BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0055.8
(509 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65269.1| unknown [Arabidopsis thaliana] 592 e-167
gb|AAM91464.1| AT5g14050/MUA22_5 [Arabidopsis thaliana] gi|97577... 592 e-167
ref|XP_479071.1| putative WD repeat protein [Oryza sativa (japon... 551 e-155
gb|AAH97862.1| Unknown (protein for MGC:115621) [Xenopus laevis] 280 8e-74
ref|NP_001016635.1| hypothetical protein LOC549389 [Xenopus trop... 274 4e-72
ref|XP_220851.3| PREDICTED: similar to novel protein (6230425C22... 255 2e-66
ref|XP_548208.1| PREDICTED: similar to WD-repeat protein CGI-48 ... 253 1e-65
gb|AAH25276.2| WDR50 protein [Homo sapiens] 252 2e-65
gb|AAD34043.1| CGI-48 protein [Homo sapiens] gi|7705765|ref|NP_0... 252 2e-65
sp|Q9Y5J1|WDR50_HUMAN WD-repeat protein 50 252 2e-65
emb|CAI25710.1| novel protein (6230425C22Rik) similar to Homo sa... 247 7e-64
emb|CAA18383.1| SPBC29A3.06 [Schizosaccharomyces pombe] gi|19112... 236 1e-60
gb|AAG01999.1| similar to Homo sapiens CGI-48 protein mRNA with ... 234 4e-60
gb|EAK96172.1| hypothetical protein CaO19.7154 [Candida albicans... 227 8e-58
emb|CAG78910.1| unnamed protein product [Yarrowia lipolytica CLI... 223 1e-56
emb|CAF95617.1| unnamed protein product [Tetraodon nigroviridis] 222 2e-56
emb|CAG89438.1| unnamed protein product [Debaryomyces hansenii C... 221 6e-56
gb|EAL87684.1| small nucleolar ribonucleoprotein complex subunit... 200 1e-49
dbj|BAC37104.1| unnamed protein product [Mus musculus] 199 2e-49
ref|XP_415643.1| PREDICTED: similar to WD-repeat protein CGI-48 ... 195 3e-48
>gb|AAM65269.1| unknown [Arabidopsis thaliana]
Length = 546
Score = 592 bits (1525), Expect = e-167
Identities = 312/501 (62%), Positives = 391/501 (77%), Gaps = 23/501 (4%)
Query: 12 KIEEKEVVDREE-NSDVDTVKSKKRKRDRKREEHVVDMVEQVREMRKLESFLFGSLYSPL 70
K + ++V D EE SD D + K+RK ++++++ ++ E V EM+KLE+ +FGSLYSP+
Sbjct: 19 KKQYEDVEDEEEIGSDDDLTRGKRRKTEKEKQK--LEESELV-EMKKLENLIFGSLYSPV 75
Query: 71 ESGKEVDGEVEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGDDGL-----GRKPAWVDE 125
GKE E + S LF DRSA + ++DG+ + D ++G + AW DE
Sbjct: 76 TFGKEE--EEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDE 133
Query: 126 EEEKFTVNIAKVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWAQLDSRLKLDR 185
EE++ V+IA VNRLRKLRK+E+E ISGSEY+ARLRAHH KLN GTDWA+ DS++
Sbjct: 134 EEKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQI---- 189
Query: 186 SDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANS-SSKLLPGHLEYSRLVDANIQDP 244
DGE +DD++ + G VDDILRTNEDLV S +KL G LEYS+LVDAN DP
Sbjct: 190 --VDGESSDDDD---TQDG--GVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAADP 242
Query: 245 SNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQ 304
SNGP+NSV FH+NAQLLLTAGLD++LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+GSQ
Sbjct: 243 SNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQ 302
Query: 305 VILSGRRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVST 364
VI+SGRRKFFYSFDL K +KIGPLVGREEKSLE FE+S DS IAFVGNEGYILLVST
Sbjct: 303 VIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVST 362
Query: 365 KTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTA 424
KTK+L+G+LKM+G+ RSLAFSEDG+ LLS+GGDGQVY WDLRT C++KGVDEG T+
Sbjct: 363 KTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTS 422
Query: 425 LCTSPSGTLFAAGSDSGIVNVYNREDFLGGKRKPIKTIENLITKVDFMRFNHDSQILAIC 484
LC+S +G LFA+G+D GIVN+Y + +F+GGKRKPIKT++NL +K+DFM+FNHD+QILAI
Sbjct: 423 LCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAIV 482
Query: 485 SSMKKSSLKLIHIPSYTVFSN 505
S+M K+S+KL+H+PS TVFSN
Sbjct: 483 STMNKNSVKLVHVPSLTVFSN 503
>gb|AAM91464.1| AT5g14050/MUA22_5 [Arabidopsis thaliana] gi|9757786|dbj|BAB08284.1|
unnamed protein product [Arabidopsis thaliana]
gi|18700147|gb|AAL77685.1| AT5g14050/MUA22_5
[Arabidopsis thaliana] gi|15241293|ref|NP_196909.1|
transducin family protein / WD-40 repeat family protein
[Arabidopsis thaliana] gi|17366762|sp|Q9FMU5|WDR50_ARATH
WD-repeat protein At5g14050
Length = 546
Score = 592 bits (1525), Expect = e-167
Identities = 312/501 (62%), Positives = 391/501 (77%), Gaps = 23/501 (4%)
Query: 12 KIEEKEVVDREE-NSDVDTVKSKKRKRDRKREEHVVDMVEQVREMRKLESFLFGSLYSPL 70
K + ++V D EE SD D + K+RK ++++++ ++ E V EM+KLE+ +FGSLYSP+
Sbjct: 19 KKQYEDVEDEEEIGSDDDLTRGKRRKTEKEKQK--LEESELV-EMKKLENLIFGSLYSPV 75
Query: 71 ESGKEVDGEVEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGDDGL-----GRKPAWVDE 125
GKE E + S LF DRSA + ++DG+ + D ++G + AW DE
Sbjct: 76 TFGKEE--EEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDE 133
Query: 126 EEEKFTVNIAKVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWAQLDSRLKLDR 185
EE++ V+IA VNRLRKLRK+E+E ISGSEY+ARLRAHH KLN GTDWA+ DS++
Sbjct: 134 EEKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQI---- 189
Query: 186 SDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANS-SSKLLPGHLEYSRLVDANIQDP 244
DGE +DD++ + G VDDILRTNEDLV S +KL G LEYS+LVDAN DP
Sbjct: 190 --VDGESSDDDD---TQDG--GVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAADP 242
Query: 245 SNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQ 304
SNGP+NSV FH+NAQLLLTAGLD++LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+GSQ
Sbjct: 243 SNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQ 302
Query: 305 VILSGRRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVST 364
VI+SGRRKFFYSFDL K +KIGPLVGREEKSLE FE+S DS IAFVGNEGYILLVST
Sbjct: 303 VIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVST 362
Query: 365 KTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTA 424
KTK+L+G+LKM+G+ RSLAFSEDG+ LLS+GGDGQVY WDLRT C++KGVDEG T+
Sbjct: 363 KTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTS 422
Query: 425 LCTSPSGTLFAAGSDSGIVNVYNREDFLGGKRKPIKTIENLITKVDFMRFNHDSQILAIC 484
LC+S +G LFA+G+D GIVN+Y + +F+GGKRKPIKT++NL +K+DFM+FNHD+QILAI
Sbjct: 423 LCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAIV 482
Query: 485 SSMKKSSLKLIHIPSYTVFSN 505
S+M K+S+KL+H+PS TVFSN
Sbjct: 483 STMNKNSVKLVHVPSLTVFSN 503
>ref|XP_479071.1| putative WD repeat protein [Oryza sativa (japonica cultivar-group)]
gi|34394923|dbj|BAC84475.1| putative WD repeat protein
[Oryza sativa (japonica cultivar-group)]
gi|50509679|dbj|BAD31716.1| putative WD repeat protein
[Oryza sativa (japonica cultivar-group)]
Length = 557
Score = 551 bits (1420), Expect = e-155
Identities = 302/529 (57%), Positives = 378/529 (71%), Gaps = 40/529 (7%)
Query: 2 MSLISQNARPKIEEKEVVDREENSDV-------------DTVKSKKRKRDRKREE-HVVD 47
MSLISQN K E ++ +++SD + KS+KRK+++KR++ ++
Sbjct: 1 MSLISQNPIQK-RRLETIEADDDSDEGLGSPVAAGAEDGNETKSEKRKKEKKRKKAKALE 59
Query: 48 MVEQVR-----EMRKLESFLFGSLYSPLESGKEVDGEVEPSD---LFFTDRSA---DSVL 96
+E+ EM+ LES LFG+LY+P + G EV+ V+P FF DRS + L
Sbjct: 60 ALEEKENKEREEMKLLESSLFGALYAPPQFGTEVEA-VDPDKGVPSFFMDRSGGDGEDDL 118
Query: 97 SVCDEDGEFSDGSGDGDDGLGRKPAWVDEEEEKFTVNIAKVNRLRKLRKDEDESFISGSE 156
V DE G S+ G G RKPAWVDEEE V+I+KV RLRKLRK+ DE ISG E
Sbjct: 119 PVYDE-GLSSEDEGVDMVGRERKPAWVDEEEVT-EVDISKVARLRKLRKEGDERVISGKE 176
Query: 157 YVARLRAHHVKLNRGTDWAQLDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDILRTNE 216
Y ARLR H KLNR WA LD + L S +D+E++ R VDDILR N+
Sbjct: 177 YEARLRGQHAKLNRFAGWADLDRKAPLPGS------SDNESDEEGR-----VDDILRNND 225
Query: 217 DLVANSSSKLLPGHLEYSRLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQID 276
+LV ++KLLP L +SRLVDAN Q+PS+GP+NSVQFHRN QL+L AGLD+ LRFFQID
Sbjct: 226 ELVVKDNAKLLPDMLGFSRLVDANSQEPSSGPINSVQFHRNGQLMLVAGLDKHLRFFQID 285
Query: 277 GKRNTKIQSIFLEDCPIRKASFLPDGSQVILSGRRKFFYSFDLVKGTLEKIGPLVGREEK 336
GKRN KIQSIF+EDCP+ KA+FLPDGS+VILSGRRKFFYSFDLV + KIGPL GREEK
Sbjct: 286 GKRNPKIQSIFIEDCPVHKAAFLPDGSEVILSGRRKFFYSFDLVNAAVSKIGPLTGREEK 345
Query: 337 SLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGG 396
SLE FE+S DS+ IAF+GNEGYILL+S+KTKQL+G+LKM+G RSLAF++ G +LLS+GG
Sbjct: 346 SLEHFEISPDSKTIAFIGNEGYILLISSKTKQLIGTLKMNGNVRSLAFADGGNQLLSSGG 405
Query: 397 DGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDSGIVNVYNREDFLGGKR 456
DG VYHWDLRTR CIHKG DEG + +LCTSP +LFA GS SGIVNVY R+DFLGGKR
Sbjct: 406 DGHVYHWDLRTRKCIHKGTDEGSLAGISLCTSPDSSLFATGSTSGIVNVYKRDDFLGGKR 465
Query: 457 KPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
KP+KTIENL T++ M+FNHD+Q+LAI S +++ ++L+H+PS TVF N
Sbjct: 466 KPLKTIENLTTEIGEMKFNHDAQVLAISSRKERNGMRLVHVPSLTVFQN 514
>gb|AAH97862.1| Unknown (protein for MGC:115621) [Xenopus laevis]
Length = 521
Score = 280 bits (716), Expect = 8e-74
Identities = 176/501 (35%), Positives = 268/501 (53%), Gaps = 45/501 (8%)
Query: 22 EENSDVDTVKSKKRKRDRKREE-------------HVVDMVEQVREMRKLESFLFGSLYS 68
E ++ KKR+RD+ E+ H+ + ++ LE F+FG
Sbjct: 5 ENTNESKNASYKKRQRDKSPEQDQNLREEEELRAKHLKALADKPETEMILEEFIFG---- 60
Query: 69 PLESGKEVDGEVEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGDDGLGRKPAWVDEEEE 128
GE E + A +S + + + + L RKPAWVDEE+E
Sbjct: 61 ---------GEDELVERLIGHSKARHTVSGDLLESDSEEETSKNAAPLARKPAWVDEEDE 111
Query: 129 KFTVNIAKVNRLRK-LRKDEDESFISGSEYVARLRAHHVKLNRGT-DWAQLDSRLKLDRS 186
N+ +R RK + K + E ++ + RL+ K G WA D + + +
Sbjct: 112 D-EENVEMTHRYRKDMMKSKSEKILTKEKLQTRLQEQFQKAMGGVPSWACQDRKKRQSKE 170
Query: 187 DYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSRLVDANIQDPSN 246
D D E EN D++L +L+A SS L G ++ + ++AN + S
Sbjct: 171 DEDSE-------------EENEDNLLSKTGNLLAQSSY-LPKGIIQIRQCLNANNERMSP 216
Query: 247 GPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVI 306
P+ +VQFH AQ+++TAG D+ + FQ+DGKRN KIQSI LE PI KA F DG QVI
Sbjct: 217 VPLTTVQFHPLAQVVMTAGFDRSVSLFQVDGKRNQKIQSIHLEKFPIYKAQFSADGEQVI 276
Query: 307 LSG-RRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVSTK 365
+G R K FY +D++ G + + + G EEK+++ FE+S D ++ G+ GY+ L+S K
Sbjct: 277 ATGLRSKMFYIYDMMGGNIIPVPRIRGLEEKAIQQFEVSPDGSILLLNGSAGYLHLLSMK 336
Query: 366 TKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTAL 425
TK+L+GS+KM+G + FS D KL S DG VY WD+++R C++K D+G I T++
Sbjct: 337 TKELIGSMKMNGKSVKAVFSSDSSKLFSNSDDGFVYVWDVKSRRCLNKFTDDGSICGTSI 396
Query: 426 CTSPSGTLFAAGSDSGIVNVYNREDFLGGKR-KPIKTIENLITKVDFMRFNHDSQILAIC 484
S G + GS+SG+VNVYN ED L KP+K + NL+T + FN +++LA+
Sbjct: 397 ALSRDGRYVSCGSNSGVVNVYNHEDCLQQTNPKPLKALMNLVTTASSLIFNPQTELLAVA 456
Query: 485 SSMKKSSLKLIHIPSYTVFSN 505
S+ ++KL+HIPS++VFSN
Sbjct: 457 SNKTDDAVKLVHIPSFSVFSN 477
>ref|NP_001016635.1| hypothetical protein LOC549389 [Xenopus tropicalis]
Length = 492
Score = 274 bits (701), Expect = 4e-72
Identities = 168/475 (35%), Positives = 262/475 (54%), Gaps = 32/475 (6%)
Query: 35 RKRDRKREEHVVDMVEQVREMRKLESFLFGSLYSPLESGKEVDGEVEPSDLFFTDRSADS 94
++ + R +H+ + ++ LE +FG GE E + A
Sbjct: 2 KEEEELRTKHLKALADKPETDTILEELVFG-------------GEDEFVEKLIGHSKARH 48
Query: 95 VLSVCDEDGEFSDGSGDGDDGLGRKPAWVDEEEEKFTVNIAKVNRLRK-LRKDEDESFIS 153
+S + + + + + L RKPAWVDEE+E NI +R RK + K + E+ +S
Sbjct: 49 TVSGDLLESDSEEETSENAAPLARKPAWVDEEDEH-EENIEMTHRYRKDIMKSKTETALS 107
Query: 154 GSEYVARLRAHHVKLNRGT-DWAQLDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDIL 212
+ ARL+ K G WA S+ ++ + D + E EN D++L
Sbjct: 108 KEKLQARLQEQFQKAMGGVPSWACQGSKKRISKEDEESE-------------EENDDNLL 154
Query: 213 RTNEDLVANSSSKLLPGHLEYSRLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRF 272
+L++ SS L G ++ + ++AN + S P+ +VQFH AQ+++TAG D+ +
Sbjct: 155 SKTGNLLSQSSY-LSKGVIQIRKCINANHERLSRVPLTTVQFHPLAQVVMTAGFDRSVSL 213
Query: 273 FQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVILSG-RRKFFYSFDLVKGTLEKIGPLV 331
FQ+DGKRN KIQSI LE PI KA F DG QVI +G R K FY +D++ G + + +
Sbjct: 214 FQVDGKRNQKIQSIHLEKFPIYKAQFSADGEQVIATGLRSKMFYIYDMMGGNIITVPRIR 273
Query: 332 GREEKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKL 391
G EE+ ++ FE+S + + G+ GY+ L+S KTK+L+GS+KM+G + FS D K+
Sbjct: 274 GLEERVIQQFEVSPNGSFLLLNGSAGYLHLLSMKTKELIGSMKMNGKSMKAVFSPDSSKV 333
Query: 392 LSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDSGIVNVYNREDF 451
S DG VY WD+R+R C++K DEG I T++ S G + GS+SG+VN+YN ED
Sbjct: 334 FSNSDDGFVYVWDVRSRQCLNKFTDEGSICGTSIALSRDGRYISCGSNSGVVNIYNHEDC 393
Query: 452 LGGKR-KPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
L +P+K I NL+T + FN ++I+A+ S+ ++KL+HIPS++VFSN
Sbjct: 394 LQQTNPRPLKAIMNLVTSASSIIFNPQTEIMAVASNKTDDAVKLVHIPSFSVFSN 448
>ref|XP_220851.3| PREDICTED: similar to novel protein (6230425C22Rik) similar to Homo
sapiens CGI-48 protein [Rattus norvegicus]
Length = 639
Score = 255 bits (652), Expect = 2e-66
Identities = 166/483 (34%), Positives = 261/483 (53%), Gaps = 39/483 (8%)
Query: 31 KSKKRKRDRKREEHVVDMVEQVREMRKLESFLFGSLYSPLESGKEVDGEVEPSDLFFTDR 90
+S+ R+R+R E+ E R LE +FG D E + L R
Sbjct: 152 ESRLRQRNRLMLENDKPAAE-----RCLEQLVFG------------DVEDDEDALLRRLR 194
Query: 91 SADSVLSVCDEDGEFSDGSGDGDDGLGRKPAWVDEEEEKFTVNIAKVNRLRK-LRKDEDE 149
S+ L +D E D + D +KP WVDE++E + NR RK + K+ E
Sbjct: 195 SSRGHLHGSSDDSEVEDEAVDNLSQ--KKPVWVDEDDEDEEIVDMMNNRFRKDMMKNASE 252
Query: 150 SFISGSEYVARLRAHHVKLNRGT-DWAQLDSRLKLDRSDYDGELTDDENEAVVRRGYENV 208
S +S + RL+ G DWA+ S+ K +DDE+E E+
Sbjct: 253 SKLSKDKLQKRLKEEFQHAMGGVPDWAEPGSKRKTS--------SDDESE-------EDE 297
Query: 209 DDILRTNEDLVANSSSKLLPGHLEYSRLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQ 268
DD+L+ + ++ S+S L G L+ AN + P+ ++SVQFH AQ+++ +G+D
Sbjct: 298 DDLLQRTGNFISTSTS-LPRGILKMKNCRPANAERPTTARISSVQFHPGAQVVMVSGVDH 356
Query: 269 KLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVILSGRR-KFFYSFDLVKGTLEKI 327
+ FQ+DGK N KIQSI+LE PI KA F +G +V+ + K Y +D++ G L +
Sbjct: 357 AISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSKVIYVYDMIAGKLIPV 416
Query: 328 GPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSED 387
+ G +EK ++ FE+S D + G G+ L+S KTK+L+GS+K++G + FS D
Sbjct: 417 HQVRGLKEKIVKRFEVSPDGSFLLISGIAGFSHLLSMKTKELIGSMKINGRISASTFSSD 476
Query: 388 GQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDSGIVNVYN 447
+++ ++ G+G+VY WD+ +R CI++ +DEG + ++ S +G A GS SG+VN+YN
Sbjct: 477 SKRIYTSSGNGEVYVWDVNSRKCINRFLDEGSLYGLSIAASKNGQYVACGSKSGVVNIYN 536
Query: 448 REDFLGGKR-KPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSNS 506
++ L KPIK I NL+T V + FN ++ILA+ S K +++L+H+PS TVFSN
Sbjct: 537 QDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKEAVRLVHLPSCTVFSNF 596
Query: 507 SQY 509
Y
Sbjct: 597 PVY 599
>ref|XP_548208.1| PREDICTED: similar to WD-repeat protein CGI-48 [Canis familiaris]
Length = 608
Score = 253 bits (646), Expect = 1e-65
Identities = 165/506 (32%), Positives = 267/506 (52%), Gaps = 25/506 (4%)
Query: 7 QNARPKIEEKEVVDREENSDVDTVKSKKRKRDRKREEHVVDMVEQVREMRKLESFLFGSL 66
+ A P + K + V +++ +R R+R ++ + E R LE +FG +
Sbjct: 40 RKAAPSSQRKPPARPSAAAAAIAVAAEEERRLRQRNRLALEEDKPAVE-RCLEELVFGDV 98
Query: 67 YSPLESG-KEVDGEVEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGDDGL--GRKPAWV 123
++ + + G S L T ED + S+ + D +KP WV
Sbjct: 99 EDDEDALLRRLQGSRHVSFLSVTVGPTYLSSVQAQEDSDDSEAEKEPKDNFLFQKKPVWV 158
Query: 124 DEEEEKFTVNIAKVNRLRK-LRKDEDESFISGSEYVARLRAHHVKLNRGTD-WAQLDSRL 181
DEE+E + NR RK + K+ ES +S + RL+ G WA+ + +
Sbjct: 159 DEEDEDDEMVDMMNNRFRKDMMKNTGESQLSKDKLQKRLKEEFQHAMGGVPAWAETNKQ- 217
Query: 182 KLDRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSRLVDANI 241
++ D E +DE DD+L+ + ++ S+S L G L+ AN
Sbjct: 218 ---KTSLDDESEEDE------------DDLLQRTGNFISTSTS-LPKGILKIKNCQHANA 261
Query: 242 QDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPD 301
+ P+ ++SVQFH AQ+++ A LD + FQ+DG+ N KIQSI+LE PI KA F +
Sbjct: 262 ERPTTARISSVQFHPRAQVVMVAALDNAVSLFQVDGRTNPKIQSIYLEKFPIYKACFSAN 321
Query: 302 GSQVILSG-RRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYIL 360
G +V+ + K Y +D++ G L + + G +EK + FE+S D + G GY+
Sbjct: 322 GEEVLATSIHSKVLYVYDMLAGKLIPVHQVRGLKEKLVRSFEVSPDGSFLLINGVAGYLH 381
Query: 361 LVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCI 420
L+S KTK+L+GS+K++G + FS D +K+ ++ GDG+VY WD+ +R C+++ VDEG +
Sbjct: 382 LLSMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRKCLNRFVDEGSL 441
Query: 421 NSTALCTSPSGTLFAAGSDSGIVNVYNREDFLGGKR-KPIKTIENLITKVDFMRFNHDSQ 479
++ TS +G A GS+ G+VN+YN++ L KP+K I NL+T V + FN ++
Sbjct: 442 YGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPVKAIMNLVTGVTSLTFNPTTE 501
Query: 480 ILAICSSMKKSSLKLIHIPSYTVFSN 505
ILAI S K +++L+H+PS TVFSN
Sbjct: 502 ILAIASEEMKEAVRLVHLPSCTVFSN 527
>gb|AAH25276.2| WDR50 protein [Homo sapiens]
Length = 556
Score = 252 bits (644), Expect = 2e-65
Identities = 149/392 (38%), Positives = 226/392 (57%), Gaps = 21/392 (5%)
Query: 118 RKPAWVDEEEEKFTVNIAKVNRLRK-LRKDEDESFISGSEYVARLRAHHVKLNRGTD-WA 175
+KP WVDEE+E + NR RK + K+ ES +S RL+ G WA
Sbjct: 138 KKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEEFQHAMGGVPAWA 197
Query: 176 QLDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSR 235
+ R +DDE+E E+ DD+L+ + ++ S+S L G L+
Sbjct: 198 ETTKRKTS---------SDDESE-------EDEDDLLQRTGNFISTSTS-LPRGILKMKN 240
Query: 236 LVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRK 295
AN + P+ ++SVQFH AQ+++ AGLD + FQ+DGK N KIQSI+LE PI K
Sbjct: 241 CQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTNPKIQSIYLERFPIFK 300
Query: 296 ASFLPDGSQVIL-SGRRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVG 354
A F +G +V+ S K Y +D++ G L + + G +EK + FE+S D + G
Sbjct: 301 ACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLING 360
Query: 355 NEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKG 414
GY+ L++ KTK+L+GS+K++G + FS D +K+ ++ GDG+VY WD+ +R C+++
Sbjct: 361 IAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRKCLNRF 420
Query: 415 VDEGCINSTALCTSPSGTLFAAGSDSGIVNVYNREDFLGGKR-KPIKTIENLITKVDFMR 473
VDEG + ++ TS +G A GS+ G+VN+YN++ L KPIK I NL+T V +
Sbjct: 421 VDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLT 480
Query: 474 FNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
FN ++ILAI S K +++L+H+PS TVFSN
Sbjct: 481 FNPTTEILAIASEKMKEAVRLVHLPSCTVFSN 512
>gb|AAD34043.1| CGI-48 protein [Homo sapiens] gi|7705765|ref|NP_057085.1| WD repeat
domain 50 [Homo sapiens]
Length = 521
Score = 252 bits (644), Expect = 2e-65
Identities = 149/392 (38%), Positives = 226/392 (57%), Gaps = 21/392 (5%)
Query: 118 RKPAWVDEEEEKFTVNIAKVNRLRK-LRKDEDESFISGSEYVARLRAHHVKLNRGTD-WA 175
+KP WVDEE+E + NR RK + K+ ES +S RL+ G WA
Sbjct: 114 KKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEEFQHAMGGVPAWA 173
Query: 176 QLDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSR 235
+ R +DDE+E E+ DD+L+ + ++ S+S L G L+
Sbjct: 174 ETTKRKTS---------SDDESE-------EDEDDLLQRTGNFISTSTS-LPRGILKMKN 216
Query: 236 LVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRK 295
AN + P+ ++SVQFH AQ+++ AGLD + FQ+DGK N KIQSI+LE PI K
Sbjct: 217 CQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTNPKIQSIYLERFPIFK 276
Query: 296 ASFLPDGSQVIL-SGRRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVG 354
A F +G +V+ S K Y +D++ G L + + G +EK + FE+S D + G
Sbjct: 277 ACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLING 336
Query: 355 NEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKG 414
GY+ L++ KTK+L+GS+K++G + FS D +K+ ++ GDG+VY WD+ +R C+++
Sbjct: 337 IAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRKCLNRF 396
Query: 415 VDEGCINSTALCTSPSGTLFAAGSDSGIVNVYNREDFLGGKR-KPIKTIENLITKVDFMR 473
VDEG + ++ TS +G A GS+ G+VN+YN++ L KPIK I NL+T V +
Sbjct: 397 VDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLT 456
Query: 474 FNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
FN ++ILAI S K +++L+H+PS TVFSN
Sbjct: 457 FNPTTEILAIASEKMKEAVRLVHLPSCTVFSN 488
>sp|Q9Y5J1|WDR50_HUMAN WD-repeat protein 50
Length = 532
Score = 252 bits (644), Expect = 2e-65
Identities = 149/392 (38%), Positives = 226/392 (57%), Gaps = 21/392 (5%)
Query: 118 RKPAWVDEEEEKFTVNIAKVNRLRK-LRKDEDESFISGSEYVARLRAHHVKLNRGTD-WA 175
+KP WVDEE+E + NR RK + K+ ES +S RL+ G WA
Sbjct: 114 KKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEEFQHAMGGVPAWA 173
Query: 176 QLDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSR 235
+ R +DDE+E E+ DD+L+ + ++ S+S L G L+
Sbjct: 174 ETTKRKTS---------SDDESE-------EDEDDLLQRTGNFISTSTS-LPRGILKMKN 216
Query: 236 LVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRK 295
AN + P+ ++SVQFH AQ+++ AGLD + FQ+DGK N KIQSI+LE PI K
Sbjct: 217 CQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTNPKIQSIYLERFPIFK 276
Query: 296 ASFLPDGSQVIL-SGRRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVG 354
A F +G +V+ S K Y +D++ G L + + G +EK + FE+S D + G
Sbjct: 277 ACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLING 336
Query: 355 NEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKG 414
GY+ L++ KTK+L+GS+K++G + FS D +K+ ++ GDG+VY WD+ +R C+++
Sbjct: 337 IAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRKCLNRF 396
Query: 415 VDEGCINSTALCTSPSGTLFAAGSDSGIVNVYNREDFLGGKR-KPIKTIENLITKVDFMR 473
VDEG + ++ TS +G A GS+ G+VN+YN++ L KPIK I NL+T V +
Sbjct: 397 VDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLT 456
Query: 474 FNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
FN ++ILAI S K +++L+H+PS TVFSN
Sbjct: 457 FNPTTEILAIASEKMKEAVRLVHLPSCTVFSN 488
>emb|CAI25710.1| novel protein (6230425C22Rik) similar to Homo sapiens CGI-48
protein [Mus musculus] gi|61656180|ref|NP_001013393.1|
WD repeat domain 50 [Mus musculus]
gi|63617720|ref|XP_618917.1| PREDICTED: WD repeat domain
50 [Mus musculus] gi|60390866|sp|Q5SSI6|WDR50_MOUSE
WD-repeat protein 50
Length = 552
Score = 247 bits (630), Expect = 7e-64
Identities = 159/479 (33%), Positives = 258/479 (53%), Gaps = 37/479 (7%)
Query: 31 KSKKRKRDRKREEHVVDMVEQVREMRKLESFLFGSLYSPLESGKEVDGEVEPSDLFFTDR 90
+S+ R+R+R E E R LE +FG D E + L R
Sbjct: 63 ESRLRQRNRLTLEDDKPAAE-----RCLEQLVFG------------DVEDDEDALLQRLR 105
Query: 91 SADSVLSVCDEDGEFSDGSGDGDDGLGRKPAWVDEEEEKFTVNIAKVNRLRK-LRKDEDE 149
S+ L ++ E + + D ++P WVDE++E + NR RK + K+ E
Sbjct: 106 SSRGQLHGSSDESEVENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNNRFRKDIMKNASE 165
Query: 150 SFISGSEYVARLRAHHVKLNRGT-DWAQLDSRLKLDRSDYDGELTDDENEAVVRRGYENV 208
S +S + RL+ G DWA+ S+ + +DDE+E E+
Sbjct: 166 SKLSKDKLQKRLKEEFQHAMGGVPDWAEAGSKRRTS--------SDDESE-------EDE 210
Query: 209 DDILRTNEDLVANSSSKLLPGHLEYSRLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQ 268
DD+L+ + ++ S+S L G L+ AN + P+ ++SVQFH AQ+++ +G+D
Sbjct: 211 DDLLQRTGNFISTSTS-LPRGILKMKNCRPANAERPTTARISSVQFHPGAQVVMVSGVDN 269
Query: 269 KLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVILSGRR-KFFYSFDLVKGTLEKI 327
+ FQ+DGK N KIQSI+LE PI KA F +G +V+ + K Y +D++ G L +
Sbjct: 270 AISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSKVLYVYDMLAGKLIPV 329
Query: 328 GPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSED 387
+ G +EK+++ FE+S D + G G+ L+S KTK+L+GS+K++G + FS D
Sbjct: 330 HQVRGLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELIGSMKINGRIAASTFSSD 389
Query: 388 GQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDSGIVNVYN 447
+++ + +G+VY WD+ +R C+++ +DEG + ++ S +G A GS SG+VN+YN
Sbjct: 390 SKRIYTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKNGQYVACGSKSGVVNIYN 449
Query: 448 REDFLGGKR-KPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
++ L KPIK I NL+T V + FN ++ILA+ S K +++L+H+PS TVFSN
Sbjct: 450 QDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKEAVRLVHLPSCTVFSN 508
>emb|CAA18383.1| SPBC29A3.06 [Schizosaccharomyces pombe]
gi|19112626|ref|NP_595834.1| hypothetical protein
SPBC29A3.06 [Schizosaccharomyces pombe 972h-]
gi|17366384|sp|P78750|UTP18_SCHPO Probable U3 small
nucleolar RNA-associated protein 18 (U3
snoRNA-associated protein 18)
Length = 556
Score = 236 bits (603), Expect = 1e-60
Identities = 136/433 (31%), Positives = 232/433 (53%), Gaps = 14/433 (3%)
Query: 79 EVEPSDLFFTDR-SADSVLSVCDEDGEFSDGSGDGDDGLGRK--PAWVDEEEEKFTVNIA 135
++E ++LF D SAD D D + D+ + W D ++E+ +++
Sbjct: 55 KLEDAELFMFDTGSADGAKDSVPLDIIAGDNTVKEDEEASNEIPSIWEDSDDERLMISLQ 114
Query: 136 KVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWAQLDSRLKLDRSDYDGELTDD 195
+RLRKLR+ EDE ++G +Y RLR ++ +WA+ K D ++ + E
Sbjct: 115 DHSRLRKLRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAK-----KQDVTEEEDEFNAL 169
Query: 196 ENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSRLVDANIQDPSNGPVNSVQFH 255
++V+ + ++ + +++ + SS L PG + RL DAN Q PS+ + + H
Sbjct: 170 SEKSVIPKSLKS---LFKSSVSYINQSSKLLAPGTINIKRLKDANFQAPSHSGIRCMSIH 226
Query: 256 RNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVILSGRRKFFY 315
LLLT G D+ LR +Q+DGK N + S+ L ++ A F PDG +VI +GRRK+ Y
Sbjct: 227 PYFPLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMY 286
Query: 316 SFDLVKGTLEKIGPLVGRE--EKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSL 373
+DL ++K+ + G+E + S+E F + + IA G G+I L+ T Q S
Sbjct: 287 IWDLESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSF 346
Query: 374 KMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTL 433
K+ G + F+ DG ++L +V+H+++ R+ + + + +++T C PS
Sbjct: 347 KIEGVLSDVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLDPSNKY 406
Query: 434 FAAGSDSGIVNVYN-REDFLGGKRKPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSL 492
A GS SGIVN+Y+ + KP+ T++N+ ++ M F+ DSQ+LAI S KK +L
Sbjct: 407 LAIGSKSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTL 466
Query: 493 KLIHIPSYTVFSN 505
+L+H+PS++VF N
Sbjct: 467 RLVHVPSFSVFRN 479
>gb|AAG01999.1| similar to Homo sapiens CGI-48 protein mRNA with GenBank Accession
Number AF151806
Length = 393
Score = 234 bits (598), Expect = 4e-60
Identities = 137/366 (37%), Positives = 211/366 (57%), Gaps = 20/366 (5%)
Query: 143 LRKDEDESFISGSEYVARLRAHHVKLNRGTD-WAQLDSRLKLDRSDYDGELTDDENEAVV 201
+ K+ ES +S RL+ G WA+ R +DDE+E
Sbjct: 1 MMKNASESKLSKDNLKKRLKEEFQHAMGGVPAWAETTKRKTS---------SDDESE--- 48
Query: 202 RRGYENVDDILRTNEDLVANSSSKLLPGHLEYSRLVDANIQDPSNGPVNSVQFHRNAQLL 261
E+ DD+L+ + ++ S+S L G L+ AN + P+ ++SVQFH AQ++
Sbjct: 49 ----EDEDDLLQRTGNFISTSTS-LPRGILKMKNCQHANAERPTVARISSVQFHPGAQIV 103
Query: 262 LTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIL-SGRRKFFYSFDLV 320
+ AGLD + FQ+DGK N KIQSI+LE PI KA F +G +V+ S K Y +D++
Sbjct: 104 MVAGLDNAVSLFQVDGKTNPKIQSIYLERFPIFKACFSANGEEVLATSTHSKVLYVYDML 163
Query: 321 KGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSLKMSGTTR 380
G L + + G +EK + FE+S D + G GY+ L++ KTK+L+GS+K++G
Sbjct: 164 AGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLINGIAGYLHLLAMKTKELIGSMKINGRVA 223
Query: 381 SLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDS 440
+ FS D +K+ ++ GDG+VY WD+ +R C+++ VDEG + ++ TS +G A GS+
Sbjct: 224 ASTFSSDSKKVYASSGDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNC 283
Query: 441 GIVNVYNREDFLGGKR-KPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPS 499
G+VN+YN++ L KPIK I NL+T V + FN ++ILAI S K +++L+H+PS
Sbjct: 284 GVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPS 343
Query: 500 YTVFSN 505
TVFSN
Sbjct: 344 CTVFSN 349
>gb|EAK96172.1| hypothetical protein CaO19.7154 [Candida albicans SC5314]
Length = 552
Score = 227 bits (578), Expect = 8e-58
Identities = 149/460 (32%), Positives = 234/460 (50%), Gaps = 27/460 (5%)
Query: 71 ESGKEVDGEVEP---SDLFFTDRSADSVLSVCDE-DGEFSDGSGDGDDGLGRKPAWVDEE 126
E G E + ++E DLFF D + S D+ + + S+ +G+D AW D +
Sbjct: 55 EKGSEKESDIEDLQDEDLFFIDDGNNEEHSSGDDMEIDQSEDEEEGEDQ-DSDNAWEDSD 113
Query: 127 EEKFTVNIAKVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWAQLDSRLKLDRS 186
+EK +++ ++L+KLRK +S ISG Y+ RLR+ K+ W + D
Sbjct: 114 DEKVNISLLTSDKLKKLRKTPQDSVISGKSYIIRLRSQFEKIYPRPQWIEDIENNSDDEK 173
Query: 187 DYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGH-LEYSRLVDANIQDPS 245
D E D+ E V ++ IL + E + KL+ + + +RL DAN +
Sbjct: 174 DLSDEDKVDDEEGQVGSTTALLN-ILSSTEKFINTKQLKLIAANKISITRLKDANYKRIG 232
Query: 246 NGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPD---- 301
+ ++ FH N +LLT G D+ +R +QIDGK N I S FL++CPI +ASF P
Sbjct: 233 KSGIQTIDFHPNYPILLTGGFDKTIRIYQIDGKSNNFITSYFLKNCPIMEASFYPQLSGD 292
Query: 302 ----GSQVILSGRRKFFYSFDLVKGTLEKIGPLVGRE--EKSLEVFELSSDSQMIAFVGN 355
+ + SGRR++ +L G +EKI L G E +KS E F++S + I GN
Sbjct: 293 DTKTSNLIYASGRRRYMNKINLSTGEIEKISRLYGHEQTQKSFEYFKISPQGKYIGLTGN 352
Query: 356 EGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTR------- 408
G+ L++ +T V K+ GT AF+ D ++ G+V+ + L +
Sbjct: 353 NGWCNLLNAQTGHWVHGFKIEGTIVDFAFANDESFIMIVNSAGEVWEFALEGKITSKTPN 412
Query: 409 TCIHKGVDEGCINSTALCTSPSGTLFAA-GSDSGIVNVYNREDFLGGKR--KPIKTIENL 465
I + D+G + T L + A G+++GIVN+Y+R F KPIKT+ENL
Sbjct: 413 KIIRRWYDDGGVGITKLQIGGKNNRWVAIGNNNGIVNIYDRSVFAPETTHPKPIKTVENL 472
Query: 466 ITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
IT + + FN D Q+L I S K+ +L+L+H+PS +V+SN
Sbjct: 473 ITSISSLVFNPDGQLLCIASRAKRDALRLVHLPSGSVYSN 512
>emb|CAG78910.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50557378|ref|XP_506097.1| hypothetical protein
[Yarrowia lipolytica]
Length = 553
Score = 223 bits (568), Expect = 1e-56
Identities = 160/526 (30%), Positives = 255/526 (48%), Gaps = 58/526 (11%)
Query: 22 EENSDVDTVKSKKRKRDRKREEHVVDMVEQVREMRK-----LESFLFGSLYSPLESGKEV 76
E++ DVD+ ++ V D E+ E+ K LE F G LE +E
Sbjct: 2 EDSMDVDS-----------SDDEVPDKDEEELELEKAVFGDLEGFEMGIKNIALEEAEEE 50
Query: 77 DGE-------------VEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGD------DGLG 117
D + +E + LFF D D+ + SD S D D + G
Sbjct: 51 DSDDSHDSDDENDFNKMEDNQLFFVDGGDGQKYHSDDDSDDDSDSSMDSDTLDETLEEHG 110
Query: 118 RKPAWVDEEEEKFTVNIAKVN--RLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWA 175
+ AW D ++E +++ + L+KLRK + + +++G + RLR + K+ R DWA
Sbjct: 111 GRAAWADSDDENVHISLVGDHDGMLKKLRKTQTQDYVNGKVFSRRLREQYRKIYRVPDWA 170
Query: 176 Q--LDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLP-GHLE 232
++ K D + D E +D+E + V+ G + + R + +N SKLL G +E
Sbjct: 171 ANAFKAKAKKDYDEDDSEGSDEEEQDVLT-GTSLSEVLQRVTQ--YSNKESKLLRHGEIE 227
Query: 233 YSRLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCP 292
+RL D N PS V + FH LLLT G D+ LR +Q+DGK N + ++F+ P
Sbjct: 228 VARLQDVNFAAPSRAAVEGLAFHPTHSLLLTGGFDKTLRLYQVDGKNNPVVTTLFMRHTP 287
Query: 293 IRKASFLPDGSQVILSGRR-KFFYSFDLVKGTLEKIGPLVGREEK--SLEVFELSSDSQM 349
+F PDG +V GR+ K Y ++ G +E++ L G +K F+LS D +
Sbjct: 288 FAHVAFHPDGQRVYAGGRKQKHLYIWNAESGKVERMAHLYGHGDKVRCFAQFKLSPDGKY 347
Query: 350 IAFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRT 409
+ VG +G++ ++S + Q + K+ G F DG +++ GQV+ +++ +R+
Sbjct: 348 LCVVGVDGWLAILSATSGQWIDGCKIEGDVAD--FVWDGGSIIAVNTAGQVWEYNVESRS 405
Query: 410 CIHKGVDEGCINSTALCT-SPSGTLFAAGSDSGIVNVYNRE----DFLGGK-----RKPI 459
DEG + T L + A GS+SG VNVYNR + G+ +KP
Sbjct: 406 FTATWTDEGGVGITVLAIGGKANQWLAIGSESGYVNVYNRPKLALEIAKGQSPFVPQKPT 465
Query: 460 KTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
+ NL T V + F+ D Q+LA+ S K+ SLKL+H+PS+TVF N
Sbjct: 466 AVLSNLTTPVSSLVFSPDGQMLAMASDQKRDSLKLVHVPSFTVFKN 511
>emb|CAF95617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2025
Score = 222 bits (566), Expect = 2e-56
Identities = 140/413 (33%), Positives = 227/413 (54%), Gaps = 45/413 (10%)
Query: 118 RKPAWVDEEEE-KFTVNIAKVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTD-WA 175
RK WVDE++E + VN+ R R L + E ES ++ + R+R K G WA
Sbjct: 160 RKAVWVDEDDELEEEVNMRHRYR-RDLVRGEAESTMTKRKLQQRMREQFEKAMGGAPAWA 218
Query: 176 QLDSRLKLDRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGH-LEYS 234
+ + + T+DE E + DD+LR +LVA S LPG L+
Sbjct: 219 EGGVK----------KTTEDEGE-------DEDDDLLRRTGNLVA--SPDCLPGGVLKMK 259
Query: 235 RLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIR 294
R AN PS+ + SVQFHR+AQ+++TAGLD+ + FQ+DGK N KIQSI LE P+
Sbjct: 260 RCAHANAARPSDERLTSVQFHRSAQVVMTAGLDRCVSLFQVDGKTNPKIQSIHLEAFPVH 319
Query: 295 KASFLPDGSQVIL-SGRRKFFYSFDLVKGTLEKIGPLVGR-------------------- 333
+A F DG VI S + K FY +D+++G + + + G
Sbjct: 320 QARFSRDGEVVIATSPKNKMFYLYDMMEGRVTPVHAVRGEHATPTHGAAEANRASFCSGL 379
Query: 334 EEKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLS 393
+E+ + F + + + G GY+ L++ KT+++V S+K++G + FS DG + +
Sbjct: 380 KEERVRDFCVCPEGGALLLQGTNGYLHLLTLKTQEVVSSMKVNGDVSAATFSHDGAHIFA 439
Query: 394 AGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDSGIVNVYNREDFL- 452
+G VY WD+R+R C++ D+GC++ T++ S +G A GS +G+VN+Y++++ +
Sbjct: 440 HSDEGDVYVWDVRSRRCVNSFTDDGCVSGTSIAASLNGRHLACGSRAGVVNIYSQQECVT 499
Query: 453 GGKRKPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
KP++++ NL+T V + FN S+ILA S + +++L+H+PS +VFSN
Sbjct: 500 SANPKPLRSVMNLLTSVTSLTFNPSSEILAAASRAEDEAVRLVHLPSLSVFSN 552
Score = 99.4 bits (246), Expect = 2e-19
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 40/299 (13%)
Query: 245 SNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQS-----IFLEDCPIRKASFL 299
+ G ++S + +L G LR + D K+N ++ +++ED + +
Sbjct: 1057 ARGSMSSGELTAAESVLSLRGSSANLR--RTDVKKNKQVTGHKKARVYMEDVTLNPVTAY 1114
Query: 300 P------DGSQVILSGRRKFFYS----FDLVKGTLEKIGPLVGR--------EEKSLEVF 341
P D QV + +FF + FD+ + K G GR + K +V
Sbjct: 1115 PFLILSDDRKQVKRGEKLQFFRNSQQRFDVWSCVMAKEGFSSGRHYWEVFVGDSKDWKVG 1174
Query: 342 ELSSDSQ---MIAFVGNEGYILLVSTKTKQLVGSLKMSGTT---RSLAFSEDGQKLLSAG 395
++ +Q + GY L S + S ++S + SL ++ G +
Sbjct: 1175 VVTEAAQRKGLFDMTPASGYYALWSHRVSLSQTSQRVSPASPCPASLCWTGKGPSEVRQV 1234
Query: 396 G--------DGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPSGTLFAAGSDSGIVNVYN 447
G +G VY WD+R+R C++ D+GC++ T++ S +G A GS +G+VN+Y+
Sbjct: 1235 GVFLDMDEDEGDVYVWDVRSRRCVNSFTDDGCVSGTSIAASLNGRHLACGSRAGVVNIYS 1294
Query: 448 REDFL-GGKRKPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
+++ + KP++++ NL+T V + FN S+ILA S + +++L+H+PS +VFSN
Sbjct: 1295 QQECVTSANPKPLRSVMNLLTSVTSLTFNPSSEILAAASRAEDEAVRLVHLPSLSVFSN 1353
>emb|CAG89438.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50424941|ref|XP_461062.1| unnamed protein product
[Debaryomyces hansenii]
Length = 571
Score = 221 bits (562), Expect = 6e-56
Identities = 145/532 (27%), Positives = 251/532 (46%), Gaps = 51/532 (9%)
Query: 11 PKIEEKEVVDREENSDVDTVKSKKRKRDR-------KREEHVVDMVEQVREMRKLESFLF 63
PK EE+ ++++ D+ ++ +K D +++E D E + LE
Sbjct: 14 PKDEEEILLEKLVFGDLQGFETNLKKLDNLYDYSSDEQDEGSNDSDESSDDENDLEDVQD 73
Query: 64 GSLYSPLESGKEVDGEVEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGDDGLGRKPAWV 123
L+ + E G+ + D+ DED + D D +D + AW
Sbjct: 74 DQLFYIDDGTNEAQGDKDAMDI--------------DEDSQSDDEIDDEEDDNDSEIAWE 119
Query: 124 DEEEEKFTVNIAKVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWAQL--DSRL 181
D ++E+ +++ ++++KLRK E +S I+G Y+ RLR+ K+ +W
Sbjct: 120 DSDDERLNISLLSSDKMKKLRKVETDSTINGKSYITRLRSQFEKIYPKPEWVDKLQQEEN 179
Query: 182 KLDRSDYDGELTDDENEAVVRRGYENVDDILR----TNEDLVANSSSKLLPGHLEYSRLV 237
++ D D E+ +E+E + + + +L+ T + ++ + P + +RL
Sbjct: 180 DMEDEDSDAEVIGNEDEEITEASNNDNNAVLKLLSSTQQFIITKQLKLISPNKISITRLK 239
Query: 238 DANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKAS 297
DAN S + S+ FH + LLLT G D+ LR + IDGK N + ++ L + PI
Sbjct: 240 DANHSKLSKAAIQSLSFHHSHPLLLTGGFDRTLRIYHIDGKTNNVVTTLHLRNSPISSCY 299
Query: 298 FLPDGSQ-----VILSGRRKFFYSFDLVKGTLEKIGPLVGREE--KSLEVFELSSDSQMI 350
F P S+ + GRR++ +DL G +EKI + G E+ +S+E F++SS I
Sbjct: 300 FSPFPSKDNKNLIFAGGRRRYMNKWDLNTGEVEKISRMYGHEQFQRSMEYFKISSKGTYI 359
Query: 351 AFVGNEGYILLVSTKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTC 410
G+ G+ +++ T Q + K+ GT F+ D ++ G+V+ ++L
Sbjct: 360 GLTGSSGWCNILNGLTGQWIKGFKIEGTIVDFEFANDESFIIVINSAGEVWEFELSNDNA 419
Query: 411 ---------------IHKGVDEGCINSTAL-CTSPSGTLFAAGSDSGIVNVYNREDFLGG 454
I + D+ T + P A G+++GIVNVY+R G
Sbjct: 420 SKNESKKEPTHHNKIIRRWQDDSGTGITKIKLGGPKNRWLAIGTNNGIVNVYDRNSLTDG 479
Query: 455 KR-KPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLKLIHIPSYTVFSN 505
+ KPIKT+ENL+T + + F D QIL I S KK +L+L+H+PS +V+SN
Sbjct: 480 RHPKPIKTVENLVTSISSLNFTPDGQILCIASRAKKDALRLVHLPSCSVYSN 531
>gb|EAL87684.1| small nucleolar ribonucleoprotein complex subunit, putative
[Aspergillus fumigatus Af293]
Length = 618
Score = 200 bits (508), Expect = 1e-49
Identities = 158/552 (28%), Positives = 263/552 (47%), Gaps = 63/552 (11%)
Query: 13 IEEKEVVDREENSD-VDTVKSKKRKRDRKREEHVV--DMVEQVREMRKLESFLFGSLY-S 68
++E + D E +D V+T K +++ K+ E ++ D V ++ + L + S
Sbjct: 32 VDESDASDVEMEADGVETEKIREKDEVEKKLERMLFGDDEGFVGALKSQDRDLMALMAKS 91
Query: 69 PLESGKEVD----------GEVEPSDLFFTDRSADSVLSVCDEDGEF-SDGSGDGDDGLG 117
E+G E D +V +DLFF D V++ E + SD D +
Sbjct: 92 DEENGSEEDECDDFDDRDLSDVADADLFFLDSGTAPVVTELSETSKAGSDSEEDTEAEET 151
Query: 118 RKPAWVDEEEEKFTVNIAKVNRLRKLRKDEDESFISGSEYVARLRAHHVKLNRGTDWAQL 177
+ W D ++E+ T+++A RLRKLR E E ISG EY+ RLR +L+ DWA+
Sbjct: 152 HRAVWHDSDDERLTISLASHQRLRKLRVTEAEDVISGKEYIKRLRRQFEQLHPVPDWAK- 210
Query: 178 DSRLKLDRSDYDGEL-----TDDENEAV----VRRGYENVDDILRTNEDLVANSSSKLLP 228
L R+D D EL TDDENE + + + + D+ E A KL
Sbjct: 211 -PELNKKRTDSDSELDSDMDTDDENERLSTQPLAKLLQGATDLTTLGESTGAGGKRKLRQ 269
Query: 229 GHLEYSRLVDANIQDPSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKR---NTKIQS 285
++ RL D PS+ ++S+ FH + LLL++G L I N + S
Sbjct: 270 EVIDIHRLKDVGKDQPSS--IDSLMFHPHYPLLLSSGPAATLFIHHISPSAEAPNPLLTS 327
Query: 286 IFLEDCPIRKASFL-PDGSQVILSGRRKFFYSFDLVKGTLEKIGPLVGR--EEKSLEVFE 342
+ + PI ++F P G+++ SGRR++F+ +DL G +EK+ R E+KS+E F+
Sbjct: 328 LHIRRTPIHTSAFAPPTGNKIFASGRRRYFHIWDLDTGKVEKVNGTADRKEEQKSMERFK 387
Query: 343 LSSDSQMIAFVGNE----GYILLVSTKTKQLVGSLKMSGT--TRSLAFSEDGQKLLSAGG 396
LS + + VG+ G I ++ ++T Q + +++ G A+ DG+ + A
Sbjct: 388 LSPCGRYVGLVGSSRKGGGIINVLHSETAQWIAQVRVDGRGGVADFAWWSDGEGMTVASK 447
Query: 397 DGQVYHWDLRTRTCIHKGVDEGCINSTALC-------TSPSGTLFAA-GSDSGIVNVYNR 448
+G+V WD R + + +D G + +T L T G + A GS SG+VNVY+R
Sbjct: 448 NGEVSEWDGRLNRVVARWMDAGAVGTTTLSLGGRSGRTQLGGDRWVAIGSSSGVVNVYDR 507
Query: 449 EDFLGG---------------KRKPIKTIENLITKVDFMRFNHDSQILAICSSMKKSSLK 493
++ +P++ ++ L T + + F D Q L + S K+ +L+
Sbjct: 508 REWAAAYAAQPASSEVSPIPRNPEPVRALDQLTTPISHLVFAPDGQFLVMASRWKRDALR 567
Query: 494 LIHIPSYTVFSN 505
L+H+PS TV+ N
Sbjct: 568 LVHLPSCTVYRN 579
>dbj|BAC37104.1| unnamed protein product [Mus musculus]
Length = 300
Score = 199 bits (506), Expect = 2e-49
Identities = 101/256 (39%), Positives = 162/256 (62%), Gaps = 2/256 (0%)
Query: 252 VQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVILSGRR 311
VQF AQ+++ +G+D + FQ+DGK N KIQSI+LE PI KA F +G +V+ +
Sbjct: 1 VQFQPGAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMH 60
Query: 312 -KFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLVSTKTKQLV 370
K Y +D++ G L + + G +EK+++ FE+S D + G G+ L+S KTK+L+
Sbjct: 61 SKVLYVYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELI 120
Query: 371 GSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINSTALCTSPS 430
GS+K++G + FS D +++ + +G+VY WD+ +R C+++ +DEG + ++ S +
Sbjct: 121 GSMKINGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKN 180
Query: 431 GTLFAAGSDSGIVNVYNREDFLGGKR-KPIKTIENLITKVDFMRFNHDSQILAICSSMKK 489
G A GS SG+VN+YN++ L KPIK I NL+T V + FN ++ILA+ S K
Sbjct: 181 GQYVACGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMK 240
Query: 490 SSLKLIHIPSYTVFSN 505
+++L+H+PS TVFSN
Sbjct: 241 EAVRLVHLPSCTVFSN 256
>ref|XP_415643.1| PREDICTED: similar to WD-repeat protein CGI-48 [Gallus gallus]
Length = 941
Score = 195 bits (495), Expect = 3e-48
Identities = 136/424 (32%), Positives = 213/424 (50%), Gaps = 42/424 (9%)
Query: 7 QNARPKIEEKEVVDREENSDVDTVKSKKRKRDRKREEHVVDMVEQVREMRKLESFLFG-S 65
+ ARP+ +E E E + +R H+ + + R+LE +FG S
Sbjct: 293 KRARPRAKEMEAAAAEAS---------------RRARHLRAISDATAAERELEELVFGDS 337
Query: 66 LYSPLESGKEVDGEVEPSDLFFTDRSADSVLSVCDEDGEFSDGSGDGDDGLGRKPAWVDE 125
L + E G+ + P + L D E + + G G PAWVDE
Sbjct: 338 LVA--EEGELLQRLAGPQ----VSAARSGALPCRSSDSESENEAKGGLPSKG--PAWVDE 389
Query: 126 EEEKFTVNIAKVNRLRK-LRKDEDESFISGSEYVARLRAHHVKLNRGTD-WAQLDSRLKL 183
++E I +R R+ L K + E ++ + ARL + G WA ++R K
Sbjct: 390 DDEA-EERIDMTHRYRRELMKSDAEKILTKKKLKARLEEQFQRAMGGVPAWADRENRKK- 447
Query: 184 DRSDYDGELTDDENEAVVRRGYENVDDILRTNEDLVANSSSKLLPGHLEYSRLVDANIQD 243
+A G + DD+L + V++S S L G LE + AN +
Sbjct: 448 ------------SKQAXXXXGSDEDDDLLCRTGNFVSSSES-LPRGILEMKSCLPANQER 494
Query: 244 PSNGPVNSVQFHRNAQLLLTAGLDQKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGS 303
++G +++VQFH +AQ++LTAG D+ + FQ+DG RN KIQSI+LE PI KA F DG
Sbjct: 495 LADGKLSTVQFHPSAQVVLTAGRDRSVSLFQVDGIRNPKIQSIYLESFPIYKARFSADGE 554
Query: 304 QVILSG-RRKFFYSFDLVKGTLEKIGPLVGREEKSLEVFELSSDSQMIAFVGNEGYILLV 362
QVI +G K FY +D++ G++ + + G EEK ++ FE+S D + G GY+ L+
Sbjct: 555 QVIATGTHHKVFYVYDMMGGSIIPVHQVRGMEEKFVKNFEVSPDGSFMLLTGTSGYLHLL 614
Query: 363 STKTKQLVGSLKMSGTTRSLAFSEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINS 422
S KTK+L+ ++K++G T + AF+ D K+ S +G+V+ WD+R+R C+HK D+G
Sbjct: 615 SMKTKELISTMKVNGRTTACAFTSDSSKMYSYSKEGEVFIWDVRSRQCLHKFEDDGLFGR 674
Query: 423 TALC 426
C
Sbjct: 675 KVYC 678
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 842,554,537
Number of Sequences: 2540612
Number of extensions: 37362431
Number of successful extensions: 118413
Number of sequences better than 10.0: 1835
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 1578
Number of HSP's that attempted gapping in prelim test: 112928
Number of HSP's gapped (non-prelim): 5143
length of query: 509
length of database: 863,360,394
effective HSP length: 132
effective length of query: 377
effective length of database: 527,999,610
effective search space: 199055852970
effective search space used: 199055852970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0055.8