BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0073.3
(191 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD03501.1| 40S ribosome protein S7 [Avicennia marina] gi|385... 326 2e-88
gb|AAW50993.1| ribosomal protein S7 [Triticum aestivum] 323 2e-87
gb|AAN04468.1| ribosomal protein S7 [Oryza sativa (japonica cult... 316 2e-85
gb|AAD26256.1| ribosomal protein S7 [Secale cereale] gi|49036478... 315 6e-85
gb|AAV43811.1| putative 40S ribosomal protein S7 [Oryza sativa (... 314 9e-85
gb|AAM63913.1| 40S ribosomal protein S7 homolog, putative [Arabi... 312 4e-84
emb|CAC44242.1| Ribosomal protein S7 [Hordeum vulgare subsp. vul... 310 1e-83
gb|AAF32463.1| putative 40S ribosomal protein [Arabidopsis thali... 309 2e-83
gb|AAD44761.1| 40S ribosomal protein S7 homolog [Brassica olerac... 308 5e-83
gb|AAM64364.1| 40S ribosomal protein S7-like [Arabidopsis thaliana] 305 3e-82
emb|CAC01854.1| 40S ribosomal protein S7-like [Arabidopsis thali... 305 6e-82
ref|XP_419936.1| PREDICTED: similar to ribosomal protein S7 [Gal... 202 4e-51
gb|AAK95189.1| 40S ribosomal protein S7 [Ictalurus punctatus] gi... 202 5e-51
gb|AAN77896.1| ribosomal protein S7 [Petromyzon marinus] 202 5e-51
ref|NP_001009832.1| ribosomal protein S7 [Felis catus] gi|675537... 199 3e-50
ref|XP_213053.2| PREDICTED: ribosomal protein S7 [Rattus norvegi... 199 3e-50
gb|AAX29111.1| ribosomal protein S7 [synthetic construct] 199 3e-50
ref|XP_581800.1| PREDICTED: similar to 40S ribosomal protein S7 ... 199 3e-50
emb|CAH68965.1| ribosomal protein S7 [Danio rerio] gi|37748273|g... 199 3e-50
emb|CAA64412.1| ribosomal protein S7 [Takifugu rubripes] gi|1710... 198 6e-50
>gb|AAD03501.1| 40S ribosome protein S7 [Avicennia marina]
gi|3851636|gb|AAC97947.1| unknown [Avicennia marina]
gi|20139964|sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7
Length = 190
Score = 326 bits (836), Expect = 2e-88
Identities = 159/190 (83%), Positives = 179/190 (93%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MYT+ +KIHKDKDAEPTEFEE V QALFD ENT+QE+KSDLKDLYINSA+Q+DVSG +KA
Sbjct: 1 MYTALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVIHVPYRLRK+FRK+H +LVRELEKKFSGK+V+LIATRRILRPPKKGSA QRPR+RTLT
Sbjct: 61 VVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
AVH+AMLED+V PAEIVGKRVRYR+DGSKIMKVFLDPK +N+TE KLETFA VYRKLSGK
Sbjct: 121 AVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGK 180
Query: 181 DVVFEYPITE 190
DVVFE+P+TE
Sbjct: 181 DVVFEFPLTE 190
>gb|AAW50993.1| ribosomal protein S7 [Triticum aestivum]
Length = 192
Score = 323 bits (827), Expect = 2e-87
Identities = 154/190 (81%), Positives = 177/190 (93%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MYT+RKKI KDK EP+EFE+TV QA FDLEN +QELKSDLKDLYIN+A+Q+DV GNRKA
Sbjct: 1 MYTARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVIHVPYRLRK FRK+HV+LVRELEKKFSGKDV+ +ATRRI+RPPKKGSA QRPRTRTLT
Sbjct: 61 VVIHVPYRLRKPFRKIHVRLVRELEKKFSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
AVH+ +LEDVV PAEIVGKRVRYR+DG+K++K++LDPKERNNTEYKLETF+AVYR+L GK
Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 181 DVVFEYPITE 190
DVVFEYP+TE
Sbjct: 181 DVVFEYPVTE 190
>gb|AAN04468.1| ribosomal protein S7 [Oryza sativa (japonica cultivar-group)]
gi|49036471|sp|Q8LJU5|RS7_ORYSA 40S ribosomal protein S7
Length = 192
Score = 316 bits (810), Expect = 2e-85
Identities = 151/190 (79%), Positives = 175/190 (91%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MYT+R+KI KDK EPTEFE+TV QA FDLEN +QELKSDLKDLYIN AVQ+D+ GNRKA
Sbjct: 1 MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
V+IHVPYRLRKA++K+HV+LVRELEKKFSGKDV+L+ATRRI+RPPKKGSA RPRTRTLT
Sbjct: 61 VIIHVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
AVH+ +LEDVV PAEIVGKRVRY +DG KIMK+FLDPKERNNTEYKL+TF++VYR+L GK
Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGK 180
Query: 181 DVVFEYPITE 190
DVVF+YP+TE
Sbjct: 181 DVVFDYPMTE 190
>gb|AAD26256.1| ribosomal protein S7 [Secale cereale]
gi|49036478|sp|Q9XET4|RS7_SECCE 40S ribosomal protein S7
Length = 192
Score = 315 bits (806), Expect = 6e-85
Identities = 151/190 (79%), Positives = 174/190 (91%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MYT+RKKI KDK EP+EFE+TV QA FDLEN +QELKSD+KDLYIN+A Q+DV+GNRKA
Sbjct: 1 MYTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVIHVPYRLRK FRK+HV+LVRELEKKFSGKDV+++ATRRI+RPPKKGSA RPRTRTLT
Sbjct: 61 VVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
AVH+ +LEDVV PAEIVGKRVRYR+DGSKI+K+FLDP ERNNTEYKL+TF AVYR+L GK
Sbjct: 121 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGK 180
Query: 181 DVVFEYPITE 190
DVV+EYP+ E
Sbjct: 181 DVVYEYPVAE 190
>gb|AAV43811.1| putative 40S ribosomal protein S7 [Oryza sativa (japonica
cultivar-group)] gi|55167937|gb|AAV43806.1| putative 40S
ribosomal protein S7 [Oryza sativa (japonica
cultivar-group)]
Length = 192
Score = 314 bits (804), Expect = 9e-85
Identities = 150/190 (78%), Positives = 175/190 (91%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MYT+R+KI KDK EPTEFE+TV QA FDLEN +QELKSDLKDLYIN AVQ+D+ GNRKA
Sbjct: 1 MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
V+I+VPYRLRKA++K+HV+LVRELEKKFSGKDV+L+ATRRI+RPPKKGSA RPRTRTLT
Sbjct: 61 VIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
AVH+ +LEDVV PAEIVGKRVRY +DG KIMK+FLDPKERNNTEYKL+TF++VYR+L GK
Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGK 180
Query: 181 DVVFEYPITE 190
DVVF+YP+TE
Sbjct: 181 DVVFDYPMTE 190
>gb|AAM63913.1| 40S ribosomal protein S7 homolog, putative [Arabidopsis thaliana]
gi|18252255|gb|AAL62008.1| At1g48830/T24P22_5
[Arabidopsis thaliana] gi|15221972|ref|NP_175314.1| 40S
ribosomal protein S7 (RPS7A) [Arabidopsis thaliana]
gi|30694420|ref|NP_849786.1| 40S ribosomal protein S7
(RPS7A) [Arabidopsis thaliana]
gi|15724216|gb|AAL06501.1| At1g48830/T24P22_5
[Arabidopsis thaliana] gi|12597817|gb|AAG60128.1| 40S
ribosomal protein S7 homolog, putative [Arabidopsis
thaliana] gi|12321110|gb|AAG50658.1| 40S ribosomal
protein S7 homolog, putative [Arabidopsis thaliana]
gi|25294579|pir||A96526 probable 40S ribosomal protein
S7 homolog, [imported] - Arabidopsis thaliana
Length = 191
Score = 312 bits (799), Expect = 4e-84
Identities = 150/191 (78%), Positives = 179/191 (93%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++++ KIHK+K E +E +E V QA FDLENT+QELKS+LKDLY+NSAVQVD+SG RKA
Sbjct: 1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
+V++VPYRLRKA+RK+HV+LVRELEKKFSGKDVILIATRRI+RPPKKGSAA+RPR RTLT
Sbjct: 61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
+VHEA+L+DVVLPAEIVGKR RYR+DG+KIMKVFLDPKERNNTEYK+E F+AVY+KL+GK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180
Query: 181 DVVFEYPITEA 191
DVVFE+PITEA
Sbjct: 181 DVVFEFPITEA 191
>emb|CAC44242.1| Ribosomal protein S7 [Hordeum vulgare subsp. vulgare]
gi|49036474|sp|Q949H0|RS7_HORVU 40S ribosomal protein S7
Length = 191
Score = 310 bits (795), Expect = 1e-83
Identities = 150/190 (78%), Positives = 174/190 (90%), Gaps = 1/190 (0%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MYT+RKKI KDK EP+EFE+TV QA FDLEN +QELKSDLKDLYIN+A+Q+DV GNRKA
Sbjct: 1 MYTARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVIHVPYRLRK FRK+HV+LVRELE+ SGKDV+ +ATRRI+RPPKKGSA QRPRTRTLT
Sbjct: 61 VVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLT 119
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
AVH+ +LEDVV PAEIVGKRVRYR+DG+K++K++LDPKERNNTEYKLETF+AVYR+L GK
Sbjct: 120 AVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGK 179
Query: 181 DVVFEYPITE 190
DVVFEYP+ E
Sbjct: 180 DVVFEYPVAE 189
>gb|AAF32463.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|21592613|gb|AAM64562.1| putative 40S ribosomal
protein [Arabidopsis thaliana]
gi|18252253|gb|AAL62007.1| AT3g02560/F16B3_19
[Arabidopsis thaliana] gi|17065194|gb|AAL32751.1|
putative 40S ribosomal protein [Arabidopsis thaliana]
gi|16226502|gb|AAL16184.1| AT3g02560/F16B3_19
[Arabidopsis thaliana] gi|15724212|gb|AAL06499.1|
AT3g02560/F16B3_19 [Arabidopsis thaliana]
gi|30678607|ref|NP_850504.1| 40S ribosomal protein S7
(RPS7B) [Arabidopsis thaliana]
gi|15232926|ref|NP_186905.1| 40S ribosomal protein S7
(RPS7B) [Arabidopsis thaliana]
gi|24899797|gb|AAN65113.1| putative 40S ribosomal
protein [Arabidopsis thaliana]
Length = 191
Score = 309 bits (792), Expect = 2e-83
Identities = 151/191 (79%), Positives = 171/191 (89%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MY+ + KIHKDK PTEFEE V QALFDLENT+QELKS+LKDLYIN AVQ+D+SGNRKA
Sbjct: 1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVI+VP+RLRKAFRK+H++LVRELEKKFSGKDVI +ATRRI+RPPKKGSA QRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
+VHEAMLEDV PAEIVGKR RYR+DG+KIMKVFLD K +N+TEYKLET VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPITEA 191
DVVFEYP+ EA
Sbjct: 181 DVVFEYPVIEA 191
>gb|AAD44761.1| 40S ribosomal protein S7 homolog [Brassica oleracea]
gi|20139962|sp|Q9XH45|RS7_BRAOL 40S ribosomal protein S7
Length = 191
Score = 308 bits (789), Expect = 5e-83
Identities = 148/190 (77%), Positives = 169/190 (88%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++++ KIHKDK PTEFEE V QA FDLENT+QELKSDLKDLYIN AV +D++GNRKA
Sbjct: 1 MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVI+VP+RLRKAFRK+H +LVRELEKKFSG DVI +ATRRI+RPPKKGSA QRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
+VHEAMLEDV PAEIVGKR RYRVDG+KIMKV+L+PKERNNTEYKLET VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPITE 190
DVVFEYP+ +
Sbjct: 181 DVVFEYPVAD 190
>gb|AAM64364.1| 40S ribosomal protein S7-like [Arabidopsis thaliana]
Length = 190
Score = 305 bits (782), Expect = 3e-82
Identities = 148/188 (78%), Positives = 170/188 (89%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++++ KI+KDK+AEPTE EE V QALFDLENT+QELKS+LKDLYIN AV +D+SGNRKA
Sbjct: 1 MFSAQNKINKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVI+VP+RLRKAFRK+H +LVRELEKKFSGKDVI + TRRI+RPPKKG+A QRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
+VHEAMLEDV PAEIVGKR RYR+DGSKIMKVFLD KE+NNTEYKLET VYRKL+GK
Sbjct: 121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPI 188
DVVFEYP+
Sbjct: 181 DVVFEYPV 188
>emb|CAC01854.1| 40S ribosomal protein S7-like [Arabidopsis thaliana]
gi|15237278|ref|NP_197117.1| 40S ribosomal protein S7
(RPS7C) [Arabidopsis thaliana] gi|11276554|pir||T51483
40S ribosomal protein S7-like - Arabidopsis thaliana
Length = 190
Score = 305 bits (780), Expect = 6e-82
Identities = 148/188 (78%), Positives = 169/188 (89%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++++ KI KDK+AEPTE EE V QALFDLENT+QELKS+LKDLYIN AV +D+SGNRKA
Sbjct: 1 MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQRPRTRTLT 120
VVI+VP+RLRKAFRK+H +LVRELEKKFSGKDVI + TRRI+RPPKKG+A QRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120
Query: 121 AVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGK 180
+VHEAMLEDV PAEIVGKR RYR+DGSKIMKVFLD KE+NNTEYKLET VYRKL+GK
Sbjct: 121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPI 188
DVVFEYP+
Sbjct: 181 DVVFEYPV 188
>ref|XP_419936.1| PREDICTED: similar to ribosomal protein S7 [Gallus gallus]
Length = 288
Score = 202 bits (514), Expect = 4e-51
Identities = 102/191 (53%), Positives = 144/191 (74%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++S KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G RKA
Sbjct: 95 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 153
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 154 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 213
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++DGS+++KV LD ++NN E+K+ETF+ VY+K
Sbjct: 214 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 273
Query: 177 LSGKDVVFEYP 187
L+GKDVVFE+P
Sbjct: 274 LTGKDVVFEFP 284
>gb|AAK95189.1| 40S ribosomal protein S7 [Ictalurus punctatus]
gi|49036473|sp|Q90YR7|RS7_ICTPU 40S ribosomal protein S7
Length = 194
Score = 202 bits (513), Expect = 5e-51
Identities = 103/191 (53%), Positives = 144/191 (74%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++S KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G+RKA
Sbjct: 1 MFSSSAKIVKANGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKA 59
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP KAF+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 60 IIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++D S+++KV LD ++NN E+K+ETFA VY+K
Sbjct: 120 RTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKK 179
Query: 177 LSGKDVVFEYP 187
L+GKDVVFE+P
Sbjct: 180 LTGKDVVFEFP 190
>gb|AAN77896.1| ribosomal protein S7 [Petromyzon marinus]
Length = 194
Score = 202 bits (513), Expect = 5e-51
Identities = 102/191 (53%), Positives = 143/191 (74%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
MY++ KI K +P EFE + QA+ +LE + +LK+ L++LYI +A ++DV RKA
Sbjct: 1 MYSTSAKIVKPNGEKPDEFESGISQAILELE-MNSDLKAQLRELYITAAKEIDVGSGRKA 59
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP KAF+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 60 ILIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++D S+++KV LD ++NN E+K+ETF+AVY+K
Sbjct: 120 RTLTAVHDAILEDLVFPSEIVGKRIRVKMDASRLIKVHLDKSQQNNVEHKVETFSAVYKK 179
Query: 177 LSGKDVVFEYP 187
L+GKDV FE+P
Sbjct: 180 LTGKDVNFEFP 190
>ref|NP_001009832.1| ribosomal protein S7 [Felis catus] gi|6755376|ref|NP_035430.1|
ribosomal protein S7 [Mus musculus]
gi|57098089|ref|XP_532859.1| PREDICTED: hypothetical
protein XP_532859 [Canis familiaris]
gi|62420310|gb|AAX82027.1| unknown [Homo sapiens]
gi|55775790|gb|AAV65144.1| ribosomal protein S7 [Felis
catus] gi|60655919|gb|AAX32523.1| ribosomal protein S7
[synthetic construct] gi|55594424|ref|XP_515279.1|
PREDICTED: similar to 40S ribosomal protein S7 (S8) [Pan
troglodytes] gi|38303973|gb|AAH61901.1| Ribosomal
protein S7 [Homo sapiens] gi|48734988|gb|AAH71919.1|
Ribosomal protein S7 [Homo sapiens]
gi|12805115|gb|AAH02014.1| Ribosomal protein S7 [Mus
musculus] gi|12804027|gb|AAH02866.1| Ribosomal protein
S7 [Homo sapiens] gi|297172|emb|CAA37457.1| ribosomal
protein S7 [Rattus rattus]
gi|66730357|ref|NP_001019451.1| hypothetical protein
LOC497813 [Rattus norvegicus] gi|38051892|gb|AAH60557.1|
Hypothetical protein LOC497813 [Rattus norvegicus]
gi|2811284|gb|AAB97861.1| ribosomal protein S7 [Mus
musculus] gi|49065832|sp|P62082|RS7_MOUSE 40S ribosomal
protein S7 gi|49065831|sp|P62081|RS7_HUMAN 40S ribosomal
protein S7 gi|62287199|sp|Q5RT64|RS7_FELCA 40S ribosomal
protein S7 gi|49065830|sp|P62083|RS7_RAT 40S ribosomal
protein S7 (S8) gi|551251|emb|CAA81022.1| ribosomal
protein S7 [Homo sapiens] gi|4506741|ref|NP_001002.1|
ribosomal protein S7 [Homo sapiens]
gi|227241|prf||1617114A ribosomal protein S7
Length = 194
Score = 199 bits (507), Expect = 3e-50
Identities = 101/191 (52%), Positives = 143/191 (73%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++S KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G RKA
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 59
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++DGS+++KV LD ++NN E+K+ETF+ VY+K
Sbjct: 120 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179
Query: 177 LSGKDVVFEYP 187
L+GKDV FE+P
Sbjct: 180 LTGKDVNFEFP 190
>ref|XP_213053.2| PREDICTED: ribosomal protein S7 [Rattus norvegicus]
Length = 207
Score = 199 bits (507), Expect = 3e-50
Identities = 101/191 (52%), Positives = 143/191 (73%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++S KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G RKA
Sbjct: 14 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 72
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 73 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 132
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++DGS+++KV LD ++NN E+K+ETF+ VY+K
Sbjct: 133 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 192
Query: 177 LSGKDVVFEYP 187
L+GKDV FE+P
Sbjct: 193 LTGKDVNFEFP 203
>gb|AAX29111.1| ribosomal protein S7 [synthetic construct]
Length = 195
Score = 199 bits (507), Expect = 3e-50
Identities = 101/191 (52%), Positives = 143/191 (73%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++S KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G RKA
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 59
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++DGS+++KV LD ++NN E+K+ETF+ VY+K
Sbjct: 120 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179
Query: 177 LSGKDVVFEYP 187
L+GKDV FE+P
Sbjct: 180 LTGKDVNFEFP 190
>ref|XP_581800.1| PREDICTED: similar to 40S ribosomal protein S7 (S8), partial [Bos
taurus]
Length = 265
Score = 199 bits (507), Expect = 3e-50
Identities = 101/191 (52%), Positives = 143/191 (73%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M++S KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G RKA
Sbjct: 72 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 130
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 131 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 190
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLTAVH+A+LED+V P+EIVGKR+R ++DGS+++KV LD ++NN E+K+ETF+ VY+K
Sbjct: 191 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 250
Query: 177 LSGKDVVFEYP 187
L+GKDV FE+P
Sbjct: 251 LTGKDVNFEFP 261
>emb|CAH68965.1| ribosomal protein S7 [Danio rerio] gi|37748273|gb|AAH59562.1|
Hypothetical protein MGC73216 [Danio rerio]
gi|45504873|gb|AAS66961.1| ribosomal protein S7 [Danio
rerio] gi|49036465|sp|P62084|RS7_BRARE 40S ribosomal
protein S7 gi|41152175|ref|NP_957046.1| ribosomal
protein S7 [Danio rerio]
Length = 194
Score = 199 bits (506), Expect = 3e-50
Identities = 99/191 (51%), Positives = 144/191 (74%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M+++ KI K +P EFE + QAL +LE + +LK+ L++L+I +A +++V G+RKA
Sbjct: 1 MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELHITAAKEIEVGGSRKA 59
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S + RPR+
Sbjct: 60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLT VH+A+LED+V P+EIVGKR+R ++D S+++KV LD ++NN E+K+ETFA VY+K
Sbjct: 120 RTLTNVHDAILEDLVFPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKK 179
Query: 177 LSGKDVVFEYP 187
L+GKDV+FE+P
Sbjct: 180 LTGKDVIFEFP 190
>emb|CAA64412.1| ribosomal protein S7 [Takifugu rubripes]
gi|1710775|sp|P50894|RS7_FUGRU 40S ribosomal protein S7
Length = 194
Score = 198 bits (504), Expect = 6e-50
Identities = 99/191 (51%), Positives = 145/191 (75%), Gaps = 5/191 (2%)
Query: 1 MYTSRKKIHKDKDAEPTEFEETVGQALFDLENTHQELKSDLKDLYINSAVQVDVSGNRKA 60
M+++ KI K +P EFE + QAL +LE + +LK+ L++L I +A +++V G+RKA
Sbjct: 1 MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKA 59
Query: 61 VVIHVPYRLRKAFRKVHVKLVRELEKKFSGKDVILIATRRILRPPKKGSAAQ----RPRT 116
++I VP K+F+K+ V+LVRELEKKFSGK V+ IA RRIL P + S ++ RPR+
Sbjct: 60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRSKNKQKRPRS 119
Query: 117 RTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRK 176
RTLT+VH+A+LED+V P+EIVGKR+R ++D S+++KV LD ++NN E+K+ETF+ VY+K
Sbjct: 120 RTLTSVHDAILEDLVFPSEIVGKRIRVKMDSSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179
Query: 177 LSGKDVVFEYP 187
L+GKDVVFE+P
Sbjct: 180 LTGKDVVFEFP 190
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.135 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303,813,016
Number of Sequences: 2540612
Number of extensions: 11768905
Number of successful extensions: 32191
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 31866
Number of HSP's gapped (non-prelim): 144
length of query: 191
length of database: 863,360,394
effective HSP length: 121
effective length of query: 70
effective length of database: 555,946,342
effective search space: 38916243940
effective search space used: 38916243940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0073.3