BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0052b.11
(434 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV59313.1| putative tubby protein [Oryza sativa (japonica cu... 657 0.0
gb|AAC00626.1| similar to 'tub' protein gp|U82468|2072162 [Arabi... 613 e-174
ref|NP_915646.1| putative tubby protein [Oryza sativa (japonica ... 612 e-174
ref|NP_173899.1| F-box family protein / tubby family protein [Ar... 609 e-173
emb|CAB53492.1| CAA303719.1 protein [Oryza sativa] 608 e-172
ref|XP_474442.1| OSJNBa0039K24.2 [Oryza sativa (japonica cultiva... 607 e-172
ref|XP_479670.1| putative chain A, C-terminal domain of mouse br... 601 e-170
gb|AAX95106.1| Tub family, putative [Oryza sativa (japonica cult... 590 e-167
gb|AAM67505.1| unknown protein [Arabidopsis thaliana] gi|1817605... 582 e-164
gb|AAN46232.1| unknown protein [Arabidopsis thaliana] 556 e-157
gb|AAN46231.1| unknown protein [Arabidopsis thaliana] gi|2818860... 556 e-157
gb|AAN46233.1| unknown protein [Arabidopsis thaliana] 554 e-156
gb|AAN46237.1| unknown protein [Arabidopsis lyrata] gi|28188621|... 550 e-155
dbj|BAA82866.1| tubby-like protein [Lemna paucicostata] 529 e-149
gb|AAD39275.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 506 e-142
gb|AAM20254.1| putative tubby protein [Arabidopsis thaliana] gi|... 458 e-127
gb|AAM15124.1| putative tubby protein [Arabidopsis thaliana] gi|... 454 e-126
ref|XP_467371.1| putative tubby-like protein [Oryza sativa (japo... 445 e-123
ref|NP_910978.1| putative tubby related protein [Oryza sativa (j... 432 e-119
emb|CAB88665.1| tubby-like protein [Cicer arietinum] 422 e-116
>gb|AAV59313.1| putative tubby protein [Oryza sativa (japonica cultivar-group)]
gi|50931567|ref|XP_475311.1| putative tubby protein
[Oryza sativa (japonica cultivar-group)]
gi|46981293|gb|AAT07611.1| putative tubby protein [Oryza
sativa (japonica cultivar-group)]
Length = 445
Score = 657 bits (1694), Expect = 0.0
Identities = 344/453 (75%), Positives = 380/453 (82%), Gaps = 27/453 (5%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPG------HSRSKSRSSVHELHDQPLVIQSSRWA 54
MSFRSIVRDVRD FGSLSRRSF+V L G H R KS+S+VHEL D L+IQ SRWA
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
Query: 55 SLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSL 114
SLPPELLRDVI+RLE +ES WP RK VV+CAAVCK+WREMCKEIV SPEFCGK+TFP+SL
Sbjct: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
Query: 115 KQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMD 174
KQPG RDG IQCFIKRDKSK TYHL+LCLS A+L ++GKFLLSAKR R+TTCTEY+ISMD
Sbjct: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
Query: 175 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGR-SRRFNSKKVSPKVPSG 233
ADNISRSSSTYIGKLRSNFLGTKFIIYDTQP YN A + P GR SRRFNSKKVSPK+PSG
Sbjct: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
Query: 234 SYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPE-LLPRALEDSFRS-I 291
SYNIAQVTYELNVLGTRGPRRM+C MHSIPASS++ GG VPG+PE ++PRA E+SFRS
Sbjct: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTT 300
Query: 292 SFARS--------IDNSTEFSSARFSDIIGAG-NEEEEEEGKERPLVLKNKSPRWHEQLQ 342
SF++S +S +FSSARFSDI G N +EE + KERPLVL+NK+PRWHEQLQ
Sbjct: 301 SFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360
Query: 343 CWCLNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQP-PSDPDKIILQFGKV 401
CWCLNFRGRVT+ASVKNFQLIAA PA PP GA PSQP P + DKIILQFGKV
Sbjct: 361 CWCLNFRGRVTIASVKNFQLIAA--PAQ----PP--AGAPTPSQPAPPEQDKIILQFGKV 412
Query: 402 GKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
KDMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 413 AKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
>gb|AAC00626.1| similar to 'tub' protein gp|U82468|2072162 [Arabidopsis thaliana]
gi|22654973|gb|AAM98079.1| At1g76900/F7O12_7
[Arabidopsis thaliana] gi|27764966|gb|AAO23604.1|
At1g76900/F7O12_7 [Arabidopsis thaliana]
gi|15223772|ref|NP_177816.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
gi|30699209|ref|NP_849894.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
gi|33320965|gb|AAQ06240.1| tubby-like protein TULP1
[Arabidopsis thaliana] gi|12322225|gb|AAG51146.1| Tub
family protein, putative [Arabidopsis thaliana]
gi|25406477|pir||H96797 hypothetical protein F22K20.1
[imported] - Arabidopsis thaliana
Length = 455
Score = 613 bits (1582), Expect = e-174
Identities = 327/455 (71%), Positives = 367/455 (79%), Gaps = 21/455 (4%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRS--KSRSSVHELHDQPLV--IQSSRWASL 56
MSFRSIVRDVRD GSLSRRSFD L ++ KSR SV + H++ LV IQ + WA+L
Sbjct: 1 MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANL 60
Query: 57 PPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQ 116
PPELLRDVIKRLE +ES WP R+HVVACA+VC+SWR+MCKEIV SPE GKITFPVSLKQ
Sbjct: 61 PPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQ 120
Query: 117 PGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDAD 176
PG RD +QCFIKRDKS LTYHL+LCLSPALLVENGKFLLSAKR RRTT TEY+ISM AD
Sbjct: 121 PGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHAD 180
Query: 177 NISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNN---AQLSPPGRSRRFNSKKVSPKVPSG 233
ISRSS+TYIGK+RSNFLGTKFIIYDTQP YN+ + P G SRRF SK+VSPKVPSG
Sbjct: 181 TISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPKVPSG 240
Query: 234 SYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELL-PRA-LEDSFRSI 291
SY IAQV+YELNVLGTRGPRRM+C M+SIPASSL GG+VPG+P+++ PR+ L++SFRSI
Sbjct: 241 SYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSI 300
Query: 292 SFARS----IDNSTEFSSARFSDIIGAGNEEEE---EEGKER---PLVLKNKSPRWHEQL 341
+ + S D S +FSSARFSDI+G +E++E EEGKER PLVLKNK PRWHEQL
Sbjct: 301 TSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQL 360
Query: 342 QCWCLNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAA--PPSQPPSDPDKIILQFG 399
QCWCLNFRGRVTVASVKNFQLIAA QP P PS PDKIILQFG
Sbjct: 361 QCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFG 420
Query: 400 KVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
KVGKDMFTMD+RYPLSAFQAFAICL+SFDTKLACE
Sbjct: 421 KVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455
>ref|NP_915646.1| putative tubby protein [Oryza sativa (japonica cultivar-group)]
gi|21644661|dbj|BAC01219.1| putative tubby-like protein
TULP10 [Oryza sativa (japonica cultivar-group)]
Length = 448
Score = 612 bits (1578), Expect = e-174
Identities = 320/456 (70%), Positives = 367/456 (80%), Gaps = 30/456 (6%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILP------GHSRSKSRSSVHELHDQPLVIQSSRWA 54
MSFRSIVRDVRDGFGSLSRRSF+V L GH + K++SS+ EL D P +I SRWA
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWA 60
Query: 55 SLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSL 114
SLPPELLR+VI+RLE +ES WP R++VV AAVC++WREMCKE V SPEFCGK+TFPVS+
Sbjct: 61 SLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSI 120
Query: 115 KQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMD 174
KQPG RDG IQC+IKR++SK TYHL+LCLS + E GKF+L+AKR R+TTCTEY ISM
Sbjct: 121 KQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMV 180
Query: 175 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGR-SRRFNSKKVSPKVPSG 233
+ NISRSS T IGKLRSNFLGTKFIIYDTQPPYN A + GR S+RFNS KVSPKVPS
Sbjct: 181 SGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPSV 240
Query: 234 SYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPE-LLPRALEDSFRS-- 290
+YNIAQV+YELNVLGTRGPRRM C MHSIPASS++ GG VPG+PE ++PRALEDSFRS
Sbjct: 241 TYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTT 300
Query: 291 ---------ISFARSI-DNSTEFSSARFSDIIGA-GNEEEEEEGKERPLVLKNKSPRWHE 339
SF++SI D S +FSSARFSDI G+ ++ E KERPLVL+NK PRWHE
Sbjct: 301 SFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHE 360
Query: 340 QLQCWCLNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQP-PSDPDKIILQF 398
QLQCWCLNFRGRVT+ASVKNFQL+AA P PP GA PSQP P+DP+K+ILQF
Sbjct: 361 QLQCWCLNFRGRVTIASVKNFQLVAAPSP------PP--AGAPTPSQPGPADPEKVILQF 412
Query: 399 GKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
GKV +DMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 413 GKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 448
>ref|NP_173899.1| F-box family protein / tubby family protein [Arabidopsis thaliana]
gi|33320973|gb|AAQ06244.1| tubby-like protein TULP10
[Arabidopsis thaliana] gi|25518577|pir||E86382
hypothetical protein F4F7.33 [imported] - Arabidopsis
thaliana gi|11067277|gb|AAG28805.1| unknown protein
[Arabidopsis thaliana]
Length = 445
Score = 609 bits (1571), Expect = e-173
Identities = 317/450 (70%), Positives = 365/450 (80%), Gaps = 21/450 (4%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQ------PLVIQSSRWA 54
MSFR IV+D+RDGFGSLSRRSFD L + K++ S + P+++Q+SRWA
Sbjct: 1 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWA 60
Query: 55 SLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSL 114
+LPPELL DVIKRLE +ES WP RKHVVACA+VC+SWR MC+EIV PE CGK+TFPVSL
Sbjct: 61 NLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSL 120
Query: 115 KQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMD 174
KQPG RD IQCFIKRDKSKLT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEYIISMD
Sbjct: 121 KQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMD 180
Query: 175 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYN---NAQLSPPGRSRRFNSKKVSPKVP 231
ADNISRSS++Y+GKLRSNFLGTKF++YDTQPP N +A ++ RF+S++VSPKVP
Sbjct: 181 ADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVP 240
Query: 232 SGSYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELL---PRALEDSF 288
SGSYNIAQ+TYELNVLGTRGPRRM+C M+SIP SSL+ GGSVP +PE L P +L+DSF
Sbjct: 241 SGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 300
Query: 289 RS-ISFARSI--DNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWC 345
RS ISF++S S +FSS+RFS+ +G ++ EEE RPL+LKNK PRWHEQLQCWC
Sbjct: 301 RSNISFSKSSFDHRSLDFSSSRFSE-MGISCDDNEEEASFRPLILKNKQPRWHEQLQCWC 359
Query: 346 LNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPP-SDPDKIILQFGKVGKD 404
LNFRGRVTVASVKNFQL+AA QP G TG AAP S P + DK+ILQFGKVGKD
Sbjct: 360 LNFRGRVTVASVKNFQLVAARQPQPQG----TGAAAAPTSAPAHPEQDKVILQFGKVGKD 415
Query: 405 MFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
MFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 416 MFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
>emb|CAB53492.1| CAA303719.1 protein [Oryza sativa]
Length = 462
Score = 608 bits (1568), Expect = e-172
Identities = 322/462 (69%), Positives = 367/462 (78%), Gaps = 28/462 (6%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHS---RSKSRSSVHELHDQPLVIQSSRWASLP 57
MSFRSIVRD RD FG+LS+RSF+V + G S R KS EL D P+V Q S+WA LP
Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLP 60
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
PELLRDV+KRLE ++S WP RK VVACA+VC +WR+MCK+IV +PEFCGK+TFPVSLKQP
Sbjct: 61 PELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQP 120
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RDG IQCFIKRDKSKLTYHL+LCLS A+L E GKFLLSAKR+RRTT T+YIISMD+ N
Sbjct: 121 GPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKN 180
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGR-SRRFNSKKVSPKVPSGSYN 236
ISRSSS YIGKLRSNFLGTKFIIYDTQPPYN L R SRRF+S+KVSPKVP+G Y
Sbjct: 181 ISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTGCYP 240
Query: 237 IAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKP-ELLPRALEDSFRSISFAR 295
I QV YELNVLGTRGPRRM C MHSIPAS+++ GG VPG+P ELLPR E+SFRS++ +
Sbjct: 241 IVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSF 300
Query: 296 S----IDNSTEFSSARFSDIIGAG--NEEEEEEG----KERPLVLKNKSPRWHEQLQCWC 345
S D+ST+FSS+RFS+ G +E+E++G KERPLVL+NK+PRWHEQLQCWC
Sbjct: 301 SKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWC 360
Query: 346 LNFRGRVTVASVKNFQLIAAT-QPASGGGAPPTGTGAA-----PPSQP-------PSDPD 392
LNFRGRVTVASVKNFQLIAA QPASG + P+ G A PSQP S+ D
Sbjct: 361 LNFRGRVTVASVKNFQLIAAAPQPASGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHD 420
Query: 393 KIILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
+ILQFGKV KDMFTMDYRYPLSAFQAFAICLTSFDTKLACE
Sbjct: 421 TVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>ref|XP_474442.1| OSJNBa0039K24.2 [Oryza sativa (japonica cultivar-group)]
gi|32480039|emb|CAE01783.1| OSJNBa0039K24.2 [Oryza
sativa (japonica cultivar-group)]
Length = 462
Score = 607 bits (1565), Expect = e-172
Identities = 321/462 (69%), Positives = 367/462 (78%), Gaps = 28/462 (6%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHS---RSKSRSSVHELHDQPLVIQSSRWASLP 57
MSFRSIVRD RD FG+LS+RSF+V + G S R KS EL D P+V Q S+WA LP
Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLP 60
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
PELLRDV+KRLE ++S WP RK VVACA+VC +WR+MCK+IV +PEFCGK+TFPVSLKQP
Sbjct: 61 PELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQP 120
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RDG IQCFIKRDKSKLTYHL+LCLS A+L E GKFLLSAKR+RRTT T+YIISMD+ N
Sbjct: 121 GPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKN 180
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGR-SRRFNSKKVSPKVPSGSYN 236
ISRSSS YIGKLRSNFLGTKFIIYDTQPPYN L R SRRF+S+KVSPKVP+G Y
Sbjct: 181 ISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTGCYP 240
Query: 237 IAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKP-ELLPRALEDSFRSISFAR 295
I QV YELNVLGTRGPRRM C MHSIPAS+++ GG VPG+P ELLPR E+SFRS++ +
Sbjct: 241 IVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSF 300
Query: 296 S----IDNSTEFSSARFSDIIGAG--NEEEEEEG----KERPLVLKNKSPRWHEQLQCWC 345
S D+ST+FSS+RFS+ G +E+E++G KERPLVL+NK+PRWHEQLQCWC
Sbjct: 301 SKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWC 360
Query: 346 LNFRGRVTVASVKNFQLIAAT-QPASGGGAPPTGTGAA-----PPSQP-------PSDPD 392
LNFRGRVTVASVKNFQLIAA QP+SG + P+ G A PSQP S+ D
Sbjct: 361 LNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHD 420
Query: 393 KIILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
+ILQFGKV KDMFTMDYRYPLSAFQAFAICLTSFDTKLACE
Sbjct: 421 TVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>ref|XP_479670.1| putative chain A, C-terminal domain of mouse brain tubby protein
[Oryza sativa (japonica cultivar-group)]
gi|51963694|ref|XP_506618.1| PREDICTED P0015C07.29 gene
product [Oryza sativa (japonica cultivar-group)]
gi|50725706|dbj|BAD33172.1| putative chain A, C-terminal
domain of mouse brain tubby protein [Oryza sativa
(japonica cultivar-group)]
Length = 451
Score = 601 bits (1549), Expect = e-170
Identities = 312/451 (69%), Positives = 355/451 (78%), Gaps = 17/451 (3%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVI------LPGHSRSKSRSSVHELHDQPLVIQSSRWA 54
MSFRSIVRDVRD FGSLSRRSF+V L GH R KS S+ EL D+P+V+ SRW
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWV 60
Query: 55 SLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSL 114
LPPELLRDV+KRLE ES WP RK VVACAAVC++WRE+CK+IV SPE CGK+TFPVSL
Sbjct: 61 GLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSL 120
Query: 115 KQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMD 174
KQPG RDG IQCFIKRDKSKLTY+L+LCLSPA+L ENGKFLL+AKR RR T TEYIIS+D
Sbjct: 121 KQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVD 180
Query: 175 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQL-SPPGRSRRFNSKKVSPKVPSG 233
+ NISRSS+ Y+GK+RSNFLGTKF++YDTQPPYN L S SRR +S++VSPK+P+G
Sbjct: 181 SKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTG 240
Query: 234 SYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPE-LLPRALEDSFRSIS 292
SY IA V YELNVLGTRGPRRM CTMHSIPAS++D G VPG+PE LLP E+SFRS +
Sbjct: 241 SYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTN 300
Query: 293 FARS---IDNSTEFSSARFSDIIGAGNEEEEE---EGKERPLVLKNKSPRWHEQLQCWCL 346
+ +D S +FSS+RFS+I G+ N++ E+ E KERPLVL+NK PRWHEQLQCWCL
Sbjct: 301 TSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCL 360
Query: 347 NFRGRVTVASVKNFQLIAATQPASG---GGAPPTGTGAAPPSQPPSDPDKIILQFGKVGK 403
NFRGRVTVASVKNFQLIAA S A S SD K+ILQFGKVGK
Sbjct: 361 NFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGK 420
Query: 404 DMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
DMFTMDYRYPLSAFQAFAICLTSFDTKLACE
Sbjct: 421 DMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
>gb|AAX95106.1| Tub family, putative [Oryza sativa (japonica cultivar-group)]
Length = 440
Score = 590 bits (1522), Expect = e-167
Identities = 301/445 (67%), Positives = 355/445 (79%), Gaps = 16/445 (3%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLPPEL 60
MSFRSIVRDVRDGFGSLSRR F+V + GH R KS +VHELHD VIQSS WASLPPEL
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRILGHRRGKSHGAVHELHDPVPVIQSSCWASLPPEL 60
Query: 61 LRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYR 120
LRD+I+RLE +E+ WP RKHVVACA VC++WREMCKEIV +PE CGKITFP+SL+QPG R
Sbjct: 61 LRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPR 120
Query: 121 DGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISR 180
DG +QCFI+RDKS TY+L+L L A+LV+NGKFLLSAKR TCTEY+ISM+A+N+SR
Sbjct: 121 DGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSR 180
Query: 181 SSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQV 240
S++T IGKLRSNFLGTKF+IYDT PYN S G++ R S K + K P +Y+IA +
Sbjct: 181 STNTNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANI 240
Query: 241 TYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPE-LLPRAL-EDSFRSISFARS-- 296
+YELNV GTRGPRRM C MHSIPASSL+ GG+VP +P+ +L +L E SFRS+SF++S
Sbjct: 241 SYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSV 300
Query: 297 IDNSTEFSSARFSDI-------IGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFR 349
+D+S FSSA+FSDI IG ++EE KE PL+L+NK+PRWHEQLQCWCLNFR
Sbjct: 301 MDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFR 360
Query: 350 GRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMD 409
GRVTVASVKNFQLIAATQPA+G PT + PP PP + DK+ILQFGKV KDMFTMD
Sbjct: 361 GRVTVASVKNFQLIAATQPAAGA---PTPSQPVPP--PPPEHDKVILQFGKVAKDMFTMD 415
Query: 410 YRYPLSAFQAFAICLTSFDTKLACE 434
Y YPLSAFQAFAI L+SFDTKLACE
Sbjct: 416 YHYPLSAFQAFAISLSSFDTKLACE 440
>gb|AAM67505.1| unknown protein [Arabidopsis thaliana] gi|18176058|gb|AAL59976.1|
unknown protein [Arabidopsis thaliana]
gi|18400968|ref|NP_564485.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
gi|15983382|gb|AAL11559.1| At1g43640/T10P12_16
[Arabidopsis thaliana] gi|37542294|gb|AAL03977.1|
tubby-like protein 5 [Arabidopsis thaliana]
Length = 429
Score = 582 bits (1499), Expect = e-164
Identities = 301/442 (68%), Positives = 352/442 (79%), Gaps = 21/442 (4%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPG---HSRSKSRSSVHELHDQPLVIQSSRWASLP 57
MSF SIVRDVRD GS SRRSFDV + H RSKS + D +VI+++RWA+LP
Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDL-IVIKNTRWANLP 59
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
LLRDV+K+L+ +ES WP RK VVACA VCK+WR MCK+IV SPEF GK+TFPVSLKQP
Sbjct: 60 AALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQP 119
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RDG IQC+IKRDKS +TYHL+L LSPA+LVE+GKFLLSAKR+RR T TEY+ISMDADN
Sbjct: 120 GPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADN 179
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQ-LSPPGRSRRFNSKKVSPKVPSGSYN 236
ISRSSSTYIGKL+SNFLGTKFI+YDT P YN++Q LSPP RSR FNSKKVSPKVPSGSYN
Sbjct: 180 ISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKVPSGSYN 239
Query: 237 IAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARS 296
IAQVTYELN+LGTRGPRRMNC MHSIP+ +L+ GG+VP +PE L R+L++SFRSI ++
Sbjct: 240 IAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSKI 299
Query: 297 IDNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVAS 356
+++S +F+ +EEEGK RPLVLK K PRW + L+CWCLNF+GRVTVAS
Sbjct: 300 VNHSGDFT------------RPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVAS 347
Query: 357 VKNFQLIAA--TQPASG--GGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRY 412
VKNFQL++A QP SG GGA T +P S+ DKIIL FGKVGKDMFTMDYRY
Sbjct: 348 VKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRY 407
Query: 413 PLSAFQAFAICLTSFDTKLACE 434
PLSAFQAFAI L++FDTKLACE
Sbjct: 408 PLSAFQAFAISLSTFDTKLACE 429
>gb|AAN46232.1| unknown protein [Arabidopsis thaliana]
Length = 415
Score = 556 bits (1434), Expect = e-157
Identities = 292/420 (69%), Positives = 336/420 (79%), Gaps = 21/420 (5%)
Query: 18 SRRSFDVILPGHSRSKSRSSVHELHDQ------PLVIQSSRWASLPPELLRDVIKRLETN 71
SRRSFD L + K++ S + P+++Q+SRWA+LPPELL DVIKRLE +
Sbjct: 1 SRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEES 60
Query: 72 ESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYRDGPIQCFIKRD 131
ES WP RKHVVACA+VC+SWR MC+EIV PE CGKITFPVSLKQPG RD IQCFIKRD
Sbjct: 61 ESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKITFPVSLKQPGPRDAMIQCFIKRD 120
Query: 132 KSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISRSSSTYIGKLRS 191
KSKLT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEYIISMDADNISRSS++Y+GKLRS
Sbjct: 121 KSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRS 180
Query: 192 NFLGTKFIIYDTQPPYN---NAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQVTYELNVLG 248
NFLGTKF++YDTQPP N +A ++ RF+S++VSPKVPSGSYNIAQ+TYELNVLG
Sbjct: 181 NFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNVLG 240
Query: 249 TRGPRRMNCTMHSIPASSLDLGGSVPGKPELL---PRALEDSFRS-ISFARSI--DNSTE 302
TRGPRRM+C M+SIP SSL+ GGSVP +PE L P +L+DSFRS ISF++S S +
Sbjct: 241 TRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLD 300
Query: 303 FSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQL 362
FSS+RFS+ +G ++ EEE RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL
Sbjct: 301 FSSSRFSE-MGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQL 359
Query: 363 IAATQPASGGGAPPTGTGAAPPSQPP-SDPDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 421
+AA QP G TG AAP S P + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 360 VAARQPQPQG----TGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 415
>gb|AAN46231.1| unknown protein [Arabidopsis thaliana] gi|28188609|gb|AAN46230.1|
unknown protein [Arabidopsis thaliana]
gi|28188607|gb|AAN46229.1| unknown protein [Arabidopsis
thaliana] gi|28188605|gb|AAN46228.1| unknown protein
[Arabidopsis thaliana] gi|28188603|gb|AAN46227.1|
unknown protein [Arabidopsis thaliana]
gi|28188601|gb|AAN46226.1| unknown protein [Arabidopsis
thaliana] gi|28188599|gb|AAN46225.1| unknown protein
[Arabidopsis thaliana] gi|28188597|gb|AAN46224.1|
unknown protein [Arabidopsis thaliana]
gi|28188595|gb|AAN46223.1| unknown protein [Arabidopsis
thaliana]
Length = 415
Score = 556 bits (1432), Expect = e-157
Identities = 291/420 (69%), Positives = 336/420 (79%), Gaps = 21/420 (5%)
Query: 18 SRRSFDVILPGHSRSKSRSSVHELHDQ------PLVIQSSRWASLPPELLRDVIKRLETN 71
SRRSFD L + K++ S + P+++Q+SRWA+LPPELL DVIKRLE +
Sbjct: 1 SRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEES 60
Query: 72 ESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYRDGPIQCFIKRD 131
ES WP RKHVVACA+VC+SWR MC+EIV PE CGK+TFPVSLKQPG RD IQCFIKRD
Sbjct: 61 ESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRD 120
Query: 132 KSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISRSSSTYIGKLRS 191
KSKLT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEYIISMDADNISRSS++Y+GKLRS
Sbjct: 121 KSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRS 180
Query: 192 NFLGTKFIIYDTQPPYN---NAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQVTYELNVLG 248
NFLGTKF++YDTQPP N +A ++ RF+S++VSPKVPSGSYNIAQ+TYELNVLG
Sbjct: 181 NFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNVLG 240
Query: 249 TRGPRRMNCTMHSIPASSLDLGGSVPGKPELL---PRALEDSFRS-ISFARSI--DNSTE 302
TRGPRRM+C M+SIP SSL+ GGSVP +PE L P +L+DSFRS ISF++S S +
Sbjct: 241 TRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLD 300
Query: 303 FSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQL 362
FSS+RFS+ +G ++ EEE RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL
Sbjct: 301 FSSSRFSE-MGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQL 359
Query: 363 IAATQPASGGGAPPTGTGAAPPSQPP-SDPDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 421
+AA QP G TG AAP S P + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 360 VAARQPQPQG----TGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 415
>gb|AAN46233.1| unknown protein [Arabidopsis thaliana]
Length = 415
Score = 554 bits (1428), Expect = e-156
Identities = 290/420 (69%), Positives = 336/420 (79%), Gaps = 21/420 (5%)
Query: 18 SRRSFDVILPGHSRSKSRSSVHELHDQ------PLVIQSSRWASLPPELLRDVIKRLETN 71
SRRSFD L + K++ S + P+++Q+SRWA+LPPELL DVIKRLE +
Sbjct: 1 SRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEES 60
Query: 72 ESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYRDGPIQCFIKRD 131
ES WP RKHVVACA+VC+SWR MC+EIV PE CGK+TFPVSLKQPG RD IQCFIKRD
Sbjct: 61 ESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRD 120
Query: 132 KSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISRSSSTYIGKLRS 191
KSKLT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEYIISMDADNISRSS++Y+GKLRS
Sbjct: 121 KSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRS 180
Query: 192 NFLGTKFIIYDTQPPYN---NAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQVTYELNVLG 248
NFLGTKF++YDTQPP N +A ++ RF+S++VSPKVPSGS+NIAQ+TYELNVLG
Sbjct: 181 NFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSFNIAQITYELNVLG 240
Query: 249 TRGPRRMNCTMHSIPASSLDLGGSVPGKPELL---PRALEDSFRS-ISFARSI--DNSTE 302
TRGPRRM+C M+SIP SSL+ GGSVP +PE L P +L+DSFRS ISF++S S +
Sbjct: 241 TRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLD 300
Query: 303 FSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQL 362
FSS+RFS+ +G ++ EEE RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL
Sbjct: 301 FSSSRFSE-MGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQL 359
Query: 363 IAATQPASGGGAPPTGTGAAPPSQPP-SDPDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 421
+AA QP G TG AAP S P + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 360 VAARQPQPQG----TGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 415
>gb|AAN46237.1| unknown protein [Arabidopsis lyrata] gi|28188621|gb|AAN46236.1|
unknown protein [Arabidopsis lyrata]
gi|28188619|gb|AAN46235.1| unknown protein [Arabidopsis
lyrata] gi|28188617|gb|AAN46234.1| unknown protein
[Arabidopsis lyrata]
Length = 413
Score = 550 bits (1417), Expect = e-155
Identities = 288/420 (68%), Positives = 334/420 (78%), Gaps = 23/420 (5%)
Query: 18 SRRSFDVILPGHSRSKSRSSVHELHDQ------PLVIQSSRWASLPPELLRDVIKRLETN 71
SRRSFD L + K++ S + P+++Q+SRWA+LPPELL DVIKRLE +
Sbjct: 1 SRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEES 60
Query: 72 ESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYRDGPIQCFIKRD 131
ES WP RKHVVACA+VC+SWR MC+EIV PE CGK+TFPVSLKQPG RD IQCFIKRD
Sbjct: 61 ESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRD 120
Query: 132 KSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISRSSSTYIGKLRS 191
KSKLT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEYIISMDADNISRSS++Y+GKLRS
Sbjct: 121 KSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRS 180
Query: 192 NFLGTKFIIYDTQPPYN---NAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQVTYELNVLG 248
NFLGTKF++YDTQPP N +A ++ RF+S++VSPKVPSGSYNIAQ+TYELNVLG
Sbjct: 181 NFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNVLG 240
Query: 249 TRGPRRMNCTMHSIPASSLDLGGSVPGKPELL---PRALEDSFRS-ISFARSI--DNSTE 302
TRGPRRM+C M+SIP SSL+ GGSVP +PE L P +L+DSFRS ISF++S S +
Sbjct: 241 TRGPRRMHCIMNSIPTSSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLD 300
Query: 303 FSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQL 362
FSS+RFS+ +G + EEE RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQL
Sbjct: 301 FSSSRFSE-MGISCNDNEEETSFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQL 359
Query: 363 IAATQPASGGGAPPTGTGAAPPSQPP-SDPDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 421
+AA + P GTG AP + P + DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 360 VAARP------SQPQGTGTAPATAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 413
>dbj|BAA82866.1| tubby-like protein [Lemna paucicostata]
Length = 428
Score = 529 bits (1362), Expect = e-149
Identities = 296/448 (66%), Positives = 331/448 (73%), Gaps = 34/448 (7%)
Query: 1 MSFRSIVRDVRDGFGSLSRR-SFDVILPGHS---RSKSRSSVH----ELHDQPLVIQSSR 52
MSFRSI+ DVRD GS SRR +V + G S R ++R + E+ + I SR
Sbjct: 1 MSFRSILSDVRDSIGSFSRRRGAEVRISGVSDNHRGRNRVTAGDFPGEIGGEIPAIYQSR 60
Query: 53 WASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPV 112
WA LPPELLRDVIKRLE +ES+WP RKHVVACAAVC +WREMCKEIV PEFCGK+TFPV
Sbjct: 61 WAGLPPELLRDVIKRLEESESSWPARKHVVACAAVCTAWREMCKEIVSGPEFCGKLTFPV 120
Query: 113 SLKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIIS 172
SLKQPG R+G IQCFIKRDKSK YHLFL LSP L ENGKFLLS +R
Sbjct: 121 SLKQPGPREGTIQCFIKRDKSKSRYHLFLGLSPTLPAENGKFLLSQSASRALPARNTSSP 180
Query: 173 MDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSP-PGR-SRRFNSKKVSPKV 230
+AD+ISRSSSTYIGKLRSNFLGTKFI++DTQPP + + +P GR SRRF S KVSPKV
Sbjct: 181 WNADDISRSSSTYIGKLRSNFLGTKFIMFDTQPPTRHCRPAPSSGRVSRRFYS-KVSPKV 239
Query: 231 PSGSYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPE-LLPRALEDSFR 289
PSG+Y IAQVTYELNVLG RGPRRM+CTM+SIP+S+LD GG VP PE +L R+LEDSFR
Sbjct: 240 PSGNYAIAQVTYELNVLGKRGPRRMHCTMNSIPSSALDAGGRVPAAPERILSRSLEDSFR 299
Query: 290 SISFARSIDNSTEFSSARFSDIIGAGNEEEEEEG---KERPLVLKNKSPRWHEQLQCWCL 346
S+S S + S+RFS+ G EEEEEG K PLVLKNK+PRWHEQLQCWCL
Sbjct: 300 SVSL------SKDLGSSRFSEFGGEMEREEEEEGDRKKSGPLVLKNKAPRWHEQLQCWCL 353
Query: 347 NFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMF 406
NFRGRVTVASVKNFQLIA G A GA S+ DKIILQFGKVGKD F
Sbjct: 354 NFRGRVTVASVKNFQLIA------DGQATAAQAGA-------SEHDKIILQFGKVGKDTF 400
Query: 407 TMDYRYPLSAFQAFAICLTSFDTKLACE 434
TMD RYPLSAFQAFAICL+SFDTKLACE
Sbjct: 401 TMDNRYPLSAFQAFAICLSSFDTKLACE 428
>gb|AAD39275.1| Hypothetical protein [Arabidopsis thaliana] gi|25405122|pir||F96499
hypothetical protein T10P12.9 [imported] - Arabidopsis
thaliana
Length = 415
Score = 506 bits (1302), Expect = e-142
Identities = 274/442 (61%), Positives = 328/442 (73%), Gaps = 35/442 (7%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPG---HSRSKSRSSVHELHDQPLVIQSSRWASLP 57
MSF SIVRDVRD GS SRRSFDV + H RSKS + D +VI+++RWA+LP
Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDL-IVIKNTRWANLP 59
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
LLRDV+K+L+ +ES WP R SW + + + I + + +P
Sbjct: 60 AALLRDVMKKLDESESTWPAR-----------SW---FRYSLLPFDIMSVILTTLLMVKP 105
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RDG IQC+IKRDKS +TYHL+L LSPA+LVE+GKFLLSAKR+RR T TEY+ISMDADN
Sbjct: 106 GPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADN 165
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQ-LSPPGRSRRFNSKKVSPKVPSGSYN 236
ISRSSSTYIGKL+SNFLGTKFI+YDT P YN++Q LSPP RSR FNSKKVSPKVPSGSYN
Sbjct: 166 ISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKVPSGSYN 225
Query: 237 IAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARS 296
IAQVTYELN+LGTRGPRRMNC MHSIP+ +L+ GG+VP +PE L R+L++SFRSI ++
Sbjct: 226 IAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSKI 285
Query: 297 IDNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVAS 356
+++S +F+ +EEEGK RPLVLK K PRW + L+CWCLNF+GRVTVAS
Sbjct: 286 VNHSGDFT------------RPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVAS 333
Query: 357 VKNFQLIAA--TQPASG--GGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRY 412
VKNFQL++A QP SG GGA T +P S+ DKIIL FGKVGKDMFTMDYRY
Sbjct: 334 VKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRY 393
Query: 413 PLSAFQAFAICLTSFDTKLACE 434
PLSAFQAFAI L++FDTKLACE
Sbjct: 394 PLSAFQAFAISLSTFDTKLACE 415
>gb|AAM20254.1| putative tubby protein [Arabidopsis thaliana]
gi|18377640|gb|AAL66970.1| putative tubby protein
[Arabidopsis thaliana] gi|27372514|gb|AAK98802.1|
tubby-like protein 3 [Arabidopsis thaliana]
gi|30690823|ref|NP_850481.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
Length = 406
Score = 458 bits (1178), Expect = e-127
Identities = 235/434 (54%), Positives = 308/434 (70%), Gaps = 28/434 (6%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLPPEL 60
MSF+S+++D+R GS+SR+ FDV G+ RS+S+ V + + S WAS+PPEL
Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRF-GYGRSRSQRVVQDTSVPVDAFKQSCWASMPPEL 59
Query: 61 LRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYR 120
LRDV+ R+E +E WP RK+VV+CA VC++WRE+ KEIV PE K+TFP+SLKQPG R
Sbjct: 60 LRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPR 119
Query: 121 DGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISR 180
+QC+I R++S TY+L+L L+ A ++GKFLL+AKR RR TCT+YIIS++ D++SR
Sbjct: 120 GSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSR 179
Query: 181 SSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQV 240
S+TYIGKLRSNFLGTKF +YD QP Q++ SR + K+VSP++PSG+Y +A +
Sbjct: 180 GSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHI 239
Query: 241 TYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARSIDNS 300
+YELNVLG+RGPRRM C M +IPAS+++ GG+ P + EL+ L DSF S SF RS
Sbjct: 240 SYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNL-DSFPSFSFFRS---- 294
Query: 301 TEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNF 360
S R + + ++EG LVLKNK+PRWHEQLQCWCLNF GRVTVASVKNF
Sbjct: 295 ---KSIRAESLPSGPSSAAQKEGL---LVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNF 348
Query: 361 QLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRYPLSAFQAF 420
QL+AA P +G P + + +ILQFGKVGKD+FTMDY+YP+SAFQAF
Sbjct: 349 QLVAA--PENGPAGP--------------EHENVILQFGKVGKDVFTMDYQYPISAFQAF 392
Query: 421 AICLTSFDTKLACE 434
ICL+SFDTK+ACE
Sbjct: 393 TICLSSFDTKIACE 406
>gb|AAM15124.1| putative tubby protein [Arabidopsis thaliana]
gi|3738302|gb|AAC63644.1| putative tubby protein
[Arabidopsis thaliana] gi|25409071|pir||H84920 probable
Tub family protein [imported] - Arabidopsis thaliana
Length = 407
Score = 454 bits (1168), Expect = e-126
Identities = 235/435 (54%), Positives = 308/435 (70%), Gaps = 29/435 (6%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLPPEL 60
MSF+S+++D+R GS+SR+ FDV G+ RS+S+ V + + S WAS+PPEL
Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRF-GYGRSRSQRVVQDTSVPVDAFKQSCWASMPPEL 59
Query: 61 LRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYR 120
LRDV+ R+E +E WP RK+VV+CA VC++WRE+ KEIV PE K+TFP+SLKQPG R
Sbjct: 60 LRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPR 119
Query: 121 DGPIQCFIKRDKSKLTYHLFLCLSPALLV-ENGKFLLSAKRTRRTTCTEYIISMDADNIS 179
+QC+I R++S TY+L+L L+ A ++GKFLL+AKR RR TCT+YIIS++ D++S
Sbjct: 120 GSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVS 179
Query: 180 RSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQ 239
R S+TYIGKLRSNFLGTKF +YD QP Q++ SR + K+VSP++PSG+Y +A
Sbjct: 180 RGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAH 239
Query: 240 VTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARSIDN 299
++YELNVLG+RGPRRM C M +IPAS+++ GG+ P + EL+ L DSF S SF RS
Sbjct: 240 ISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNL-DSFPSFSFFRS--- 295
Query: 300 STEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKN 359
S R + + ++EG LVLKNK+PRWHEQLQCWCLNF GRVTVASVKN
Sbjct: 296 ----KSIRAESLPSGPSSAAQKEGL---LVLKNKAPRWHEQLQCWCLNFNGRVTVASVKN 348
Query: 360 FQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRYPLSAFQA 419
FQL+AA P +G P + + +ILQFGKVGKD+FTMDY+YP+SAFQA
Sbjct: 349 FQLVAA--PENGPAGP--------------EHENVILQFGKVGKDVFTMDYQYPISAFQA 392
Query: 420 FAICLTSFDTKLACE 434
F ICL+SFDTK+ACE
Sbjct: 393 FTICLSSFDTKIACE 407
>ref|XP_467371.1| putative tubby-like protein [Oryza sativa (japonica
cultivar-group)] gi|41053094|dbj|BAD08037.1| putative
tubby-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 428
Score = 445 bits (1144), Expect = e-123
Identities = 240/451 (53%), Positives = 311/451 (68%), Gaps = 40/451 (8%)
Query: 1 MSFRSIVRDVR---DGFGSLSRRSFDVILPGHSRSKSRSS-------------VHELHDQ 44
MS +SIVR++R DG GS+SRR+ D G R SR S +L Q
Sbjct: 1 MSLKSIVRELREMRDGIGSMSRRAADG-RAGGGRGGSRHSWPVLWSEQQQPPQQQQLQRQ 59
Query: 45 PLVIQSSRWASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEF 104
Q RWA+LPPELL DVI+R+E +E+ WP R+ VVACAAVC+SWRE+ KE+V + E
Sbjct: 60 EHQQQQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEE 119
Query: 105 CGKITFPVSLKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRT 164
CG+ITFP+SLKQPG R+ P+QCF++RD++ TY L+L LSP+L EN K LL+A++ RR
Sbjct: 120 CGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRA 179
Query: 165 TCTEYIISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSK 224
T T ++IS+ +++ S SSSTY+GKL+ NFLGTKF I+D+QPP +A + P R + + K
Sbjct: 180 TRTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPPC-DAVVLPNNRPSKRHFK 238
Query: 225 KVSPKVPSGSYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRAL 284
+VSP++P G+YN+A V+YEL VL RGPRRM CTMHSIPA + GG P P + +L
Sbjct: 239 QVSPRLPLGNYNVATVSYELTVLRNRGPRRMQCTMHSIPALCIQEGGKAP-TPTGIIHSL 297
Query: 285 EDSFRSISFARSIDNSTEFSSARFS-DIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQC 343
++ ++S ++ + + EFSS S D+ G E PLVLKNK+PRWHEQLQC
Sbjct: 298 DEQVPALSTSKGKEPAIEFSSTSLSADLSGPVCTNEV------PLVLKNKAPRWHEQLQC 351
Query: 344 WCLNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGK 403
WCLNFRGRVTVASVKNFQL+A+ P+ G P ++ +K+ILQFGK+GK
Sbjct: 352 WCLNFRGRVTVASVKNFQLVASVDPSLG--------------IPAAEQEKVILQFGKIGK 397
Query: 404 DMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
D+FTMDYRYPLSAFQAFAICLTSFDTK ACE
Sbjct: 398 DIFTMDYRYPLSAFQAFAICLTSFDTKPACE 428
>ref|NP_910978.1| putative tubby related protein [Oryza sativa (japonica
cultivar-group)] gi|51963628|ref|XP_506548.1| PREDICTED
P0450A04.117 gene product [Oryza sativa (japonica
cultivar-group)] gi|23495868|dbj|BAC20077.1| putative
tubby related protein [Oryza sativa (japonica
cultivar-group)]
Length = 406
Score = 432 bits (1111), Expect = e-119
Identities = 224/437 (51%), Positives = 305/437 (69%), Gaps = 34/437 (7%)
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVH---ELHDQPLVIQSSRWASLP 57
MSFRS++++V+ G++SRR F PG R + ++ E LV++ S W LP
Sbjct: 1 MSFRSVIQEVKGEIGAISRRGFRS-RPGRVRRVAAAAEEPPDESSAAALVMRESCWTQLP 59
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
PELLR+V+ R+E +E WP R+ VVACA VC+SWR + +EIV +PE G +TFP+SLKQP
Sbjct: 60 PELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQP 119
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RD P++CFI R+++ TY+L++ L+ AL ++GKFLL+A++ RRTTCTEY+IS+D ++
Sbjct: 120 GPRDAPMKCFIVRNRTTQTYYLYIGLTDAL-TDDGKFLLAARKCRRTTCTEYLISLDMND 178
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNI 237
IS+ + +Y+GKLRSNFLGTKF IYD PPY +S +R S +SP++P+G+Y +
Sbjct: 179 ISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPV 238
Query: 238 AQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARSI 297
+ ++YELNVLG+RGPRRM+C M SIP S+++ GG+ P + E P + +SF SI F +S
Sbjct: 239 SHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE-FPLSYHESFTSIPFFKS- 296
Query: 298 DNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASV 357
S +++ S + G++ LVLKNKSPRWHE LQCWCLNF GRVTVASV
Sbjct: 297 -KSVRANNSTASLLTQNGSK----------LVLKNKSPRWHEHLQCWCLNFHGRVTVASV 345
Query: 358 KNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRYPLSAF 417
KNFQL+A+ + + PT + D +ILQFGKVGKDMFTMDYRYP+SAF
Sbjct: 346 KNFQLVASDE------SNPTN----------QEHDDVILQFGKVGKDMFTMDYRYPISAF 389
Query: 418 QAFAICLTSFDTKLACE 434
QAFAICL+SFDTK+ACE
Sbjct: 390 QAFAICLSSFDTKIACE 406
>emb|CAB88665.1| tubby-like protein [Cicer arietinum]
Length = 411
Score = 422 bits (1085), Expect = e-116
Identities = 224/437 (51%), Positives = 298/437 (67%), Gaps = 29/437 (6%)
Query: 1 MSFRSIVRD---VRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLP 57
M ++IVR+ +++G GS S+R D H +S+S V IQ +WASLP
Sbjct: 1 MPLKNIVREFKGMKNGIGSKSKRGGD---SKHWLCRSKSHVAPDVTPFEPIQQGQWASLP 57
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
PELL D+I+R+E +E++WP R VV CA+VCKSWR + KEI+ +P+ CG+ITFP+SLKQP
Sbjct: 58 PELLLDIIRRVEESETSWPARAVVVFCASVCKSWRSVTKEIIKTPQQCGRITFPISLKQP 117
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RD PIQCFI+R++ T+ L+L L P+ E+ K LL A++ RR T TE +IS+ AD+
Sbjct: 118 GPRDCPIQCFIRRNRESSTFLLYLGLVPS-EHESNKLLLVARKIRRATGTEIVISLAADD 176
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNI 237
SR+S+ Y+GKLRSNF GTKF IYD+QPP+ + + P R +FNSK+VSP+ P+ SY +
Sbjct: 177 FSRASNNYVGKLRSNFWGTKFTIYDSQPPH-DIIVQPNCRGGKFNSKQVSPRAPACSYLV 235
Query: 238 AQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARSI 297
+ ++YELN L TRGPRRM+C M+SIP S+++ GG+ P P LLP+ ++ F +
Sbjct: 236 SSISYELNTLWTRGPRRMHCVMNSIPVSAIEEGGNAP-TPTLLPQIFDEPFSPSPALKGK 294
Query: 298 DNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASV 357
T+ S S++ E +G PLVLKNK+PRWHEQLQCWCLNF GRVTVASV
Sbjct: 295 SPMTDSYSGNLSEL------PELSQGSVEPLVLKNKAPRWHEQLQCWCLNFVGRVTVASV 348
Query: 358 KNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRYPLSAF 417
KNFQL+AA P+ + + +++ILQFGK+GKD+FTMDY YPLSAF
Sbjct: 349 KNFQLVAAVDPSHNVSS--------------EEQERVILQFGKIGKDIFTMDYSYPLSAF 394
Query: 418 QAFAICLTSFDTKLACE 434
QAFAICLTSFDTK ACE
Sbjct: 395 QAFAICLTSFDTKPACE 411
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 795,144,386
Number of Sequences: 2540612
Number of extensions: 35957690
Number of successful extensions: 121067
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 120474
Number of HSP's gapped (non-prelim): 312
length of query: 434
length of database: 863,360,394
effective HSP length: 131
effective length of query: 303
effective length of database: 530,540,222
effective search space: 160753687266
effective search space used: 160753687266
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0052b.11