BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0081b.3
(322 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB41132.1| putative protein [Arabidopsis thaliana] gi|21537... 219 8e-56
gb|AAX95764.1| hypothetical protein protein [Lycopersicon escule... 215 2e-54
dbj|BAB10860.1| unnamed protein product [Arabidopsis thaliana] g... 191 3e-47
emb|CAD41040.2| OSJNBa0060P14.3 [Oryza sativa (japonica cultivar... 165 2e-39
emb|CAE76013.1| B1358B12.22 [Oryza sativa (japonica cultivar-gro... 155 1e-36
gb|AAL86287.1| unknown protein [Arabidopsis thaliana] 155 2e-36
gb|AAQ62440.1| At1g74870 [Arabidopsis thaliana] gi|15221416|ref|... 108 2e-22
gb|AAW41598.1| transcriptional repressor, putative [Cryptococcus... 69 2e-10
gb|AAF66693.2| NOT4p [Candida albicans] 67 5e-10
emb|CAG89618.1| unnamed protein product [Debaryomyces hansenii C... 67 7e-10
ref|NP_010991.1| Component of the CCR4-NOT transcription regulat... 67 9e-10
gb|AAO51113.1| similar to Dictyostelium discoideum (Slime mold).... 67 9e-10
ref|XP_644313.1| hypothetical protein DDB0217593 [Dictyostelium ... 67 9e-10
gb|AAS51856.1| ADL064Wp [Ashbya gossypii ATCC 10895] gi|45187809... 66 1e-09
emb|CAG60788.1| unnamed protein product [Candida glabrata CBS138... 65 3e-09
emb|CAA91192.1| SPAC16C9.04c [Schizosaccharomyces pombe] gi|1911... 64 8e-09
gb|EAL88733.1| CCR4-NOT core complex subunit Not4, putative [Asp... 64 8e-09
emb|CAH01409.1| unnamed protein product [Kluyveromyces lactis NR... 64 8e-09
emb|CAD56154.1| CCr4/NOT complex/transcription factor subunit [K... 64 8e-09
emb|CAG77692.1| unnamed protein product [Yarrowia lipolytica CLI... 63 1e-08
>emb|CAB41132.1| putative protein [Arabidopsis thaliana] gi|21537154|gb|AAM61495.1|
unknown [Arabidopsis thaliana]
gi|62320901|dbj|BAD93892.1| hypothetical protein
[Arabidopsis thaliana] gi|66865968|gb|AAY57618.1| RING
finger family protein [Arabidopsis thaliana]
gi|15228327|ref|NP_190390.1| expressed protein
[Arabidopsis thaliana] gi|7487127|pir||T06676
hypothetical protein T17F15.60 - Arabidopsis thaliana
Length = 319
Score = 219 bits (558), Expect = 8e-56
Identities = 137/289 (47%), Positives = 175/289 (60%), Gaps = 26/289 (8%)
Query: 13 KKKRTNGSAKLKQIKLDVRREQWLSRVKKGCNVDSNGRMDNCPSSKHTASE--ENRSSCK 70
KKKRTN SAKLKQ KL +RREQWLS+V + + G + S++ SE + R +
Sbjct: 22 KKKRTNRSAKLKQSKLGLRREQWLSQVA----MINKGDKEEMESNRRIGSEKPDQRDLPR 77
Query: 71 EMTRKGEDIEGTCIQDSDSRSTINSPDRSTYSHDESSGKDFSGSSSNSISTSCSGNDSEE 130
+ ED GT +S S NSP+ + +S +FS SSS+ SCSGN +EE
Sbjct: 78 PVENLDEDNNGTHRHESFIESLSNSPN--SILSGMNSIPNFSSSSSSGSGGSCSGNITEE 135
Query: 131 ED--DDGCLDDWEAVADALYANDKSHSVVS--ESPAEHEAECRYTVLEDDKNPRVDFSKA 186
ED DDGCLDDWEA+ADAL A+D+ H + ES EHE + + + L + + +KA
Sbjct: 136 EDADDDGCLDDWEAIADALAADDEKHEKENPPESCQEHE-DIKQSALIGGADVVLRDAKA 194
Query: 187 DFKSEVPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNSNWRGSRKTVPWAWQTIISQP 246
D S+ + K N+ AW+PDD LRP+ LPNL KQR+ P+ N S TV P
Sbjct: 195 D--SQRRKQKSNQ-AWRPDDKLRPQGLPNLEKQRSFPV-MNLHFSSVTVV---------P 241
Query: 247 SQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLYD 295
S CPICYEDLD+TDS+FLPC CGF LCLFCHK I + D RCP CRK Y+
Sbjct: 242 SSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPYE 290
>gb|AAX95764.1| hypothetical protein protein [Lycopersicon esculentum]
Length = 354
Score = 215 bits (547), Expect = 2e-54
Identities = 143/330 (43%), Positives = 181/330 (54%), Gaps = 30/330 (9%)
Query: 13 KKKRTNGSAKLKQIKLDVRREQWLSRVK-KGCNVDSNGRMDNCPSSKHTASEENRSSCKE 71
KKKR N +AKLKQ K D RREQWLS+ K K + NG C +E+ + K
Sbjct: 23 KKKRANRTAKLKQSKRDARREQWLSQGKNKVSKQELNGGGGVCEQGMQVTNEKGQLMKKF 82
Query: 72 MTR---KGEDIEGTCIQDSDSRSTINSPDRSTYSHDES--SGKDFSGSSSNSISTS---- 122
+ + E+ G SD S NSP T S E SG +F+G S +S S+S
Sbjct: 83 AIKPRGEAEESGGYMNTYSDFDSPSNSPTSHTSSVLEGNYSGTNFTGGSGSSSSSSSGGF 142
Query: 123 ------CSGNDSEE--EDDDGCLDDWEAVADALYANDKS----HSVVSESPAEHEAECRY 170
CS + SEE E DD CLDDWEAVADAL A DK +S + +P H + +
Sbjct: 143 SSSGGCCSVSMSEEDNEGDDDCLDDWEAVADALAATDKEQEQHNSSLDSAPQVHMSFQQE 202
Query: 171 TVLEDDKNPRVDFSKADFKSE--VPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNSNW 228
+ D K P +D S+ + K +P + +AW+PDD RP+ LPNLSKQ P+NS
Sbjct: 203 --VSDGKVPALDTSQQNPKGRGTIPVFPVSFQAWRPDDEFRPQSLPNLSKQYTFPMNSG- 259
Query: 229 RGSRKTVPWAWQTIISQPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCP 288
R R W ++ + P+ CPIC EDLD TD+SFLPC CGF LCLFCHKKILE D RCP
Sbjct: 260 RHCRGGSVWGCKSA-AIPTSCPICCEDLDFTDTSFLPCPCGFRLCLFCHKKILEEDGRCP 318
Query: 289 SCRKLYDH--VDGNVGLNIGAKAFCITQSC 316
+CRK Y H V G + G F + +SC
Sbjct: 319 ACRKQYKHDTVGGETTKDAGGLMFKVARSC 348
>dbj|BAB10860.1| unnamed protein product [Arabidopsis thaliana]
gi|15241998|ref|NP_201096.1| expressed protein
[Arabidopsis thaliana]
Length = 327
Score = 191 bits (484), Expect = 3e-47
Identities = 124/301 (41%), Positives = 153/301 (50%), Gaps = 40/301 (13%)
Query: 13 KKKRTNGSAKLKQIKLDVRREQWLSRVKKGCNVDSNGRMDNCPSSKHTASEENRSSCKEM 72
KKKR N SAK+KQ KL +RREQWLS+V R N H S +
Sbjct: 20 KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEERSVNRSQKPHHESSDK------- 72
Query: 73 TRKGEDIEG---TCIQDSDSRSTINSPDRSTYSHDESSGKDFSGSSSNSISTSCSGNDSE 129
R+ ED G +S S NS TYS SG+ S SS+S S CSGN +E
Sbjct: 73 VRREEDNNGGNNLLHHESFMESPSNSSVGGTYSSTNFSGR--SSRSSSSSSGFCSGNITE 130
Query: 130 EE----DDDGCLDDWEAVADALYANDKSHSVVSESPAEHEAE-----------CRYTVLE 174
EE DDDGC+DDWEAVADAL A ++ P E E C ++ +
Sbjct: 131 EENVDDDDDGCVDDWEAVADALAAEEEIEK--KSRPLESVKEQVSVGQSASNVCDSSISD 188
Query: 175 DDKNPRVDFSKADFKSEVPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNSNWRGSRKT 234
V+ K + + + RAW+ DD LRP+ LPNL+KQ + P S
Sbjct: 189 ASDVVGVEDPKQECLRVSSRKQTSNRAWRLDDDLRPQGLPNLAKQLSFPELDKRFSS--- 245
Query: 235 VPWAWQTIISQPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLY 294
++ PS CPICYEDLD+TDS+FLPC CGF LCLFCHK I + D RCP CRK Y
Sbjct: 246 --------VAIPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPY 297
Query: 295 D 295
+
Sbjct: 298 E 298
>emb|CAD41040.2| OSJNBa0060P14.3 [Oryza sativa (japonica cultivar-group)]
Length = 327
Score = 165 bits (417), Expect = 2e-39
Identities = 128/320 (40%), Positives = 155/320 (48%), Gaps = 60/320 (18%)
Query: 12 SKKKRTN-GSAKLKQIKLDVRREQWLSRVKKG----CNVDSNGRMDNCPS----SKHTAS 62
+KKKR N SAKLKQ KLD RREQWLS+VK G + G N S S H
Sbjct: 16 AKKKRGNRSSAKLKQCKLDARREQWLSQVKDGKEAKASTSPTGTEPNAGSMTVPSPHPPL 75
Query: 63 EENRSSCKEMTRKGEDIE------GTCIQDSDSRSTINSPDRSTYSHDESS--------- 107
R + KG D E G Q+ S S ++SP S S + S
Sbjct: 76 PRRRLDVRS---KGGDPEEDREERGAARQELGS-SYLDSPVHSPSSDNSGSVGGMHRKHY 131
Query: 108 --GKDFSGSSSNSISTSCSGNDSEEEDDD--------GCLDDWEAVADA-LYANDKSHSV 156
G + SSS+S+ +S S + SE EDDD G LDDWEAVADA D HS
Sbjct: 132 NNGGGLNLSSSSSVWSS-SRSVSEAEDDDTGGPEEENGVLDDWEAVADADALTVDDCHSH 190
Query: 157 VSESPAEHEAECRYTVLEDDKNPRVDFSKADFKSEVPESKPNRRAWKPDDTLRPRCLPNL 216
S A ++ R D + +AW PDD RP+ LP++
Sbjct: 191 QSSGHVAPPAAPNVCTAPANQTGRQDPIQ------------RTKAWAPDDIFRPQSLPSI 238
Query: 217 SKQRNSP--LNSNWRGSRKTVPWAWQTIISQPSQCPICYEDLDVTDSSFLPCSCGFHLCL 274
S+Q + P + + W G+ A Q +S P CPIC EDLD+TDSSF PC C F LCL
Sbjct: 239 SRQVSFPASIGNGWMGA------AQQANLSTPLTCPICCEDLDLTDSSFCPCPCKFCLCL 292
Query: 275 FCHKKILEADARCPSCRKLY 294
FCH KILEAD RCP CRK Y
Sbjct: 293 FCHNKILEADGRCPGCRKEY 312
>emb|CAE76013.1| B1358B12.22 [Oryza sativa (japonica cultivar-group)]
gi|50924856|ref|XP_472773.1| B1358B12.22 [Oryza sativa
(japonica cultivar-group)]
Length = 341
Score = 155 bits (393), Expect = 1e-36
Identities = 125/332 (37%), Positives = 158/332 (46%), Gaps = 70/332 (21%)
Query: 12 SKKKRTN-GSAKLKQIKLDVRREQWLSRVKKGCN-------VDSNGRMDNCPSSKHTASE 63
+KKKR N SAKLKQ KLD RREQWLS+ + + +G+ +S T +E
Sbjct: 16 AKKKRGNRSSAKLKQCKLDARREQWLSQDCSNSDPPAFWIGIVKDGKEAKASTSP-TGTE 74
Query: 64 ENRSSCK-------------EMTRKGEDIE------GTCIQDSDSRSTINSPDRSTYSHD 104
N S ++ KG D E G Q+ S S ++SP S S +
Sbjct: 75 PNAGSMTVPSPHPPLPRRRLDVRSKGGDPEEDREERGAARQELGS-SYLDSPVHSPSSDN 133
Query: 105 ESS-----------GKDFSGSSSNSISTSCSGNDSEEEDDD--------GCLDDWEAVAD 145
S G + SSS+S+ +S S + SE EDDD G LDDWEAVAD
Sbjct: 134 SGSVGGMHRKHYNNGGGLNLSSSSSVWSS-SRSVSEAEDDDTGGPEEENGVLDDWEAVAD 192
Query: 146 A-LYANDKSHSVVSESPAEHEAECRYTVLEDDKNPRVDFSKADFKSEVPESKPNRRAWKP 204
A D HS S A ++ R D + +AW P
Sbjct: 193 ADALTVDDCHSHQSSGHVAPPAAPNVCTAPANQTGRQDPIQ------------RTKAWAP 240
Query: 205 DDTLRPRCLPNLSKQRNSP--LNSNWRGSRKTVPWAWQTIISQPSQCPICYEDLDVTDSS 262
DD RP+ LP++S+Q + P + + W G+ A Q +S P CPIC EDLD+TDSS
Sbjct: 241 DDIFRPQSLPSISRQVSFPASIGNGWMGA------AQQANLSTPLTCPICCEDLDLTDSS 294
Query: 263 FLPCSCGFHLCLFCHKKILEADARCPSCRKLY 294
F PC C F LCLFCH KILEAD RCP CRK Y
Sbjct: 295 FCPCPCKFCLCLFCHNKILEADGRCPGCRKEY 326
>gb|AAL86287.1| unknown protein [Arabidopsis thaliana]
Length = 222
Score = 155 bits (392), Expect = 2e-36
Identities = 90/204 (44%), Positives = 113/204 (55%), Gaps = 31/204 (15%)
Query: 110 DFSGSSSNSISTS---CSGNDSEEE----DDDGCLDDWEAVADALYANDKSHSVVSESPA 162
+FSG SS S S+S CSGN +EEE DDDGC+DDWEAVADAL A ++ P
Sbjct: 3 NFSGRSSRSSSSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIEK--KSRPL 60
Query: 163 EHEAE-----------CRYTVLEDDKNPRVDFSKADFKSEVPESKPNRRAWKPDDTLRPR 211
E E C ++ + V+ K + + + RAW+ DD LRP+
Sbjct: 61 ESVKEQVSVGQSASNVCDSSISDASDVVGVEDPKQECLRVSSRKQTSNRAWRLDDDLRPQ 120
Query: 212 CLPNLSKQRNSPLNSNWRGSRKTVPWAWQTIISQPSQCPICYEDLDVTDSSFLPCSCGFH 271
LPNL+KQ + P S ++ PS CPICYEDLD+TDS+FLPC CGF
Sbjct: 121 GLPNLAKQLSFPELDKRFSS-----------VAIPSSCPICYEDLDLTDSNFLPCPCGFR 169
Query: 272 LCLFCHKKILEADARCPSCRKLYD 295
LCLFCHK I + D RCP CRK Y+
Sbjct: 170 LCLFCHKTICDGDGRCPGCRKPYE 193
>gb|AAQ62440.1| At1g74870 [Arabidopsis thaliana] gi|15221416|ref|NP_177625.1|
expressed protein [Arabidopsis thaliana]
gi|5882736|gb|AAD55289.1| F25A4.16 [Arabidopsis
thaliana] gi|12323896|gb|AAG51922.1| hypothetical
protein; 76274-75092 [Arabidopsis thaliana]
gi|25406390|pir||C96778 hypothetical protein F9E10.28
[imported] - Arabidopsis thaliana
gi|51968504|dbj|BAD42944.1| hypothetical protein
[Arabidopsis thaliana]
Length = 289
Score = 108 bits (271), Expect = 2e-22
Identities = 90/289 (31%), Positives = 119/289 (41%), Gaps = 57/289 (19%)
Query: 12 SKKKRTNGSAKLKQIKLDVRREQWLSRVKKGCNVDSN--GRMDNCPSSKHTASEENRSSC 69
SKK++ N KLKQ K+D RR+QW+S+ KK NVD GR K T + R
Sbjct: 20 SKKRKANWFCKLKQWKIDARRKQWISQWKKA-NVDEEEIGRRLRSLLEKLTDQKAWRIDY 78
Query: 70 KEMTRKGEDIEGTCIQDSDSRSTINSPDRSTYSHDESSGKDFSGSSSNSISTSCSGNDSE 129
+ D+E T S +SP D SG F CS +E
Sbjct: 79 DDDEDDEIDLERTS-------SFASSPTSVLKRKDSVSGDCFC----------CSKQMTE 121
Query: 130 EEDD--DGCLDDWEAVADALYANDKSHSVVSESPAEHEAECRYTVLEDDKNPRVDFSKAD 187
EE++ D D+W+ DAL + E+D N D
Sbjct: 122 EEEEVFDDAYDNWDGFKDALNS-----------------------FENDNNESSRLVTED 158
Query: 188 FKSEVPESKPN--RRAWKPDDTLRPRCLPNLSKQRNSPLNSNWRGSRKTVPWAWQTIISQ 245
F+ E + P+ +R K P + + N SN R
Sbjct: 159 FEQEEEDLIPDTSQRMNKCKQEAAPGNQTTIHRNSNKKKRSNSEKQRG----------DG 208
Query: 246 PSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLY 294
+CPIC E +D TD F PC+CGF +CLFCH KI E +ARCP+CRK Y
Sbjct: 209 DEECPICSELMDATDLEFEPCTCGFRICLFCHNKISENEARCPACRKDY 257
>gb|AAW41598.1| transcriptional repressor, putative [Cryptococcus neoformans var.
neoformans JEC21] gi|50259942|gb|EAL22608.1|
hypothetical protein CNBB2400 [Cryptococcus neoformans
var. neoformans B-3501A] gi|58262990|ref|XP_568905.1|
transcriptional repressor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 873
Score = 68.9 bits (167), Expect = 2e-10
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLYD 295
C +C E LD++D +F PC CG +C FC+ K+L DARCP CR+ YD
Sbjct: 64 CLLCAEPLDLSDLNFKPCQCGLQICQFCYNKLLSTDARCPGCRRTYD 110
>gb|AAF66693.2| NOT4p [Candida albicans]
Length = 576
Score = 67.4 bits (163), Expect = 5e-10
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 5/60 (8%)
Query: 241 TIISQPSQ--CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
T IS + CP+C E++D++D +F PC CG+ +C FC+ I E + RCP CR+LYD
Sbjct: 7 TFISDDEEEYCPLCVEEMDISDKNFKPCPCGYQICQFCYNNIRQNPELNGRCPGCRRLYD 66
>emb|CAG89618.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50425277|ref|XP_461230.1| unnamed protein product
[Debaryomyces hansenii]
Length = 652
Score = 67.0 bits (162), Expect = 7e-10
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
CP+C E++D++D +F PC CG+ +C FC+ I E + RCP CR+LYD
Sbjct: 18 CPLCVEEMDISDKNFKPCPCGYQICQFCYNNIRQNPELNGRCPGCRRLYD 67
>ref|NP_010991.1| Component of the CCR4-NOT transcription regulatory complex, which
represses transcription, at least in part, by inhibiting
functional TBP-DNA interactions and also aids in
transcription elongation; interacts with C-terminal
region of Not1p; Mot2p [Saccharomyces cerevisiae]
gi|462738|sp|P34909|NOT4_YEAST General negative
regulator of transcription subunit 4
gi|401815|gb|AAC37413.1| zinc finger protein
gi|603304|gb|AAB64604.1| Mot2p [Saccharomyces
cerevisiae] gi|425482|gb|AAB00326.1| Mot2p
Length = 587
Score = 66.6 bits (161), Expect = 9e-10
Identities = 27/56 (48%), Positives = 37/56 (65%), Gaps = 5/56 (8%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYDHVDGNV 301
CP+C E +D+TD +F PC CG+ +C FC+ I E + RCP+CR+ YD D NV
Sbjct: 33 CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD--DENV 86
>gb|AAO51113.1| similar to Dictyostelium discoideum (Slime mold). MkpA protein
Length = 1348
Score = 66.6 bits (161), Expect = 9e-10
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 245 QPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADA-RCPSCRKLYDHVDGNV 301
+ + CP+C ++L D F PC CG+ +C+FC ++I E++ RCP+CRK YD V+ +V
Sbjct: 4 EDNSCPLCLDELSKADRKFRPCPCGYQICVFCFERIRESEQNRCPACRKTYDSVNFSV 61
>ref|XP_644313.1| hypothetical protein DDB0217593 [Dictyostelium discoideum]
gi|60472442|gb|EAL70395.1| hypothetical protein
DDB0217593 [Dictyostelium discoideum]
Length = 1486
Score = 66.6 bits (161), Expect = 9e-10
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 245 QPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADA-RCPSCRKLYDHVDGNV 301
+ + CP+C ++L D F PC CG+ +C+FC ++I E++ RCP+CRK YD V+ +V
Sbjct: 4 EDNSCPLCLDELSKADRKFRPCPCGYQICVFCFERIRESEQNRCPACRKTYDSVNFSV 61
>gb|AAS51856.1| ADL064Wp [Ashbya gossypii ATCC 10895] gi|45187809|ref|NP_984032.1|
ADL064Wp [Eremothecium gossypii]
Length = 646
Score = 66.2 bits (160), Expect = 1e-09
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
CP+C E LD+TD +F PC CG+ +C FC+ I E + RCP+CR+ YD
Sbjct: 33 CPLCMEPLDITDKNFKPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 82
>emb|CAG60788.1| unnamed protein product [Candida glabrata CBS138]
gi|50290813|ref|XP_447839.1| unnamed protein product
[Candida glabrata]
Length = 620
Score = 64.7 bits (156), Expect = 3e-09
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
CP+C E +D+TD +F PC CG+ +C FC+ I E + RCP+CR+ +D
Sbjct: 33 CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKFD 82
>emb|CAA91192.1| SPAC16C9.04c [Schizosaccharomyces pombe]
gi|19113990|ref|NP_593078.1| hypothetical protein
SPAC16C9.04c [Schizosaccharomyces pombe 972h-]
gi|1175493|sp|Q09818|YAC4_SCHPO Putative general
negative regulator of transcription C16C9.04c
Length = 489
Score = 63.5 bits (153), Expect = 8e-09
Identities = 23/47 (48%), Positives = 34/47 (71%), Gaps = 1/47 (2%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILE-ADARCPSCRKLY 294
CP+C E++D++D +F PC CG+ +C FC I E + RCP+CR+LY
Sbjct: 18 CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLY 64
>gb|EAL88733.1| CCR4-NOT core complex subunit Not4, putative [Aspergillus fumigatus
Af293]
Length = 1545
Score = 63.5 bits (153), Expect = 8e-09
Identities = 22/49 (44%), Positives = 34/49 (68%), Gaps = 2/49 (4%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL--EADARCPSCRKLYD 295
CP+C E+ D++D +F PC CG+ +C FC+ I + RCP+CR++YD
Sbjct: 18 CPLCIEEFDLSDKNFKPCPCGYQICQFCYNNIKTHSEEGRCPNCRRVYD 66
>emb|CAH01409.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
gi|50305199|ref|XP_452558.1| unnamed protein product
[Kluyveromyces lactis]
Length = 574
Score = 63.5 bits (153), Expect = 8e-09
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
CP+C E LDV D F PC CG+ +C FC+ I E + RCP+CR+ YD
Sbjct: 38 CPLCIEPLDVMDKHFKPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 87
>emb|CAD56154.1| CCr4/NOT complex/transcription factor subunit [Kluyveromyces
lactis]
Length = 574
Score = 63.5 bits (153), Expect = 8e-09
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
CP+C E LDV D F PC CG+ +C FC+ I E + RCP+CR+ YD
Sbjct: 38 CPLCIEPLDVMDKHFKPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 87
>emb|CAG77692.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50554963|ref|XP_504890.1| hypothetical protein
[Yarrowia lipolytica]
Length = 495
Score = 62.8 bits (151), Expect = 1e-08
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 249 CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKIL---EADARCPSCRKLYD 295
CP+C E++D++D +F PC CG+ +C FC+ I + + RCP CR+ YD
Sbjct: 17 CPLCVEEMDISDRNFKPCPCGYQICQFCYNNIRQNPQLNGRCPGCRRPYD 66
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.129 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 593,416,693
Number of Sequences: 2540612
Number of extensions: 25836341
Number of successful extensions: 90282
Number of sequences better than 10.0: 1270
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 1002
Number of HSP's that attempted gapping in prelim test: 83711
Number of HSP's gapped (non-prelim): 3916
length of query: 322
length of database: 863,360,394
effective HSP length: 128
effective length of query: 194
effective length of database: 538,162,058
effective search space: 104403439252
effective search space used: 104403439252
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0081b.3