BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0060.17
(128 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198992.2| crooked neck protein, putative / cell cycle pro... 197 4e-50
gb|AAN72051.1| cell cycle control crn (crooked neck) protein-lik... 197 4e-50
dbj|BAB01413.1| probable cell cycle control protein; crooked nec... 184 4e-46
ref|NP_187927.1| crooked neck protein, putative / cell cycle pro... 184 4e-46
dbj|BAB08244.1| CRN (crooked neck) protein [Arabidopsis thaliana... 178 3e-44
ref|XP_475092.1| putative crooked neck protein [Oryza sativa (ja... 176 9e-44
dbj|BAB10652.1| cell cycle control crn (crooked neck) protein-li... 169 1e-41
gb|AAH44369.1| Similar to crooked neck protein [Danio rerio] gi|... 150 5e-36
ref|XP_604909.1| PREDICTED: similar to crooked neck protein, par... 150 7e-36
emb|CAI42112.1| Crn, crooked neck-like 1 (Drosophila) [Homo sapi... 149 2e-35
emb|CAI42113.1| Crn, crooked neck-like 1 (Drosophila) [Homo sapi... 149 2e-35
dbj|BAB14303.1| unnamed protein product [Homo sapiens] gi|104350... 149 2e-35
gb|AAL39004.1| MSTP021 [Homo sapiens] 149 2e-35
ref|XP_514541.1| PREDICTED: similar to dJ1002M8.2 (ortholog of D... 149 2e-35
dbj|BAB14659.1| unnamed protein product [Homo sapiens] 149 2e-35
ref|XP_419315.1| PREDICTED: similar to crooked neck protein [Gal... 149 2e-35
emb|CAH10656.1| hypothetical protein [Homo sapiens] 149 2e-35
sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 (Crooked neck ... 149 2e-35
gb|AAK01924.1| CGI-201 protein, short form [Homo sapiens] 149 2e-35
gb|AAF65571.2| CGI-201 protein [Homo sapiens] 149 2e-35
>ref|NP_198992.2| crooked neck protein, putative / cell cycle protein, putative
[Arabidopsis thaliana]
Length = 705
Score = 197 bits (502), Expect = 4e-50
Identities = 97/115 (84%), Positives = 104/115 (90%)
Query: 12 KFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKL 71
KFSFA +WLLAAQFEIRQLNL GA ILG+AIGKAPKDKI KKYIEIELQLGN+DRCRKL
Sbjct: 419 KFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKL 478
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWKVNI 126
YE+YLEW+ ENCYAWSKYA LERSL ET+RAR+IFELAISQPA DMPELLWK I
Sbjct: 479 YERYLEWSPENCYAWSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYI 533
Score = 54.3 bits (129), Expect = 6e-07
Identities = 28/91 (30%), Positives = 53/91 (57%), Gaps = 2/91 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+WL A+FE++ + A + A+ P+ D++ KYI +E LGNI R+++E+++
Sbjct: 128 LWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWM 187
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFE 107
+W+ + W + E +E +RAR+I+E
Sbjct: 188 DWSPDQ-QGWLSFIKFELRYNEIERARTIYE 217
Score = 44.3 bits (103), Expect = 7e-04
Identities = 29/108 (26%), Positives = 51/108 (46%), Gaps = 3/108 (2%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEW 78
WL +FE+R ++ A I + PK +Y + E++ G + RCR +YE+ E
Sbjct: 196 WLSFIKFELRYNEIERARTIYERFVLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEK 255
Query: 79 ALENCYA---WSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
++ A + +A E E +RAR I++ A+ E L++
Sbjct: 256 LADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYR 303
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/117 (25%), Positives = 53/117 (44%), Gaps = 11/117 (9%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGN--------ID 66
+++ A+FE R ++ A I A+ PK + + +K++ E Q G+ +
Sbjct: 265 LFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVG 324
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE + + N +W Y LE S+ DR R I+E AI+ + W+
Sbjct: 325 KRRFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQ 381
Score = 39.7 bits (91), Expect = 0.017
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 31 NLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA 90
N+ GA I + +P + +I+ EL+ I+R R +YE+++ A+ +YA
Sbjct: 175 NIAGARQIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERFV-LCHPKVSAYIRYA 233
Query: 91 *LERSLSETDRARSIFELAISQPASD 116
E E R RS++E A + A D
Sbjct: 234 KFEMKGGEVARCRSVYERATEKLADD 259
Score = 37.4 bits (85), Expect = 0.082
Identities = 33/127 (25%), Positives = 52/127 (39%), Gaps = 26/127 (20%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+ E + + A I AI + D + K YI+ E+ G ++R R LYE+
Sbjct: 493 WSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYIDFEISEGELERTRALYERL 552
Query: 76 LEWALENCYAWSKYA*LERSLSETD----------------------RARSIFELAISQP 113
L+ ++ W +A E S +E + RAR+IF+ A +
Sbjct: 553 LD-RTKHYKVWVSFAKFEASAAELEEDENEDEDQEEDVIEHKKDCIKRARAIFDRANTYY 611
Query: 114 ASDMPEL 120
PEL
Sbjct: 612 KDSTPEL 618
Score = 33.5 bits (75), Expect = 1.2
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 45 KAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARS 104
+ PK KI + +L R RK +E + A N W KYA E S + RARS
Sbjct: 58 RPPKQKITDSTELSDYRL----RRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARS 113
Query: 105 IFELAI 110
++E AI
Sbjct: 114 VWERAI 119
>gb|AAN72051.1| cell cycle control crn (crooked neck) protein-like [Arabidopsis
thaliana]
Length = 705
Score = 197 bits (502), Expect = 4e-50
Identities = 97/115 (84%), Positives = 104/115 (90%)
Query: 12 KFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKL 71
KFSFA +WLLAAQFEIRQLNL GA ILG+AIGKAPKDKI KKYIEIELQLGN+DRCRKL
Sbjct: 419 KFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKL 478
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWKVNI 126
YE+YLEW+ ENCYAWSKYA LERSL ET+RAR+IFELAISQPA DMPELLWK I
Sbjct: 479 YERYLEWSPENCYAWSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYI 533
Score = 54.3 bits (129), Expect = 6e-07
Identities = 28/91 (30%), Positives = 53/91 (57%), Gaps = 2/91 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+WL A+FE++ + A + A+ P+ D++ KYI +E LGNI R+++E+++
Sbjct: 128 LWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWM 187
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFE 107
+W+ + W + E +E +RAR+I+E
Sbjct: 188 DWSPDQ-QGWLSFIKFELRYNEIERARTIYE 217
Score = 44.3 bits (103), Expect = 7e-04
Identities = 29/108 (26%), Positives = 51/108 (46%), Gaps = 3/108 (2%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEW 78
WL +FE+R ++ A I + PK +Y + E++ G + RCR +YE+ E
Sbjct: 196 WLSFIKFELRYNEIERARTIYERFVLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEK 255
Query: 79 ALENCYA---WSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
++ A + +A E E +RAR I++ A+ E L++
Sbjct: 256 LADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYR 303
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/117 (25%), Positives = 53/117 (44%), Gaps = 11/117 (9%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGN--------ID 66
+++ A+FE R ++ A I A+ PK + + +K++ E Q G+ +
Sbjct: 265 LFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVG 324
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE + + N +W Y LE S+ DR R I+E AI+ + W+
Sbjct: 325 KRRFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQ 381
Score = 39.7 bits (91), Expect = 0.017
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 31 NLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA 90
N+ GA I + +P + +I+ EL+ I+R R +YE+++ A+ +YA
Sbjct: 175 NIAGARQIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERFV-LCHPKVSAYIRYA 233
Query: 91 *LERSLSETDRARSIFELAISQPASD 116
E E R RS++E A + A D
Sbjct: 234 KFEMKGGEVARCRSVYERATEKLADD 259
Score = 37.4 bits (85), Expect = 0.082
Identities = 33/127 (25%), Positives = 52/127 (39%), Gaps = 26/127 (20%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+ E + + A I AI + D + K YI+ E+ G ++R R LYE+
Sbjct: 493 WSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYIDFEISEGELERTRALYERL 552
Query: 76 LEWALENCYAWSKYA*LERSLSETD----------------------RARSIFELAISQP 113
L+ ++ W +A E S +E + RAR+IF+ A +
Sbjct: 553 LD-RTKHYKVWVSFAKFEASAAELEEDENEDEDQEEDVIEHKKDCIKRARAIFDRANTYY 611
Query: 114 ASDMPEL 120
PEL
Sbjct: 612 KDSTPEL 618
Score = 33.5 bits (75), Expect = 1.2
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 45 KAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARS 104
+ PK KI + +L R RK +E + A N W KYA E S + RARS
Sbjct: 58 RPPKQKITDSTELSDYRL----RRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARS 113
Query: 105 IFELAI 110
++E AI
Sbjct: 114 VWERAI 119
>dbj|BAB01413.1| probable cell cycle control protein; crooked neck-like protein
[Arabidopsis thaliana]
Length = 675
Score = 184 bits (467), Expect = 4e-46
Identities = 91/115 (79%), Positives = 98/115 (85%)
Query: 12 KFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKL 71
KFSFA +WLLAAQ EIRQLNL GA ILG+AIGKAPKDKI KKYIEIELQL NIDRCRKL
Sbjct: 394 KFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKL 453
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWKVNI 126
YE+YLEW+ NCYAW KYA E SL+ET+R R+IFELAISQPA DMPELLWK I
Sbjct: 454 YERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYI 508
Score = 43.5 bits (101), Expect = 0.001
Identities = 34/122 (27%), Positives = 51/122 (40%), Gaps = 21/122 (17%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+FE+ + I AI + D + K YI+ E+ G ++R R LYE+
Sbjct: 468 WRKYAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYIDFEISEGELERTRALYERL 527
Query: 76 LEWALENCYAWSKYA*LERSLSE-----------------TDRARSIFELAISQPASDMP 118
L+ ++C W +A E S +E RAR IF+ A + P
Sbjct: 528 LD-RTKHCKVWVDFAKFEASAAEHKEDEEEEDAIERKKDGIKRAREIFDRANTYNKDSTP 586
Query: 119 EL 120
EL
Sbjct: 587 EL 588
Score = 41.6 bits (96), Expect = 0.004
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 23 AQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYLEWALE 81
A FE++ ++ A + A+ P+ D++ K+I +E +LGNI R++ E+++ + +
Sbjct: 116 ADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILERWIHCSPD 175
Query: 82 NCYAWSKYA*LERSLSETDRARSIFE 107
AW + E +E + ARSI+E
Sbjct: 176 Q-QAWLCFIKFELKYNEIECARSIYE 200
Score = 37.7 bits (86), Expect = 0.063
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLE 77
+W E + N+ GA IL I +P + +I+ EL+ I+ R +YE+++
Sbjct: 145 LWYKFIHMEEKLGNIAGARQILERWIHCSPDQQAWLCFIKFELKYNEIECARSIYERFV- 203
Query: 78 WALENCYAWSKYA*LERSLSETDRARSIFELAISQPASD 116
A+ +YA E + + A +FE A + A D
Sbjct: 204 LCHPKVSAYIRYAKFEMKHGQVELAMKVFERAKKELADD 242
>ref|NP_187927.1| crooked neck protein, putative / cell cycle protein, putative
[Arabidopsis thaliana]
Length = 657
Score = 184 bits (467), Expect = 4e-46
Identities = 91/115 (79%), Positives = 98/115 (85%)
Query: 12 KFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKL 71
KFSFA +WLLAAQ EIRQLNL GA ILG+AIGKAPKDKI KKYIEIELQL NIDRCRKL
Sbjct: 376 KFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKL 435
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWKVNI 126
YE+YLEW+ NCYAW KYA E SL+ET+R R+IFELAISQPA DMPELLWK I
Sbjct: 436 YERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYI 490
Score = 45.1 bits (105), Expect = 4e-04
Identities = 26/91 (28%), Positives = 51/91 (55%), Gaps = 2/91 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+W+ A FE++ ++ A + A+ P+ D++ K+I +E +LGNI R++ E+++
Sbjct: 93 VWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILERWI 152
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFE 107
+ + AW + E +E + ARSI+E
Sbjct: 153 HCSPDQ-QAWLCFIKFELKYNEIECARSIYE 182
Score = 43.5 bits (101), Expect = 0.001
Identities = 34/122 (27%), Positives = 51/122 (40%), Gaps = 21/122 (17%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+FE+ + I AI + D + K YI+ E+ G ++R R LYE+
Sbjct: 450 WRKYAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYIDFEISEGELERTRALYERL 509
Query: 76 LEWALENCYAWSKYA*LERSLSE-----------------TDRARSIFELAISQPASDMP 118
L+ ++C W +A E S +E RAR IF+ A + P
Sbjct: 510 LD-RTKHCKVWVDFAKFEASAAEHKEDEEEEDAIERKKDGIKRAREIFDRANTYNKDSTP 568
Query: 119 EL 120
EL
Sbjct: 569 EL 570
Score = 37.7 bits (86), Expect = 0.063
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLE 77
+W E + N+ GA IL I +P + +I+ EL+ I+ R +YE+++
Sbjct: 127 LWYKFIHMEEKLGNIAGARQILERWIHCSPDQQAWLCFIKFELKYNEIECARSIYERFV- 185
Query: 78 WALENCYAWSKYA*LERSLSETDRARSIFELAISQPASD 116
A+ +YA E + + A +FE A + A D
Sbjct: 186 LCHPKVSAYIRYAKFEMKHGQVELAMKVFERAKKELADD 224
>dbj|BAB08244.1| CRN (crooked neck) protein [Arabidopsis thaliana]
gi|15237354|ref|NP_199411.1| crooked neck protein,
putative / cell cycle protein, putative [Arabidopsis
thaliana]
Length = 673
Score = 178 bits (451), Expect = 3e-44
Identities = 87/115 (75%), Positives = 99/115 (85%)
Query: 12 KFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKL 71
KFSFA +WLLAA++EIRQLNL GA ILG+AIGKAPK KI KKYIE+EL+L NIDRCRKL
Sbjct: 406 KFSFAKIWLLAAEYEIRQLNLTGARQILGNAIGKAPKVKIFKKYIEMELKLVNIDRCRKL 465
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWKVNI 126
YE++LEW+ ENCYAW YA E SL+ET+RAR+IFELAISQPA DMPELLWK I
Sbjct: 466 YERFLEWSPENCYAWRNYAEFEISLAETERARAIFELAISQPALDMPELLWKTYI 520
Score = 54.3 bits (129), Expect = 6e-07
Identities = 27/91 (29%), Positives = 55/91 (59%), Gaps = 2/91 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+W+ A+FE++ + A + ++ P+ D++ +KYI +E +LGN+ R+++E+++
Sbjct: 114 LWVKYAEFEMKNKFVNNARNVWDRSVTLLPRVDQLWEKYIYMEEKLGNVTGARQIFERWM 173
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFE 107
W+ + AW + E +E +RARSI+E
Sbjct: 174 NWSPDQ-KAWLCFIKFELRYNEIERARSIYE 203
Score = 46.2 bits (108), Expect = 2e-04
Identities = 35/110 (31%), Positives = 50/110 (44%), Gaps = 9/110 (8%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+FEI + A I AI + D + K YI+ E+ G ++ R LYE+
Sbjct: 480 WRNYAEFEISLAETERARAIFELAISQPALDMPELLWKTYIDFEISEGEFEKTRALYERL 539
Query: 76 LEWALENCYAWSKYA*LERSLSE-----TDRARSIFELAISQPASDMPEL 120
L+ ++C W +A E S SE AR IF+ A + PEL
Sbjct: 540 LD-RTKHCKVWISFAKFEASASEHKEDGIKSARVIFDRANTYYKDTTPEL 588
Score = 38.1 bits (87), Expect = 0.048
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 23 AQFEIRQLNLKGAHVILGSA---IGKAPKDKILKKYIEIELQLGN--------IDRCRKL 71
A+FE R ++ A I A I K +++ KK++ E Q G+ + + R
Sbjct: 257 AEFEERCKEVERARFIYKFALDHIRKGRAEELYKKFVAFEKQYGDKEGIEDAIVGKKRFE 316
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
YE + N +W Y LE S+ DR R I+E AI+ + W+
Sbjct: 317 YEDEVSKNPLNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAQEKRFWQ 368
Score = 36.6 bits (83), Expect = 0.14
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLE 77
+W E + N+ GA I + +P K +I+ EL+ I+R R +YE+++
Sbjct: 148 LWEKYIYMEEKLGNVTGARQIFERWMNWSPDQKAWLCFIKFELRYNEIERARSIYERFV- 206
Query: 78 WALENCYAWSKYA*LE-RSLSETDRARSIFELAISQPASD 116
A+ +YA E + + AR ++E A+ + A+D
Sbjct: 207 LCHPKVSAFIRYAKFEMKRGGQVKLAREVYERAVDKLAND 246
Score = 35.8 bits (81), Expect = 0.24
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGN-IDRCRKLYEKYLE 77
WL +FE+R ++ A I + PK +Y + E++ G + R++YE+ ++
Sbjct: 182 WLCFIKFELRYNEIERARSIYERFVLCHPKVSAFIRYAKFEMKRGGQVKLAREVYERAVD 241
Query: 78 WALENCYA---WSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ A + +A E E +RAR I++ A+ E L+K
Sbjct: 242 KLANDEEAEILFVSFAEFEERCKEVERARFIYKFALDHIRKGRAEELYK 290
Score = 32.3 bits (72), Expect = 2.6
Identities = 23/66 (34%), Positives = 32/66 (47%), Gaps = 4/66 (6%)
Query: 45 KAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARS 104
+ PK KI + +L R RK +E + A N W KYA E S + RARS
Sbjct: 44 RPPKQKITDSTELSDYRL----RRRKEFEDQIRRARWNIQVWVKYAKWEESQMDYARARS 99
Query: 105 IFELAI 110
++E A+
Sbjct: 100 VWERAL 105
>ref|XP_475092.1| putative crooked neck protein [Oryza sativa (japonica
cultivar-group)] gi|46576043|gb|AAT01404.1| putative
crooked neck protein [Oryza sativa (japonica
cultivar-group)]
Length = 723
Score = 176 bits (447), Expect = 9e-44
Identities = 84/113 (74%), Positives = 96/113 (84%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MWL+AAQFEIRQ NLK A ILG+AIG +PK KI KKYIEIEL LGN DRCR
Sbjct: 433 KKFTFAKMWLMAAQFEIRQRNLKAARQILGNAIGMSPKGKIFKKYIEIELYLGNFDRCRT 492
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEKY+EW+ NCYAW KYA LE++LSETDRARSI+ELAI+QPA D PE+LWK
Sbjct: 493 LYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAIAQPALDTPEVLWK 545
Score = 54.7 bits (130), Expect = 5e-07
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+WL A+FE+R + A + A+ P+ D++ KYI +E LG + R+++E+++
Sbjct: 143 LWLKYAEFEMRNRFVNHARNVWDRAVSLLPRVDQLWYKYIHMEELLGAVANARQVFERWM 202
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFELAISQ 112
W + W+ Y E E +RAR+I+E +++
Sbjct: 203 AWRPDTA-GWNSYIKFELRYGEVERARAIYERFVAE 237
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK---DKILKKYIEIELQLGN--------ID 66
+++ A+FE R ++ A I A+ + PK +++ +K++ E Q G+ +
Sbjct: 280 LFVAFAEFEERCREVERARAIYKYALDRVPKGQAEELYRKFLAFEKQFGDREGIEDAIVG 339
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQ-PASD 116
+ R YE + N +W Y LE S+ DR R ++E AI+ P +D
Sbjct: 340 KRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNNDRIREVYERAIANIPPAD 390
Score = 33.9 bits (76), Expect = 0.91
Identities = 19/58 (32%), Positives = 31/58 (52%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E Q + R R +YE+ L+ A + W KYA E + AR++++ A+S
Sbjct: 112 KYAKWEEQQRDFARARSVYERALDVAHRDHTLWLKYAEFEMRNRFVNHARNVWDRAVS 169
Score = 33.1 bits (74), Expect = 1.5
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 45 KAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARS 104
+ PK KI E +L R RK +E + N AW KYA E + RARS
Sbjct: 73 RPPKQKITDSIELSEYRL----RRRKEFEDVIRRVRWNVNAWVKYAKWEEQQRDFARARS 128
Query: 105 IFELAISQPASDMPELLW 122
++E A+ D LW
Sbjct: 129 VYERALDVAHRD--HTLW 144
Score = 32.0 bits (71), Expect = 3.4
Identities = 31/128 (24%), Positives = 46/128 (35%), Gaps = 27/128 (21%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+ E A I AI + D + K+Y++ E+ DR R+LYE+
Sbjct: 508 WRKYAELEKNLSETDRARSIYELAIAQPALDTPEVLWKEYLQFEIDENEFDRTRELYERL 567
Query: 76 LEWALENCYAWSKYA*LERS-----------------------LSETDRARSIFELAISQ 112
L+ ++ W Y E S + R R+IFE A
Sbjct: 568 LD-RTKHLKVWISYTEFEASAGLAGEDGESEEIKKEVSYHEQQIERVRRCRAIFERAFEY 626
Query: 113 PASDMPEL 120
+ PEL
Sbjct: 627 FRTSAPEL 634
>dbj|BAB10652.1| cell cycle control crn (crooked neck) protein-like [Arabidopsis
thaliana]
Length = 665
Score = 169 bits (429), Expect = 1e-41
Identities = 83/99 (83%), Positives = 89/99 (89%)
Query: 28 RQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWS 87
RQLNL GA ILG+AIGKAPKDKI KKYIEIELQLGN+DRCRKLYE+YLEW+ ENCYAWS
Sbjct: 395 RQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKLYERYLEWSPENCYAWS 454
Query: 88 KYA*LERSLSETDRARSIFELAISQPASDMPELLWKVNI 126
KYA LERSL ET+RAR+IFELAISQPA DMPELLWK I
Sbjct: 455 KYAELERSLVETERARAIFELAISQPALDMPELLWKAYI 493
Score = 54.3 bits (129), Expect = 6e-07
Identities = 28/91 (30%), Positives = 53/91 (57%), Gaps = 2/91 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+WL A+FE++ + A + A+ P+ D++ KYI +E LGNI R+++E+++
Sbjct: 114 LWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWM 173
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFE 107
+W+ + W + E +E +RAR+I+E
Sbjct: 174 DWSPDQ-QGWLSFIKFELRYNEIERARTIYE 203
Score = 44.3 bits (103), Expect = 7e-04
Identities = 29/108 (26%), Positives = 51/108 (46%), Gaps = 3/108 (2%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEW 78
WL +FE+R ++ A I + PK +Y + E++ G + RCR +YE+ E
Sbjct: 182 WLSFIKFELRYNEIERARTIYERFVLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEK 241
Query: 79 ALENCYA---WSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
++ A + +A E E +RAR I++ A+ E L++
Sbjct: 242 LADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYR 289
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/117 (25%), Positives = 53/117 (44%), Gaps = 11/117 (9%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGN--------ID 66
+++ A+FE R ++ A I A+ PK + + +K++ E Q G+ +
Sbjct: 251 LFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVG 310
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE + + N +W Y LE S+ DR R I+E AI+ + W+
Sbjct: 311 KRRFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQ 367
Score = 39.7 bits (91), Expect = 0.017
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 31 NLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA 90
N+ GA I + +P + +I+ EL+ I+R R +YE+++ A+ +YA
Sbjct: 161 NIAGARQIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERFV-LCHPKVSAYIRYA 219
Query: 91 *LERSLSETDRARSIFELAISQPASD 116
E E R RS++E A + A D
Sbjct: 220 KFEMKGGEVARCRSVYERATEKLADD 245
Score = 37.4 bits (85), Expect = 0.082
Identities = 33/127 (25%), Positives = 52/127 (39%), Gaps = 26/127 (20%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W A+ E + + A I AI + D + K YI+ E+ G ++R R LYE+
Sbjct: 453 WSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYIDFEISEGELERTRALYERL 512
Query: 76 LEWALENCYAWSKYA*LERSLSETD----------------------RARSIFELAISQP 113
L+ ++ W +A E S +E + RAR+IF+ A +
Sbjct: 513 LD-RTKHYKVWVSFAKFEASAAELEEDENEDEDQEEDVIEHKKDCIKRARAIFDRANTYY 571
Query: 114 ASDMPEL 120
PEL
Sbjct: 572 KDSTPEL 578
Score = 33.5 bits (75), Expect = 1.2
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 45 KAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARS 104
+ PK KI + +L R RK +E + A N W KYA E S + RARS
Sbjct: 44 RPPKQKITDSTELSDYRL----RRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARS 99
Query: 105 IFELAI 110
++E AI
Sbjct: 100 VWERAI 105
>gb|AAH44369.1| Similar to crooked neck protein [Danio rerio]
gi|41055634|ref|NP_957240.1| similar to crooked neck
protein [Danio rerio]
Length = 753
Score = 150 bits (380), Expect = 5e-36
Identities = 73/113 (64%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA +WLL QFEIRQ NL+ A LG+AIGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 406 KKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRK 465
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEKYLE++ ENC W K+A LE L +TDR+R+IFELAI QP DMPE+LWK
Sbjct: 466 LYEKYLEFSPENCTTWIKFAELETILGDTDRSRAIFELAIGQPRLDMPEVLWK 518
Score = 58.2 bits (139), Expect = 4e-08
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 18 MWLLAAQFEIRQLNLKGAHVILGSAIGKAPK-DKILKKYIEIELQLGNIDRCRKLYEKYL 76
+WL A+ E++ + A I AI P+ ++ KY +E LGNI CR+++E+++
Sbjct: 116 LWLKYAEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRQVFERWM 175
Query: 77 EWALENCYAWSKYA*LERSLSETDRARSIFE 107
EW E AW Y E E D+ARSI+E
Sbjct: 176 EWEPEE-QAWHSYINFELRYKEVDKARSIYE 205
Score = 39.7 bits (91), Expect = 0.017
Identities = 28/106 (26%), Positives = 50/106 (46%), Gaps = 11/106 (10%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGN--------I 65
N+++ A+FE +Q + VI A+ + PK + + K Y E + G+ +
Sbjct: 252 NLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIV 311
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
+ R YE+ ++ N AW Y L S ++ D R ++E AI+
Sbjct: 312 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIA 357
Score = 39.3 bits (90), Expect = 0.022
Identities = 20/58 (34%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L + R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 85 KYAQWEESLQEVQRSRSIYERALDVDHRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 142
Score = 38.5 bits (88), Expect = 0.037
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 31 NLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA 90
N+ G + + P+++ YI EL+ +D+ R +YE ++ W KYA
Sbjct: 163 NIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYENFV-MVHPEVKNWIKYA 221
Query: 91 *LERSLSETDRARSIFELAI 110
E R R +FE A+
Sbjct: 222 HFEEKHGYVARGRKVFERAV 241
Score = 36.2 bits (82), Expect = 0.18
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKLYEKYLEW 78
W FE+R + A I + + P+ K KY E + G + R RK++E+ +E+
Sbjct: 184 WHSYINFELRYKEVDKARSIYENFVMVHPEVKNWIKYAHFEEKHGYVARGRKVFERAVEF 243
Query: 79 -----ALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
EN Y +A E E +R R I++ A+ + + L+K
Sbjct: 244 FGEEQVSENLYV--AFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFK 291
Score = 30.8 bits (68), Expect = 7.7
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 86 WSKYA*LERSLSETDRARSIFELAI 110
W KYA E SL E R+RSI+E A+
Sbjct: 83 WIKYAQWEESLQEVQRSRSIYERAL 107
>ref|XP_604909.1| PREDICTED: similar to crooked neck protein, partial [Bos taurus]
Length = 157
Score = 150 bits (379), Expect = 7e-36
Identities = 73/113 (64%), Positives = 89/113 (78%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MWLL AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 15 KKFTFAKMWLLYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRK 74
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + +RAR+I+ELAISQP SDMPE+LWK
Sbjct: 75 LYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRSDMPEVLWK 127
>emb|CAI42112.1| Crn, crooked neck-like 1 (Drosophila) [Homo sapiens]
Length = 836
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 556 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 615
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 616 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 668
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 235 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 292
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 289 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 343
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 344 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 391
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 402 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 461
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 462 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 519
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 214 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 257
>emb|CAI42113.1| Crn, crooked neck-like 1 (Drosophila) [Homo sapiens]
Length = 848
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 568 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 627
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 628 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 680
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 247 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 301 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 355
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 356 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 403
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 414 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 473
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 474 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 531
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 226 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 269
>dbj|BAB14303.1| unnamed protein product [Homo sapiens] gi|10435092|dbj|BAB14485.1|
unnamed protein product [Homo sapiens]
Length = 564
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 284 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 343
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 344 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 396
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 17 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 71
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 72 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 119
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 130 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 189
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 190 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 247
>gb|AAL39004.1| MSTP021 [Homo sapiens]
Length = 687
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 407 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 466
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 467 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 519
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 86 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 140 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 194
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 195 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 242
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 253 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 312
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 313 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 370
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 108
>ref|XP_514541.1| PREDICTED: similar to dJ1002M8.2 (ortholog of Drosophila crooked
neck (CRN)) [Pan troglodytes]
Length = 769
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 489 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 548
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 549 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 601
Score = 42.0 bits (97), Expect = 0.003
Identities = 30/128 (23%), Positives = 49/128 (37%), Gaps = 24/128 (18%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 202 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 256
Query: 62 LGNIDRCRKLYEKYLEWALENC-------------------YAWSKYA*LERSLSETDRA 102
+DR R +YE+Y+ W C W KYA E + A
Sbjct: 257 YKEVDRARTIYERYILWTRSPCCFAWYFLNSLALVLVHPDVKNWIKYARFEEKHAYFAHA 316
Query: 103 RSIFELAI 110
R ++E A+
Sbjct: 317 RKVYERAV 324
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 148 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 205
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 335 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 394
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 395 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 452
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 127 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 170
>dbj|BAB14659.1| unnamed protein product [Homo sapiens]
Length = 512
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 232 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 291
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 292 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 344
Score = 37.0 bits (84), Expect = 0.11
Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 1/64 (1%)
Query: 47 PKDKILKKYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIF 106
P+++ YI EL+ +DR R +YE+++ + W KYA E + AR ++
Sbjct: 5 PEEQAWHSYINFELRYKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVY 63
Query: 107 ELAI 110
E A+
Sbjct: 64 ERAV 67
Score = 33.1 bits (74), Expect = 1.5
Identities = 28/118 (23%), Positives = 50/118 (41%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 78 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 137
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R +E AI+ + WK
Sbjct: 138 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREAYERAIANVPPIQEKRHWK 195
>ref|XP_419315.1| PREDICTED: similar to crooked neck protein [Gallus gallus]
Length = 666
Score = 149 bits (375), Expect = 2e-35
Identities = 73/112 (65%), Positives = 88/112 (78%)
Query: 12 KFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRKL 71
KF+FA +WLL AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRKL
Sbjct: 387 KFTFAKIWLLYAQFEIRQKNLPLARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKL 446
Query: 72 YEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
YEK+LE+A ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 447 YEKFLEFAPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 498
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 85 KYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKYAEMEMKNRQVNHARNIWDRAIT 142
Score = 37.4 bits (85), Expect = 0.082
Identities = 26/109 (23%), Positives = 47/109 (42%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ G+ + + P+++ YI EL+
Sbjct: 139 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGSRQVFERWMEWQPEEQAWHSYINFELR 193
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E AR ++E A+
Sbjct: 194 YKEVDRARTIYERFV-IVHPDVKNWIKYARFEEKHCYFAHARKVYERAV 241
Score = 37.0 bits (84), Expect = 0.11
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + PK + K Y E + G+ +
Sbjct: 252 HLYVAFAKFEENQKEFERVRVIYKYALDRIPKQDAQNLFKNYTIFEKKFGDRRGIEDIIV 311
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S ++ + R ++E AI+ + WK
Sbjct: 312 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDADAETVREVYERAIANVPPIQEKRYWK 369
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 64 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 107
Score = 30.8 bits (68), Expect = 7.7
Identities = 24/97 (24%), Positives = 44/97 (44%), Gaps = 7/97 (7%)
Query: 19 WLLAAQFEIRQLNLKGAHVILGSAIGKAPKDK---ILKKYIEIELQLGNIDRCRKLYEKY 75
W+ A+ E ++ A I AI + D + K YI+ E++ ++ R LY +
Sbjct: 461 WIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRL 520
Query: 76 LEWALENCYAWSKYA*LERSLSETD---RARSIFELA 109
L+ ++ W +A E S + + + R I+E A
Sbjct: 521 LQ-RTQHVKVWISFAQFELSAGKEESLSKCRQIYEEA 556
>emb|CAH10656.1| hypothetical protein [Homo sapiens]
Length = 728
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 448 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 507
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 508 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 560
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 127 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 184
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 181 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 235
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 236 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 283
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 294 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 353
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 354 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 411
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 106 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 149
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 (Crooked neck homolog) (hCrn)
gi|12711633|gb|AAK01925.1| CGI-201 protein, type II
[Homo sapiens]
Length = 848
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 568 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 627
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 628 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 680
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 247 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 301 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 355
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 356 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 403
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 414 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 473
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 474 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 531
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 226 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 269
>gb|AAK01924.1| CGI-201 protein, short form [Homo sapiens]
Length = 687
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 407 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 466
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 467 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 519
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 86 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 140 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 194
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 195 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 242
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 253 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 312
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 313 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 370
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 108
>gb|AAF65571.2| CGI-201 protein [Homo sapiens]
Length = 836
Score = 149 bits (375), Expect = 2e-35
Identities = 72/113 (63%), Positives = 88/113 (77%)
Query: 11 QKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQLGNIDRCRK 70
+KF+FA MW+L AQFEIRQ NL A LG++IGK PK+K+ K YIE+ELQL DRCRK
Sbjct: 556 KKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRK 615
Query: 71 LYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
LYEK+LE+ ENC +W K+A LE L + DRAR+I+ELAISQP DMPE+LWK
Sbjct: 616 LYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWK 668
Score = 40.8 bits (94), Expect = 0.007
Identities = 21/58 (36%), Positives = 32/58 (54%)
Query: 54 KYIEIELQLGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAIS 111
KY + E L I R R +YE+ L+ N W KYA +E + + AR+I++ AI+
Sbjct: 235 KYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 292
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/109 (24%), Positives = 48/109 (43%), Gaps = 6/109 (5%)
Query: 2 QGVSTLDTSQKFSFANMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKDKILKKYIEIELQ 61
+ ++TL +F W E N+ GA + + P+++ YI EL+
Sbjct: 289 RAITTLPRVNQF-----WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 343
Query: 62 LGNIDRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
+DR R +YE+++ + W KYA E + AR ++E A+
Sbjct: 344 YKEVDRARTIYERFV-LVHPDVKNWIKYARFEEKHAYFAHARKVYERAV 391
Score = 34.7 bits (78), Expect = 0.53
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Query: 17 NMWLLAAQFEIRQLNLKGAHVILGSAIGKAPKD---KILKKYIEIELQLGN--------I 65
++++ A+FE Q + VI A+ + K ++ K Y E + G+ +
Sbjct: 402 HLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 461
Query: 66 DRCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAISQPASDMPELLWK 123
+ R YE+ ++ N AW Y L S +E + R ++E AI+ + WK
Sbjct: 462 SKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 519
Score = 32.3 bits (72), Expect = 2.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 67 RCRKLYEKYLEWALENCYAWSKYA*LERSLSETDRARSIFELAI 110
R RK +E + W KYA E SL E RARSI+E A+
Sbjct: 214 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERAL 257
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,731,599
Number of Sequences: 2540612
Number of extensions: 7026325
Number of successful extensions: 20900
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 19838
Number of HSP's gapped (non-prelim): 776
length of query: 128
length of database: 863,360,394
effective HSP length: 104
effective length of query: 24
effective length of database: 599,136,746
effective search space: 14379281904
effective search space used: 14379281904
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0060.17