BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0074.13
         (50 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA97245.1| unnamed protein product [Arabidopsis thaliana] g...    62  5e-09
ref|XP_466281.1| putative pRGR1 [Oryza sativa (japonica cultivar...    35  0.71
sp|Q7RXY2|KYNU_NEUCR Putative kynureninase (L-kynurenine hydrola...    31  7.8

>dbj|BAA97245.1| unnamed protein product [Arabidopsis thaliana]
          gi|26450165|dbj|BAC42201.1| unknown protein
          [Arabidopsis thaliana] gi|28827714|gb|AAO50701.1|
          unknown protein [Arabidopsis thaliana]
          gi|15237787|ref|NP_197746.1| expressed protein
          [Arabidopsis thaliana]
          Length = 175

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 28/50 (56%), Positives = 41/50 (82%), Gaps = 3/50 (6%)

Query: 1  MEKMSKAFEKVKIMVGMEVEDEEQQAAALDNDNSFAFMDEFNRNCTLSTK 50
          M+KM++A EK+K++VGMEVEDE+Q   A D ++S +FM++ NRNC L+TK
Sbjct: 1  MDKMNQAIEKMKMLVGMEVEDEQQ---AADEESSLSFMEDLNRNCALTTK 47


>ref|XP_466281.1| putative pRGR1 [Oryza sativa (japonica cultivar-group)]
          gi|46390354|dbj|BAD15819.1| putative pRGR1 [Oryza
          sativa (japonica cultivar-group)]
          Length = 171

 Score = 34.7 bits (78), Expect = 0.71
 Identities = 17/49 (34%), Positives = 27/49 (54%), Gaps = 7/49 (14%)

Query: 1  MEKMSKAFEKVKIMVGMEVEDEEQQAAALDNDNSFAFMDEFNRNCTLST 49
          M+ M  A E+ +++VGMEV++E             +F D+  RNC L+T
Sbjct: 1  MDTMRGALERARMLVGMEVDEESA-------PEEQSFFDDVTRNCALTT 42


>sp|Q7RXY2|KYNU_NEUCR Putative kynureninase (L-kynurenine hydrolase)
          gi|32403872|ref|XP_322549.1| hypothetical protein
          [Neurospora crassa] gi|28917859|gb|EAA27546.1|
          hypothetical protein [Neurospora crassa]
          Length = 468

 Score = 31.2 bits (69), Expect = 7.8
 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)

Query: 19 VEDEEQQAAALDNDNSFAFM-DEFN 42
          V+D  +QA ALDN++S AF+ DEFN
Sbjct: 6  VQDARKQAEALDNEDSIAFVRDEFN 30


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.313    0.125    0.327 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,104,536
Number of Sequences: 2540612
Number of extensions: 1944184
Number of successful extensions: 3644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3641
Number of HSP's gapped (non-prelim): 3
length of query: 50
length of database: 863,360,394
effective HSP length: 26
effective length of query: 24
effective length of database: 797,304,482
effective search space: 19135307568
effective search space used: 19135307568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)