER LGPF
Sbjct: 1 MMESGAG-FVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRKRYLTELLQERQKLGPF 59
Query: 57 MAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQ 116
+ V+P+C RL+N EI RV+ S R EH SP + G +NG D+ GW S Q
Sbjct: 60 LQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQ 112
Query: 117 SEMPSLLQSSAT---PS---WLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRG 170
+E LQ ++ PS W+ G + +VKK +R+D+PV+ YP++NFVGR+LGPRG
Sbjct: 113 AEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRG 172
Query: 171 NSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDAR 230
NSLKRVE +T CRV IRGRGS+KD KEE ++GKPGYEHL EPLHVL+EAE P +II++R
Sbjct: 173 NSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSR 232
Query: 231 LMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEG-SP-MSGSVSPFHNSLGMK 288
L A LE LLKP+DES D+YK++QL+ELA LNGTLREE SP +S +SP + K
Sbjct: 233 LEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNSK 292
Query: 289 RAKT 292
RAKT
Sbjct: 293 RAKT 296
>dbj|BAD73347.1| putative QUAKING isoform 5 [Oryza sativa (japonica cultivar-group)]
Length = 283
Score = 252 bits (644), Expect = 8e-66
Identities = 139/280 (49%), Positives = 178/280 (62%), Gaps = 24/280 (8%)
Query: 9 RYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLIN 68
R M+ P PPSP +G +YL ELL E+ +GPF+ VLP C RL+N
Sbjct: 15 RAMSPLPLVRPPPSPGAAG-------------QYLAELLQEQQKIGPFVQVLPICGRLLN 61
Query: 69 QEILRVTTLLGNASVLGQSRLEHASP-----LATGGIFSNGGADVNGWASRFQSEMPSLL 123
QEI+R++ ++ + V RL ASP L F G N W +
Sbjct: 62 QEIMRMSAIVSHLGVREHDRLPIASPNQMHPLPQVPNFCGNG--FNPWTGTLPEKNGF-- 117
Query: 124 QSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCR 183
T W S +VKK +R+++P + YP+FNF+GRLLGPRGNSLKRVEAST CR
Sbjct: 118 -PRGTMGWEGAAHDPS-YIVKKIVRLEVPTDAYPHFNFIGRLLGPRGNSLKRVEASTGCR 175
Query: 184 VLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLK 243
V IRG+GSIKDP KEE ++G+PGYEHL++P H+L+EAE PA++ID RL QA+EILEDLLK
Sbjct: 176 VFIRGKGSIKDPIKEEQLKGRPGYEHLSDPTHILIEAELPADVIDTRLAQAQEILEDLLK 235
Query: 244 PVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHN 283
PV+ESQD+ K+QQLRELA+LN T RE+ +GS SPF N
Sbjct: 236 PVEESQDFLKRQQLRELAVLNSTYREDSPHQNGSASPFSN 275
>ref|NP_915982.1| P0454H12.18 [Oryza sativa (japonica cultivar-group)]
Length = 291
Score = 245 bits (625), Expect = 1e-63
Identities = 139/288 (48%), Positives = 178/288 (61%), Gaps = 32/288 (11%)
Query: 9 RYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLIN 68
R M+ P PPSP +G +YL ELL E+ +GPF+ VLP C RL+N
Sbjct: 15 RAMSPLPLVRPPPSPGAAG-------------QYLAELLQEQQKIGPFVQVLPICGRLLN 61
Query: 69 QEILRVTTLLGNASVLGQSRLEHASP-----LATGGIFSNGGADVNGWASRFQSEMPSLL 123
QEI+R++ ++ + V RL ASP L F G N W +
Sbjct: 62 QEIMRMSAIVSHLGVREHDRLPIASPNQMHPLPQVPNFCGNG--FNPWTGTLPEKNGF-- 117
Query: 124 QSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCR 183
T W S +VKK +R+++P + YP+FNF+GRLLGPRGNSLKRVEAST CR
Sbjct: 118 -PRGTMGWEGAAHDPS-YIVKKIVRLEVPTDAYPHFNFIGRLLGPRGNSLKRVEASTGCR 175
Query: 184 VLIRGRGSIKDPAK--------EEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAR 235
V IRG+GSIKDP K EE ++G+PGYEHL++P H+L+EAE PA++ID RL QA+
Sbjct: 176 VFIRGKGSIKDPIKASLFVTFKEEQLKGRPGYEHLSDPTHILIEAELPADVIDTRLAQAQ 235
Query: 236 EILEDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHN 283
EILEDLLKPV+ESQD+ K+QQLRELA+LN T RE+ +GS SPF N
Sbjct: 236 EILEDLLKPVEESQDFLKRQQLRELAVLNSTYREDSPHQNGSASPFSN 283
>ref|NP_973800.1| KH domain-containing quaking protein, putative [Arabidopsis
thaliana]
Length = 264
Score = 216 bits (549), Expect = 8e-55
Identities = 128/267 (47%), Positives = 172/267 (63%), Gaps = 21/267 (7%)
Query: 2 MSSSGAGRYMAFPP--SPSAPPSPHLSGLRSAASSAL---AEQDKYLTELLGERHILGPF 56
M SGAG ++A SP + LSG R++ + + +++++YLTELL ER LGPF
Sbjct: 1 MMESGAG-FVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPF 59
Query: 57 MAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQ 116
+ V+P+C RL+N EI RV+ S R EH SP + G +NG D+ GW S Q
Sbjct: 60 LQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQ 112
Query: 117 SEMPSLLQSSAT---PS---WLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRG 170
+E LQ ++ PS W+ G + +VKK +R+D+PV+ YP++NFVGR+LGPRG
Sbjct: 113 AEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRG 172
Query: 171 NSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDAR 230
NSLKRVE +T CRV IRGRGS+KD KEE ++GKPGYEHL EPLHVL+EAE P +II++R
Sbjct: 173 NSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSR 232
Query: 231 LMQAREILEDLLKPVDESQDYYKKQQL 257
L A LE LLKP+ S Y+K +
Sbjct: 233 LEHAVHFLESLLKPMVHS--YHKSPNM 257
>pir||D86230 hypothetical protein [imported] - Arabidopsis thaliana
gi|2160160|gb|AAB60723.1| F21M12.5 gene product
[Arabidopsis thaliana]
Length = 163
Score = 200 bits (508), Expect = 5e-50
Identities = 99/153 (64%), Positives = 123/153 (79%), Gaps = 2/153 (1%)
Query: 142 VVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAKEEMM 201
+VKK +R+D+PV+ YP++NFVGR+LGPRGNSLKRVE +T CRV IRGRGS+KD KEE +
Sbjct: 9 IVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKL 68
Query: 202 RGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDESQDYYKKQQLRELA 261
+GKPGYEHL EPLHVL+EAE P +II++RL A LE LLKP+DES D+YK++QL+ELA
Sbjct: 69 KGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELA 128
Query: 262 LLNGTLREEG-SP-MSGSVSPFHNSLGMKRAKT 292
LNGTLREE SP +S +SP + KRAKT
Sbjct: 129 ALNGTLREESPSPSLSPCLSPSMSPFNSKRAKT 161
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 513,407,206
Number of Sequences: 2540612
Number of extensions: 22101023
Number of successful extensions: 81479
Number of sequences better than 10.0: 364
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 80783
Number of HSP's gapped (non-prelim): 541
length of query: 294
length of database: 863,360,394
effective HSP length: 127
effective length of query: 167
effective length of database: 540,702,670
effective search space: 90297345890
effective search space used: 90297345890
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0083.16