BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0076a.11
(428 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM20503.1| clathrin adaptor medium chain protein MU1B, putat... 795 0.0
ref|NP_917119.1| putative clathrin-associated protein [Oryza sat... 775 0.0
gb|AAU43995.1| putative clathrin [Oryza sativa (japonica cultiva... 766 0.0
ref|NP_172543.1| clathrin adaptor complexes medium subunit famil... 760 0.0
gb|AAF17661.1| F20B24.16 [Arabidopsis thaliana] 700 0.0
dbj|BAD81792.1| clathrin-associated protein unc-101-like [Oryza ... 640 0.0
gb|EAA77340.1| conserved hypothetical protein [Gibberella zeae P... 554 e-156
emb|CAD70726.1| probable clathrin assembly protein AP47 [Neurosp... 552 e-156
gb|AAW44707.1| clathrin assembly protein AP47, putative [Cryptoc... 551 e-155
ref|XP_317947.2| ENSANGP00000020532 [Anopheles gambiae str. PEST... 550 e-155
gb|AAH61393.1| Hypothetical protein MGC75970 [Xenopus tropicalis... 548 e-154
gb|AAH76939.1| Adaptor-related protein complex 1, mu 1 subunit [... 547 e-154
ref|NP_001007887.1| similar to adaptor-related protein complex 1... 547 e-154
gb|AAH17469.1| Adaptor-related protein complex 1, mu 1 subunit [... 546 e-154
ref|XP_240364.3| PREDICTED: similar to AP47 protein - mouse [Rat... 546 e-154
gb|AAH70627.1| MGC81419 protein [Xenopus laevis] 546 e-154
gb|AAH97533.1| Unknown (protein for MGC:114659) [Xenopus laevis] 546 e-154
ref|XP_391939.2| PREDICTED: similar to ENSANGP00000020532 [Apis ... 546 e-154
pdb|1W63|V Chain V, Ap1 Clathrin Adaptor Core gi|55670644|pdb|1W... 546 e-154
gb|AAH03823.1| Adaptor-related protein complex AP-1, mu subunit ... 545 e-154
>gb|AAM20503.1| clathrin adaptor medium chain protein MU1B, putative [Arabidopsis
thaliana] gi|15219810|ref|NP_176277.1| clathrin adaptor
complexes medium subunit family protein [Arabidopsis
thaliana] gi|2462748|gb|AAB71967.1| putative Clathrin
Coat Assembly protein [Arabidopsis thaliana]
gi|25084014|gb|AAN72155.1| clathrin adaptor medium chain
protein MU1B, putative [Arabidopsis thaliana]
gi|25320049|pir||C96633 probable Serine/Threonine
protein kinase F8A5.29 [imported] - Arabidopsis thaliana
Length = 428
Score = 795 bits (2054), Expect = 0.0
Identities = 389/428 (90%), Positives = 414/428 (95%)
Query: 1 MAGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISY 60
MAGAASALFLLDIKGRVL+WRDYRGDV+A AERFFTKLIEK+ D+QS DPV +DNG++Y
Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYDNGVTY 60
Query: 61 MFVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEI 120
MFVQHSNVYLMIA+RQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE+
Sbjct: 61 MFVQHSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 121 MDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVES 180
MDFGYPQYTEA+ILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGI YKKNEVFLDV+E+
Sbjct: 121 MDFGYPQYTEARILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIQYKKNEVFLDVIEN 180
Query: 181 VNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIK 240
VNILVNSNGQI+RSDVVGALKMRTYL+GMPECKLGLNDRVLLEAQGR TKGKAIDLEDIK
Sbjct: 181 VNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRATKGKAIDLEDIK 240
Query: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKA 300
FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEA +E HS+SR+E+++KA
Sbjct: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQIESHSRSRVEMLIKA 300
Query: 301 RSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLR 360
RSQFKERSTATNVEIELPVP DA NP VRTS+GSA+YAPEKDAL+WKI+SFPG KEYMLR
Sbjct: 301 RSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPEKDALVWKIKSFPGNKEYMLR 360
Query: 361 AEFRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 420
AEF LPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA
Sbjct: 361 AEFHLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 420
Query: 421 GEYELRLI 428
GEYELRL+
Sbjct: 421 GEYELRLV 428
>ref|NP_917119.1| putative clathrin-associated protein [Oryza sativa (japonica
cultivar-group)]
Length = 429
Score = 775 bits (2001), Expect = 0.0
Identities = 378/429 (88%), Positives = 413/429 (96%), Gaps = 1/429 (0%)
Query: 1 MAGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDN-GIS 59
MAGA SALFLLDIKGRVL+WRDYRGDV+AL AERFFTKL++K+ D+++ PVV+D+ G++
Sbjct: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
Query: 60 YMFVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 119
YMF+QH+NV+L+ A+RQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE
Sbjct: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
Query: 120 IMDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVE 179
+MDFGYPQYTEAKILSEFIKTDAYRMEV+QRPPMAVTNAVSWRSEGI YKKNEVFLDVVE
Sbjct: 121 MMDFGYPQYTEAKILSEFIKTDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVE 180
Query: 180 SVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDI 239
SVNILVNSNGQI+RSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGR TKGKAIDL+DI
Sbjct: 181 SVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDLDDI 240
Query: 240 KFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVK 299
KFHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEA +EKHS+SRIE+MVK
Sbjct: 241 KFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQIEKHSRSRIELMVK 300
Query: 300 ARSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYML 359
ARSQFKERSTATNVEIE+PVP DA NPN+RTSMGSAAYAPE+DA++WK++SFPGGK+YM
Sbjct: 301 ARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKSFPGGKDYMC 360
Query: 360 RAEFRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM 419
RAEF LPSITAEEA PE+KAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM
Sbjct: 361 RAEFSLPSITAEEAAPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITM 420
Query: 420 AGEYELRLI 428
AGEYELRLI
Sbjct: 421 AGEYELRLI 429
>gb|AAU43995.1| putative clathrin [Oryza sativa (japonica cultivar-group)]
Length = 430
Score = 766 bits (1977), Expect = 0.0
Identities = 375/428 (87%), Positives = 408/428 (94%), Gaps = 1/428 (0%)
Query: 2 AGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDN-GISY 60
AGA SALFLLDIKGRVL+WRDYRGDV+AL AERFFTKL++K++DA+ PVVHD+ G+SY
Sbjct: 3 AGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSY 62
Query: 61 MFVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEI 120
MF+QH+NV+L+ A+RQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE+
Sbjct: 63 MFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 122
Query: 121 MDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVES 180
MDFGYPQYTEA ILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGI YKKNEVFLDVVES
Sbjct: 123 MDFGYPQYTEAMILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVES 182
Query: 181 VNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIK 240
VNILVNSNGQI+RSDV+G LKMRT+LSGMPECKLGLNDRVLLEAQGRTTKGKAIDL+DIK
Sbjct: 183 VNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLDDIK 242
Query: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKA 300
FHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEA VEKHS+SRI+I VK
Sbjct: 243 FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSRSRIQITVKT 302
Query: 301 RSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLR 360
RSQFKERSTATNVEIE+PVP D+ NPN+RTSMGSAAYAPE+DA++WKI+SFPGGKEYM R
Sbjct: 303 RSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKSFPGGKEYMCR 362
Query: 361 AEFRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 420
AEF LPSIT+E+ PE+KAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA
Sbjct: 363 AEFSLPSITSEDGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 422
Query: 421 GEYELRLI 428
GEYELRLI
Sbjct: 423 GEYELRLI 430
>ref|NP_172543.1| clathrin adaptor complexes medium subunit family protein
[Arabidopsis thaliana] gi|4874275|gb|AAD31340.1| Similar
to gb|L26291 clathrin-associated protein unc-101 from
Caenorhabditis elegans and is a member of the PF|00928
Adapter complexes medium subunit family. [Arabidopsis
thaliana] gi|25320047|pir||G86240 hypothetical protein
[imported] - Arabidopsis thaliana
Length = 428
Score = 760 bits (1962), Expect = 0.0
Identities = 372/428 (86%), Positives = 406/428 (93%)
Query: 1 MAGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISY 60
MAGAASALFLLDIKGRVL+WRDYRGDVTA AERFFTKLIE + D+QS DPV +DNG++Y
Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTY 60
Query: 61 MFVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEI 120
MFVQHSN+YLMIA+RQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE+
Sbjct: 61 MFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 121 MDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVES 180
MDFGYPQ+TEA+ILSEFIKTDAYRMEVTQRPPMAVTN+VSWRSEG+ +KKNEVFLDV+ES
Sbjct: 121 MDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIES 180
Query: 181 VNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIK 240
VNILVNSNGQI+RSDVVGALKMRTYLSGMPECKLGLNDR+LLEAQGR KGKAIDLEDIK
Sbjct: 181 VNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIK 240
Query: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKA 300
FHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEA +E+HS+SR+E++VKA
Sbjct: 241 FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKA 300
Query: 301 RSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLR 360
RSQFK+RS AT+VEIELPVP DA NP+VRTS+GSAAYAPEKDAL+WKI+ F G KE+ L+
Sbjct: 301 RSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLK 360
Query: 361 AEFRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 420
A+F LPSI AEEATPERKAPIRVKFEIP F VSGIQVRYLKIIEKSGYQA PWVRYITMA
Sbjct: 361 ADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMA 420
Query: 421 GEYELRLI 428
GEYELRL+
Sbjct: 421 GEYELRLM 428
>gb|AAF17661.1| F20B24.16 [Arabidopsis thaliana]
Length = 411
Score = 700 bits (1807), Expect = 0.0
Identities = 351/432 (81%), Positives = 385/432 (88%), Gaps = 25/432 (5%)
Query: 1 MAGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISY 60
MAGAASALFLLDIKGRVL+WRDYRGDVTA AERFFTKLIE + D+QS DPV +DNG++Y
Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTY 60
Query: 61 MFVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEI 120
MFVQHSN+YLMIA+RQNCNAASLLFFLHRVVD YELLDE+
Sbjct: 61 MFVQHSNIYLMIASRQNCNAASLLFFLHRVVD---------------------YELLDEM 99
Query: 121 MDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVES 180
MDFGYPQ+TEA+ILSEFIKTDAYRMEVTQRPPMAVTN+VSWRSEG+ +KKNEVFLDV+ES
Sbjct: 100 MDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIES 159
Query: 181 VNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIK 240
VNILVNSNGQI+RSDVVGALKMRTYLSGMPECKLGLNDR+LLEAQGR KGKAIDLEDIK
Sbjct: 160 VNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIK 219
Query: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQ----VKPLIWVEATVEKHSKSRIEI 296
FHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQ VKPLIWVEA +E+HS+SR+E+
Sbjct: 220 FHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVLECVKPLIWVEAHIERHSRSRVEM 279
Query: 297 MVKARSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKE 356
+VKARSQFK+RS AT+VEIELPVP DA NP+VRTS+GSAAYAPEKDAL+WKI+ F G KE
Sbjct: 280 LVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKE 339
Query: 357 YMLRAEFRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRY 416
+ L+A+F LPSI AEEATPERKAPIRVKFEIP F VSGIQVRYLKIIEKSGYQA PWVRY
Sbjct: 340 HTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRY 399
Query: 417 ITMAGEYELRLI 428
ITMAGEYELRL+
Sbjct: 400 ITMAGEYELRLM 411
>dbj|BAD81792.1| clathrin-associated protein unc-101-like [Oryza sativa (japonica
cultivar-group)] gi|56784185|dbj|BAD81570.1|
clathrin-associated protein unc-101-like [Oryza sativa
(japonica cultivar-group)]
Length = 357
Score = 640 bits (1651), Expect = 0.0
Identities = 310/356 (87%), Positives = 343/356 (96%), Gaps = 1/356 (0%)
Query: 1 MAGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDN-GIS 59
MAGA SALFLLDIKGRVL+WRDYRGDV+AL AERFFTKL++K+ D+++ PVV+D+ G++
Sbjct: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
Query: 60 YMFVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 119
YMF+QH+NV+L+ A+RQNCNAAS+L FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE
Sbjct: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
Query: 120 IMDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVE 179
+MDFGYPQYTEAKILSEFIKTDAYRMEV+QRPPMAVTNAVSWRSEGI YKKNEVFLDVVE
Sbjct: 121 MMDFGYPQYTEAKILSEFIKTDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVE 180
Query: 180 SVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDI 239
SVNILVNSNGQI+RSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGR TKGKAIDL+DI
Sbjct: 181 SVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRATKGKAIDLDDI 240
Query: 240 KFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVK 299
KFHQCVRLARFENDRTISFIPPDG+FDLMTYRLSTQVKPLIWVEA +EKHS+SRIE+MVK
Sbjct: 241 KFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQIEKHSRSRIELMVK 300
Query: 300 ARSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGK 355
ARSQFKERSTATNVEIE+PVP DA NPN+RTSMGSAAYAPE+DA++WK++SFPGGK
Sbjct: 301 ARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKSFPGGK 356
>gb|EAA77340.1| conserved hypothetical protein [Gibberella zeae PH-1]
gi|46130854|ref|XP_389158.1| conserved hypothetical
protein [Gibberella zeae PH-1]
Length = 430
Score = 554 bits (1427), Expect = e-156
Identities = 264/425 (62%), Positives = 343/425 (80%), Gaps = 2/425 (0%)
Query: 5 ASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFVQ 64
ASALF LD+KG+ L+ R+YRGD+ E+F L E + D+ + P GI+Y++++
Sbjct: 2 ASALFFLDLKGKTLLARNYRGDIPMSAVEKFPVLLSEAEEDSSAVPPCFSHEGINYLYIR 61
Query: 65 HSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDFG 124
H+N+YL+ T++N NAA +L FLH+VV+VF YF+ LEEES+RDNFV++YELLDE+MDFG
Sbjct: 62 HNNLYLLALTKRNTNAAEILLFLHKVVEVFTEYFKALEEESIRDNFVIIYELLDEMMDFG 121
Query: 125 YPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVNIL 184
YPQ TE+KIL E+I +++++E+ RPP+AVTNAVSWRSEGI Y+KNEVFLDVVES+N+L
Sbjct: 122 YPQTTESKILQEYITQESHKLEIQARPPIAVTNAVSWRSEGIRYRKNEVFLDVVESLNLL 181
Query: 185 VNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQC 244
V++NG ++RS+++GA+KM+ YLSGMPE +LGLND+V+ E GR T+GKAI++ED+KFHQC
Sbjct: 182 VSANGNVLRSEILGAIKMKCYLSGMPELRLGLNDKVMFETTGRATRGKAIEMEDVKFHQC 241
Query: 245 VRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARSQF 304
VRL+RFENDRTISFIPPDG F+LM+YRL+TQVKPLIWVE VE HS SRIE M+KAR+QF
Sbjct: 242 VRLSRFENDRTISFIPPDGEFELMSYRLNTQVKPLIWVECVVESHSGSRIEYMLKARAQF 301
Query: 305 KERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAEFR 364
K RSTA NVEI +PVP DA +P RT++GS YAPE+ A++WKI+ F GGKE+++RAE
Sbjct: 302 KRRSTANNVEIVVPVPDDADSPRFRTNIGSVHYAPEQSAIVWKIKQFGGGKEFLMRAELG 361
Query: 365 LPSITA-EEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIE-KSGYQALPWVRYITMAGE 422
LPS+ +E K PI+VKFEIPYFT SGIQVRYLKI E K Y +LPWVRYIT +G+
Sbjct: 362 LPSVRGDDEQGKGAKRPIQVKFEIPYFTTSGIQVRYLKITEPKLQYPSLPWVRYITQSGD 421
Query: 423 YELRL 427
+RL
Sbjct: 422 IAVRL 426
>emb|CAD70726.1| probable clathrin assembly protein AP47 [Neurospora crassa]
Length = 428
Score = 552 bits (1423), Expect = e-156
Identities = 261/424 (61%), Positives = 343/424 (80%), Gaps = 2/424 (0%)
Query: 5 ASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFVQ 64
ASA+F LD+KG+ L+ R+YRGD+ E+F L E + ++ + P GI+Y++++
Sbjct: 2 ASAIFFLDLKGKTLLARNYRGDIPMSAVEKFPILLSEAEEESSAVPPCFSHEGINYLYIR 61
Query: 65 HSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDFG 124
H+N+YL+ T++N NAA +L FLH++V+VF YF+ LEEES+RDNFV++YELLDE+MDFG
Sbjct: 62 HNNLYLLALTKRNTNAAEILLFLHKIVEVFTEYFKALEEESIRDNFVIIYELLDEMMDFG 121
Query: 125 YPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVNIL 184
YPQ TE+KIL E+I +++++E+ RPP+AVTNAVSWRSEGI Y+KNEVFLDV+ES+N+L
Sbjct: 122 YPQTTESKILQEYITQESHKLEIQARPPIAVTNAVSWRSEGIRYRKNEVFLDVIESLNLL 181
Query: 185 VNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQC 244
V++NG ++RS+++GA+KM+ YLSGMPE +LGLND+V+ E GRTT+GKAI++ED+KFHQC
Sbjct: 182 VSANGNVLRSEILGAIKMKCYLSGMPELRLGLNDKVMFETTGRTTRGKAIEMEDVKFHQC 241
Query: 245 VRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARSQF 304
VRL+RFENDRTISFIPPDG F+LM+YRL+TQVKPLIWVE VE HS SRIE M+KAR+QF
Sbjct: 242 VRLSRFENDRTISFIPPDGEFELMSYRLNTQVKPLIWVECVVESHSGSRIEYMLKARAQF 301
Query: 305 KERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAEFR 364
K RSTA NVEI +PVP DA P RT++GS YAPEK A++WKI+ F GGKE+++RAE
Sbjct: 302 KRRSTANNVEIIVPVPDDADTPRFRTNVGSVHYAPEKSAIVWKIKQFGGGKEFLMRAELG 361
Query: 365 LPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIE-KSGYQALPWVRYITMAGEY 423
LPS+ ++ K PI+VKFEIPYFT SGIQVRYLKI E K Y +LPWVRYIT +G+
Sbjct: 362 LPSVRGDD-EHGAKRPIQVKFEIPYFTTSGIQVRYLKITEPKLQYPSLPWVRYITQSGDI 420
Query: 424 ELRL 427
+RL
Sbjct: 421 AVRL 424
>gb|AAW44707.1| clathrin assembly protein AP47, putative [Cryptococcus neoformans
var. neoformans JEC21] gi|58269716|ref|XP_572014.1|
clathrin assembly protein AP47, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 435
Score = 551 bits (1419), Expect = e-155
Identities = 264/425 (62%), Positives = 338/425 (79%), Gaps = 3/425 (0%)
Query: 5 ASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFVQ 64
AS + +LD+KG+ LI R YR DV ERF ++E + D P D G++YM ++
Sbjct: 2 ASLVAILDVKGKSLIQRSYRDDVPTSYIERFLPLILEMEEDNVPVTPCFSDEGVNYMHIR 61
Query: 65 HSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDFG 124
H+N+YL+ +++N NA ++FFLHR+ V YF+ELEEES+RDNFV++YELLDE+MDFG
Sbjct: 62 HNNLYLLALSKKNSNAVEVIFFLHRLCSVLTEYFKELEEESIRDNFVIIYELLDEMMDFG 121
Query: 125 YPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVNIL 184
YPQ TE+KIL E+I +++++EV RPPMAVTNAVSWRSEGI Y+KNEVFLDVVESVN+L
Sbjct: 122 YPQTTESKILQEYITQESHKLEVQVRPPMAVTNAVSWRSEGIRYRKNEVFLDVVESVNLL 181
Query: 185 VNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQC 244
VN++G +IRS+++GA+KM+ YLSGMPE +LGLND+V+ E GR +GK+I++ED+KFHQC
Sbjct: 182 VNASGNVIRSEILGAVKMKCYLSGMPELRLGLNDKVMFETTGRAARGKSIEMEDVKFHQC 241
Query: 245 VRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARSQF 304
VRL+RFENDRTISFIPPDG F+LM+YRLST VKPL++VEA+VE H SR+E MVK + QF
Sbjct: 242 VRLSRFENDRTISFIPPDGEFELMSYRLSTPVKPLVFVEASVESHRGSRVEYMVKIKGQF 301
Query: 305 KERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAEFR 364
K RSTA NVEI +PVP DA +P R S+GS YAPEK A +WKI+ GG++Y++RA F
Sbjct: 302 KRRSTANNVEIYVPVPDDADSPKFRASVGSVVYAPEKSAFVWKIKQLAGGRDYLMRAHFG 361
Query: 365 LPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAG-EY 423
LPS+ EE +++API VKFEIPYFTVSGIQVRYLKI+EKSGY+ALPWVRYIT G +Y
Sbjct: 362 LPSVRNEEL--DKRAPISVKFEIPYFTVSGIQVRYLKIVEKSGYKALPWVRYITQNGDDY 419
Query: 424 ELRLI 428
LR I
Sbjct: 420 VLRTI 424
>ref|XP_317947.2| ENSANGP00000020532 [Anopheles gambiae str. PEST]
gi|55237127|gb|EAA13067.2| ENSANGP00000020532 [Anopheles
gambiae str. PEST]
Length = 422
Score = 550 bits (1416), Expect = e-155
Identities = 262/423 (61%), Positives = 343/423 (80%), Gaps = 4/423 (0%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
++SA+F+LD KG+VLI R+YRG + ++F L+EK+ + P++ ++ +V
Sbjct: 2 SSSAIFILDAKGKVLISRNYRGHIDMGVIDKFMPLLMEKEEEGLIT-PILQTPECTFAYV 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+ +N+YL+ TR N N A + FLH+VV VF YF+ELEEES+RDNFVV+YELLDE++DF
Sbjct: 61 KTNNLYLVSVTRSNANIALVFVFLHKVVQVFTEYFKELEEESIRDNFVVIYELLDELIDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVNI 183
GYPQ T++KIL E+I + +++E+ R PMAVTNAVSWRSEGI Y+KNEVFLDV+ESVN+
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLEIQPRIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNL 180
Query: 184 LVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQ 243
L N+NG ++RS++VGA+KMR YLSGMPE +LGLND+VL E+ GR K K+++LED+KFHQ
Sbjct: 181 LANANGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGR-GKSKSVELEDVKFHQ 239
Query: 244 CVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARSQ 303
CVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +E+H+ SR+E M+KA+SQ
Sbjct: 240 CVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQ 299
Query: 304 FKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAEF 363
FK RSTA NVEI +PVP DA +P +T++GS YAPE++A+ W I+SFPGGKEY++RA F
Sbjct: 300 FKRRSTANNVEIVIPVPADADSPKFKTTIGSVKYAPEQNAITWTIKSFPGGKEYLMRAHF 359
Query: 364 RLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEY 423
LPS+ E++ E K PI+VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+Y
Sbjct: 360 GLPSVECEDS--EGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDY 417
Query: 424 ELR 426
+LR
Sbjct: 418 QLR 420
>gb|AAH61393.1| Hypothetical protein MGC75970 [Xenopus tropicalis]
gi|45360719|ref|NP_989033.1| hypothetical protein
LOC394630 [Xenopus tropicalis]
Length = 423
Score = 548 bits (1412), Expect = e-154
Identities = 260/424 (61%), Positives = 343/424 (80%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + + P++ G+ +M++
Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEG-ALSPILAHGGVRFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
GYPQ T++KIL E+I + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+ESVN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL E GR K K+++LED+KFH
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFENTGRG-KSKSVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SRIE M+KA+S
Sbjct: 240 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKS 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK RSTA NVEI +PVP DA +P +T++GS + PE ++W I+SFPGGKEY++RA
Sbjct: 300 QFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+
Sbjct: 360 FGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>gb|AAH76939.1| Adaptor-related protein complex 1, mu 1 subunit [Xenopus
tropicalis] gi|55741918|ref|NP_001006851.1|
adaptor-related protein complex 1, mu 1 subunit [Xenopus
tropicalis]
Length = 423
Score = 547 bits (1410), Expect = e-154
Identities = 262/424 (61%), Positives = 346/424 (80%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+ LI R+Y+GD+ L+ + F L++K+ ++ + P++ + +M++
Sbjct: 2 SASAVYILDLKGKPLICRNYKGDIDMLEIDHFMPLLVQKEEES-NLTPLLTHGKVHFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+HSN+YL+ T +N NA+ + FL+++++VF YF+ELEEES+RDNFV+VYELLDEIMDF
Sbjct: 61 KHSNLYLVALTNKNANASLVYSFLYKLIEVFTEYFKELEEESIRDNFVIVYELLDEIMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEVTQ-RPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
G+PQ TE+KIL E+I +++ + R P VTNAVSWRSEGI YKKNEVF+DV+ESVN
Sbjct: 121 GFPQTTESKILQEYITQQGNKLDTGKSRVPTTVTNAVSWRSEGIKYKKNEVFIDVIESVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
ILVNSNG ++RS++VG++K++ +LSGMPE +LGLNDRVL E GR K K ++LED+KFH
Sbjct: 181 ILVNSNGSVLRSEIVGSVKLKVFLSGMPELRLGLNDRVLFELTGRN-KNKTVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+TQVKPLIW+E+ +EK S SR+EIMVKA+
Sbjct: 240 QCVRLSRFENDRTISFIPPDGDFELMSYRLNTQVKPLIWIESVIEKFSHSRLEIMVKAKG 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK++S A NVEI +PVP DA +P +TS+GSA Y PEK+ +IW I+SFPGGKEY++RA
Sbjct: 300 QFKKQSVANNVEISVPVPSDADSPKFKTSVGSAKYVPEKNVVIWTIKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ EE E K PI VKFEIPYFTVSGIQVRY+KIIEKSGYQALPWVRYIT +G+
Sbjct: 360 FGLPSVETEEL--EGKPPISVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>ref|NP_001007887.1| similar to adaptor-related protein complex 1, mu 1 subunit;
clathrin assembly protein complex 1, medium chain;
clathrin coat assembly protein AP47; golgi adaptor AP-1
47 kDa protein; HA1 47 kDa subunit; clathrin assembly
protein complex AP1, mu sub... [Gallus gallus]
gi|53127386|emb|CAG31076.1| hypothetical protein [Gallus
gallus]
Length = 423
Score = 547 bits (1409), Expect = e-154
Identities = 259/424 (61%), Positives = 343/424 (80%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + + P++ G+ +M++
Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEG-TLSPILAHGGVRFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
GYPQ T++KIL E+I + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+ESVN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL + GR K K+++LED+KFH
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG-KSKSVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SRIE M+KA+S
Sbjct: 240 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKS 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK RSTA NVEI +PVP DA +P +T++GS + PE ++W I+SFPGGKEY++RA
Sbjct: 300 QFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+
Sbjct: 360 FGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>gb|AAH17469.1| Adaptor-related protein complex 1, mu 1 subunit [Homo sapiens]
gi|13491974|gb|AAK28024.1| clathrin-associated protein
AP47 [Homo sapiens] gi|18202738|sp|Q9BXS5|AP1M1_HUMAN
Adaptor-related protein complex 1, mu 1 subunit
(Mu-adaptin 1) (Adaptor protein complex AP-1 mu-1
subunit) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit)
(Clathrin assembly protein assembly protein complex 1
medium chain 1) (Clathrin coat assembly protein AP47)
(Clathrin coat associated protein AP47) (AP-mu chain
family member mu1A) gi|14210504|ref|NP_115882.1|
adaptor-related protein complex 1, mu 1 subunit [Homo
sapiens]
Length = 423
Score = 546 bits (1408), Expect = e-154
Identities = 259/424 (61%), Positives = 342/424 (80%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + P++ G+ +M++
Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
GYPQ T++KIL E+I + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+ESVN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL + GR K K+++LED+KFH
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG-KSKSVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SRIE M+KA+S
Sbjct: 240 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKS 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK RSTA NVEI +PVP DA +P +T++GS + PE ++W I+SFPGGKEY++RA
Sbjct: 300 QFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+
Sbjct: 360 FGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>ref|XP_240364.3| PREDICTED: similar to AP47 protein - mouse [Rattus norvegicus]
Length = 531
Score = 546 bits (1407), Expect = e-154
Identities = 260/426 (61%), Positives = 343/426 (80%), Gaps = 5/426 (1%)
Query: 2 AGAASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYM 61
A +ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + P++ G+ +M
Sbjct: 108 AMSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFM 166
Query: 62 FVQHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIM 121
+++H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+M
Sbjct: 167 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELM 226
Query: 122 DFGYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVES 180
DFGYPQ T++KIL E+I + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+E+
Sbjct: 227 DFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIEA 286
Query: 181 VNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIK 240
VN+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL + GR K K+++LED+K
Sbjct: 287 VNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG-KSKSVELEDVK 345
Query: 241 FHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKA 300
FHQCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SRIE MVKA
Sbjct: 346 FHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKA 405
Query: 301 RSQFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLR 360
+SQFK RSTA NVEI +PVP DA +P +T++GS + PE ++W I+SFPGGKEY++R
Sbjct: 406 KSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMR 465
Query: 361 AEFRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMA 420
A F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT
Sbjct: 466 AHFGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQN 523
Query: 421 GEYELR 426
G+Y+LR
Sbjct: 524 GDYQLR 529
>gb|AAH70627.1| MGC81419 protein [Xenopus laevis]
Length = 423
Score = 546 bits (1407), Expect = e-154
Identities = 262/424 (61%), Positives = 345/424 (80%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+F+LD+KG+ LI R+Y+GD+ L+ + F L++K+ + + P++ + +M++
Sbjct: 2 SASAVFILDLKGKPLISRNYKGDINMLEIDHFMPLLVQKEEEG-NLTPLLTHGKVHFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+HSN+YL+ T +N NA+ + FL++VV+VF YF+ELEEES+RDNFV+VYELLDEIMDF
Sbjct: 61 KHSNLYLVALTNKNANASLVYSFLYKVVEVFSEYFKELEEESIRDNFVIVYELLDEIMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEVTQ-RPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
G+PQ TE+KIL E+I +++ + R P VTNAVSWRSEGI +KKNEVF+DV+ESVN
Sbjct: 121 GFPQTTESKILQEYITQQGNKLDTGKSRVPTTVTNAVSWRSEGIKHKKNEVFIDVIESVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
ILVNSNG ++RS++VG++K++ +L+GMPE +LGLNDRVL E GR K K ++LED+KFH
Sbjct: 181 ILVNSNGSVLRSEIVGSVKLKVFLTGMPELRLGLNDRVLFELSGRN-KNKTVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+TQVKPLIW+E+ +EK S SR+EIMVKA+
Sbjct: 240 QCVRLSRFENDRTISFIPPDGDFELMSYRLNTQVKPLIWIESVIEKFSHSRLEIMVKAKG 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK++S A NVEI +PVP DA +P +TS+GSA Y PEK+ ++W I+SFPGGKEY++RA
Sbjct: 300 QFKKQSVANNVEIYVPVPSDADSPKFKTSVGSAKYVPEKNVVVWTIKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ EE E K PI VKFEIPYFTVSGIQVRY+KIIEKSGYQALPWVRYIT +G+
Sbjct: 360 FGLPSVEREEV--EGKPPISVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>gb|AAH97533.1| Unknown (protein for MGC:114659) [Xenopus laevis]
Length = 423
Score = 546 bits (1407), Expect = e-154
Identities = 258/424 (60%), Positives = 343/424 (80%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + + P++ G+ +M++
Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEG-ALSPILAHGGVRFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
GYPQ T++KIL E+I + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+ESVN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL + GR K K+++LED+KFH
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG-KSKSVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SR+E M+KA+S
Sbjct: 240 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRVEYMIKAKS 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK RSTA NVEI +PVP DA +P +T++GS + PE ++W I+SFPGGKEY++RA
Sbjct: 300 QFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWIPENSEIVWSIKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+
Sbjct: 360 FGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>ref|XP_391939.2| PREDICTED: similar to ENSANGP00000020532 [Apis mellifera]
Length = 422
Score = 546 bits (1407), Expect = e-154
Identities = 255/423 (60%), Positives = 344/423 (81%), Gaps = 4/423 (0%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ SA+++LD+KG+VLI R+YRGD+ E+F ++E++ + + P++ +Y ++
Sbjct: 2 STSAIYILDVKGKVLISRNYRGDIETGVIEKFMPLVMEREEEG-NLTPIIQTAECTYAYI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+++N+Y++ T++N N + + FLH++V V + YF+ELEEES+RDNFVV+YELLDE++DF
Sbjct: 61 KYNNLYIVSTTKKNANISLVFVFLHKLVQVMQEYFKELEEESIRDNFVVIYELLDELIDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVNI 183
GYPQ T++KIL E+I + +++E+ R PMAVTNAVSWRSEGI Y+KNEVFLDV+ESVN+
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLEIQPRIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNL 180
Query: 184 LVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQ 243
L N+NG ++ S++VGA+KMR YLSGMPE +LGLND+VL E+ GR K K+++LED+KFHQ
Sbjct: 181 LANANGNVLSSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGR-GKSKSVELEDVKFHQ 239
Query: 244 CVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARSQ 303
CVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +E+H+ SR+E M+KARSQ
Sbjct: 240 CVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKARSQ 299
Query: 304 FKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAEF 363
FK RSTA NVEI +PVP DA +P +T++GS Y+PE+ A+ W I+SFPGGKEY++RA F
Sbjct: 300 FKRRSTANNVEIVIPVPNDADSPKFKTTIGSVKYSPEQSAITWFIKSFPGGKEYLMRAHF 359
Query: 364 RLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEY 423
LPS+ E+ E K PI+VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+Y
Sbjct: 360 GLPSVVGEDV--EGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDY 417
Query: 424 ELR 426
+LR
Sbjct: 418 QLR 420
>pdb|1W63|V Chain V, Ap1 Clathrin Adaptor Core gi|55670644|pdb|1W63|R Chain R,
Ap1 Clathrin Adaptor Core gi|55670642|pdb|1W63|P Chain
P, Ap1 Clathrin Adaptor Core gi|55670641|pdb|1W63|O
Chain O, Ap1 Clathrin Adaptor Core
gi|55670640|pdb|1W63|N Chain N, Ap1 Clathrin Adaptor
Core gi|55670639|pdb|1W63|M Chain M, Ap1 Clathrin
Adaptor Core
Length = 423
Score = 546 bits (1406), Expect = e-154
Identities = 258/424 (60%), Positives = 342/424 (79%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + P++ G+ +M++
Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
GYPQ T++KIL EFI + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+E+VN
Sbjct: 121 GYPQTTDSKILQEFITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIEAVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL + GR K K+++LED+KFH
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG-KSKSVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SRIE MVKA+S
Sbjct: 240 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKAKS 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK RSTA NVEI +PVP DA +P +T++GS + PE ++W ++SFPGGKEY++RA
Sbjct: 300 QFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQA+PWVRYIT G+
Sbjct: 360 FGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQAIPWVRYITQNGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
>gb|AAH03823.1| Adaptor-related protein complex AP-1, mu subunit 1 [Mus musculus]
gi|7406853|gb|AAF61814.1| clathrin-associated adaptor
medium chain mu 1A [Mus musculus]
gi|543817|sp|P35585|AP1M1_MOUSE Adaptor-related protein
complex 1, mu 1 subunit (Mu-adaptin 1) (Adaptor protein
complex AP-1 mu-1 subunit) (Golgi adaptor HA1/AP1
adaptin mu-1 subunit) (Clathrin assembly protein
assembly protein complex 1 medium chain 1) (Clathrin
coat assembly protein AP47) (Clathrin coat associated
protein AP47) (AP-mu chain family member mu1A)
gi|6671557|ref|NP_031482.1| adaptor-related protein
complex AP-1, mu subunit 1 [Mus musculus]
gi|191986|gb|AAA37244.1| clathrin-associated protein
Length = 423
Score = 545 bits (1405), Expect = e-154
Identities = 258/424 (60%), Positives = 342/424 (79%), Gaps = 5/424 (1%)
Query: 4 AASALFLLDIKGRVLIWRDYRGDVTALDAERFFTKLIEKQADAQSQDPVVHDNGISYMFV 63
+ASA+++LD+KG+VLI R+YRGDV + E F L+EK+ + P++ G+ +M++
Sbjct: 2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLS-PILAHGGVRFMWI 60
Query: 64 QHSNVYLMIATRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEIMDF 123
+H+N+YL+ +++N + + FL++VV VF YF+ELEEES+RDNFV++YELLDE+MDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 124 GYPQYTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVN 182
GYPQ T++KIL E+I + +++E RPP VTNAVSWRSEGI Y+KNEVFLDV+E+VN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIEAVN 180
Query: 183 ILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFH 242
+LV++NG ++RS++VG++KMR +LSGMPE +LGLND+VL + GR K K+++LED+KFH
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG-KSKSVELEDVKFH 239
Query: 243 QCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEATVEKHSKSRIEIMVKARS 302
QCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+ +EKHS SRIE MVKA+S
Sbjct: 240 QCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKAKS 299
Query: 303 QFKERSTATNVEIELPVPVDAMNPNVRTSMGSAAYAPEKDALIWKIRSFPGGKEYMLRAE 362
QFK RSTA NVEI +PVP DA +P +T++GS + PE ++W ++SFPGGKEY++RA
Sbjct: 300 QFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKEYLMRAH 359
Query: 363 FRLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGE 422
F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+
Sbjct: 360 FGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGD 417
Query: 423 YELR 426
Y+LR
Sbjct: 418 YQLR 421
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.137 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 685,286,833
Number of Sequences: 2540612
Number of extensions: 27295182
Number of successful extensions: 61798
Number of sequences better than 10.0: 463
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 60353
Number of HSP's gapped (non-prelim): 571
length of query: 428
length of database: 863,360,394
effective HSP length: 131
effective length of query: 297
effective length of database: 530,540,222
effective search space: 157570445934
effective search space used: 157570445934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0076a.11