BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0055.1
(241 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ72499.1| MADS-box protein 14 [Petunia x hybrida] 310 2e-83
emb|CAD40988.2| OSJNBa0072F16.13 [Oryza sativa (japonica cultiva... 290 2e-77
gb|AAO47706.1| transcription factor MADS27 [Oryza sativa (japoni... 285 6e-76
emb|CAA71739.1| DEFH125 protein [Antirrhinum majus] gi|7489303|p... 283 2e-75
gb|AAO64796.1| At2g14210 [Arabidopsis thaliana] gi|4586018|gb|AA... 280 2e-74
emb|CAB09793.1| ANR1 , MADS-box protein [Arabidopsis thaliana] g... 278 7e-74
gb|AAO85643.1| MADS-box transcription factor MADS2 [Zea mays] 277 2e-73
gb|AAG09919.1| MADS box protein 2 [Zea mays] 276 3e-73
gb|AAL73213.1| MADS-box protein AGL21 [Arabidopsis thaliana] gi|... 273 3e-72
ref|NP_191282.2| MADS-box protein (AGL16) [Arabidopsis thaliana] 271 1e-71
gb|AAD15571.1| putative MADS-box protein AGL17 [Arabidopsis thal... 255 9e-67
ref|XP_467621.1| transcription factor MADS57 [Oryza sativa (japo... 253 3e-66
gb|AAO47712.1| transcription factor MADS57 [Oryza sativa (japoni... 253 3e-66
gb|AAO72601.1| MADS box protein-like protein [Oryza sativa (japo... 252 7e-66
gb|AAB51377.1| MADS-box protein [Medicago sativa] gi|7488744|pir... 246 5e-64
dbj|BAD29571.1| putative transcription factor MADS27 [Oryza sati... 244 2e-63
gb|AAC49084.1| MADS-box protein AGL17 241 1e-62
emb|CAB68129.1| MADS-box transcription factor-like protein [Arab... 237 2e-61
emb|CAD40494.2| OSJNBa0079M09.14 [Oryza sativa (japonica cultiva... 234 2e-60
gb|AAG37899.1| MADS-box protein AGL16 [Arabidopsis thaliana] 231 1e-59
>gb|AAQ72499.1| MADS-box protein 14 [Petunia x hybrida]
Length = 238
Score = 310 bits (795), Expect = 2e-83
Identities = 162/238 (68%), Positives = 194/238 (81%), Gaps = 2/238 (0%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI I+RIDN+TSRQVTFSKRR+GLLKKAKELSILCDA+VGLI+FSSTGKLYE+AS
Sbjct: 1 MGRGKIVIQRIDNTTSRQVTFSKRRSGLLKKAKELSILCDAQVGLIIFSSTGKLYEFASN 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SM+SVIERY K+KEEH+ LM+P SE+K+WQ E ASLRQQL YLQE HRQL+GE LSGLG+
Sbjct: 61 SMRSVIERYYKMKEEHH-LMSPMSEVKYWQREVASLRQQLHYLQENHRQLLGEKLSGLGI 119
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
K+L +LEN+LEMSLKGVR +K+QILTDEIKE+ +KGNLIHQEN ELYKK+ LI++EN +L
Sbjct: 120 KDLTHLENKLEMSLKGVRKQKEQILTDEIKEITRKGNLIHQENIELYKKVNLIRQENTDL 179
Query: 181 QKKVYEARSTNEKDAASSPSCTIRNGYDLQA-ISLQLSQPQPQFSEPPAKAVKLGYSL 237
QKKVYE +E + + I NGYDL A I LQL PQ Q ++ ++ G L
Sbjct: 180 QKKVYEKGCGSEPNEGVQATFAISNGYDLHAPIYLQLRPPQTQKNQTSTSVMQFGLQL 237
>emb|CAD40988.2| OSJNBa0072F16.13 [Oryza sativa (japonica cultivar-group)]
gi|50924820|ref|XP_472756.1| OSJNBa0072F16.13 [Oryza
sativa (japonica cultivar-group)]
Length = 235
Score = 290 bits (743), Expect = 2e-77
Identities = 153/236 (64%), Positives = 184/236 (77%), Gaps = 3/236 (1%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNG+ KKAKEL+ILCDAEVGL++FSSTG+LYEYAST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKSVI+RY + KEE + NP SELKFWQ EAASLRQQL LQE HRQLMG+ LSGLGV
Sbjct: 61 SMKSVIDRYGRAKEEQQHVANPNSELKFWQREAASLRQQLHSLQENHRQLMGQDLSGLGV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
KELQ LENQLEMS++ +R KKDQ++ DEI EL++KG+LIHQEN ELY+K+ LI++ENAEL
Sbjct: 121 KELQTLENQLEMSIRCIRTKKDQLMIDEIHELNRKGSLIHQENMELYRKVNLIRQENAEL 180
Query: 181 QKKVYEARSTNE--KDAASSPSCTIRNGYDLQAISLQLSQPQPQFSEPPAKAVKLG 234
KK+YE + NE +D+ + + + + A L+L+ P Q KLG
Sbjct: 181 YKKLYETGAENEANRDSTTPYNFAVIEEANTPA-RLELNPPSQQNDAEQTTPPKLG 235
>gb|AAO47706.1| transcription factor MADS27 [Oryza sativa (japonica
cultivar-group)]
Length = 240
Score = 285 bits (730), Expect = 6e-76
Identities = 143/192 (74%), Positives = 165/192 (85%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNG+ KKAKEL+ILCDAEVGL++FSSTG+LYEY+ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKSVI+RY K K+E + NP SELKFWQ EAASLRQQL LQE HRQLMGE LSGL V
Sbjct: 61 SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
KELQ+LENQLE+SL+ VR KKD +L DEI EL++KG+L+HQEN ELYKK+ LI++ENAEL
Sbjct: 121 KELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAEL 180
Query: 181 QKKVYEARSTNE 192
KK+YE +E
Sbjct: 181 YKKIYETEGPSE 192
>emb|CAA71739.1| DEFH125 protein [Antirrhinum majus] gi|7489303|pir||T17029 MADS-box
transcription factor DEFH125 - garden snapdragon
Length = 234
Score = 283 bits (725), Expect = 2e-75
Identities = 145/223 (65%), Positives = 180/223 (80%), Gaps = 1/223 (0%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI I+RID STSRQVTFSKRR+GLLKKAKEL+ILCDAEVG+++FSSTGKLYE++ST
Sbjct: 1 MGRGKIVIQRIDKSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVVIFSSTGKLYEFSST 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKS+IER+ K KE+H+QL+N SE+KFWQ EAA+LRQQLQ LQE HR+LMGE L GL V
Sbjct: 61 SMKSIIERHTKTKEDHHQLLNHGSEVKFWQREAATLRQQLQDLQENHRKLMGEELQGLNV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
++L LENQLEMSL+GVRMKK Q+LTDE+ EL +KG+LIHQEN ELY+K++L+Q+EN EL
Sbjct: 121 EDLHRLENQLEMSLRGVRMKKVQMLTDEVHELRRKGHLIHQENNELYEKVKLLQQENKEL 180
Query: 181 QKKVYEARSTNEKDAASSPSCTIRNGYD-LQAISLQLSQPQPQ 222
KK Y R + + + G + + I L LSQP+P+
Sbjct: 181 CKKAYGTRDVSAANGTALVPFGFAIGREQFEPIQLHLSQPEPE 223
>gb|AAO64796.1| At2g14210 [Arabidopsis thaliana] gi|4586018|gb|AAD25638.1| putative
MADS-box protein ANR1 [Arabidopsis thaliana]
gi|15225607|ref|NP_179033.1| MADS-box protein (ANR1)
[Arabidopsis thaliana] gi|25307912|pir||A84515 probable
MADS-box protein ANR1 [imported] - Arabidopsis thaliana
Length = 234
Score = 280 bits (717), Expect = 2e-74
Identities = 150/239 (62%), Positives = 191/239 (79%), Gaps = 8/239 (3%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAS- 59
MGRGKI IRRIDNSTSRQVTFSKRR+GLLKKAKELSILCDAEVG+I+FSSTGKLY+YAS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 60 TSMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLG 119
+SMK++IERYN++KEE +QL+N ASE+KFWQ E ASL+QQLQYLQECHR+L+GE LSG+
Sbjct: 61 SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120
Query: 120 VKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAE 179
+LQNLE+QL SLKGVR+KKDQ++T+EI+EL++KG +I +EN EL +++++KEN +
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIK 180
Query: 180 LQKKVYEARSTNEKDAASSPSCTIRNGYDLQA-ISLQLSQPQPQFSEPPAKAVKLGYSL 237
LQKKV+ + E +++ P I NG A LQL Q QP P K+++LG L
Sbjct: 181 LQKKVHGRTNAIEGNSSVDP---ISNGTTTYAPPQLQLIQLQP---APREKSIRLGLQL 233
>emb|CAB09793.1| ANR1 , MADS-box protein [Arabidopsis thaliana]
gi|25307925|pir||T52100 MADS-box transcription factor
ANR1 [validated] - Arabidopsis thaliana
Length = 234
Score = 278 bits (712), Expect = 7e-74
Identities = 149/239 (62%), Positives = 191/239 (79%), Gaps = 8/239 (3%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAS- 59
MGRGKI IRRIDNSTSRQVTFSKRR+GLLKKAKELSILCDAEVG+I+FSSTGKLY+YAS
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 60 TSMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLG 119
+SMK++IERYN++KEE +QL+N ASE+KFWQ E ASL+QQLQ+LQECHR+L+GE LSG+
Sbjct: 61 SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQHLQECHRKLVGEELSGMN 120
Query: 120 VKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAE 179
+LQNLE+QL SLKGVR+KKDQ++T+EI+EL++KG +I +EN EL +++++KEN +
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIK 180
Query: 180 LQKKVYEARSTNEKDAASSPSCTIRNGYDLQA-ISLQLSQPQPQFSEPPAKAVKLGYSL 237
LQKKV+ + E +++ P I NG A LQL Q QP P K+++LG L
Sbjct: 181 LQKKVHGRTNVIEGNSSVDP---ISNGTTTYAPPQLQLIQLQP---APREKSIRLGLQL 233
>gb|AAO85643.1| MADS-box transcription factor MADS2 [Zea mays]
Length = 240
Score = 277 bits (709), Expect = 2e-73
Identities = 147/239 (61%), Positives = 181/239 (75%), Gaps = 3/239 (1%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNG+ KKAKEL+ILCDAEVGL++FSSTG+LYEY+ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYSST 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKSVI+RY K KEE + NP SELKFWQ EAASLRQQL LQE +RQL G+ LSGL V
Sbjct: 61 SMKSVIDRYGKAKEEQQDVANPNSELKFWQREAASLRQQLHNLQENYRQLTGDDLSGLNV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
KELQ+LENQLE SL+GVR KKD +L DEI +L++K +L HQEN +LY K+ LI++EN EL
Sbjct: 121 KELQSLENQLETSLRGVRAKKDHLLIDEIHDLNRKASLFHQENTDLYNKINLIRQENDEL 180
Query: 181 QKKVYEARSTN--EKDAASSPSCTIRNGYDLQAISLQLSQPQPQFSEPPAKAVKLGYSL 237
KK+YE + +++ + + + D+ + L+LS Q + P+ A KLG L
Sbjct: 181 HKKIYETEGPSGVNRESPTPFNFAVVETRDV-PVQLELSTLPQQNNIEPSTAPKLGLQL 238
>gb|AAG09919.1| MADS box protein 2 [Zea mays]
Length = 240
Score = 276 bits (707), Expect = 3e-73
Identities = 147/239 (61%), Positives = 181/239 (75%), Gaps = 3/239 (1%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNG+ KKAKEL+ILCDAEVGL++FSSTG+LYEY+ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYSST 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKSVI+RY K KEE + NP SELKFWQ EAASLRQQL LQE +RQL G+ LSGL V
Sbjct: 61 SMKSVIDRYGKAKEEQQVVANPNSELKFWQREAASLRQQLHNLQENYRQLTGDDLSGLNV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
KELQ+LENQLE SL+GVR KKD +L DEI +L++K +L HQEN +LY K+ LI++EN EL
Sbjct: 121 KELQSLENQLETSLRGVRAKKDHLLIDEIHDLNRKASLFHQENTDLYNKINLIRQENDEL 180
Query: 181 QKKVYEARSTN--EKDAASSPSCTIRNGYDLQAISLQLSQPQPQFSEPPAKAVKLGYSL 237
KK+YE + +++ + + + D+ + L+LS Q + P+ A KLG L
Sbjct: 181 HKKIYETEGPSGVNRESPTPFNFAVVETRDV-PVQLELSTLPQQNNIEPSTAPKLGLQL 238
>gb|AAL73213.1| MADS-box protein AGL21 [Arabidopsis thaliana]
gi|7270777|emb|CAB80459.1| MADS-box protein AGL17-like
protein [Arabidopsis thaliana]
gi|4467100|emb|CAB37534.1| MADS-box protein AGL17-like
protein [Arabidopsis thaliana]
gi|15235748|ref|NP_195507.1| MADS-box family protein
[Arabidopsis thaliana] gi|7446565|pir||T05621 MADS-box
protein AGL17 homolog F20D10.60 - Arabidopsis thaliana
gi|12229674|sp|Q9SZJ6|AGLX_ARATH Agamous-like MADS box
protein At4g37940
Length = 228
Score = 273 bits (698), Expect = 3e-72
Identities = 142/230 (61%), Positives = 178/230 (76%), Gaps = 4/230 (1%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI I+RID+STSRQVTFSKRR GL+KKAKEL+ILCDAEVGLI+FSSTGKLY++AS+
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKSVI+RYNK K E QL+NPASE+KFWQ EAA LRQ+L LQE HRQ+MGE L+GL V
Sbjct: 61 SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
EL +LENQ+E+SL+G+RM+K+Q+LT EI+EL QK NLIHQEN +L +K++ I +EN EL
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180
Query: 181 QKKVYEARSTNEKDAASSPSCTIRNGYDLQAISLQLSQPQPQFSEPPAKA 230
KK Y A + + + + + I LQLSQP+ + P +A
Sbjct: 181 YKKAYMANT----NGFTHREVAVADDESHTQIRLQLSQPEHSDYDTPPRA 226
>ref|NP_191282.2| MADS-box protein (AGL16) [Arabidopsis thaliana]
Length = 240
Score = 271 bits (693), Expect = 1e-71
Identities = 143/240 (59%), Positives = 188/240 (77%), Gaps = 10/240 (4%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKIAI+RI+NSTSRQVTFSKRRNGLLKKAKEL+ILCDAEVG+I+FSSTG+LY+++S+
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKSVIERY+ K E + +PASE++FWQ EAA L++QL LQE HRQ+MGE LSGL V
Sbjct: 61 SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
+ LQNLENQLE+SL+GVRMKKDQ+L +EI+ L+++GNL+HQEN +L+KK+ L+ ++N EL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180
Query: 181 QKKVYEARSTNEKDAASSPSCTIRNGYDL-----QAISLQLSQPQPQFSEPPAKAVKLGY 235
+KV E ++ + + NG D+ + + LQLSQPQ E +KA++L Y
Sbjct: 181 HEKVSEVEGVK----IANKNSLLTNGLDMRDTSNEHVHLQLSQPQHD-HETHSKAIQLNY 235
>gb|AAD15571.1| putative MADS-box protein AGL17 [Arabidopsis thaliana]
gi|15227254|ref|NP_179848.1| MADS-box protein (AGL17)
[Arabidopsis thaliana] gi|25307913|pir||H84614 probable
MADS-box protein AGL17 [imported] - Arabidopsis thaliana
gi|12643745|sp|Q38840|AGL17_ARATH Agamous-like MADS box
protein AGL17
Length = 227
Score = 255 bits (651), Expect = 9e-67
Identities = 135/221 (61%), Positives = 170/221 (76%), Gaps = 5/221 (2%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI I++ID+STSRQVTFSKRR GL+KKAKEL+ILCDAEV LI+FS+T KLY++AS+
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
S+KS IER+N K E +LMNPASE+KFWQ EA +LRQ+L LQE +RQL G L+GL V
Sbjct: 61 SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
KELQN+E+QLEMSL+G+RMK++QILT+EIKEL +K NL+H EN EL +K++ I +EN EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180
Query: 181 QKKVYEARSTNEKDAASSPSCTIRNGYDLQA-ISLQLSQPQ 220
KK Y +TN Y+ A + LQLSQP+
Sbjct: 181 YKKAYGTSNTNGLGHHELVDAV----YESHAQVRLQLSQPE 217
>ref|XP_467621.1| transcription factor MADS57 [Oryza sativa (japonica
cultivar-group)] gi|46390472|dbj|BAD15933.1|
transcription factor MADS57 [Oryza sativa (japonica
cultivar-group)]
Length = 237
Score = 253 bits (646), Expect = 3e-66
Identities = 140/234 (59%), Positives = 170/234 (71%), Gaps = 16/234 (6%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGL+VFSSTG+LYE++ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SMKSVIERYNKLKEEHNQLM--NPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGL 118
+MK+VI+RY KEE L+ N SE+K WQ EAASLRQQL LQE H+QLMGE LSGL
Sbjct: 61 NMKTVIDRYTNAKEE---LLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGL 117
Query: 119 GVKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENA 178
GV++LQ LEN+LE+SL+ +RM+KD +L EI+ELH KG+LIHQEN EL + + ++ ++
Sbjct: 118 GVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKL 177
Query: 179 ELQKKVYEARSTNEKDAASSPSCTIRNGYDLQAI-------SLQLSQPQPQFSE 225
EL K+ DA S S Y + I SL+LSQ Q + E
Sbjct: 178 ELYNKLQACEQRGATDANESSS----TPYSFRIIQNANMPPSLELSQSQQREGE 227
>gb|AAO47712.1| transcription factor MADS57 [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 253 bits (646), Expect = 3e-66
Identities = 140/234 (59%), Positives = 170/234 (71%), Gaps = 16/234 (6%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGL+VFSSTG+LYE++ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SMKSVIERYNKLKEEHNQLM--NPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGL 118
+MK+VI+RY KEE L+ N SE+K WQ EAASLRQQL LQE H+QLMGE LSGL
Sbjct: 61 NMKTVIDRYTNAKEE---LLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGL 117
Query: 119 GVKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENA 178
GV++LQ LEN+LE+SL+ +RM+KD +L EI+ELH KG+LIHQEN EL + + ++ ++
Sbjct: 118 GVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKL 177
Query: 179 ELQKKVYEARSTNEKDAASSPSCTIRNGYDLQAI-------SLQLSQPQPQFSE 225
EL K+ DA S S Y + I SL+LSQ Q + E
Sbjct: 178 ELYNKLQACEQRGATDANESSS----TPYSFRIIQNANMPPSLELSQSQQREGE 227
>gb|AAO72601.1| MADS box protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 252 bits (643), Expect = 7e-66
Identities = 140/234 (59%), Positives = 169/234 (71%), Gaps = 16/234 (6%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGL+VFSSTG LYE++ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGXLYEFSST 60
Query: 61 SMKSVIERYNKLKEEHNQLM--NPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGL 118
+MK+VI+RY KEE L+ N SE+K WQ EAASLRQQL LQE H+QLMGE LSGL
Sbjct: 61 NMKTVIDRYTNAKEE---LLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGL 117
Query: 119 GVKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENA 178
GV++LQ LEN+LE+SL+ +RM+KD +L EI+ELH KG+LIHQEN EL + + ++ ++
Sbjct: 118 GVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKL 177
Query: 179 ELQKKVYEARSTNEKDAASSPSCTIRNGYDLQAI-------SLQLSQPQPQFSE 225
EL K+ DA S S Y + I SL+LSQ Q + E
Sbjct: 178 ELYNKLQACEQRGATDANESSS----TPYSFRIIQNANMPPSLELSQSQQREGE 227
>gb|AAB51377.1| MADS-box protein [Medicago sativa] gi|7488744|pir||T09700 MADS-box
protein - alfalfa (fragment)
Length = 240
Score = 246 bits (627), Expect = 5e-64
Identities = 123/168 (73%), Positives = 149/168 (88%)
Query: 3 RGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYASTSM 62
RGKI I+RI+N+T+RQV FSKRRNGLLKKAKEL+ILCDAEVG+++FSST KLY++ASTS+
Sbjct: 1 RGKIQIKRIENTTNRQVIFSKRRNGLLKKAKELAILCDAEVGVMIFSSTAKLYDFASTSL 60
Query: 63 KSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGVKE 122
+SVI RYNK KEEHNQL + ASE+KF Q EAA LRQQL LQE HRQ+MGE LSGL VKE
Sbjct: 61 RSVIGRYNKSKEEHNQLGSTASEIKFGQREAAVLRQQLHNLQESHRQIMGEELSGLTVKE 120
Query: 123 LQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKM 170
LQ LENQLE+SL+GVRMKK+Q+ DEI+EL++KG++IHQEN ELY+K+
Sbjct: 121 LQGLENQLEISLRGVRMKKEQLFMDEIQELNRKGDIIHQENVELYRKV 168
>dbj|BAD29571.1| putative transcription factor MADS27 [Oryza sativa (japonica
cultivar-group)]
Length = 236
Score = 244 bits (623), Expect = 2e-63
Identities = 127/193 (65%), Positives = 152/193 (77%), Gaps = 1/193 (0%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKI IRRIDNSTSRQVTFSKRRNG+ KKAKEL+ILCDAEVGL++FSSTG+LYEY+ST
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLR-QQLQYLQECHRQLMGEGLSGLG 119
SMKSVI+RY K K+E + NP SELK + L Q ++ LMGE LSGL
Sbjct: 61 SMKSVIDRYGKSKDEQQAVANPNSELKVLAKGGSKLETTTAQLARKSSVWLMGEDLSGLN 120
Query: 120 VKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAE 179
VKELQ+LENQLE+SL+ VR KKD +L DEI EL++KG+L+HQEN ELYKK+ LI++ENAE
Sbjct: 121 VKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAE 180
Query: 180 LQKKVYEARSTNE 192
L KK+YE +E
Sbjct: 181 LYKKIYETEGPSE 193
>gb|AAC49084.1| MADS-box protein AGL17
Length = 205
Score = 241 bits (616), Expect = 1e-62
Identities = 121/184 (65%), Positives = 153/184 (82%)
Query: 8 IRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYASTSMKSVIE 67
I++ID+STSRQVTFSKRR GL+KKAKEL+ILCDAEV LI+FS+T KLY++AS+S+KS IE
Sbjct: 1 IQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIE 60
Query: 68 RYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGVKELQNLE 127
R+N K E +LMNPASE+KFWQ EA +LRQ+L LQE +RQL G L+GL VKELQN+E
Sbjct: 61 RFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIE 120
Query: 128 NQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAELQKKVYEA 187
+QLEMSL+G+RMK++QILT+EIKEL +K NL+H EN EL +K++ I +EN EL KK Y
Sbjct: 121 SQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVELYKKAYGT 180
Query: 188 RSTN 191
+TN
Sbjct: 181 SNTN 184
>emb|CAB68129.1| MADS-box transcription factor-like protein [Arabidopsis thaliana]
gi|11278951|pir||T45801 MADS-box transcription
factor-like protein - Arabidopsis thaliana
Length = 239
Score = 237 bits (605), Expect = 2e-61
Identities = 133/242 (54%), Positives = 178/242 (72%), Gaps = 15/242 (6%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKIAI+RI+NSTSRQVTFSKRRNGLLKKAKEL+ILCDAEVG+I+FSSTG+LY+++S+
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQE--CHRQLMGEGLSGL 118
SMKSVIERY+ K E + +PASE+ Q ++ Y +E RQ+MGE LSGL
Sbjct: 61 SMKSVIERYSDAKGETSSENDPASEI---QEMYIVTLEKYAYSEELVLDRQMMGEELSGL 117
Query: 119 GVKELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENA 178
V+ LQNLENQLE+SL+GVRMKKDQ+L +EI+ L+++GNL+HQEN +L+KK+ L+ ++N
Sbjct: 118 SVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNM 177
Query: 179 ELQKKVYEARSTNEKDAASSPSCTIRNGYDL-----QAISLQLSQPQPQFSEPPAKAVKL 233
EL +KV E ++ + + NG D+ + + LQLSQPQ E +KA++L
Sbjct: 178 ELHEKVSEVEGVK----IANKNSLLTNGLDMRDTSNEHVHLQLSQPQHD-HETHSKAIQL 232
Query: 234 GY 235
Y
Sbjct: 233 NY 234
>emb|CAD40494.2| OSJNBa0079M09.14 [Oryza sativa (japonica cultivar-group)]
gi|50922721|ref|XP_471721.1| OSJNBa0079M09.14 [Oryza
sativa (japonica cultivar-group)]
gi|33090203|gb|AAO47705.2| transcription factor MADS25
[Oryza sativa (japonica cultivar-group)]
Length = 227
Score = 234 bits (596), Expect = 2e-60
Identities = 122/225 (54%), Positives = 165/225 (73%), Gaps = 7/225 (3%)
Query: 1 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYAST 60
MGRGKIAI+RIDN+ +RQVTFSKRR GL+KKA+EL+ILCDA+VGLIVFS TG+LY+++S+
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 SMKSVIERYNKLKEEHNQLMNPASELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGV 120
SMKS+IERY + EEH +L+NP SE KFWQ E +LRQQ+Q L +RQL+GE +S V
Sbjct: 61 SMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTV 120
Query: 121 KELQNLENQLEMSLKGVRMKKDQILTDEIKELHQKGNLIHQENAELYKKMELIQKENAEL 180
++LQ L+NQ+EMSL +R KKDQ+L +EI +L++KG+L+ +EN+EL KK + + N EL
Sbjct: 121 RDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIAHQRNIEL 180
Query: 181 QKKVYEARSTNEKDAASS-----PSCTIRNGYDLQAISLQLSQPQ 220
KK+ ST+ + S S T R+ I L+LSQ +
Sbjct: 181 HKKLNSGESTSSEQVTRSSKDPGESSTPRD--SRVCIDLELSQKE 223
>gb|AAG37899.1| MADS-box protein AGL16 [Arabidopsis thaliana]
Length = 217
Score = 231 bits (589), Expect = 1e-59
Identities = 122/217 (56%), Positives = 165/217 (75%), Gaps = 10/217 (4%)
Query: 24 RRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYASTSMKSVIERYNKLKEEHNQLMNPA 83
RRNGLLKKAKEL+ILCDAEVG+I+FSSTG+LY+++S+SMKSVIERY+ K E + +PA
Sbjct: 1 RRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSSENDPA 60
Query: 84 SELKFWQTEAASLRQQLQYLQECHRQLMGEGLSGLGVKELQNLENQLEMSLKGVRMKKDQ 143
SE++FWQ EAA L++QL LQE HRQ+MGE LSGL V+ LQNLENQLE+SL+GVRMKKDQ
Sbjct: 61 SEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQ 120
Query: 144 ILTDEIKELHQKGNLIHQENAELYKKMELIQKENAELQKKVYEARSTNEKDAASSPSCTI 203
+L +EI+ L+++GNL+HQEN +L+KK+ L+ ++N EL +KV E ++ + +
Sbjct: 121 MLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMELHEKVSEVEGVK----IANKNSLL 176
Query: 204 RNGYDL-----QAISLQLSQPQPQFSEPPAKAVKLGY 235
NG D+ + + LQLSQPQ E +KA++L Y
Sbjct: 177 TNGLDMRDTSNEHVHLQLSQPQHD-HETHSKAIQLNY 212
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.312 0.129 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 360,495,957
Number of Sequences: 2540612
Number of extensions: 13865255
Number of successful extensions: 65978
Number of sequences better than 10.0: 3757
Number of HSP's better than 10.0 without gapping: 1954
Number of HSP's successfully gapped in prelim test: 1831
Number of HSP's that attempted gapping in prelim test: 60372
Number of HSP's gapped (non-prelim): 6099
length of query: 241
length of database: 863,360,394
effective HSP length: 124
effective length of query: 117
effective length of database: 548,324,506
effective search space: 64153967202
effective search space used: 64153967202
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0055.1