BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0082b.1
(122 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_931310.1| glycerophosphoryl diester phosphodiesterase, pe... 224 5e-58
ref|YP_068754.1| glycerophosphoryl diester phosphodiesterase [Ye... 223 1e-57
ref|NP_667741.1| periplasmic glycerophosphodiester phosphodieste... 223 1e-57
ref|YP_149896.1| glycerophosphoryl diester phosphodiesterase per... 219 9e-57
gb|AAG57370.1| glycerophosphodiester phosphodiesterase, periplas... 219 9e-57
emb|CAA40223.1| glycerophosphocholine phosphodiesterase [Escheri... 218 3e-56
ref|NP_708129.2| glycerophosphodiester phosphodiesterase [Shigel... 218 3e-56
gb|AAX66191.1| glycerophosphodiester phosphodiesterase, periplas... 218 3e-56
pdb|1YDY|B Chain B, Crystal Structure Of Periplasmic Glycerophos... 218 3e-56
ref|NP_804439.1| glycerophosphoryl diester phosphodiesterase per... 217 5e-56
ref|NP_754666.1| Glycerophosphoryl diester phosphodiesterase, pe... 217 6e-56
pdb|1T8Q|D Chain D, Structural Genomics, Crystal Structure Of Gl... 210 7e-54
emb|CAG77064.1| glycerophosphoryl diester phosphodiesterase, per... 202 2e-51
ref|ZP_00143859.1| Glycerophosphoryl diester phosphodiesterase [... 197 6e-50
gb|AAL94007.1| Glycerophosphoryl diester phosphodiesterase [Fuso... 197 6e-50
ref|ZP_00132404.2| COG0584: Glycerophosphoryl diester phosphodie... 192 2e-48
ref|ZP_00123591.1| COG0584: Glycerophosphoryl diester phosphodie... 192 2e-48
gb|AAK03528.1| GlpQ [Pasteurella multocida subsp. multocida str.... 189 2e-47
gb|AAU38599.1| UgpQ protein [Mannheimia succiniciproducens MBEL5... 186 9e-47
ref|NP_438849.1| glycerophosphoryl diester phosphodiesterase [Ha... 184 6e-46
>ref|NP_931310.1| glycerophosphoryl diester phosphodiesterase, periplasmic precursor
(glycerophosphodiester phosphodiesterase) [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36787401|emb|CAE16492.1| glycerophosphoryl diester
phosphodiesterase, periplasmic precursor
(glycerophosphodiester phosphodiesterase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 358
Score = 224 bits (570), Expect = 5e-58
Identities = 102/122 (83%), Positives = 112/122 (91%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLN STGKNIGIYPEIKAPWFH++EGKDIS+KVLAVLK YGYT K+D +YLQC
Sbjct: 146 EEIEFVQGLNKSTGKNIGIYPEIKAPWFHQKEGKDISTKVLAVLKAYGYTKKSDKIYLQC 205
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIKNELEPKLGMDLKLVQLIAY DW ETYE+++DGKW Y YDWMFKPGAMK+
Sbjct: 206 FDTNELKRIKNELEPKLGMDLKLVQLIAYTDWNETYEKQSDGKWTNYSYDWMFKPGAMKE 265
Query: 121 IA 122
+A
Sbjct: 266 VA 267
>ref|YP_068754.1| glycerophosphoryl diester phosphodiesterase [Yersinia
pseudotuberculosis IP 32953] gi|51587845|emb|CAH19448.1|
glycerophosphoryl diester phosphodiesterase [Yersinia
pseudotuberculosis IP 32953] gi|15981742|emb|CAC93295.1|
glycerophosphoryl diester phosphodiesterase [Yersinia
pestis CO92] gi|16123962|ref|NP_407275.1|
glycerophosphoryl diester phosphodiesterase [Yersinia
pestis CO92] gi|25514247|pir||AC0466
glycerophosphodiester phosphodiesterase (EC 3.1.4.46)
[imported] - Yersinia pestis (strain CO92)
Length = 371
Score = 223 bits (567), Expect = 1e-57
Identities = 101/122 (82%), Positives = 110/122 (89%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEF+QGLNHSTGKN GIYPEIKAPWFH QEGKDIS+KVL VLK+YGYT K+D VYLQ
Sbjct: 159 EEIEFIQGLNHSTGKNTGIYPEIKAPWFHHQEGKDISTKVLEVLKEYGYTNKDDKVYLQS 218
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIKNELEPK+GMDLKL+QLIAY DW ETYEQ DGKWV Y+YDWMFKPGAMK+
Sbjct: 219 FDVNELKRIKNELEPKMGMDLKLIQLIAYTDWNETYEQLPDGKWVNYNYDWMFKPGAMKE 278
Query: 121 IA 122
+A
Sbjct: 279 VA 280
>ref|NP_667741.1| periplasmic glycerophosphodiester phosphodiesterase [Yersinia
pestis KIM] gi|45442973|ref|NP_994512.1|
glycerophosphoryl diester phosphodiesterase [Yersinia
pestis biovar Medievalis str. 91001]
gi|45437840|gb|AAS63389.1| glycerophosphoryl diester
phosphodiesterase [Yersinia pestis biovar Medievalis
str. 91001] gi|21957092|gb|AAM83992.1| periplasmic
glycerophosphodiester phosphodiesterase [Yersinia pestis
KIM]
Length = 372
Score = 223 bits (567), Expect = 1e-57
Identities = 101/122 (82%), Positives = 110/122 (89%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEF+QGLNHSTGKN GIYPEIKAPWFH QEGKDIS+KVL VLK+YGYT K+D VYLQ
Sbjct: 160 EEIEFIQGLNHSTGKNTGIYPEIKAPWFHHQEGKDISTKVLEVLKEYGYTNKDDKVYLQS 219
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIKNELEPK+GMDLKL+QLIAY DW ETYEQ DGKWV Y+YDWMFKPGAMK+
Sbjct: 220 FDVNELKRIKNELEPKMGMDLKLIQLIAYTDWNETYEQLPDGKWVNYNYDWMFKPGAMKE 279
Query: 121 IA 122
+A
Sbjct: 280 VA 281
>ref|YP_149896.1| glycerophosphoryl diester phosphodiesterase periplasmic precursor
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150] gi|56127078|gb|AAV76584.1|
glycerophosphoryl diester phosphodiesterase periplasmic
precursor [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150] gi|16420821|gb|AAL21183.1|
periplasmic glycerophosphodiester phosphodiesterase
[Salmonella typhimurium LT2]
gi|16765609|ref|NP_461224.1| periplasmic
glycerophosphodiester phosphodiesterase [Salmonella
typhimurium LT2]
Length = 356
Score = 219 bits (559), Expect = 9e-57
Identities = 99/122 (81%), Positives = 110/122 (90%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK DNVYLQC
Sbjct: 147 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKQDNVYLQC 206
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD ELKRIKNELEPK+GMDL LVQLIAY DW ET +++ DG+WV Y+YDWMFKPGAMK+
Sbjct: 207 FDVAELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQ 266
Query: 121 IA 122
+A
Sbjct: 267 VA 268
>gb|AAG57370.1| glycerophosphodiester phosphodiesterase, periplasmic [Escherichia
coli O157:H7 EDL933] gi|13362594|dbj|BAB36547.1|
glycerophosphodiester phosphodiesterase [Escherichia
coli O157:H7] gi|25518224|pir||F85863
glycerophosphodiester phosphodiesterase [imported] -
Escherichia coli (strain O157:H7, substrain EDL933)
gi|25391132|pir||D91019 glycerophosphodiester
phosphodiesterase [imported] - Escherichia coli (strain
O157:H7, substrain RIMD 0509952)
gi|15832378|ref|NP_311151.1| glycerophosphodiester
phosphodiesterase [Escherichia coli O157:H7]
gi|15802788|ref|NP_288815.1| glycerophosphodiester
phosphodiesterase, periplasmic [Escherichia coli O157:H7
EDL933]
Length = 358
Score = 219 bits (559), Expect = 9e-57
Identities = 99/122 (81%), Positives = 111/122 (90%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK+D VYLQC
Sbjct: 150 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQC 209
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FDA+ELKRIKNELEPK+GMDL LVQLIAY DW ET +++ DG WV Y+YDWMFKPGAMK+
Sbjct: 210 FDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQ 269
Query: 121 IA 122
+A
Sbjct: 270 VA 271
>emb|CAA40223.1| glycerophosphocholine phosphodiesterase [Escherichia coli]
gi|1788572|gb|AAC75299.1| glycerophosphodiester
phosphodiesterase, periplasmic [Escherichia coli K12]
gi|16130174|ref|NP_416742.1| glycerophosphodiester
phosphodiesterase, periplasmic [Escherichia coli K12]
gi|121418|sp|P09394|GLPQ_ECOLI Glycerophosphoryl diester
phosphodiesterase precursor (Glycerophosphodiester
phosphodiesterase) gi|1799586|dbj|BAA16058.1|
glycerophosphodiester phosphodiesterase (EC 3.1.4.46)
precursor, periplasmic [Escherichia coli]
gi|227847|prf||1712315A glycerophosphoryl diester
esterase
Length = 358
Score = 218 bits (555), Expect = 3e-56
Identities = 98/122 (80%), Positives = 111/122 (90%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK+D VYLQC
Sbjct: 150 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQC 209
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FDA+ELKRIKNELEPK+GM+L LVQLIAY DW ET +++ DG WV Y+YDWMFKPGAMK+
Sbjct: 210 FDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQ 269
Query: 121 IA 122
+A
Sbjct: 270 VA 271
>ref|NP_708129.2| glycerophosphodiester phosphodiesterase [Shigella flexneri 2a str.
301] gi|56383623|gb|AAN43836.2| glycerophosphodiester
phosphodiesterase [Shigella flexneri 2a str. 301]
gi|30063673|ref|NP_837844.1| glycerophosphodiester
phosphodiesterase [Shigella flexneri 2a str. 2457T]
gi|30041928|gb|AAP17654.1| glycerophosphodiester
phosphodiesterase [Shigella flexneri 2a str. 2457T]
Length = 358
Score = 218 bits (555), Expect = 3e-56
Identities = 98/122 (80%), Positives = 111/122 (90%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK+D VYLQC
Sbjct: 150 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQC 209
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FDA+ELKRIKNELEPK+GM+L LVQLIAY DW ET +++ DG WV Y+YDWMFKPGAMK+
Sbjct: 210 FDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQ 269
Query: 121 IA 122
+A
Sbjct: 270 VA 271
>gb|AAX66191.1| glycerophosphodiester phosphodiesterase, periplasmic [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67] gi|62180855|ref|YP_217272.1|
glycerophosphodiester phosphodiesterase, periplasmic
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 356
Score = 218 bits (555), Expect = 3e-56
Identities = 98/122 (80%), Positives = 109/122 (89%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIK PWFH QEGKDI++K L VLK+YGYTGK DNVYLQC
Sbjct: 147 EEIEFVQGLNHSTGKNIGIYPEIKTPWFHHQEGKDIAAKTLEVLKKYGYTGKQDNVYLQC 206
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD ELKRIKNELEPK+GMDL LVQLIAY DW ET +++ DG+WV Y+YDWMFKPGAMK+
Sbjct: 207 FDVAELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQ 266
Query: 121 IA 122
+A
Sbjct: 267 VA 268
>pdb|1YDY|B Chain B, Crystal Structure Of Periplasmic Glycerophosphodiester
Phosphodiesterase From Escherichia Coli
gi|60594287|pdb|1YDY|A Chain A, Crystal Structure Of
Periplasmic Glycerophosphodiester Phosphodiesterase From
Escherichia Coli
Length = 356
Score = 218 bits (555), Expect = 3e-56
Identities = 98/122 (80%), Positives = 111/122 (90%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK+D VYLQC
Sbjct: 150 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQC 209
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FDA+ELKRIKNELEPK+GM+L LVQLIAY DW ET +++ DG WV Y+YDWMFKPGAMK+
Sbjct: 210 FDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQ 269
Query: 121 IA 122
+A
Sbjct: 270 VA 271
>ref|NP_804439.1| glycerophosphoryl diester phosphodiesterase periplasmic precursor
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|16503507|emb|CAD07514.1| glycerophosphoryl diester
phosphodiesterase periplasmic precursor [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136723|gb|AAO68288.1| glycerophosphoryl diester
phosphodiesterase periplasmic precursor [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|25517054|pir||AH0791 glycerophosphodiester
phosphodiesterase (EC 3.1.4.46) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16761208|ref|NP_456825.1| glycerophosphoryl diester
phosphodiesterase periplasmic precursor [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
Length = 356
Score = 217 bits (553), Expect = 5e-56
Identities = 98/122 (80%), Positives = 109/122 (89%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGY GK DNVYLQC
Sbjct: 147 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYIGKQDNVYLQC 206
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD ELKRIKNELEPK+GMDL LVQLIAY DW ET +++ DG+WV Y+YDWMFKPGAMK+
Sbjct: 207 FDVAELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGRWVNYNYDWMFKPGAMKQ 266
Query: 121 IA 122
+A
Sbjct: 267 VA 268
>ref|NP_754666.1| Glycerophosphoryl diester phosphodiesterase, periplasmic precursor
[Escherichia coli CFT073] gi|26109031|gb|AAN81234.1|
Glycerophosphoryl diester phosphodiesterase, periplasmic
precursor [Escherichia coli CFT073]
Length = 358
Score = 217 bits (552), Expect = 6e-56
Identities = 98/122 (80%), Positives = 110/122 (89%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK+D VYLQC
Sbjct: 150 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQC 209
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FDA+ELKRIKN LEPK+GMDL LVQLIAY DW ET +++ DG WV Y+YDWMFKPGAMK+
Sbjct: 210 FDADELKRIKNVLEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQ 269
Query: 121 IA 122
+A
Sbjct: 270 VA 271
>pdb|1T8Q|D Chain D, Structural Genomics, Crystal Structure Of
Glycerophosphoryl Diester Phosphodiesterase From E. Coli
gi|51247609|pdb|1T8Q|C Chain C, Structural Genomics,
Crystal Structure Of Glycerophosphoryl Diester
Phosphodiesterase From E. Coli gi|51247608|pdb|1T8Q|B
Chain B, Structural Genomics, Crystal Structure Of
Glycerophosphoryl Diester Phosphodiesterase From E. Coli
gi|51247607|pdb|1T8Q|A Chain A, Structural Genomics,
Crystal Structure Of Glycerophosphoryl Diester
Phosphodiesterase From E. Coli
Length = 336
Score = 210 bits (534), Expect = 7e-54
Identities = 95/122 (77%), Positives = 107/122 (86%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEFVQGLNHSTGKNIGIYPEIKAPWFH QEGKDI++K L VLK+YGYTGK+D VYLQC
Sbjct: 128 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQC 187
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FDA+ELKRIKNELEPK G +L LVQLIAY DW ET +++ DG WV Y+YDW FKPGA K+
Sbjct: 188 FDADELKRIKNELEPKXGXELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWXFKPGAXKQ 247
Query: 121 IA 122
+A
Sbjct: 248 VA 249
>emb|CAG77064.1| glycerophosphoryl diester phosphodiesterase, periplasmic precursor
[Erwinia carotovora subsp. atroseptica SCRI1043]
gi|50123087|ref|YP_052254.1| glycerophosphoryl diester
phosphodiesterase, periplasmic precursor [Erwinia
carotovora subsp. atroseptica SCRI1043]
Length = 361
Score = 202 bits (513), Expect = 2e-51
Identities = 91/122 (74%), Positives = 105/122 (85%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEF+QGLNHSTGKNIG+YPEIKAPWFH QEGKDI+ + L VLKQYGYT K+D V+LQ
Sbjct: 152 EEIEFIQGLNHSTGKNIGLYPEIKAPWFHHQEGKDIARETLTVLKQYGYTEKSDRVFLQS 211
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD ELKRIK EL+P++ MDLKL+QLIAY DW ETYE++ADG W Y+YDWM KPGAMK+
Sbjct: 212 FDVAELKRIKTELQPQMKMDLKLIQLIAYTDWHETYEKQADGSWANYNYDWMQKPGAMKQ 271
Query: 121 IA 122
IA
Sbjct: 272 IA 273
>ref|ZP_00143859.1| Glycerophosphoryl diester phosphodiesterase [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27887483|gb|EAA24569.1| Glycerophosphoryl diester
phosphodiesterase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 309
Score = 197 bits (500), Expect = 6e-50
Identities = 93/122 (76%), Positives = 101/122 (82%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEF+QGL STGK IGIYPEIKAPWFH Q GKDI+ L VLK+YGYT K+D VYLQ
Sbjct: 96 EEIEFIQGLEKSTGKKIGIYPEIKAPWFHHQNGKDIAKATLEVLKKYGYTKKSDMVYLQT 155
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK EL PK+GMDLKLVQLIAYNDW ET E+ +GKWV YDYDWMFK GAMK+
Sbjct: 156 FDYNELKRIKTELMPKMGMDLKLVQLIAYNDWHETEEKDKNGKWVNYDYDWMFKEGAMKE 215
Query: 121 IA 122
IA
Sbjct: 216 IA 217
>gb|AAL94007.1| Glycerophosphoryl diester phosphodiesterase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|19705213|ref|NP_602708.1| Glycerophosphoryl diester
phosphodiesterase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 357
Score = 197 bits (500), Expect = 6e-50
Identities = 93/122 (76%), Positives = 101/122 (82%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EEIEF+QGL STGK IGIYPEIKAPWFH Q GKDI+ L VLK+YGYT K+D VYLQ
Sbjct: 144 EEIEFIQGLEKSTGKKIGIYPEIKAPWFHHQNGKDIAKATLEVLKKYGYTKKSDMVYLQT 203
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK EL PK+GMDLKLVQLIAYNDW ET E+ +GKWV YDYDWMFK GAMK+
Sbjct: 204 FDYNELKRIKTELMPKMGMDLKLVQLIAYNDWHETEEKDKNGKWVNYDYDWMFKEGAMKE 263
Query: 121 IA 122
IA
Sbjct: 264 IA 265
>ref|ZP_00132404.2| COG0584: Glycerophosphoryl diester phosphodiesterase [Haemophilus
somnus 2336]
Length = 361
Score = 192 bits (487), Expect = 2e-48
Identities = 89/122 (72%), Positives = 102/122 (82%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
+E+EF+QGL STG+ IGIYPEIKAPW H QEGKDI+ L VLK+YGYT K+D VYLQ
Sbjct: 152 DELEFIQGLEKSTGQKIGIYPEIKAPWLHHQEGKDIALATLKVLKKYGYTQKDDLVYLQT 211
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK EL PKLGMD+KLVQL+AY+DW ET E+ A GKWV YDYDWMFKPGA++K
Sbjct: 212 FDFNELKRIKTELLPKLGMDVKLVQLVAYSDWGETQEKNAQGKWVNYDYDWMFKPGAVEK 271
Query: 121 IA 122
IA
Sbjct: 272 IA 273
>ref|ZP_00123591.1| COG0584: Glycerophosphoryl diester phosphodiesterase [Haemophilus
somnus 129PT]
Length = 361
Score = 192 bits (487), Expect = 2e-48
Identities = 89/122 (72%), Positives = 102/122 (82%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
+E+EF+QGL STG+ IGIYPEIKAPW H QEGKDI+ L VLK+YGYT K+D VYLQ
Sbjct: 152 DELEFIQGLEKSTGQKIGIYPEIKAPWLHHQEGKDIALATLKVLKKYGYTKKDDLVYLQT 211
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK EL PKLGMD+KLVQL+AY+DW ET E+ A GKWV YDYDWMFKPGA++K
Sbjct: 212 FDFNELKRIKTELLPKLGMDVKLVQLVAYSDWGETQEKNAQGKWVNYDYDWMFKPGAVEK 271
Query: 121 IA 122
IA
Sbjct: 272 IA 273
>gb|AAK03528.1| GlpQ [Pasteurella multocida subsp. multocida str. Pm70]
gi|15603309|ref|NP_246383.1| GlpQ [Pasteurella multocida
subsp. multocida str. Pm70] gi|32812312|gb|AAO73332.1|
GlpQ [Pasteurella multocida]
Length = 358
Score = 189 bits (479), Expect = 2e-47
Identities = 86/122 (70%), Positives = 100/122 (81%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
+EIEF+QGL STGK IGIYPEIKAPW H +EGKDI+++ L VLK+YGY K+ VYLQ
Sbjct: 148 DEIEFIQGLEKSTGKKIGIYPEIKAPWLHHKEGKDIAAETLKVLKKYGYDTKDARVYLQT 207
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK EL PK+GMD+KLVQL+AY DW ET E+ A GKWV YDYDWMFKPGAM +
Sbjct: 208 FDFNELKRIKTELLPKMGMDIKLVQLVAYTDWHETEEKNAQGKWVNYDYDWMFKPGAMAE 267
Query: 121 IA 122
+A
Sbjct: 268 VA 269
>gb|AAU38599.1| UgpQ protein [Mannheimia succiniciproducens MBEL55E]
gi|52426047|ref|YP_089184.1| UgpQ protein [Mannheimia
succiniciproducens MBEL55E]
Length = 368
Score = 186 bits (473), Expect = 9e-47
Identities = 85/122 (69%), Positives = 98/122 (79%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
EE+EF+QGL STGK +GIYPEIKAPW H QEGKDI+ L VL++YGYT K D VYLQ
Sbjct: 155 EELEFIQGLEKSTGKKVGIYPEIKAPWLHHQEGKDIAVATLKVLQKYGYTKKTDPVYLQT 214
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK +L PK+GMD+KLVQL+AY DW ET E+ A GKWV YDYDWMFK GAM +
Sbjct: 215 FDFNELKRIKTDLLPKMGMDVKLVQLVAYTDWHETEEKNAQGKWVNYDYDWMFKDGAMAE 274
Query: 121 IA 122
+A
Sbjct: 275 VA 276
>ref|NP_438849.1| glycerophosphoryl diester phosphodiesterase [Haemophilus influenzae
Rd KW20] gi|1573690|gb|AAC22348.1| glycerophosphoryl
diester phosphodiesterase (glpQ) [Haemophilus influenzae
Rd KW20] gi|1075334|pir||G64086 glycerophosphodiester
phosphodiesterase (EC 3.1.4.46) - Haemophilus influenzae
(strain Rd KW20) gi|1169954|sp|Q06282|GLPQ_HAEIN
Glycerophosphoryl diester phosphodiesterase precursor
(Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(Immunoglobulin D-binding protein) (IgD-binding protein)
Length = 364
Score = 184 bits (466), Expect = 6e-46
Identities = 84/121 (69%), Positives = 98/121 (80%)
Query: 1 EEIEFVQGLNHSTGKNIGIYPEIKAPWFHKQEGKDISSKVLAVLKQYGYTGKNDNVYLQC 60
+EIEF+QGL STGK +GIYPEIKAPWFH Q GKDI+++ L VLK+YGY K D VYLQ
Sbjct: 154 DEIEFIQGLEKSTGKKVGIYPEIKAPWFHHQNGKDIATETLKVLKKYGYDKKTDMVYLQT 213
Query: 61 FDANELKRIKNELEPKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMKK 120
FD NELKRIK EL P++GMDLKLVQLIAY DW+ET E+ G WV Y+YDWMFKPGAM +
Sbjct: 214 FDFNELKRIKTELLPQMGMDLKLVQLIAYTDWKETQEKDPKGYWVNYNYDWMFKPGAMAE 273
Query: 121 I 121
+
Sbjct: 274 V 274
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,531,552
Number of Sequences: 2540612
Number of extensions: 8941731
Number of successful extensions: 15486
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 15372
Number of HSP's gapped (non-prelim): 114
length of query: 122
length of database: 863,360,394
effective HSP length: 98
effective length of query: 24
effective length of database: 614,380,418
effective search space: 14745130032
effective search space used: 14745130032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0082b.1