BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0081b.6
         (1129 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC01821.1| transcriptional regulatory-like protein [Arabido...  1195  0.0
ref|NP_186781.3| paired amphipathic helix repeat-containing prot...  1164  0.0
gb|AAF03494.1| unknown protein [Arabidopsis thaliana]                1132  0.0
ref|NP_908404.1| putative co-repressor protein [Oryza sativa (ja...  1007  0.0
pir||T00649 hypothetical protein F3I6.12 - Arabidopsis thaliana ...   915  0.0
ref|NP_173829.2| paired amphipathic helix repeat-containing prot...   915  0.0
ref|NP_177163.2| paired amphipathic helix repeat-containing prot...   890  0.0
pir||C96723 hypothetical protein F20P5.21 [imported] - Arabidops...   881  0.0
ref|XP_549869.1| transcriptional co-repressor -like [Oryza sativ...   838  0.0
dbj|BAC43533.1| putative transcriptional regulatory protein [Ara...   671  0.0
ref|XP_493857.1| Similar to Arabidopsis chromosome I BAC genomic...   642  0.0
ref|NP_176197.2| paired amphipathic helix repeat-containing prot...   500  e-140
gb|AAD39330.1| Hypothetical protein [Arabidopsis thaliana] gi|25...   437  e-120
ref|NP_172515.1| paired amphipathic helix repeat-containing prot...   414  e-113
gb|AAD39565.1| T10O24.5 [Arabidopsis thaliana] gi|25402600|pir||...   403  e-110
ref|XP_510682.1| PREDICTED: similar to transcriptional co-repres...   278  6e-73
ref|NP_056292.1| transcriptional co-repressor Sin3A [Homo sapien...   278  1e-72
gb|AAP97288.1| MSIN3A [Homo sapiens]                                  278  1e-72
dbj|BAB55197.1| unnamed protein product [Homo sapiens]                278  1e-72
dbj|BAC04801.1| unnamed protein product [Homo sapiens]                276  3e-72

>emb|CAC01821.1| transcriptional regulatory-like protein [Arabidopsis thaliana]
            gi|15242192|ref|NP_197006.1| paired amphipathic helix
            repeat-containing protein [Arabidopsis thaliana]
            gi|11358896|pir||T51447 transcription regulator-like
            protein - Arabidopsis thaliana
          Length = 1377

 Score = 1195 bits (3092), Expect = 0.0
 Identities = 660/1218 (54%), Positives = 835/1218 (68%), Gaps = 141/1218 (11%)

Query: 1    MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
            MKR RDDIY A+ SQFKRP  SSRG+SY QS + GGG  G G         +QKLTT+DA
Sbjct: 1    MKRIRDDIY-ATGSQFKRPLGSSRGESYEQSPITGGGSIGEGG------INTQKLTTDDA 53

Query: 61   LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
            L+YLK+VK+MFQDQR+KYD+FLEVMKDFKAQ+TDT+GVI+RVKELFKGHN+LIFGFNTFL
Sbjct: 54   LTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFL 113

Query: 121  PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
            PKG+EITLD+ EAP+KKTVEFEEAISFVNKIK RFQ +E VYKSFL+ILNMYRK++KDI 
Sbjct: 114  PKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDIT 173

Query: 181  EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQ 240
            EVY+EV+TLF+DH DLLEEFTRFLPD S AP T+ A   R+  QR+++R S  P++R+M 
Sbjct: 174  EVYNEVSTLFEDHSDLLEEFTRFLPD-SLAPHTE-AQLLRSQAQRYDDRGSGPPLVRRMF 231

Query: 241  VDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRK------RDRRIRDQDERD 294
            ++K R RR+R  +   DRD SV+  +++DDK+M+ +H++QRK      R+RR RD ++ +
Sbjct: 232  MEKDR-RRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDNRERRSRDLEDGE 290

Query: 295  PDLDNSRDLTSQRFRDKKKTVKKAEG------------------MYGEAFSFCEKVKEKL 336
             + DN      Q F +K+K+ ++ EG                  MY +AF FCEKVKE+L
Sbjct: 291  AEQDN-----LQHFSEKRKSSRRMEGFEAYSGPASHSEKNNLKSMYNQAFLFCEKVKERL 345

Query: 337  SSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGF--L 394
             S DDYQ FLKCLN+F+NGII++ DLQNLV+D+LGK  DLMDEF  F ERCE+I+GF  L
Sbjct: 346  CSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESIDGFQHL 405

Query: 395  AGVMSK----------------------------------KSLSTDAHLSRSSKLEDKDK 420
            AGVMSK                                  +SL ++ +LSRS K E+KD+
Sbjct: 406  AGVMSKSRQQSPSFLSMSILFSFFSYVIGIEITLPGTLAAESLGSEENLSRSVKGEEKDR 465

Query: 421  DQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQ 480
            + KR+++ AKEK+R K+KYMGKSIQELDLSDC+RCTPSYRLLP DYPIP+   R + GA 
Sbjct: 466  EHKRDVEAAKEKERSKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAA 525

Query: 481  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNN 540
            VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELD+LLESV SA+K AEEL N 
Sbjct: 526  VLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEELLNI 585

Query: 541  INENKISVEALSRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQ 600
            I + KIS E   RIEDHFT LNLRCIERLYGDHGLDV D++RKNP  ALPVILTRLKQKQ
Sbjct: 586  IIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQ 645

Query: 601  EEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKE 660
            +EW +CR  FN VWA++YAKNHYKSLDHRSFYFKQQDSKNLS K+LV+E+K++KEK QKE
Sbjct: 646  DEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKEKSQKE 705

Query: 661  DHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTF 720
            D ++ SI+A  RQP+IPHLE++Y D  IHEDL+KLVQ+SCEE+ S+KE   K+++LW+ F
Sbjct: 706  DDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLKLWANF 765

Query: 721  LEPMLGVTSQSHGTERVEDRKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVD 780
            LE ML V  ++ G++ VED       R F +    G+ +   D+IS  SR  K   N   
Sbjct: 766  LELMLDVAPRAKGSDSVEDVVETQHQRAFTS----GEANESSDAISLVSRQLKFATN--- 818

Query: 781  GRVTEVKNIHRTSVAANDKENGSV----GGELVCRDDQLMDKGLKKVECSDKAGFSKQFA 836
                   ++H +S  +   E G +     G+   +D  L +K +    C++K    ++  
Sbjct: 819  ------GDVHASSGVSKHGETGLLNRDSSGKENLKDGDLANKDV--ATCAEKPQKDQEIG 870

Query: 837  S---------DEQGVKNNPSIAIRGENSLNRTNLDVSPGCVSAPSRPTDADDSVAKSQTV 887
            +         DE+   ++ S     EN+  +     S G     S+P++A D V   Q  
Sbjct: 871  NGAAKRSGDVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAIDKVDSIQH- 929

Query: 888  NLPLVEGGDIAAPVPVANGVLVENSKVKS-HEESSGPCKVEKEEGELSPNGDSEEDFVAY 946
                 +G DI   + + NG+  + SK  S ++ES GP K+EKEEGELSP GDSE++FV Y
Sbjct: 930  ----TQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSEDNFVVY 985

Query: 947  RDSNAQSMAKSKHNIERRKYESRDREEECGPETGGDNDADADDEDSENVSEAGEDVSGSE 1006
             D   ++ AK++H++E                  G+ND DADDED ++ SEAGED SG+E
Sbjct: 986  EDRELKATAKTEHSVEAE----------------GENDEDADDEDGDDASEAGEDASGTE 1029

Query: 1007 SAGDECFQEDH-EEDDIEHDDVDGKAESEGEAEGMCDAQGGGDSSSLPLSERFLSSVKPL 1065
            S GDEC Q+D+  E++ EHD++DGKAESEGEAEGM ++    D    P SER L SVKPL
Sbjct: 1030 SIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM-ESHLIEDKGLFPSSERVLLSVKPL 1088

Query: 1066 TKHVSAVSFAEE-MKDSRVFYGNDDFYALFRLHQ------------ILYERILSAKINSM 1112
            +KH++A +  +E  KDSRVFYGNDDFY LFRLH+            ILYERILSAK    
Sbjct: 1089 SKHIAAAALVDEKKKDSRVFYGNDDFYVLFRLHRVSAIDSYDLLSHILYERILSAKTYCS 1148

Query: 1113 SAEMKWK-AKDASSPDPY 1129
             +EMK +  KD  SPDPY
Sbjct: 1149 GSEMKLRNTKDTCSPDPY 1166


>ref|NP_186781.3| paired amphipathic helix repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1378

 Score = 1164 bits (3012), Expect = 0.0
 Identities = 661/1183 (55%), Positives = 814/1183 (67%), Gaps = 85/1183 (7%)

Query: 1    MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
            MKR RDD+Y AS SQF+RP  SSRG   GQS V G G       GG     SQKLTTNDA
Sbjct: 1    MKRIRDDVY-ASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRV-SQKLTTNDA 58

Query: 61   LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
            LSYL++VK+MFQDQREKYD FLEVMKDFKAQRTDT GVIARVKELFKGHN+LI+GFNTFL
Sbjct: 59   LSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFL 118

Query: 121  PKGYEITL-DEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDI 179
            PKGYEITL +ED+A  KKTVEFE+AI+FVNKIK RF+ DEHVYKSFL+ILNMYRKE+K+I
Sbjct: 119  PKGYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEI 178

Query: 180  GEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQM 239
             EVY+EV+ LF+ H DLLE+FTRFLP  ++ PS   A   R+  Q++++R S  P++ QM
Sbjct: 179  KEVYNEVSILFQGHLDLLEQFTRFLP--ASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQM 236

Query: 240  QVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKR------DRRIRDQDER 293
            QV+K+R RR+R  +     D SVE  +++DDKTM+ + +EQRKR       RR RD D+R
Sbjct: 237  QVEKER-RRERAVA--LRGDYSVERYDLNDDKTMVKIQREQRKRLDKENRARRGRDLDDR 293

Query: 294  DPDLDNSRDLTSQRFRDKKKTVKKAE------------------------GMYGEAFSFC 329
            +   DN        F +K+K+ ++AE                        GMY +AF FC
Sbjct: 294  EAGQDNLH-----HFPEKRKSSRRAEALEAYSGSASHSEKDNLKNVYFVLGMYKQAFVFC 348

Query: 330  EKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCEN 389
            EKVK++L S DDYQTFLKCLNIF+NGII++ DLQNLV+DLLGK  DLMDEF  F ERCE+
Sbjct: 349  EKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCES 408

Query: 390  I-EGF--LAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQE 446
            I +GF  LAGVMSKK  S++  LSR  K+E+K+ + K E++  KE ++ K++YMGKSIQE
Sbjct: 409  ITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKSIQE 468

Query: 447  LDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQY 506
            LDLSDC+ CTPSYRLLP+DYPIP ASQRSELGA+VLNDHWVSVTSGSEDYSFKHMR+NQY
Sbjct: 469  LDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQY 528

Query: 507  EESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCI 566
            EESLFRCEDDRFELD+LLESVSSA++ AE L N I E KIS     RIEDHFT LNLRCI
Sbjct: 529  EESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCI 588

Query: 567  ERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSL 626
            ERLYGDHGLDVIDIL KNP  ALPVILTRLKQKQ EW +CR DF+KVWA +YAKNHYKSL
Sbjct: 589  ERLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSL 648

Query: 627  DHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDG 686
            DHRSFYFKQQDSKNLS KSL+AEIKE+KEK Q +D ++ SI+A  RQP+ P+LE+EY + 
Sbjct: 649  DHRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNR 708

Query: 687  GIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVED------- 739
             IHED++K+VQ+SCEE+ S+KE L+K++RLW  FLE +LGV  ++ GT+ VED       
Sbjct: 709  AIHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKT 768

Query: 740  RKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDK 799
                HS+     + V   G   R +          D+N   G  T    I   +  +  K
Sbjct: 769  LDVNHSTSPNGEAAVSSGGDTARLASRKLKSAANGDENSSSG--TFKHGIGLLNKDSTGK 826

Query: 800  ENGSVGGELVCRDDQLMD--KGLKKVECSDKA--GFSKQFASD--EQGVKNNPSIAIRGE 853
            EN     E+  RD       K  K+ E  ++A   F K    D  E+   ++ SI    E
Sbjct: 827  EN-LEDVEIANRDGVACSAVKPQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGAE 885

Query: 854  NSLNRTNLDVSPGCVSAPSRP----TDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLV 909
            N+      +V PG     ++P    TD    V   +TV+    +GGD+   + +ANG+  
Sbjct: 886  NNHCVVGKEVLPGAHEIQAKPSDTLTDIHHDVDSIETVH--STQGGDVGNSIVLANGLRS 943

Query: 910  ENSK-VKSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYES 968
            ++SK  ++ ++  GP + EKEEGELSPNGD E++F  Y+D   +S +K ++        S
Sbjct: 944  DSSKGTRNSDDPEGPSRNEKEEGELSPNGDFEDNFGVYKDHGVKSTSKPEN--------S 995

Query: 969  RDREEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQ-EDHEEDDIEHDDV 1027
             + E E   E   +N+ DADD DSEN SEA    SG+ES GD C Q ED EE++ EHD++
Sbjct: 996  AEAEVEADAEV--ENEDDADDVDSENASEA----SGTESGGDVCSQDEDREEENGEHDEI 1049

Query: 1028 DGKAESEGEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGN 1087
            DGKAESEGEAEGM      G+S  LP SER L SV+PL+KHV+AV   E  KD +VFYGN
Sbjct: 1050 DGKAESEGEAEGMDPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGN 1109

Query: 1088 DDFYALFRLHQILYERILSAKINSMSAEMKWK-AKDASSPDPY 1129
            DDFY LFRLHQILYERIL AK N    E+K K  KD ++ DPY
Sbjct: 1110 DDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDTNAGDPY 1152


>gb|AAF03494.1| unknown protein [Arabidopsis thaliana]
          Length = 1324

 Score = 1132 bits (2929), Expect = 0.0
 Identities = 643/1167 (55%), Positives = 784/1167 (67%), Gaps = 114/1167 (9%)

Query: 1    MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
            MKR RDD+Y AS SQF+RP  SSRG   GQS V G G       GG     SQKLTTNDA
Sbjct: 1    MKRIRDDVY-ASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRV-SQKLTTNDA 58

Query: 61   LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
            LSYL++VK+MFQDQREKYD FLEVMKDFKAQRTDT GVIARVKELFKGHN+LI+GFNTFL
Sbjct: 59   LSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFL 118

Query: 121  PKGYEITL-DEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDI 179
            PKGYEITL +ED+A  KKTVEFE+AI+FVNKIK RF+ DEHVYKSFL+ILNMYRKE+K+I
Sbjct: 119  PKGYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEI 178

Query: 180  GEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQM 239
             EVY+EV+ LF+ H DLLE+FTRFLP  ++ PS   A   R+  Q++++R S  P++ QM
Sbjct: 179  KEVYNEVSILFQGHLDLLEQFTRFLP--ASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQM 236

Query: 240  QVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKR------DRRIRDQDER 293
            QV+K+R RR+R  +     D SVE  +++DDKTM+ + +EQRKR       RR RD D+R
Sbjct: 237  QVEKER-RRERAVA--LRGDYSVERYDLNDDKTMVKIQREQRKRLDKENRARRGRDLDDR 293

Query: 294  DPDLDNSRDLTSQRFRDKKKTVKKAEG------------------MYGEAFSFCEKVKEK 335
            +   DN        F +K+K+ ++AE                   MY +AF FCEKVK++
Sbjct: 294  EAGQDNLH-----HFPEKRKSSRRAEALEAYSGSASHSEKDNLKSMYKQAFVFCEKVKDR 348

Query: 336  LSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGF-- 393
            L S DDYQTFLKCLNIF+NGII++ DLQNLV+DLLGK  DLMDEF  F ERCE+I G   
Sbjct: 349  LCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCESITGTEI 408

Query: 394  -----LAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELD 448
                 LAGVMSKK  S++  LSR  K+E+K+ + K E++  KE ++ K++YMGKSIQELD
Sbjct: 409  HGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKSIQELD 468

Query: 449  LSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEE 508
            LSDC+ CTPSYRLLP+DYPIP ASQRSELGA+VLNDHWVSVTSGSEDYSFKHMR+NQYEE
Sbjct: 469  LSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEE 528

Query: 509  SLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIER 568
            SLFRCEDDRFELD+LLESVSSA++ AE L N I E KIS     RIEDHFT LNLRCIER
Sbjct: 529  SLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIER 588

Query: 569  LYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDH 628
            LYGDHGLDVIDIL KNP  ALPVILTRLKQKQ EW +CR DF+KVWA +YAKNHYKSLDH
Sbjct: 589  LYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDH 648

Query: 629  RSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGI 688
            RSFYFKQQDSKNLS KSL+AEIKE+KEK Q +D ++ SI+A  RQP+ P+LE+EY +  I
Sbjct: 649  RSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAI 708

Query: 689  HEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVEDRKAGHSSRN 748
            HED++K+VQ+SCEE+ S+KE L+K++RLW  FLE +LGV  ++ GT+ VED      + +
Sbjct: 709  HEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLD 768

Query: 749  FAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGSVG--- 805
                               +S  P  +     G  T      +   AAN  EN S G   
Sbjct: 769  V-----------------NHSTSPNGEAAVSSGGDTARLASRKLKSAANGDENSSSGTFK 811

Query: 806  -GELVCRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKNNPSIAIRGENSLNRTNLDVS 864
             G  +   D    + L+ VE +++ G +      ++  +        G  +  R    + 
Sbjct: 812  HGIGLLNKDSTGKENLEDVEIANRDGVACSAVKPQKEQET-------GNEAEKRFGKPI- 863

Query: 865  PGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENSKVKSHEESSGPC 924
                     P D  +  A S            I+ P    N     N  V   E   GP 
Sbjct: 864  ---------PMDISERAAIS-----------SISIPSGAEN-----NHCVVGKEVLPGPS 898

Query: 925  KVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPETGGDND 984
            + EKEEGELSPNGD E++F  Y+D   +S +K ++        S + E E   E   +N+
Sbjct: 899  RNEKEEGELSPNGDFEDNFGVYKDHGVKSTSKPEN--------SAEAEVEADAEV--ENE 948

Query: 985  ADADDEDSENVSEAGEDVSGSESAGDECFQ-EDHEEDDIEHDDVDGKAESEGEAEGMCDA 1043
             DADD DSEN SEA    SG+ES GD C Q ED EE++ EHD++DGKAESEGEAEGM   
Sbjct: 949  DDADDVDSENASEA----SGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGMDPH 1004

Query: 1044 QGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYER 1103
               G+S  LP SER L SV+PL+KHV+AV   E  KD +VFYGNDDFY LFRLHQILYER
Sbjct: 1005 LLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYER 1064

Query: 1104 ILSAKINSMSAEMKWK-AKDASSPDPY 1129
            IL AK N    E+K K  KD ++ DPY
Sbjct: 1065 ILYAKRNCSGGELKSKNLKDTNAGDPY 1091


>ref|NP_908404.1| putative co-repressor protein [Oryza sativa (japonica
            cultivar-group)]
          Length = 1589

 Score = 1007 bits (2603), Expect = 0.0
 Identities = 591/1207 (48%), Positives = 753/1207 (61%), Gaps = 137/1207 (11%)

Query: 11   ASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDALSYLKQVKDM 70
            AS  Q +R     +  +   +Q P GG           AT  QKLTTNDAL YLK VKD 
Sbjct: 208  ASGGQIRRRSPPPQAAAAPPAQPPAGG-----------ATAGQKLTTNDALVYLKAVKDK 256

Query: 71   FQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFLPKGYEITLDE 130
            FQD+REKY+ FLEVM+DFK++R DT GVI RVK LF G+  LI GFNTFLPKGY I L E
Sbjct: 257  FQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNGYPELILGFNTFLPKGYAIKLQE 316

Query: 131  DEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLF 190
            +    KK V+F EAI+FVNKIK RFQ DEHVYK+FLDILNMYRK++K I +VY EVA LF
Sbjct: 317  E----KKPVDFVEAINFVNKIKNRFQHDEHVYKAFLDILNMYRKDNKSIQDVYHEVAVLF 372

Query: 191  KDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQVDKQRYRRDR 250
             DH+DLLEEF  FLPDTS  P    AP  R  ++R +  + + P  R  + DK       
Sbjct: 373  ADHKDLLEEFQHFLPDTSVPPQAV-AP-SRPGIRRDDRTSLVPPASRNEKRDKAH----- 425

Query: 251  LPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKRDRRIRDQDERDPDLDNSRDL------- 303
             P  DR+   SV+ P++D      ++ + +R +DR   D+ ++D +LD S+DL       
Sbjct: 426  -PHADRE---SVDRPDLD------HVIQRRRPKDRHDYDRGDKDGELD-SKDLDIGLKRK 474

Query: 304  ---------------------------TSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKL 336
                                        S    D K  +K    +Y + F FCEKVKEKL
Sbjct: 475  PFPRKMEDPTSADAHHGGPLENHGILGASASLYDNKDALKS---VYTQEFHFCEKVKEKL 531

Query: 337  SSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAG 396
               D YQ FLKCL+I++  II +++L+NLV D+L +H DLMD F +FLE CENI+GFLAG
Sbjct: 532  EH-DAYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHCENIDGFLAG 590

Query: 397  VMSKKS-----LSTDAHLSRSSKLEDKD---KDQKREMDGAKEKDRYKE----------- 437
            V SKKS        +    R  K E++    K  ++E D  ++   YKE           
Sbjct: 591  VFSKKSHVNTNYINEGQTGRIVKTEERKEGGKGTEKEPDRIEKVPAYKEAPSQKPVFSSK 650

Query: 438  -KYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDY 496
             KY+ K + ELDLS+C+RCTPSYRLLP  YP+P A  ++ELGA VLNDHWVSVTSGSEDY
Sbjct: 651  EKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKTELGASVLNDHWVSVTSGSEDY 710

Query: 497  SFKHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEALSRIED 556
            SFKHMRKNQYEESLFRCEDDRFELD+LLESV++A+KR EEL   + +N +  ++  RI++
Sbjct: 711  SFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSLKPDSPIRIDE 770

Query: 557  HFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAE 616
            H T LNLRCIERLYGDHGLDV+D+LRKN + ALPVILTRLKQKQEEW+RCRSDFNKVWAE
Sbjct: 771  HLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAE 830

Query: 617  IYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLI 676
            IYAKN++KSLDHRSFYFKQQD+KNLSTKSL+ EIKEI EK +KED ++ +IAA NR+P++
Sbjct: 831  IYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIV 890

Query: 677  PHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTER 736
            P++ F+Y D  IHED+YK+++YSC EV SS + L+K++R+W+TFLEP+LGV  ++HG E 
Sbjct: 891  PNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAED 950

Query: 737  VEDRKAGHSSRNFAASNVG-------GDGSPH-RDSISTNSRLPKSDKNEVDGRVTEVKN 788
             +  K    +     + VG       G  + H  D      + P S    V+G  T+ +N
Sbjct: 951  ADAVKPKSRTTKSGLATVGEINTTAAGAVAKHGHDENIPQEQTPSSLARMVNGVATDTQN 1010

Query: 789  ----IHRTSVAANDKENGSVGGELVCRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKN 844
                + RT+  A +  N +V G +     Q    G  ++        S Q    E+  +N
Sbjct: 1011 GFHDVDRTARRAEEPSNTAVNGRV-----QGASPGTNEI-----PAVSTQNMPTERSAEN 1060

Query: 845  NPSIAIRGENSLNRTNLDVSPGCVSAPSRPTDADDSVAKSQTVN--LPLVEGGDIAAPVP 902
             P +A   ++   + NL+ + G V+A       +D+ A+++  N  LP VEGG+      
Sbjct: 1061 IP-VARTEQHGNAKANLEPTSG-VNASRSSHAGNDTAAEARAGNETLPSVEGGETGRSGS 1118

Query: 903  VAN-GVLVENSKVKSHEESS---GPCKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKS 957
              N G   E +K +   E+S      KVE+EEGELSPNGD EED F  + D     ++K+
Sbjct: 1119 TLNGGGASEGNKGRLFNEASASHNTPKVEREEGELSPNGDFEEDNFAPFEDGAVDGVSKA 1178

Query: 958  KHNIERRKYESRDREEECG-PETGGDNDADADD----------EDSENVSEAGEDVSGSE 1006
            K     R ++ R  E +    E  G+NDADADD          EDSEN SE GED SGSE
Sbjct: 1179 KEGSTSRPFQGRSGEAQPSCAEAAGENDADADDEGEESAQRSTEDSENASEGGEDASGSE 1238

Query: 1007 SA-GDECFQEDH--EEDDIEHDDVDGKAESEGEAEGMCDAQGGGDSSSLPLSERFLSSVK 1063
            S  G+EC +EDH  EE+D++HDD D KAESEGEAEG  +        SLPLSERFL SVK
Sbjct: 1239 SGDGEECSREDHDEEEEDMDHDDQDAKAESEGEAEGTTETHDVEGGISLPLSERFLHSVK 1298

Query: 1064 PLTKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWK-AKD 1122
            PL KHV       + K SR+FYGND FY LFRLHQILYER+LSAK NS SAE KW+ +KD
Sbjct: 1299 PLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRTSKD 1358

Query: 1123 ASSPDPY 1129
             + PD Y
Sbjct: 1359 TNPPDLY 1365


>pir||T00649 hypothetical protein F3I6.12 - Arabidopsis thaliana
            gi|2829870|gb|AAC00578.1| Hypothetical protein
            [Arabidopsis thaliana]
          Length = 1263

 Score =  915 bits (2366), Expect = 0.0
 Identities = 551/1140 (48%), Positives = 727/1140 (63%), Gaps = 96/1140 (8%)

Query: 45   GGGEATTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKE 104
            GGG A   QKLTTNDAL+YLK VKD FQDQR KYD FLEVMK+FK+QR DTAGVI RVKE
Sbjct: 3    GGGSA---QKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKE 59

Query: 105  LFKGHNHLIFGFNTFLPKGYEITL--DEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVY 162
            LFKGH  LI GFNTFLPKG+EITL  ++ + P KK VEFEEAISFVNKIK RFQ D+ VY
Sbjct: 60   LFKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVY 119

Query: 163  KSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAA---PSTQHAPFG 219
            KSFLDILNMYR++ K I EVY EVA LF+DH DLL EFT FLPDTSA    PS + +   
Sbjct: 120  KSFLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASIPSVKTSVRE 179

Query: 220  RNSLQRFNERNSMTPM------MRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTM 273
            R       +   +TP          +  D++R  +     H R  +   EH +  D +  
Sbjct: 180  RGVSLADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHRDARDFEP- 238

Query: 274  INLHKEQ---RKRDRRIRDQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCE 330
             +  KEQ   +K+   IR  D  +  + N   L+           K A   Y +  +  +
Sbjct: 239  -HSKKEQFLNKKQKLHIRGDDPAE--ISNQSKLSGAVPSSSTYDEKGAMKSYSQDLAIVD 295

Query: 331  KVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCEN- 389
            +VKEKL++S+ YQ FL+CLN+F+  II + +LQ+LV +L+G + DLMD F +FL +CE  
Sbjct: 296  RVKEKLNASE-YQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKN 354

Query: 390  ------------IEGFLAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKE 437
                         EG L+G+++KKSL ++    + S   D+D++ KR+ DG +++D  KE
Sbjct: 355  EKRQICNLLNLLAEGLLSGILTKKSLWSEGKYPQPSLDNDRDQEHKRD-DGLRDRDHEKE 413

Query: 438  KY--------MGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSV 489
            +           K I ELDLS+C++CTPSYRLLP +YPI  ASQ++E+G  VLNDHWVSV
Sbjct: 414  RLEKAAANLKWAKPISELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSV 473

Query: 490  TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVE 549
            TSGSEDYSF HMRKNQYEESLF+CEDDRFELD+LLESV+S +K  EEL   IN N++   
Sbjct: 474  TSGSEDYSFSHMRKNQYEESLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTN 533

Query: 550  ALSRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSD 609
            +  R+EDH T LNLRCIERLYGDHGLDV+D+L+KN + ALPVILTRLKQKQEEW RCRSD
Sbjct: 534  SPIRVEDHLTALNLRCIERLYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSD 593

Query: 610  FNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAA 669
            F+KVWAEIYAKN+YKSLDHRSFYFKQQDSK LS K+L+AEIKEI EK ++ED  + + AA
Sbjct: 594  FDKVWAEIYAKNYYKSLDHRSFYFKQQDSKKLSMKALLAEIKEITEK-KREDDSLLAFAA 652

Query: 670  ENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTS 729
             NR  + P LEF+Y D  +HEDLY+L++YSC E+ S+ E L+K+M++W+TF+E + GV S
Sbjct: 653  GNRLSISPDLEFDYPDHDLHEDLYQLIKYSCAEMCST-EQLDKVMKIWTTFVEQIFGVPS 711

Query: 730  QSHGTERVED--RKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVK 787
            +  G E  ED  +    + ++ ++S    +GSPH  +   +SR  KS +     +  E  
Sbjct: 712  RPQGAEDQEDVVKSMNQNVKSGSSSAGESEGSPHNYASVADSRRSKSSR-----KANEHS 766

Query: 788  NIHRTSVAANDKENGSVG--GELVCRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKNN 845
             + +TS   N + +G+ G   + +C   Q  +K LK V  SD+   SKQ  S E+    +
Sbjct: 767  QLGQTS---NSERDGAAGRTSDALCETAQ-HEKMLKNVVTSDEKPESKQAVSIERA---H 819

Query: 846  PSIAIRGENSLNRTN-----LDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAP 900
             S A+  +  L+++N     + ++  C +     T   +   K    N P +E G+    
Sbjct: 820  DSTALAVDGLLDQSNGGSSIVHMTGHCNNNLKPVTCGTELELKMNDGNGPKLEVGNKKL- 878

Query: 901  VPVANGVLVENSKVKSHEESSGPCKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKSKH 959
              + NG+ VE   + S +E +G  KVE+EEGELSPNGD EED F  Y  ++ ++ +K+  
Sbjct: 879  --LTNGIAVE---ITSDQEMAGTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 933

Query: 960  NIERRKYESRDRE-EECGPETGGDNDADADD------EDSENVSEAGEDVSGSESAGDEC 1012
            +        R RE E    ET  +NDA+ D+      EDS N  E G DVSG+ES G E 
Sbjct: 934  STGNNISGDRSREGEPSCLETRAENDAEGDENAARSSEDSRNEYENG-DVSGTESGGGE- 991

Query: 1013 FQEDHEEDDIEHDDVDGKAESEGEAEGMCDAQGGGDS-SSLPLSERFLSSVKPLTKHV-S 1070
                  EDD+++++   K ESEGEAE M DA    ++ S+LP+S RFL  VKPL K+V S
Sbjct: 992  ----DPEDDLDNNN---KGESEGEAECMADAHDAEENGSALPVSARFLLHVKPLVKYVPS 1044

Query: 1071 AVSF----AEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSP 1126
            A++      + +K+S+VFYGND FY LFRLH+ILYERILSAK+NS S E KW+  +  +P
Sbjct: 1045 AIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRTSNTKNP 1104


>ref|NP_173829.2| paired amphipathic helix repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1353

 Score =  915 bits (2364), Expect = 0.0
 Identities = 549/1131 (48%), Positives = 724/1131 (63%), Gaps = 87/1131 (7%)

Query: 45   GGGEATTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKE 104
            GGG A   QKLTTNDAL+YLK VKD FQDQR KYD FLEVMK+FK+QR DTAGVI RVKE
Sbjct: 26   GGGSA---QKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKE 82

Query: 105  LFKGHNHLIFGFNTFLPKGYEITL--DEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVY 162
            LFKGH  LI GFNTFLPKG+EITL  ++ + P KK VEFEEAISFVNKIK RFQ D+ VY
Sbjct: 83   LFKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVY 142

Query: 163  KSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAA---PSTQHAPFG 219
            KSFLDILNMYR++ K I EVY EVA LF+DH DLL EFT FLPDTSA    PS + +   
Sbjct: 143  KSFLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASIPSVKTSVRE 202

Query: 220  RNSLQRFNERNSMTPM------MRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTM 273
            R       +   +TP          +  D++R  +     H R  +   EH +  D +  
Sbjct: 203  RGVSLADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHRDARDFEP- 261

Query: 274  INLHKEQ---RKRDRRIRDQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCE 330
             +  KEQ   +K+   IR  D  +  + N   L+           K A   Y +  +  +
Sbjct: 262  -HSKKEQFLNKKQKLHIRGDDPAE--ISNQSKLSGAVPSSSTYDEKGAMKSYSQDLAIVD 318

Query: 331  KVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENI 390
            +VKEKL++S+ YQ FL+CLN+F+  II + +LQ+LV +L+G + DLMD F +FL +CE  
Sbjct: 319  RVKEKLNASE-YQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKN 377

Query: 391  EGFLAGVMSKKS----LSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKY------- 439
            EG L+G+++K      L  +    + S   D+D++ KR+ DG +++D  KE+        
Sbjct: 378  EGLLSGILTKSKSTYLLQGEGKYPQPSLDNDRDQEHKRD-DGLRDRDHEKERLEKAAANL 436

Query: 440  -MGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSF 498
               K I ELDLS+C++CTPSYRLLP +YPI  ASQ++E+G  VLNDHWVSVTSGSEDYSF
Sbjct: 437  KWAKPISELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSF 496

Query: 499  KHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHF 558
             HMRKNQYEESLF+CEDDRFELD+LLESV+S +K  EEL   IN N++   +  R+EDH 
Sbjct: 497  SHMRKNQYEESLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHL 556

Query: 559  TVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIY 618
            T LNLRCIERLYGDHGLDV+D+L+KN + ALPVILTRLKQKQEEW RCRSDF+KVWAEIY
Sbjct: 557  TALNLRCIERLYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIY 616

Query: 619  AKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPH 678
            AKN+YKSLDHRSFYFKQQDSK LS K+L+AEIKEI EK ++ED  + + AA NR  + P 
Sbjct: 617  AKNYYKSLDHRSFYFKQQDSKKLSMKALLAEIKEITEK-KREDDSLLAFAAGNRLSISPD 675

Query: 679  LEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVE 738
            LEF+Y D  +HEDLY+L++YSC E+ S+ E L+K+M++W+TF+E + GV S+  G E  E
Sbjct: 676  LEFDYPDHDLHEDLYQLIKYSCAEMCST-EQLDKVMKIWTTFVEQIFGVPSRPQGAEDQE 734

Query: 739  D--RKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAA 796
            D  +    + ++ ++S    +GSPH  +   +SR  KS +     +  E   + +TS   
Sbjct: 735  DVVKSMNQNVKSGSSSAGESEGSPHNYASVADSRRSKSSR-----KANEHSQLGQTS--- 786

Query: 797  NDKENGSVG--GELVCRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKNNPSIAIRGEN 854
            N + +G+ G   + +C   Q  +K LK V  SD+   SKQ  S E+    + S A+  + 
Sbjct: 787  NSERDGAAGRTSDALCETAQ-HEKMLKNVVTSDEKPESKQAVSIERA---HDSTALAVDG 842

Query: 855  SLNRTN-----LDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLV 909
             L+++N     + ++  C +     T   +   K    N P +E G+      + NG+ V
Sbjct: 843  LLDQSNGGSSIVHMTGHCNNNLKPVTCGTELELKMNDGNGPKLEVGNKKL---LTNGIAV 899

Query: 910  ENSKVKSHEESSGPCKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKSKHNIERRKYES 968
            E   + S +E +G  KVE+EEGELSPNGD EED F  Y  ++ ++ +K+  +        
Sbjct: 900  E---ITSDQEMAGTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKANDSTGNNISGD 956

Query: 969  RDRE-EECGPETGGDNDADADD------EDSENVSEAGEDVSGSESAGDECFQEDHEEDD 1021
            R RE E    ET  +NDA+ D+      EDS N  E G DVSG+ES G E       EDD
Sbjct: 957  RSREGEPSCLETRAENDAEGDENAARSSEDSRNEYENG-DVSGTESGGGE-----DPEDD 1010

Query: 1022 IEHDDVDGKAESEGEAEGMCDAQGGGDS-SSLPLSERFLSSVKPLTKHV-SAVSF----A 1075
            +++++   K ESEGEAE M DA    ++ S+LP+S RFL  VKPL K+V SA++      
Sbjct: 1011 LDNNN---KGESEGEAECMADAHDAEENGSALPVSARFLLHVKPLVKYVPSAIALHDKDK 1067

Query: 1076 EEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSP 1126
            + +K+S+VFYGND FY LFRLH+ILYERILSAK+NS S E KW+  +  +P
Sbjct: 1068 DSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRTSNTKNP 1118


>ref|NP_177163.2| paired amphipathic helix repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1362

 Score =  890 bits (2299), Expect = 0.0
 Identities = 541/1172 (46%), Positives = 717/1172 (61%), Gaps = 154/1172 (13%)

Query: 50   TTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGH 109
            +++QKLTTNDAL+YLK VKD FQD+R+KYD FLEVMKDFKAQR DT GVI RVKELFKG+
Sbjct: 5    SSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFKGN 64

Query: 110  NHLIFGFNTFLPKGYEITL-DEDEAPA--KKTVEFEEAISFVNKIKKRFQSDEHVYKSFL 166
              LI GFNTFLPKG+EITL  ED+ PA  KK VEFEEAISFVNKIK RFQ D+ VYKSFL
Sbjct: 65   RELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKSFL 124

Query: 167  DILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHA---PFGRNSL 223
            DILNMYRKE+K I EVY EVA LF+DH DLL EFT FLPDTSA  ST  +   P     +
Sbjct: 125  DILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTNDSVKVPVRDRGI 184

Query: 224  QRFNERNSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKR 283
            +         P MRQ+ +DK    +DR+ +   +R L  E+ ++D +++++   KE+ +R
Sbjct: 185  KSL-------PTMRQIDLDK----KDRIITSHPNRALKTENMDVDHERSLLKDSKEEVRR 233

Query: 284  -DRRIRDQDERDPDLDNSRDLTSQR---FRDKKKTVKKAE--------GMYGEAFS---- 327
             D++    D+RD       D  S +   F  KKK ++K +           G+ FS    
Sbjct: 234  IDKKNDFMDDRDRKDYRGLDHDSHKEHFFNSKKKLIRKDDDSAEMSDQAREGDKFSGAIP 293

Query: 328  -----------------------FCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQN 364
                                   F ++VK KL ++D+ Q FL+CLN+++  II + +LQ+
Sbjct: 294  SSSTYDEKGFIIDFLESHSQELAFVDRVKAKLDTADN-QEFLRCLNLYSKEIISQPELQS 352

Query: 365  LVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLST----------------DAH 408
            LV+DL+G + DLMD FK FL +C+  +G L+G++SK   ST                +  
Sbjct: 353  LVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKSKSSTFYNILLTYLFGQSLWSEGK 412

Query: 409  LSRSSKLEDKDKDQKRE-MDGAKEKDRYKEKY--------MGKSIQELDLSDCKRCTPSY 459
              + +K  DKD D++RE ++  +E+DR KE+           K I ELDLS+C++CTPSY
Sbjct: 413  CPQPTKSLDKDTDREREKIERYRERDREKERLEKVAASQKWAKPISELDLSNCEQCTPSY 472

Query: 460  RLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 519
            R LP +YPIP ASQ+ E+G+QVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF+CEDDRFE
Sbjct: 473  RRLPKNYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFE 532

Query: 520  LDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIERLYGDHGLDVID 579
            LD+LLESV SA+ R EEL   IN N++  +    IEDH T LNLRCIERLY DHGLDV+D
Sbjct: 533  LDMLLESVISATNRVEELLAKINSNELKTDTPICIEDHLTALNLRCIERLYSDHGLDVLD 592

Query: 580  ILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSK 639
            +L+KN   ALPVILTRLKQKQEEW RCR++FNKVWA+IY KN+++SLDHRSFYFKQQDSK
Sbjct: 593  LLKKNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQDSK 652

Query: 640  NLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYS 699
            NLSTK+L+AEIKEI EK + ED  + ++AA NR+ +  ++ F+Y D  +HEDLY+L++YS
Sbjct: 653  NLSTKALLAEIKEISEKKRGEDDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLIKYS 712

Query: 700  CEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVEDRKAGHSSRNFAASNVGGDGS 759
            C E+ S+ E L+K+M++W+ FLEP+ GV S+  G E  ED          A  +   D  
Sbjct: 713  CGEMCST-EQLDKVMKVWTEFLEPIFGVPSRPQGAEDRED----------AVKSTNHDRE 761

Query: 760  PHRDSIS--TNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGSVGGELVCRDDQLMD 817
               D++S    + +  S ++    +V E   + + S    D  +      L+  D+   D
Sbjct: 762  DQEDAVSPQNGASIANSMRSNGPRKVNESNQVRQASELDKDVTSSKTSDALLSCDNTQND 821

Query: 818  KGLKKVECSDKAGFSKQFASDEQGVKNN--PSIAIRGENSLNRTNLDV-----------S 864
            K  K +   D+   +KQ  S E+   +N  P   +  + +   ++L V           S
Sbjct: 822  KMPKNLTTPDERAETKQAVSIERAHNSNALPLDGLLPQRNGKISSLSVADEEWYPFLLYS 881

Query: 865  PGCVSAPSRPT-DADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENSKVKSHEESSGP 923
            PG  ++  +P   +     K   VN P VE GD   PV + NG +         E  +G 
Sbjct: 882  PGLSNSNPKPALTSGTEELKPNYVNGPRVEIGD--NPV-IPNGTVA--------EWFAGE 930

Query: 924  CKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPETGGD 982
             KVE+EEGELSP GD EED +  + +++ ++++KSK N                  T  D
Sbjct: 931  AKVEREEGELSPTGDFEEDNYAVHGENDMEALSKSKEN----------------DATADD 974

Query: 983  NDADADDEDSENVSEAGEDVSGSESA-GDECFQEDHEEDDIEHDDVDGKAESEGEA-EGM 1040
              A    + S N S  G DVSG++S  G++C++    EDDI+H+    K ESEGEA EGM
Sbjct: 975  ASAPRSSDGSGNTSHNG-DVSGTDSGDGEDCYR----EDDIDHN----KVESEGEAEEGM 1025

Query: 1041 CDAQGG--GDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSR----VFYGNDDFYALF 1094
             D      GD   L +S + L  VKPL K+V    + ++  DSR    VFYGND FY LF
Sbjct: 1026 SDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYVLF 1085

Query: 1095 RLHQILYERILSAKINSMSAEMKWKAKDASSP 1126
            RLHQILY+RILSAKINS S + KWK  + ++P
Sbjct: 1086 RLHQILYDRILSAKINSSSPDRKWKTSNPTNP 1117


>pir||C96723 hypothetical protein F20P5.21 [imported] - Arabidopsis thaliana
            gi|2194132|gb|AAB61107.1| F20P5.21 gene product
            [Arabidopsis thaliana]
          Length = 1383

 Score =  881 bits (2277), Expect = 0.0
 Identities = 541/1183 (45%), Positives = 717/1183 (59%), Gaps = 165/1183 (13%)

Query: 50   TTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGH 109
            +++QKLTTNDAL+YLK VKD FQD+R+KYD FLEVMKDFKAQR DT GVI RVKELFKG+
Sbjct: 5    SSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFKGN 64

Query: 110  NHLIFGFNTFLPKGYEITL-DEDEAPA--KKTVEFEEAISFVNKIKKRFQSDEHVYKSFL 166
              LI GFNTFLPKG+EITL  ED+ PA  KK VEFEEAISFVNKIK RFQ D+ VYKSFL
Sbjct: 65   RELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKSFL 124

Query: 167  DILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHA---PFGRNSL 223
            DILNMYRKE+K I EVY EVA LF+DH DLL EFT FLPDTSA  ST  +   P     +
Sbjct: 125  DILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTNDSVKVPVRDRGI 184

Query: 224  QRFNERNSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKR 283
            +         P MRQ+ +DK    +DR+ +   +R L  E+ ++D +++++   KE+ +R
Sbjct: 185  KSL-------PTMRQIDLDK----KDRIITSHPNRALKTENMDVDHERSLLKDSKEEVRR 233

Query: 284  -DRRIRDQDERDPDLDNSRDLTSQR---FRDKKKTVKKAE--------GMYGEAFS---- 327
             D++    D+RD       D  S +   F  KKK ++K +           G+ FS    
Sbjct: 234  IDKKNDFMDDRDRKDYRGLDHDSHKEHFFNSKKKLIRKDDDSAEMSDQAREGDKFSGAIP 293

Query: 328  -----------------------FCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQN 364
                                   F ++VK KL ++D+ Q FL+CLN+++  II + +LQ+
Sbjct: 294  SSSTYDEKGFIIDFLESHSQELAFVDRVKAKLDTADN-QEFLRCLNLYSKEIISQPELQS 352

Query: 365  LVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLST----------------DAH 408
            LV+DL+G + DLMD FK FL +C+  +G L+G++SK   ST                +  
Sbjct: 353  LVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKSKSSTFYNILLTYLFGQSLWSEGK 412

Query: 409  LSRSSKLEDKDKDQKRE-MDGAKEKDRYKEKY--------MGKSIQELDLSDCKRCTPSY 459
              + +K  DKD D++RE ++  +E+DR KE+           K I ELDLS+C++CTPSY
Sbjct: 413  CPQPTKSLDKDTDREREKIERYRERDREKERLEKVAASQKWAKPISELDLSNCEQCTPSY 472

Query: 460  RLLPSD-----------YPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEE 508
            R LP +           YPIP ASQ+ E+G+QVLNDHWVSVTSGSEDYSFKHMRKNQYEE
Sbjct: 473  RRLPKNLNVHTYFVLLQYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEE 532

Query: 509  SLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIER 568
            SLF+CEDDRFELD+LLESV SA+ R EEL   IN N++  +    IEDH T LNLRCIER
Sbjct: 533  SLFKCEDDRFELDMLLESVISATNRVEELLAKINSNELKTDTPICIEDHLTALNLRCIER 592

Query: 569  LYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDH 628
            LY DHGLDV+D+L+KN   ALPVILTRLKQKQEEW RCR++FNKVWA+IY KN+++SLDH
Sbjct: 593  LYSDHGLDVLDLLKKNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDH 652

Query: 629  RSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGI 688
            RSFYFKQQDSKNLSTK+L+AEIKEI EK + ED  + ++AA NR+ +  ++ F+Y D  +
Sbjct: 653  RSFYFKQQDSKNLSTKALLAEIKEISEKKRGEDDALLALAAGNRRTISSNMSFDYPDPDL 712

Query: 689  HEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVEDRKAGHSSRN 748
            HEDLY+L++YSC E+ S+ E L+K+M++W+ FLEP+ GV S+  G E  ED         
Sbjct: 713  HEDLYQLIKYSCGEMCST-EQLDKVMKVWTEFLEPIFGVPSRPQGAEDRED--------- 762

Query: 749  FAASNVGGDGSPHRDSIS--TNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGSVGG 806
             A  +   D     D++S    + +  S ++    +V E   + + S    D  +     
Sbjct: 763  -AVKSTNHDREDQEDAVSPQNGASIANSMRSNGPRKVNESNQVRQASELDKDVTSSKTSD 821

Query: 807  ELVCRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKNN--PSIAIRGENSLNRTNLDV- 863
             L+  D+   DK  K +   D+   +KQ  S E+   +N  P   +  + +   ++L V 
Sbjct: 822  ALLSCDNTQNDKMPKNLTTPDERAETKQAVSIERAHNSNALPLDGLLPQRNGKISSLSVA 881

Query: 864  ----------SPGCVSAPSRPT-DADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENS 912
                      SPG  ++  +P   +     K   VN P VE GD   PV + NG +    
Sbjct: 882  DEEWYPFLLYSPGLSNSNPKPALTSGTEELKPNYVNGPRVEIGD--NPV-IPNGTVA--- 935

Query: 913  KVKSHEESSGPCKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKSKHNIERRKYESRDR 971
                 E  +G  KVE+EEGELSP GD EED +  + +++ ++++KSK N           
Sbjct: 936  -----EWFAGEAKVEREEGELSPTGDFEEDNYAVHGENDMEALSKSKEN----------- 979

Query: 972  EEECGPETGGDNDADADDEDSENVSEAGEDVSGSESA-GDECFQEDHEEDDIEHDDVDGK 1030
                   T  D  A    + S N S  G DVSG++S  G++C++    EDDI+H+    K
Sbjct: 980  -----DATADDASAPRSSDGSGNTSHNG-DVSGTDSGDGEDCYR----EDDIDHN----K 1025

Query: 1031 AESEGEA-EGMCDAQGG--GDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSR----V 1083
             ESEGEA EGM D      GD   L +S + L  VKPL K+V    + ++  DSR    V
Sbjct: 1026 VESEGEAEEGMSDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQV 1085

Query: 1084 FYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSP 1126
            FYGND FY LFRLHQILY+RILSAKINS S + KWK  + ++P
Sbjct: 1086 FYGNDSFYVLFRLHQILYDRILSAKINSSSPDRKWKTSNPTNP 1128


>ref|XP_549869.1| transcriptional co-repressor -like [Oryza sativa (japonica
            cultivar-group)] gi|52076211|dbj|BAD44865.1|
            transcriptional co-repressor -like [Oryza sativa
            (japonica cultivar-group)]
          Length = 1243

 Score =  838 bits (2165), Expect = 0.0
 Identities = 491/1039 (47%), Positives = 643/1039 (61%), Gaps = 117/1039 (11%)

Query: 171  MYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERN 230
            MYRK++K I +VY EVA LF DH+DLLEEF  FLPDTS  P    AP  R  ++R +  +
Sbjct: 1    MYRKDNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTSVPPQAV-AP-SRPGIRRDDRTS 58

Query: 231  SMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKRDRRIRDQ 290
             + P  R  + DK        P  DR+   SV+ P++D      ++ + +R +DR   D+
Sbjct: 59   LVPPASRNEKRDKAH------PHADRE---SVDRPDLD------HVIQRRRPKDRHDYDR 103

Query: 291  DERDPDLDNSRDL----------------------------------TSQRFRDKKKTVK 316
             ++D +LD S+DL                                   S    D K  +K
Sbjct: 104  GDKDGELD-SKDLDIGLKRKPFPRKMEDPTSADAHHGGPLENHGILGASASLYDNKDALK 162

Query: 317  KAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDL 376
                +Y + F FCEKVKEKL   D YQ FLKCL+I++  II +++L+NLV D+L +H DL
Sbjct: 163  S---VYTQEFHFCEKVKEKLEH-DAYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDL 218

Query: 377  MDEFKDFLERCENIEGFLAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYK 436
            MD F +FLE CENI+GFLAGV SK+       + ++ + ++  K  ++E D  ++   YK
Sbjct: 219  MDGFNEFLEHCENIDGFLAGVFSKRQTG---RIVKTEERKEGGKGTEKEPDRIEKVPAYK 275

Query: 437  E------------KYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLND 484
            E            KY+ K + ELDLS+C+RCTPSYRLLP  YP+P A  ++ELGA VLND
Sbjct: 276  EAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKTELGASVLND 335

Query: 485  HWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNNINEN 544
            HWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD+LLESV++A+KR EEL   + +N
Sbjct: 336  HWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDN 395

Query: 545  KISVEALSRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWN 604
             +  ++  RI++H T LNLRCIERLYGDHGLDV+D+LRKN + ALPVILTRLKQKQEEW+
Sbjct: 396  SLKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWS 455

Query: 605  RCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHII 664
            RCRSDFNKVWAEIYAKN++KSLDHRSFYFKQQD+KNLSTKSL+ EIKEI EK +KED ++
Sbjct: 456  RCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVL 515

Query: 665  QSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPM 724
             +IAA NR+P++P++ F+Y D  IHED+YK+++YSC EV SS + L+K++R+W+TFLEP+
Sbjct: 516  LAIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPI 575

Query: 725  LGVTSQSHGTERVEDRKAGHSSRNFAASNVG-------GDGSPH-RDSISTNSRLPKSDK 776
            LGV  ++HG E  +  K    +     + VG       G  + H  D      + P S  
Sbjct: 576  LGVQPRTHGAEDADAVKPKSRTTKSGLATVGEINTTAAGAVAKHGHDENIPQEQTPSSLA 635

Query: 777  NEVDGRVTEVKN----IHRTSVAANDKENGSVGGELVCRDDQLMDKGLKKVECSDKAGFS 832
              V+G  T+ +N    + RT+  A +  N +V G +     Q    G  ++        S
Sbjct: 636  RMVNGVATDTQNGFHDVDRTARRAEEPSNTAVNGRV-----QGASPGTNEI-----PAVS 685

Query: 833  KQFASDEQGVKNNPSIAIRGENSLNRTNLDVSPGCVSAPSRPTDADDSVAKSQTVN--LP 890
             Q    E+  +N P +A   ++   + NL+ + G V+A       +D+ A+++  N  LP
Sbjct: 686  TQNMPTERSAENIP-VARTEQHGNAKANLEPTSG-VNASRSSHAGNDTAAEARAGNETLP 743

Query: 891  LVEGGDIAAPVPVAN-GVLVENSKVKSHEESS---GPCKVEKEEGELSPNGDSEED-FVA 945
             VEGG+        N G   E +K +   E+S      KVE+EEGELSPNGD EED F  
Sbjct: 744  SVEGGETGRSGSTLNGGGASEGNKGRLFNEASASHNTPKVEREEGELSPNGDFEEDNFAP 803

Query: 946  YRDSNAQSMAKSKHNIERRKYESRDREEECG-PETGGDNDADADD----------EDSEN 994
            + D     ++K+K     R ++ R  E +    E  G+NDADADD          EDSEN
Sbjct: 804  FEDGAVDGVSKAKEGSTSRPFQGRSGEAQPSCAEAAGENDADADDEGEESAQRSTEDSEN 863

Query: 995  VSEAGEDVSGSESA-GDECFQEDH--EEDDIEHDDVDGKAESEGEAEGMCDAQGGGDSSS 1051
             SE GED SGSES  G+EC +EDH  EE+D++HDD D KAESEGEAEG  +        S
Sbjct: 864  ASEGGEDASGSESGDGEECSREDHDEEEEDMDHDDQDAKAESEGEAEGTTETHDVEGGIS 923

Query: 1052 LPLSERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINS 1111
            LPLSERFL SVKPL KHV       + K SR+FYGND FY LFRLHQILYER+LSAK NS
Sbjct: 924  LPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNS 983

Query: 1112 MSAEMKWK-AKDASSPDPY 1129
             SAE KW+ +KD + PD Y
Sbjct: 984  SSAEKKWRTSKDTNPPDLY 1002


>dbj|BAC43533.1| putative transcriptional regulatory protein [Arabidopsis thaliana]
          Length = 543

 Score =  671 bits (1732), Expect = 0.0
 Identities = 348/544 (63%), Positives = 428/544 (77%), Gaps = 41/544 (7%)

Query: 1   MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
           MKR RDDIY A+ SQFKRP  SSRG+SY QS + GGG  G G         +QKLTT+DA
Sbjct: 1   MKRIRDDIY-ATGSQFKRPLGSSRGESYEQSPITGGGSIGEGG------INTQKLTTDDA 53

Query: 61  LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
           L+YLK+VK+MFQDQR+KYD+FLEVMKDFKAQ+TDT+GVI+RVKELFKGHN+LIFGFNTFL
Sbjct: 54  LTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFL 113

Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
           PKG+EITLD+ EAP+KKTVEFEEAISFVNKIK RFQ +E VYKSFL+ILNMYRK++KDI 
Sbjct: 114 PKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDIT 173

Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQ 240
           EVY+EV+TLF+DH DLLEEFTRFLPD S AP T+ A   R+  QR+++R S  P++R+M 
Sbjct: 174 EVYNEVSTLFEDHSDLLEEFTRFLPD-SLAPHTE-AQLLRSQAQRYDDRGSGPPLVRRMF 231

Query: 241 VDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRK------RDRRIRDQDERD 294
           ++K R RR+R  +   DRD SV+  +++DDK+M+ +H++QRK      R+RR RD ++ +
Sbjct: 232 MEKDR-RRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDNRERRSRDLEDGE 290

Query: 295 PDLDNSRDLTSQRFRDKKKTVKKAEG------------------MYGEAFSFCEKVKEKL 336
            + DN      Q F +K+K+ ++ EG                  MY +AF FCEKVKE+L
Sbjct: 291 AEQDN-----LQHFSEKRKSSRRMEGFEAYSGPASHSEKNNLKSMYNQAFLFCEKVKERL 345

Query: 337 SSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGF--L 394
            S DDYQ FLKCLN+F+NGII++ DLQNLV+D+LGK  DLMDEF  F ERCE+I+GF  L
Sbjct: 346 CSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESIDGFQHL 405

Query: 395 AGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKR 454
           AGVMSKKSL ++ +LSRS K E+KD++ KR+++ AKEK+R K+KYMGKSIQELDLSDC+R
Sbjct: 406 AGVMSKKSLGSEENLSRSVKGEEKDREHKRDVEAAKEKERSKDKYMGKSIQELDLSDCER 465

Query: 455 CTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCE 514
           CTPSYRLLP DYPIP+   R + GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCE
Sbjct: 466 CTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCE 525

Query: 515 DDRF 518
           DDRF
Sbjct: 526 DDRF 529


>ref|XP_493857.1| Similar to Arabidopsis chromosome I BAC genomic sequence (AC002396);
            unknown protein [Oryza sativa]
          Length = 1056

 Score =  642 bits (1655), Expect = 0.0
 Identities = 397/866 (45%), Positives = 516/866 (58%), Gaps = 122/866 (14%)

Query: 308  FRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDD-YQTFLKCLNIFNNGIIKKNDLQNLV 366
            F  K + ++K    + EA +F  K+K +    D  Y++FL  LN++    +    +Q++ 
Sbjct: 92   FAIKLQDLEKKPVDFMEAINFVNKIKARFQQEDHVYKSFLGILNMYR---LHNKSIQDVY 148

Query: 367  TD--LLGKHSDLMDEFKDFLERCENIEGFLA---GVMSKKS-------LSTDAHLSRSSK 414
             +  L   + DL++EFK FL         +    GV S+          + +A + +  +
Sbjct: 149  GEVPLFRDYPDLLEEFKHFLPDTSTAPEPVTVPRGVSSRHDDRGPLMPSARNAQIIKEFR 208

Query: 415  LEDKDKDQKREMDGAKE--------------KDRYKEKY-MGKSIQELDLSDCKRCTPSY 459
              +K K+ K E +  +E              +   K  Y + K I ELDLS+C+RCTPSY
Sbjct: 209  FCEKVKE-KLEPEAYQEFLKCLHIYSQEIITRSELKNLYNLCKPISELDLSNCQRCTPSY 267

Query: 460  RLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 519
            RLLP +YP+P AS R++LGA VLND WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE
Sbjct: 268  RLLPKNYPMPPASCRTDLGASVLNDLWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 327

Query: 520  LDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIERLYGDHGLDVID 579
            LD+LLESV  A KR EEL   + +N I  ++  RI++H T LNLRCIERLYGDHGLDV+D
Sbjct: 328  LDMLLESVIVAIKRVEELIEKMQDNSIKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMD 387

Query: 580  ILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSK 639
            +LRKN + ALPVILTRLKQKQEEW+RCRSDFNKVWAEIYAKN++KSLDHRSFYFKQQD+K
Sbjct: 388  VLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTK 447

Query: 640  NLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYS 699
            NLSTK+L+A IKE+ EK +KED ++ +IA+ NR+P++P++ FEY D  IHEDLY++++YS
Sbjct: 448  NLSTKALLAAIKEVNEKKRKEDDMLLTIASGNRRPIVPNMSFEYVDPEIHEDLYQIIKYS 507

Query: 700  CEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVEDRKAGHSSRNFAASNVGGDGS 759
            C EV SS + ++K+M++W+TFLEP+LGV  + HG   VED K  H+SR    S   G  +
Sbjct: 508  CGEVCSSSDQVDKVMKIWATFLEPILGVHPRGHG---VEDEK--HNSR----STKAGPAN 558

Query: 760  PHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGS----VGGELVCRDDQL 815
               ++ STN            G VT VK+ H   +   ++ + S    VGG  V  D Q 
Sbjct: 559  VEINNASTN------------GTVT-VKHAHSDEIVPKEQASCSRAILVGG--VAADAQN 603

Query: 816  MDKGLKKVECSDKAGFSKQFASDEQGVKNNPSIAIRGENSLNRTNLDVSPGCVSAPSRPT 875
              +  ++  C D+                                            RP 
Sbjct: 604  SLQDAERTVCRDE-------------------------------------------ERPK 620

Query: 876  DADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENSKVKSHEESSGPCKVEKEEGELSP 935
               D   ++ T   P V+ G+I  P    N    ++  +  +  S    KVE+EEGELSP
Sbjct: 621  TMLDRRLQNTT---PAVDSGEIRIPGSF-NSKDNKHCPINEYCGSHNHSKVEREEGELSP 676

Query: 936  NGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPETGGDNDADADD------ 989
            NGD  E+F  +   +   ++K+K +  RR  + R  +     E  G+ND DADD      
Sbjct: 677  NGDVGENFGPFDGVSVDGVSKAKEDSTRRLLQGRPMD---ATEFAGENDVDADDEGEESA 733

Query: 990  ---EDSENVSEAGEDVSGSESA-GDECFQEDHE-EDDIEHDDVDGKAESEGEAEGMCDAQ 1044
               EDSEN SEAGED SGSES  G+EC +EDHE EDD++ DD D KAESEGEA    +AQ
Sbjct: 734  QMMEDSENASEAGEDASGSESGDGEECSREDHEDEDDMDQDDPDAKAESEGEAAENTEAQ 793

Query: 1045 GGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERI 1104
                  SLP SER  ++VKPL KHV       E K S +FYGND FY LFRLHQILYERI
Sbjct: 794  DADAGISLPFSERSHNAVKPLAKHVPRALNDHEEKFSCIFYGNDSFYVLFRLHQILYERI 853

Query: 1105 LSAKINSMSAEMKWKA-KDASSPDPY 1129
            LSAK NS SAE KWKA KD + PD Y
Sbjct: 854  LSAKTNSSSAEKKWKASKDTNLPDQY 879



 Score =  219 bits (559), Expect = 3e-55
 Identities = 119/199 (59%), Positives = 142/199 (70%), Gaps = 6/199 (3%)

Query: 46  GGEATTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKEL 105
           G   + +QKLTTNDAL YLK VKD FQD+R+KYD FLEVM+DFK+ R DTAGVI RVK L
Sbjct: 14  GQGPSQNQKLTTNDALLYLKAVKDKFQDKRDKYDEFLEVMRDFKSGRIDTAGVIIRVKTL 73

Query: 106 FKGHNHLIFGFNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSF 165
           F GH+ LI GFN FLPKG+ I L + E   KK V+F EAI+FVNKIK RFQ ++HVYKSF
Sbjct: 74  FNGHHELILGFNAFLPKGFAIKLQDLE---KKPVDFMEAINFVNKIKARFQQEDHVYKSF 130

Query: 166 LDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQR 225
           L ILNMYR  +K I +VY EV  LF+D+ DLLEEF  FLPDTS AP     P G +S  R
Sbjct: 131 LGILNMYRLHNKSIQDVYGEV-PLFRDYPDLLEEFKHFLPDTSTAPEPVTVPRGVSS--R 187

Query: 226 FNERNSMTPMMRQMQVDKQ 244
            ++R  + P  R  Q+ K+
Sbjct: 188 HDDRGPLMPSARNAQIIKE 206


>ref|NP_176197.2| paired amphipathic helix repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1159

 Score =  500 bits (1288), Expect = e-140
 Identities = 354/1003 (35%), Positives = 512/1003 (50%), Gaps = 153/1003 (15%)

Query: 143  EAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTR 202
            +A++++  +K  FQ ++  Y++FL ++  ++ +  D   V + V  LFK + DLL  F  
Sbjct: 45   DALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNT 104

Query: 203  FLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSV 262
            FLP             G     +  +     P+  Q+ ++     + R    DR     +
Sbjct: 105  FLPK------------GYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFL 152

Query: 263  EHPEMDDDKTMINLHKEQRKRDRRIRDQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMY 322
            +         ++N+++++ K    +  +              +  F+D        E + 
Sbjct: 153  D---------ILNMYRKETKSINEVYQE-------------VTLLFQDH-------EDLL 183

Query: 323  GEAFSFCEKVKEKLSSSDDY---QTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDE 379
            GE   F    +  +S +D      T  +  N    G+  K+  + +      ++++L D+
Sbjct: 184  GEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQ 243

Query: 380  FKDFLERCENIEGFLAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDR----- 434
             +D     EN+  +     S +SL+         K+ED +  Q  E +G  E+D      
Sbjct: 244  RED---GDENLVAY-----SAESLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGSQ 295

Query: 435  ---YKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTS 491
                   +M K+I ELDL+DC +CTPSYR LP DYPI   S R+ LG +VLNDHWVSVTS
Sbjct: 296  KNLLSTNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTS 355

Query: 492  GSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEAL 551
            GSEDYSFKHMRKNQYEESLFRCEDDRFELD+LLESVS+A KR E L   IN N IS+E  
Sbjct: 356  GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIETP 415

Query: 552  SRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFN 611
              I +H   L+ +CIERLYGD+GLDV+D L+KN   ALPVILTRLKQKQEEW RCR+DF 
Sbjct: 416  ICIREH---LSGKCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFR 472

Query: 612  KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAEN 671
            KVWAE+YAKNH+KSLDHRSFYFKQQDSKNLSTK LVAEIK+I E+  KED ++++IA   
Sbjct: 473  KVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKED-LLRAIAVGT 531

Query: 672  RQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQS 731
            +    P +EF Y+D  +H DLYKL++Y CEE+ ++ E  +K+M+LW TFLEPM GV S+S
Sbjct: 532  KPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICAT-EQSDKVMKLWVTFLEPMFGVPSRS 590

Query: 732  HGTERVEDRKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRV-TEVKNIH 790
               E ++D            + +  D   H D+           +N  DG + + +K + 
Sbjct: 591  ETIETMKD-----------VAKI-EDNQEHHDASEA------VKENTCDGSMASNLKPL- 631

Query: 791  RTSVAANDKENGSVGGELVCRDDQL-MDKGLKKVECSDKAGFSKQFASDEQGVKNNPSIA 849
             T     +KEN  + G    +D  +   + +++ +  D A  + + +   + V     + 
Sbjct: 632  -TPPKMPNKENPMIQGSSFAQDLPVNTGESIQQDKLHDVAAITNEDSQPSKLVSTRNDLI 690

Query: 850  IRGENSLNRTNLDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLV 909
            + G  + +R + DVS G         + ++                              
Sbjct: 691  MEGVENRSRVS-DVSMG-----GHKVEREEG----------------------------- 715

Query: 910  ENSKVKSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESR 969
            E S  +S E+ +   +V KE G L P     ++ ++  D   +  A     + R      
Sbjct: 716  ELSPTESCEQEN--FEVYKENG-LEPVQKLPDNEISNTDREPKEGACGTEAVTRSNALPE 772

Query: 970  DREEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVDG 1029
            D + +   +      ++ D+  S+ +  A      S+  G     E+H+  + E+     
Sbjct: 773  DDDNKITQKL-----SEGDENASKFIVSA------SKFGGQVSSDEEHKGAESEN----- 816

Query: 1030 KAESEGEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEE---MKDSRVFYG 1086
                  EA GM ++  G D S    SER+L  VKPL KHV     A E     DSRVFYG
Sbjct: 817  ------EAGGMVNSNEGEDGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYG 870

Query: 1087 NDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSPDPY 1129
            ND  Y LFRLHQ+LYERI SAKI+S   E KWKA D++S D Y
Sbjct: 871  NDSLYVLFRLHQMLYERIQSAKIHS---ERKWKAPDSTSTDSY 910



 Score =  251 bits (641), Expect = 1e-64
 Identities = 148/320 (46%), Positives = 192/320 (59%), Gaps = 35/320 (10%)

Query: 1   MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
           MKR R+++Y     Q + P  SSRG++ G+     GGG  GG            LTT DA
Sbjct: 1   MKRVREEVYVEP--QMRGPTVSSRGETNGRPSTISGGGTTGG------------LTTVDA 46

Query: 61  LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
           L+YLK VKDMFQD +EKY+ FL VMKDFKAQR DT GVIARVK+LFKG++ L+ GFNTFL
Sbjct: 47  LTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFL 106

Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
           PKGY+ITL  ++   KK V+F+ AI FVN+IK RF  D+  YK FLDILNMYRKE K I 
Sbjct: 107 PKGYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSIN 166

Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQ 240
           EVY EV  LF+DH DLL EF  FLPD   + S     F RN++ R  +RNS  P M    
Sbjct: 167 EVYQEVTLLFQDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPR--DRNSTFPGMHPKH 224

Query: 241 VDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMIN----LHKEQRKRDRRIRDQD----- 291
            +K + +R R   HD   +LS +  + D++    +     ++ Q     ++ D +     
Sbjct: 225 FEK-KIKRSR---HDEYTELSDQREDGDENLVAYSAESLANQGQWPGYPKVEDTEGIQIY 280

Query: 292 ------ERDPDLDNSRDLTS 305
                 ERDPD+ + ++L S
Sbjct: 281 ESNGGHERDPDIGSQKNLLS 300


>gb|AAD39330.1| Hypothetical protein [Arabidopsis thaliana] gi|25404243|pir||A96623
            hypothetical protein F23H11.20 [imported] - Arabidopsis
            thaliana
          Length = 1108

 Score =  437 bits (1124), Expect = e-120
 Identities = 330/1003 (32%), Positives = 481/1003 (47%), Gaps = 192/1003 (19%)

Query: 143  EAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTR 202
            +A++++  +K  FQ ++  Y++FL ++  ++ +  D   V + V  LFK + DLL  F  
Sbjct: 45   DALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNT 104

Query: 203  FLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSV 262
            FLP             G     +  +     P+  Q+ ++     + R    DR     +
Sbjct: 105  FLPK------------GYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFL 152

Query: 263  EHPEMDDDKTMINLHKEQRKRDRRIRDQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMY 322
            +         ++N+++++ K    +  +              +  F+D        E + 
Sbjct: 153  D---------ILNMYRKETKSINEVYQE-------------VTLLFQDH-------EDLL 183

Query: 323  GEAFSFCEKVKEKLSSSDDY---QTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDE 379
            GE   F    +  +S +D      T  +  N    G+  K+  + +      ++++L D+
Sbjct: 184  GEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQ 243

Query: 380  FKDFLERCENIEGFLAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDR----- 434
             +D     EN+  + AG    KSL+         K+ED +  Q  E +G  E+D      
Sbjct: 244  RED---GDENLVAYSAGNSLGKSLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGSQ 300

Query: 435  ---YKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTS 491
                   +M K+I ELDL+DC +CTPSYR LP DYPI   S R+ LG +VLNDHWVSVTS
Sbjct: 301  KNLLSTNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTS 360

Query: 492  GSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEAL 551
            GSEDYSFKHMRKNQYEESLF                                        
Sbjct: 361  GSEDYSFKHMRKNQYEESLF---------------------------------------- 380

Query: 552  SRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFN 611
             R ED       RCIERLYGD+GLDV+D L+KN   ALPVILTRLKQKQEEW RCR+DF 
Sbjct: 381  -RCEDD------RCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFR 433

Query: 612  KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAEN 671
            KVWAE+YAKNH+KSLDHRSFYFKQQDSKNLSTK LVAEIK+I E+  KED ++++IA   
Sbjct: 434  KVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKED-LLRAIAVGT 492

Query: 672  RQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQS 731
            +    P +EF Y+D  +H DLYKL++Y CEE+ ++ E  +K+M+LW TFLEPM GV S+S
Sbjct: 493  KPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICAT-EQSDKVMKLWVTFLEPMFGVPSRS 551

Query: 732  HGTERVEDRKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRV-TEVKNIH 790
               E ++D            + +  D   H D+           +N  DG + + +K + 
Sbjct: 552  ETIETMKD-----------VAKI-EDNQEHHDASEA------VKENTCDGSMASNLKPL- 592

Query: 791  RTSVAANDKENGSVGGELVCRDDQL-MDKGLKKVECSDKAGFSKQFASDEQGVKNNPSIA 849
             T     +KEN  + G    +D  +   + +++ +  D A  + + +   + V     + 
Sbjct: 593  -TPPKMPNKENPMIQGSSFAQDLPVNTGESIQQDKLHDVAAITNEDSQPSKLVSTRNDLI 651

Query: 850  IRGENSLNRTNLDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLV 909
            + G  + +R + DVS G         + ++                              
Sbjct: 652  MEGVENRSRVS-DVSMG-----GHKVEREEG----------------------------- 676

Query: 910  ENSKVKSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESR 969
            E S  +S E+ +   +V KE G L P     ++ ++  D   +  A     + R      
Sbjct: 677  ELSPTESCEQEN--FEVYKENG-LEPVQKLPDNEISNTDREPKEGACGTEAVTRSNALPE 733

Query: 970  DREEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVDG 1029
            D + +   +      ++ D+  S+ +  A      S+  G     E+H+  + E+     
Sbjct: 734  DDDNKITQKL-----SEGDENASKFIVSA------SKFGGQVSSDEEHKGAESEN----- 777

Query: 1030 KAESEGEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEE---MKDSRVFYG 1086
                  EA GM ++  G D S    SER+L  VKPL KHV     A E     DSRVFYG
Sbjct: 778  ------EAGGMVNSNEGEDGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYG 831

Query: 1087 NDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSPDPY 1129
            ND  Y LFRLHQ+LYERI SAKI+S   E KWKA D++S D Y
Sbjct: 832  NDSLYVLFRLHQMLYERIQSAKIHS---ERKWKAPDSTSTDSY 871



 Score =  249 bits (637), Expect = 3e-64
 Identities = 150/327 (45%), Positives = 194/327 (58%), Gaps = 44/327 (13%)

Query: 1   MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
           MKR R+++Y     Q + P  SSRG++ G+     GGG  GG            LTT DA
Sbjct: 1   MKRVREEVYVEP--QMRGPTVSSRGETNGRPSTISGGGTTGG------------LTTVDA 46

Query: 61  LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
           L+YLK VKDMFQD +EKY+ FL VMKDFKAQR DT GVIARVK+LFKG++ L+ GFNTFL
Sbjct: 47  LTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFL 106

Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
           PKGY+ITL  ++   KK V+F+ AI FVN+IK RF  D+  YK FLDILNMYRKE K I 
Sbjct: 107 PKGYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSIN 166

Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQ 240
           EVY EV  LF+DH DLL EF  FLPD   + S     F RN++ R  +RNS  P M    
Sbjct: 167 EVYQEVTLLFQDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPR--DRNSTFPGMHPKH 224

Query: 241 VDKQRYRRDRLPSHDRDRDLSVEHPEMDDD-----------KTMINLHKEQRKRDRRIRD 289
            +K + +R R   HD   +LS +  + D++           K++ N  + Q     ++ D
Sbjct: 225 FEK-KIKRSR---HDEYTELSDQREDGDENLVAYSAGNSLGKSLAN--QGQWPGYPKVED 278

Query: 290 QD-----------ERDPDLDNSRDLTS 305
            +           ERDPD+ + ++L S
Sbjct: 279 TEGIQIYESNGGHERDPDIGSQKNLLS 305


>ref|NP_172515.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1173

 Score =  414 bits (1063), Expect = e-113
 Identities = 273/731 (37%), Positives = 375/731 (50%), Gaps = 126/731 (17%)

Query: 322 YGEAFSFCEKVKEKLSSSDD-YQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEF 380
           + +A  F  K+K +    +  Y+ FL  LN++       +++   VT L   H DL+ EF
Sbjct: 166 FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 225

Query: 381 KDFLERC-ENIEGFLAGVMSKKSLSTDAHLS-----RSSKLED----------------- 417
            +FL  C E+       V   K  +T A  S     +  KLED                 
Sbjct: 226 VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSDQREDGDENLVT 285

Query: 418 ----------------------------KDKDQKREMDGAKEKDRYKE--KYMGKSIQEL 447
                                        D+ +K    G+++   +K   KY+G  I EL
Sbjct: 286 CSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGNHKSTTKYVGTPINEL 345

Query: 448 DLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYE 507
           DLS+C +CTPSYRLLP DY +   S R+ LG + LNDH VSVTSGSEDYSF HMRKNQYE
Sbjct: 346 DLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMRKNQYE 405

Query: 508 ESLFRCEDDRFELDLLLESVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIE 567
           ESLFRCEDDR+E+D+LL SVSSA K+ E L   +N N ISV++   IE H + +NLRCIE
Sbjct: 406 ESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHLSAMNLRCIE 465

Query: 568 RLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLD 627
           RLYGD+GLDV+D+L+KN   ALPVILTRLKQKQEEW RC SDF KVWAE+YAKNH+KSLD
Sbjct: 466 RLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLD 525

Query: 628 HRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGG 687
           HRSFYFKQQDSKNLSTK LVAE+K+I EK  +ED ++Q+IA        P LEF Y D  
Sbjct: 526 HRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED-LLQAIAVRVMPLFTPDLEFNYCDTQ 584

Query: 688 IHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVED-------- 739
           IHEDLY L++Y CEE+ ++ E  +K+M+LW TFLEP+ G+ S+S     +ED        
Sbjct: 585 IHEDLYLLIKYYCEEICAT-EQSDKVMKLWITFLEPIFGILSRSQDNLALEDVSKLKNNR 643

Query: 740 -----------------RKAGHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGR 782
                            RK   S +  +  N    GS  R+ +S N ++  +  +++   
Sbjct: 644 ELQDACLAVKETASGSNRKHPISPKRLSKDNTKMQGSSSREDVSANIKVKTAQPDKLQDD 703

Query: 783 VTEVKNIHRTSVAANDKENGSVGGELVCRDDQLM-DKGLKKVECSD------KAGFSKQF 835
                 + ++S   + K            +DQ+M D+G   V  +       + G     
Sbjct: 704 AAMTNEVIQSSKFVSPK------------NDQIMEDEGNHMVNAASVEKHELEEGELSPT 751

Query: 836 ASDEQGVKNNPSIAIRGENSLN---------RTNLDVSPGCVSAPSRPTDADDSVAKSQT 886
           AS EQ      +  + G+N+           R+N D            T A+D   K + 
Sbjct: 752 ASREQS-----NFEVNGQNAFKPLQKVTDNVRSNKDKQSCDKKGAKNKTRAEDD--KQEN 804

Query: 887 VNLPLVEGGDIAAPVPVANGVLVENSKVKSHEESSGPCKVE---KEEGELSPNGDSEEDF 943
            +        ++     A+ +LV  +KV  HEE++            GE++     E+  
Sbjct: 805 CH-------KLSENNKTASEMLVSGTKVSCHEENNRVMNCNGRGSVAGEMANGNQGEDGS 857

Query: 944 VAYRDSNAQSM 954
            A+ +   Q++
Sbjct: 858 FAFSERFLQTV 868



 Score =  211 bits (536), Expect = 1e-52
 Identities = 134/327 (40%), Positives = 181/327 (54%), Gaps = 53/327 (16%)

Query: 1   MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
           MKRAR+D+++ +  Q ++P  SSRG+                        T++   T DA
Sbjct: 52  MKRAREDVHTDT--QKRKPEVSSRGE------------------------TNKLPRTIDA 85

Query: 61  LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
           L+YLK VKD+F D +EKY+ FLE+MK+FKAQ  DT GVI R+K LFKG+  L+ GFNTFL
Sbjct: 86  LTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFL 145

Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
           PKGY+ITL  +E   K  V+F++AI FV KIK RF  DEH YK FLDILN+YRKE K I 
Sbjct: 146 PKGYKITLLPEEEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSIS 205

Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPD-TSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQM 239
           EVY EV  LFK H DLL EF  FLP+   +APST      +N++ R   + + T  M   
Sbjct: 206 EVYEEVTMLFKGHEDLLMEFVNFLPNCPESAPST------KNAVPR--HKGTATTAMHSD 257

Query: 240 QVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKRDRR---IRDQDERDPD 296
           +  KQR + +    H   R+        D D+ ++    +    + +    RD + R+  
Sbjct: 258 KKRKQRCKLEDYSGHSDQRE--------DGDENLVTCSADSPVGEGQPGYFRDYENREDT 309

Query: 297 LDNSRDLT-------SQRFRDKKKTVK 316
             ++ D T       SQ   + K T K
Sbjct: 310 ETDTADRTEKSAASGSQDIGNHKSTTK 336



 Score =  108 bits (271), Expect = 8e-22
 Identities = 79/211 (37%), Positives = 108/211 (50%), Gaps = 21/211 (9%)

Query: 925  KVEKEEGELSPNGDSEEDFVAYRDSNA-QSMAKSKHNIERRKYESRDREEECGPETGGDN 983
            K E EEGELSP    E+        NA + + K   N+   K      +++   + G  N
Sbjct: 740  KHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTDNVRSNK------DKQSCDKKGAKN 793

Query: 984  DADADDEDSENVSEAGED-VSGSESAGDECFQEDHEEDDIEHDDVDGKAESEGEAEGMCD 1042
               A+D+  EN  +  E+  + SE          HEE++    + +G+    GE      
Sbjct: 794  KTRAEDDKQENCHKLSENNKTASEMLVSGTKVSCHEENN-RVMNCNGRGSVAGEM----- 847

Query: 1043 AQGG-GDSSSLPLSERFLSSVKPLTKHVSAVSFAEE---MKDSRVFYGNDDFYALFRLHQ 1098
            A G  G+  S   SERFL +VKP+ KH+S    A E     DS+VFYGND +Y LFRLHQ
Sbjct: 848  ANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYYVLFRLHQ 907

Query: 1099 ILYERILSAKINSMSAEMKWKAKDASSPDPY 1129
            +LYERI +AK +S   E KWKA D ++PD Y
Sbjct: 908  MLYERIQTAKKHS---EKKWKAADNTTPDSY 935


>gb|AAD39565.1| T10O24.5 [Arabidopsis thaliana] gi|25402600|pir||C86238 protein
           T10O24.5 [imported] - Arabidopsis thaliana
          Length = 1164

 Score =  403 bits (1036), Expect = e-110
 Identities = 243/588 (41%), Positives = 332/588 (56%), Gaps = 74/588 (12%)

Query: 413 SKLEDKDKDQKREMDGAKEKDRYKE--KYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPT 470
           ++ +  D+ +K    G+++   +K   KY+G  I ELDLS+C +CTPSYRLLP DY +  
Sbjct: 329 TETDTADRTEKSAASGSQDIGNHKSTTKYVGTPINELDLSECTQCTPSYRLLPKDYAVEI 388

Query: 471 ASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVSSA 530
            S R+ LG + LNDH VSVTSGSEDYSF HMRKNQYEESLFRCEDDR+E+D+LL SVSSA
Sbjct: 389 PSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMRKNQYEESLFRCEDDRYEMDMLLGSVSSA 448

Query: 531 SKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALP 590
            K+ E L   +N N ISV++   IE H + +NLRCIERLYGD+GLDV+D+L+KN   ALP
Sbjct: 449 IKQVEILLEKMNNNTISVDSTICIEKHLSAMNLRCIERLYGDNGLDVMDLLKKNMHSALP 508

Query: 591 VILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEI 650
           VILTRLKQKQEEW RC SDF KVWAE+YAKNH+KSLDHRSFYFKQQDSKNLSTK LVAE+
Sbjct: 509 VILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKCLVAEV 568

Query: 651 KEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVFSSKELL 710
           K+I EK  +ED ++Q+IA        P LEF Y D  IHEDLY L++Y CEE+ ++ E  
Sbjct: 569 KDISEKKHQED-LLQAIAVRVMPLFTPDLEFNYCDTQIHEDLYLLIKYYCEEICAT-EQS 626

Query: 711 NKIMRLWSTFLEPMLGVTSQSHGTERVED-------------------------RKAGHS 745
           +K+M+LW TFLEP+ G+ S+S     +ED                         RK   S
Sbjct: 627 DKVMKLWITFLEPIFGILSRSQDNLALEDVSKLKNNRELQDACLAVKETASGSNRKHPIS 686

Query: 746 SRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGSVG 805
            +  +  N    GS  R+ +S N ++  +  +++         + ++S   + K      
Sbjct: 687 PKRLSKDNTKMQGSSSREDVSANIKVKTAQPDKLQDDAAMTNEVIQSSKFVSPK------ 740

Query: 806 GELVCRDDQLM-DKGLKKVECSD------KAGFSKQFASDEQGVKNNPSIAIRGENSLN- 857
                 +DQ+M D+G   V  +       + G     AS EQ      +  + G+N+   
Sbjct: 741 ------NDQIMEDEGNHMVNAASVEKHELEEGELSPTASREQS-----NFEVNGQNAFKP 789

Query: 858 --------RTNLDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLV 909
                   R+N D            T A+D   K +  +        ++     A+ +LV
Sbjct: 790 LQKVTDNVRSNKDKQSCDKKGAKNKTRAEDD--KQENCH-------KLSENNKTASEMLV 840

Query: 910 ENSKVKSHEESSGPCKVE---KEEGELSPNGDSEEDFVAYRDSNAQSM 954
             +KV  HEE++            GE++     E+   A+ +   Q++
Sbjct: 841 SGTKVSCHEENNRVMNCNGRGSVAGEMANGNQGEDGSFAFSERFLQTV 888



 Score =  209 bits (533), Expect = 3e-52
 Identities = 122/260 (46%), Positives = 158/260 (59%), Gaps = 35/260 (13%)

Query: 1   MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDA 60
           MKRAR+D+++ +  Q ++P  SSRG+                        T++   T DA
Sbjct: 52  MKRAREDVHTDT--QKRKPEVSSRGE------------------------TNKLPRTIDA 85

Query: 61  LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
           L+YLK VKD+F D +EKY+ FLE+MK+FKAQ  DT GVI R+K LFKG+  L+ GFNTFL
Sbjct: 86  LTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFL 145

Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
           PKGY+ITL  +E   K  V+F++AI FV KIK RF  DEH YK FLDILN+YRKE K I 
Sbjct: 146 PKGYKITLLPEEEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSIS 205

Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPD-TSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQM 239
           EVY EV  LFK H DLL EF  FLP+   +APST      +N++ R   + + T  M   
Sbjct: 206 EVYEEVTMLFKGHEDLLMEFVNFLPNCPESAPST------KNAVPR--HKGTATTAMHSD 257

Query: 240 QVDKQRYRRDRLPSHDRDRD 259
           +  KQR + +    H   R+
Sbjct: 258 KKRKQRCKLEDYSGHSDQRE 277



 Score =  108 bits (271), Expect = 8e-22
 Identities = 79/211 (37%), Positives = 108/211 (50%), Gaps = 21/211 (9%)

Query: 925  KVEKEEGELSPNGDSEEDFVAYRDSNA-QSMAKSKHNIERRKYESRDREEECGPETGGDN 983
            K E EEGELSP    E+        NA + + K   N+   K      +++   + G  N
Sbjct: 760  KHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTDNVRSNK------DKQSCDKKGAKN 813

Query: 984  DADADDEDSENVSEAGED-VSGSESAGDECFQEDHEEDDIEHDDVDGKAESEGEAEGMCD 1042
               A+D+  EN  +  E+  + SE          HEE++    + +G+    GE      
Sbjct: 814  KTRAEDDKQENCHKLSENNKTASEMLVSGTKVSCHEENN-RVMNCNGRGSVAGEM----- 867

Query: 1043 AQGG-GDSSSLPLSERFLSSVKPLTKHVSAVSFAEE---MKDSRVFYGNDDFYALFRLHQ 1098
            A G  G+  S   SERFL +VKP+ KH+S    A E     DS+VFYGND +Y LFRLHQ
Sbjct: 868  ANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYYVLFRLHQ 927

Query: 1099 ILYERILSAKINSMSAEMKWKAKDASSPDPY 1129
            +LYERI +AK +S   E KWKA D ++PD Y
Sbjct: 928  MLYERIQTAKKHS---EKKWKAADNTTPDSY 955



 Score = 40.0 bits (92), Expect = 0.44
 Identities = 31/115 (26%), Positives = 50/115 (42%), Gaps = 3/115 (2%)

Query: 322 YGEAFSFCEKVKEKLSSSDD-YQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEF 380
           + +A  F  K+K +    +  Y+ FL  LN++       +++   VT L   H DL+ EF
Sbjct: 166 FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 225

Query: 381 KDFLERC-ENIEGFLAGVMSKKSLSTDA-HLSRSSKLEDKDKDQKREMDGAKEKD 433
            +FL  C E+       V   K  +T A H  +  K   K +D     D  ++ D
Sbjct: 226 VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSDQREDGD 280


>ref|XP_510682.1| PREDICTED: similar to transcriptional co-repressor Sin3A;
           transcriptional regulator, SIN3A (yeast) [Pan
           troglodytes]
          Length = 1296

 Score =  278 bits (712), Expect = 6e-73
 Identities = 199/622 (31%), Positives = 306/622 (48%), Gaps = 105/622 (16%)

Query: 126 ITLDEDEAPA---KKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEH---KDI 179
           +T+    AP+    + VEF  AI++VNKIK RFQ    +YK+FL+IL+ Y+KE    K+ 
Sbjct: 309 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 368

Query: 180 G----------EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNER 229
           G          EVY++VA LFK+  DLL EF +FLPD +++                   
Sbjct: 369 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSS------------------- 409

Query: 230 NSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQ-RKRDRRIR 288
                      V   +   +++ S   D   +V+ P++++     + +  Q R+      
Sbjct: 410 -----------VLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQNGCQIRRHPTGTT 458

Query: 289 DQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKC 348
              ++ P L N +D            V K  G  G    F +KV++ L S++ Y+ FL+C
Sbjct: 459 PPVKKKPKLLNLKD-------SSMADVSKHGG--GTESLFFDKVRKALRSAEAYENFLRC 509

Query: 349 LNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLSTDAH 408
           L IFN  +I + +L  LV+  LGK  +L + FK+FL   E++                 H
Sbjct: 510 LVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESV-----------------H 552

Query: 409 LSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPI 468
           L    K        +R  +G                 E+D + CKR   SYR LP  Y  
Sbjct: 553 LETYPK--------ERATEGI--------------AMEIDYASCKRLGSSYRALPKSYQQ 590

Query: 469 PTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVS 528
           P  + R+ L  +VLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+  
Sbjct: 591 PKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL 650

Query: 529 SASKRAEELYNNINENKISVEALSRIEDHF----TVLNLRCIERLYGDHGLDVIDILRKN 584
           +  +  E +   ++      +A  R+++       V++ + ++R+Y D   D+ID LRKN
Sbjct: 651 ATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKN 710

Query: 585 PTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTK 644
           P+ A+P++L RLK K+EEW   +  FNKVW E   K + KSLDH+   FKQ D+K L +K
Sbjct: 711 PSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSK 770

Query: 645 SLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCE-EV 703
           SL+ EI+ I ++ Q+     Q+       P+ PHL   Y D  I ED   L+ +  + + 
Sbjct: 771 SLLNEIESIYDERQE-----QATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQT 825

Query: 704 FSSKELLNKIMRLWSTFLEPML 725
              KE   KI ++   F+  +L
Sbjct: 826 GIQKEDKYKIKQIMHHFIPDLL 847



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/66 (53%), Positives = 46/66 (69%)

Query: 67  VKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFLPKGYEI 126
           V+   Q QR K    L++MK+FK+Q  DT GVI+RV +LFKGH  LI GFNTFLP GY+I
Sbjct: 156 VQGQQQFQRLKVITRLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKI 215

Query: 127 TLDEDE 132
            +  ++
Sbjct: 216 EVQTND 221



 Score = 42.0 bits (97), Expect = 0.12
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 52  SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDT--AG-----------V 98
           +Q +  N A++Y+ ++K+ FQ Q + Y  FLE++  ++ ++ +   AG           V
Sbjct: 322 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 381

Query: 99  IARVKELFKGHNHLIFGFNTFLP 121
            A+V  LFK    L+  F  FLP
Sbjct: 382 YAQVARLFKNQEDLLSEFGQFLP 404


>ref|NP_056292.1| transcriptional co-repressor Sin3A [Homo sapiens]
           gi|37999759|sp|Q96ST3|SIN3A_HUMAN Paired amphipathic
           helix protein Sin3a (Transcriptional corepressor Sin3a)
           (Histone deacetylase complex subunit Sin3a)
          Length = 1273

 Score =  278 bits (710), Expect = 1e-72
 Identities = 198/622 (31%), Positives = 307/622 (48%), Gaps = 105/622 (16%)

Query: 126 ITLDEDEAPA---KKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEH---KDI 179
           +T+    AP+    + VEF  AI++VNKIK RFQ    +YK+FL+IL+ Y+KE    K+ 
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345

Query: 180 G----------EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNER 229
           G          EVY++VA LFK+  DLL EF +FLPD +++                   
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSS------------------- 386

Query: 230 NSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQ-RKRDRRIR 288
                      V   +   +++ S   D   +V+ P++++     + +  Q R+      
Sbjct: 387 -----------VLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQNGCQIRRHPTGTT 435

Query: 289 DQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKC 348
              ++ P L N +D +     D  K     E +      F +KV++ L S++ Y+ FL+C
Sbjct: 436 PPVKKKPKLLNLKDSS---MADASKHGGGTESL------FFDKVRKALRSAEAYENFLRC 486

Query: 349 LNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLSTDAH 408
           L IFN  +I + +L  LV+  LGK  +L + FK+FL   E++                 H
Sbjct: 487 LVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESV-----------------H 529

Query: 409 LSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPI 468
           L    K        +R  +G                 E+D + CKR   SYR LP  Y  
Sbjct: 530 LETYPK--------ERATEGI--------------AMEIDYASCKRLGSSYRALPKSYQQ 567

Query: 469 PTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVS 528
           P  + R+ L  +VLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+  
Sbjct: 568 PKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL 627

Query: 529 SASKRAEELYNNINENKISVEALSRIEDHF----TVLNLRCIERLYGDHGLDVIDILRKN 584
           +  +  E +   ++      +A  R+++       V++ + ++R+Y D   D+ID LRKN
Sbjct: 628 ATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKN 687

Query: 585 PTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTK 644
           P+ A+P++L RLK K+EEW   +  FNKVW E   K + KSLDH+   FKQ D+K L +K
Sbjct: 688 PSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSK 747

Query: 645 SLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCE-EV 703
           SL+ EI+ I ++ Q+     Q+       P+ PHL   Y D  I ED   L+ +  + + 
Sbjct: 748 SLLNEIESIYDERQE-----QATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQT 802

Query: 704 FSSKELLNKIMRLWSTFLEPML 725
              KE   KI ++   F+  +L
Sbjct: 803 GIQKEDKYKIKQIMHHFIPDLL 824



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 45/80 (56%), Positives = 58/80 (72%)

Query: 53  QKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHL 112
           Q+L   DALSYL QVK  F  Q + Y+ FL++MK+FK+Q  DT GVI+RV +LFKGH  L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 113 IFGFNTFLPKGYEITLDEDE 132
           I GFNTFLP GY+I +  ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 42/67 (61%)

Query: 139 VEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLE 198
           ++ E+A+S+++++K +F S   VY  FLDI+  ++ +  D   V S V+ LFK H DL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 199 EFTRFLP 205
            F  FLP
Sbjct: 181 GFNTFLP 187



 Score = 42.0 bits (97), Expect = 0.12
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 52  SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDT--AG-----------V 98
           +Q +  N A++Y+ ++K+ FQ Q + Y  FLE++  ++ ++ +   AG           V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358

Query: 99  IARVKELFKGHNHLIFGFNTFLP 121
            A+V  LFK    L+  F  FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381


>gb|AAP97288.1| MSIN3A [Homo sapiens]
          Length = 1273

 Score =  278 bits (710), Expect = 1e-72
 Identities = 198/622 (31%), Positives = 307/622 (48%), Gaps = 105/622 (16%)

Query: 126 ITLDEDEAPA---KKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEH---KDI 179
           +T+    AP+    + VEF  AI++VNKIK RFQ    +YK+FL+IL+ Y+KE    K+ 
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345

Query: 180 G----------EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNER 229
           G          EVY++VA LFK+  DLL EF +FLPD +++                   
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSS------------------- 386

Query: 230 NSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQ-RKRDRRIR 288
                      V   +   +++ S   D   +V+ P++++     + +  Q R+      
Sbjct: 387 -----------VLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQNGCQIRRHPTGTT 435

Query: 289 DQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKC 348
              ++ P L N +D +     D  K     E +      F +KV++ L S++ Y+ FL+C
Sbjct: 436 PPVKKKPKLLNLKDSS---MADASKHGGGTESL------FFDKVRKALRSAEAYENFLRC 486

Query: 349 LNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLSTDAH 408
           L IFN  +I + +L  LV+  LGK  +L + FK+FL   E++                 H
Sbjct: 487 LVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESV-----------------H 529

Query: 409 LSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPI 468
           L    K        +R  +G                 E+D + CKR   SYR LP  Y  
Sbjct: 530 LETYPK--------ERATEGI--------------AMEIDYASCKRLGSSYRALPKSYQQ 567

Query: 469 PTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVS 528
           P  + R+ L  +VLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+  
Sbjct: 568 PKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL 627

Query: 529 SASKRAEELYNNINENKISVEALSRIEDHF----TVLNLRCIERLYGDHGLDVIDILRKN 584
           +  +  E +   ++      +A  R+++       V++ + ++R+Y D   D+ID LRKN
Sbjct: 628 ATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKN 687

Query: 585 PTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTK 644
           P+ A+P++L RLK K+EEW   +  FNKVW E   K + KSLDH+   FKQ D+K L +K
Sbjct: 688 PSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSK 747

Query: 645 SLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCE-EV 703
           SL+ EI+ I ++ Q+     Q+       P+ PHL   Y D  I ED   L+ +  + + 
Sbjct: 748 SLLNEIESIYDERQE-----QATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQT 802

Query: 704 FSSKELLNKIMRLWSTFLEPML 725
              KE   KI ++   F+  +L
Sbjct: 803 GIQKEDKYKIKQIMHHFIPDLL 824



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 45/80 (56%), Positives = 58/80 (72%)

Query: 53  QKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHL 112
           Q+L   DALSYL QVK  F  Q + Y+ FL++MK+FK+Q  DT GVI+RV +LFKGH  L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 113 IFGFNTFLPKGYEITLDEDE 132
           I GFNTFLP GY+I +  ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 42/67 (61%)

Query: 139 VEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLE 198
           ++ E+A+S+++++K +F S   VY  FLDI+  ++ +  D   V S V+ LFK H DL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 199 EFTRFLP 205
            F  FLP
Sbjct: 181 GFNTFLP 187



 Score = 42.0 bits (97), Expect = 0.12
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 52  SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDT--AG-----------V 98
           +Q +  N A++Y+ ++K+ FQ Q + Y  FLE++  ++ ++ +   AG           V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358

Query: 99  IARVKELFKGHNHLIFGFNTFLP 121
            A+V  LFK    L+  F  FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381


>dbj|BAB55197.1| unnamed protein product [Homo sapiens]
          Length = 1026

 Score =  278 bits (710), Expect = 1e-72
 Identities = 198/622 (31%), Positives = 307/622 (48%), Gaps = 105/622 (16%)

Query: 126 ITLDEDEAPA---KKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEH---KDI 179
           +T+    AP+    + VEF  AI++VNKIK RFQ    +YK+FL+IL+ Y+KE    K+ 
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345

Query: 180 G----------EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNER 229
           G          EVY++VA LFK+  DLL EF +FLPD +++                   
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSS------------------- 386

Query: 230 NSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQ-RKRDRRIR 288
                      V   +   +++ S   D   +V+ P++++     + +  Q R+      
Sbjct: 387 -----------VLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQNGCQIRRHPTGTT 435

Query: 289 DQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKC 348
              ++ P L N +D +     D  K     E +      F +KV++ L S++ Y+ FL+C
Sbjct: 436 PPVKKKPKLLNLKDSS---MADASKHGGGTESL------FFDKVRKALRSAEAYENFLRC 486

Query: 349 LNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLSTDAH 408
           L IFN  +I + +L  LV+  LGK  +L + FK+FL   E++                 H
Sbjct: 487 LVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESV-----------------H 529

Query: 409 LSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPI 468
           L    K        +R  +G                 E+D + CKR   SYR LP  Y  
Sbjct: 530 LETYPK--------ERATEGI--------------AMEIDYASCKRLGSSYRALPKSYQQ 567

Query: 469 PTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVS 528
           P  + R+ L  +VLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+  
Sbjct: 568 PKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL 627

Query: 529 SASKRAEELYNNINENKISVEALSRIEDHF----TVLNLRCIERLYGDHGLDVIDILRKN 584
           +  +  E +   ++      +A  R+++       V++ + ++R+Y D   D+ID LRKN
Sbjct: 628 ATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKN 687

Query: 585 PTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTK 644
           P+ A+P++L RLK K+EEW   +  FNKVW E   K + KSLDH+   FKQ D+K L +K
Sbjct: 688 PSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSK 747

Query: 645 SLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCE-EV 703
           SL+ EI+ I ++ Q+     Q+       P+ PHL   Y D  I ED   L+ +  + + 
Sbjct: 748 SLLNEIESIYDERQE-----QATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQT 802

Query: 704 FSSKELLNKIMRLWSTFLEPML 725
              KE   KI ++   F+  +L
Sbjct: 803 GIQKEDKYKIKQIMHHFIPDLL 824



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 45/80 (56%), Positives = 58/80 (72%)

Query: 53  QKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHL 112
           Q+L   DALSYL QVK  F  Q + Y+ FL++MK+FK+Q  DT GVI+RV +LFKGH  L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 113 IFGFNTFLPKGYEITLDEDE 132
           I GFNTFLP GY+I +  ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 42/67 (61%)

Query: 139 VEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLE 198
           ++ E+A+S+++++K +F S   VY  FLDI+  ++ +  D   V S V+ LFK H DL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 199 EFTRFLP 205
            F  FLP
Sbjct: 181 GFNTFLP 187



 Score = 42.0 bits (97), Expect = 0.12
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 52  SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDT--AG-----------V 98
           +Q +  N A++Y+ ++K+ FQ Q + Y  FLE++  ++ ++ +   AG           V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358

Query: 99  IARVKELFKGHNHLIFGFNTFLP 121
            A+V  LFK    L+  F  FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381


>dbj|BAC04801.1| unnamed protein product [Homo sapiens]
          Length = 810

 Score =  276 bits (706), Expect = 3e-72
 Identities = 192/592 (32%), Positives = 294/592 (49%), Gaps = 104/592 (17%)

Query: 126 ITLDEDEAPA---KKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEH---KDI 179
           +T+    AP+    + VEF  AI++VNKIK RFQ    +YK+FL+IL+ Y+KE    K+ 
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345

Query: 180 G----------EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNER 229
           G          EVY++VA LFK+  DLL EF +FLPD +++                   
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSS------------------- 386

Query: 230 NSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQ-RKRDRRIR 288
                      V   +   +++ S   D   +V+ P++++     + +  Q R+      
Sbjct: 387 -----------VLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQNGCQIRRHPTGTT 435

Query: 289 DQDERDPDLDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKC 348
              ++ P L N +D +     D  K     E +      F +KV++ L S++ Y+ FL+C
Sbjct: 436 PPVKKKPKLLNLKDSS---MADASKHGGGTESL------FFDKVRKALRSAEAYENFLRC 486

Query: 349 LNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSKKSLSTDAH 408
           L IFN  +I + +L  LV+  LGK  +L + FK+FL   E++                 H
Sbjct: 487 LVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESV-----------------H 529

Query: 409 LSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPI 468
           L    K        +R  +G                 E+D + CKR   SYR LP  Y  
Sbjct: 530 LETYPK--------ERATEGI--------------AMEIDYASCKRLGSSYRALPKSYQQ 567

Query: 469 PTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDLLLESVS 528
           P  + R+ L  +VLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+  
Sbjct: 568 PKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL 627

Query: 529 SASKRAEELYNNINENKISVEALSRIEDHF----TVLNLRCIERLYGDHGLDVIDILRKN 584
           +  +  E +   ++      +A  R+++       V++ + ++R+Y D   D+ID LRKN
Sbjct: 628 ATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKN 687

Query: 585 PTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTK 644
           P+ A+P++L RLK K+EEW   +  FNKVW E   K + KSLDH+   FKQ D+K L +K
Sbjct: 688 PSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSK 747

Query: 645 SLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLV 696
           SL+ EI+ I ++ Q+     Q+       P+ PHL   Y D  I ED   L+
Sbjct: 748 SLLNEIESIYDERQE-----QATEENAGVPVGPHLSLAYEDKQILEDAAALI 794



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 45/80 (56%), Positives = 58/80 (72%)

Query: 53  QKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHL 112
           Q+L   DALSYL QVK  F  Q + Y+ FL++MK+FK+Q  DT GVI+RV +LFKGH  L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 113 IFGFNTFLPKGYEITLDEDE 132
           I GFNTFLP GY+I +  ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 42/67 (61%)

Query: 139 VEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLE 198
           ++ E+A+S+++++K +F S   VY  FLDI+  ++ +  D   V S V+ LFK H DL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 199 EFTRFLP 205
            F  FLP
Sbjct: 181 GFNTFLP 187



 Score = 42.0 bits (97), Expect = 0.12
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 52  SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDT--AG-----------V 98
           +Q +  N A++Y+ ++K+ FQ Q + Y  FLE++  ++ ++ +   AG           V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358

Query: 99  IARVKELFKGHNHLIFGFNTFLP 121
            A+V  LFK    L+  F  FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.312    0.131    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,958,270,895
Number of Sequences: 2540612
Number of extensions: 90121937
Number of successful extensions: 693066
Number of sequences better than 10.0: 4674
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 3764
Number of HSP's that attempted gapping in prelim test: 604129
Number of HSP's gapped (non-prelim): 37297
length of query: 1129
length of database: 863,360,394
effective HSP length: 139
effective length of query: 990
effective length of database: 510,215,326
effective search space: 505113172740
effective search space used: 505113172740
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 81 (35.8 bits)