BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0051b.10
(187 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK06864.1| auxin response factor 4 [Arabidopsis thaliana] gi... 259 2e-68
dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus] 255 4e-67
gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum] 223 3e-57
gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum] 220 2e-56
ref|NP_916845.1| auxin response transcription factor 3-like prot... 219 3e-56
gb|AAT77393.1| putative ETTIN protein [Oryza sativa (japonica cu... 219 4e-56
gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum] 214 1e-54
ref|NP_916153.1| putative auxin response transcription factor [O... 211 1e-53
dbj|BAD87282.1| putative ETTIN protein [Oryza sativa (japonica c... 211 1e-53
gb|AAG53998.1| auxin response transcription factor 3 [Arabidopsi... 207 2e-52
gb|AAC23589.1| ETTIN [Arabidopsis thaliana] 207 2e-52
gb|AAB62404.1| auxin response transcription factor 3; ARF3 [Arab... 207 2e-52
emb|CAC83756.1| auxin response factor 1 [Oryza sativa (japonica ... 200 2e-50
gb|AAG43286.2| putative auxin response factor 1 [Oryza sativa (i... 199 3e-50
gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza ... 198 6e-50
ref|NP_914881.1| auxin response factor 2 [Oryza sativa (japonica... 198 7e-50
dbj|BAD88200.1| putative auxin response factor [Oryza sativa (ja... 198 7e-50
gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana] gi|1419... 196 2e-49
gb|AAN31923.1| auxin response factor [Arabidopsis thaliana] gi|6... 196 2e-49
dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana] 196 2e-49
>gb|AAK06864.1| auxin response factor 4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4
[Arabidopsis thaliana] gi|19424051|gb|AAL87308.1| auxin
response factor ARF4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4
[Arabidopsis thaliana] gi|15239335|ref|NP_200853.1|
auxin-responsive factor (ARF4) [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9|ARFD_ARATH Auxin response factor 4
gi|4102598|gb|AAD01512.1| auxin response factor 4
[Arabidopsis thaliana]
Length = 788
Score = 259 bits (663), Expect = 2e-68
Identities = 127/165 (76%), Positives = 141/165 (84%), Gaps = 1/165 (0%)
Query: 2 TSHMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHI 61
T HMFCKTLTA DT TH GFSVPRRAAEDC PLDYKQQRPSQEL+AKDLHGVEWKF HI
Sbjct: 173 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHI 232
Query: 62 YRG*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGN 121
YRG PR HLLTTGWSIFVSQ NLVSGDAV FLR E GELRLGIRR+ PRNGLP+S +
Sbjct: 233 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSII-E 291
Query: 122 QNSYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSI 166
+NS +ILS+VAN +ST+SMFHVFYSPRA++++FV PY+KY SI
Sbjct: 292 KNSCSNILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI 336
>dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 255 bits (652), Expect = 4e-67
Identities = 125/168 (74%), Positives = 139/168 (82%)
Query: 1 STSHMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCH 60
ST HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY Q RPSQEL+AKDLHGVEW+F H
Sbjct: 164 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRH 223
Query: 61 IYRG*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVG 120
IYRG PR HLLTTGWSIFVSQ NL+SGDAV FLRGENGELRLGIRR+V PRNGLP+S VG
Sbjct: 224 IYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVG 283
Query: 121 NQNSYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHD 168
NQNS + L+ V IST+S F VFY+PRA ++ F+ QKY KSI++
Sbjct: 284 NQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINN 331
>gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 223 bits (567), Expect = 3e-57
Identities = 108/162 (66%), Positives = 127/162 (77%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY QQRP QELVAKDLHG EWKF HIYR
Sbjct: 87 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPCQELVAKDLHGTEWKFRHIYR 146
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS FV++ LVSGDAV FLRG++GELRLG+RR+V +NG + +Q
Sbjct: 147 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQC 206
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKS 165
S L+ VA+ ++T+SMF +FY+PR S S+F+ PY K+ KS
Sbjct: 207 SNLGTLANVAHAVATKSMFQIFYNPRLSQSEFIVPYWKFTKS 248
>gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 220 bits (560), Expect = 2e-56
Identities = 105/164 (64%), Positives = 128/164 (78%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY+Q RPSQELVAKDLHG +W+F HIYR
Sbjct: 9 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYR 68
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS FV++ LVSGDAV FLRG++GELRLG+RR++ +N + +
Sbjct: 69 GQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNS 128
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIH 167
S H LS VAN + RS+FH+ Y+PRA+ S+F+ PY K+ KS++
Sbjct: 129 SKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLN 172
>ref|NP_916845.1| auxin response transcription factor 3-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 729
Score = 219 bits (558), Expect = 3e-56
Identities = 104/162 (64%), Positives = 125/162 (76%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY QRP QELVAKDLHG EW+F HIYR
Sbjct: 145 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYR 204
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS F+++ LVSGDAV FLRGE+GELRLG+RR+ +N P + NQ
Sbjct: 205 GQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQI 264
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKS 165
S LS VA+ ++ +S+FH++Y+PR S S+F+ PY K+ +S
Sbjct: 265 SNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS 306
>gb|AAT77393.1| putative ETTIN protein [Oryza sativa (japonica cultivar-group)]
Length = 719
Score = 219 bits (557), Expect = 4e-56
Identities = 105/163 (64%), Positives = 127/163 (77%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY QQRPSQELVAKDLH EW+F HIYR
Sbjct: 140 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYR 199
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS FV++ LVSGDAV FLRG++GELRLG+RR+ +NG + NQ
Sbjct: 200 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQC 259
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSI 166
S L+ VA+ ++T S+F+++Y+PR S S+F+ PY K+ KS+
Sbjct: 260 SNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSL 302
>gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 214 bits (544), Expect = 1e-54
Identities = 102/162 (62%), Positives = 124/162 (75%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY QRPSQELVAKDLHG EW+F HIYR
Sbjct: 98 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEWRFRHIYR 157
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS FV++ LVSGDAV FLRGE+G L+LG+RR+ +N P + NQ+
Sbjct: 158 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVSPFPALFNQD 217
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKS 165
S L VA+ ++ +S+FH++Y+PR S+F+ PY K+ +S
Sbjct: 218 SSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRS 259
>ref|NP_916153.1| putative auxin response transcription factor [Oryza sativa
(japonica cultivar-group)]
Length = 585
Score = 211 bits (536), Expect = 1e-53
Identities = 102/164 (62%), Positives = 125/164 (76%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLD+KQ RPSQELVAKDLHG +W+F HIYR
Sbjct: 132 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYR 191
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS FV++ LVSGDAV FLRG++GELRLG+RR+ +N +++
Sbjct: 192 GQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSES 251
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIH 167
S LS VA+ + S+FH+ Y+PRA+ S++V PY K+ KS +
Sbjct: 252 SKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFN 295
>dbj|BAD87282.1| putative ETTIN protein [Oryza sativa (japonica cultivar-group)]
gi|57899614|dbj|BAD87193.1| putative ETTIN protein
[Oryza sativa (japonica cultivar-group)]
Length = 731
Score = 211 bits (536), Expect = 1e-53
Identities = 102/164 (62%), Positives = 125/164 (76%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
HMFCKTLTA DT TH GFSVPRRAAEDC PPLD+KQ RPSQELVAKDLHG +W+F HIYR
Sbjct: 189 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYR 248
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLLTTGWS FV++ LVSGDAV FLRG++GELRLG+RR+ +N +++
Sbjct: 249 GQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSES 308
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIH 167
S LS VA+ + S+FH+ Y+PRA+ S++V PY K+ KS +
Sbjct: 309 SKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFN 352
>gb|AAG53998.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription
factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1| auxin response transcription
factor 3 (ETTIN/ARF3) [Arabidopsis thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription
factor 3 (ETTIN/ARF3) [Arabidopsis thaliana]
gi|46395605|sp|O23661|ARFC_ARATH Auxin response factor 3
(ETTIN protein) gi|15226178|ref|NP_180942.1|
auxin-responsive factor (ARF3) / ETTIN protein (ETT)
[Arabidopsis thaliana]
Length = 608
Score = 207 bits (526), Expect = 2e-52
Identities = 102/166 (61%), Positives = 124/166 (74%)
Query: 1 STSHMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCH 60
+T HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY Q RPSQEL+A+DLHG+EW+F H
Sbjct: 154 NTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRH 213
Query: 61 IYRG*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVG 120
IYRG PR HLLTTGWS FV++ LVSGDAV FLRG++G+LRLG+RR+ S
Sbjct: 214 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQY 273
Query: 121 NQNSYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSI 166
NQN + S VA+ IST S+F + Y+P+AS S+F+ P K+ K +
Sbjct: 274 NQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV 319
>gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 207 bits (526), Expect = 2e-52
Identities = 102/166 (61%), Positives = 124/166 (74%)
Query: 1 STSHMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCH 60
+T HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY Q RPSQEL+A+DLHG+EW+F H
Sbjct: 154 NTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRH 213
Query: 61 IYRG*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVG 120
IYRG PR HLLTTGWS FV++ LVSGDAV FLRG++G+LRLG+RR+ S
Sbjct: 214 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQY 273
Query: 121 NQNSYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSI 166
NQN + S VA+ IST S+F + Y+P+AS S+F+ P K+ K +
Sbjct: 274 NQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV 319
>gb|AAB62404.1| auxin response transcription factor 3; ARF3 [Arabidopsis thaliana]
Length = 608
Score = 207 bits (526), Expect = 2e-52
Identities = 102/166 (61%), Positives = 124/166 (74%)
Query: 1 STSHMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCH 60
+T HMFCKTLTA DT TH GFSVPRRAAEDC PPLDY Q RPSQEL+A+DLHG+EW+F H
Sbjct: 154 NTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRH 213
Query: 61 IYRG*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVG 120
IYRG PR HLLTTGWS FV++ LVSGDAV FLRG++G+LRLG+RR+ S
Sbjct: 214 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQY 273
Query: 121 NQNSYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSI 166
NQN + S VA+ IST S+F + Y+P+AS S+F+ P K+ K +
Sbjct: 274 NQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV 319
>emb|CAC83756.1| auxin response factor 1 [Oryza sativa (japonica cultivar-group)]
Length = 836
Score = 200 bits (508), Expect = 2e-50
Identities = 92/166 (55%), Positives = 123/166 (73%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
H FCKTLTA DT TH GFSV RR A++CLPPLD +Q P+QELVAKDLHGVEW+F HI+R
Sbjct: 130 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFR 189
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + + +
Sbjct: 190 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHS 249
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+ +L+ + ++T +MF V+Y PR S ++FV PY +Y +S+ N
Sbjct: 250 MHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQN 295
>gb|AAG43286.2| putative auxin response factor 1 [Oryza sativa (indica
cultivar-group)]
Length = 857
Score = 199 bits (506), Expect = 3e-50
Identities = 92/166 (55%), Positives = 123/166 (73%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
H FCKTLTA DT TH GFSV RR A++CLPPLD +Q P+QELVAKDLHGVEW+F HI+R
Sbjct: 146 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFR 205
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + + +
Sbjct: 206 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHS 265
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+ +L+ + ++T +MF V+Y PR S ++FV PY +Y +S+ N
Sbjct: 266 MHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRN 311
>gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 599
Score = 198 bits (504), Expect = 6e-50
Identities = 100/176 (56%), Positives = 124/176 (69%), Gaps = 12/176 (6%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPL------------DYKQQRPSQELVAKDL 51
HMFCKTLTA DT TH GFSVPRRAAEDC PPL DYK RPSQEL+A DL
Sbjct: 31 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVRPSQELIAVDL 90
Query: 52 HGVEWKFCHIYRG*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPR 111
HG +WKF HIYRG PR HLLT GWS FV++ LVSGDAV FLRG++G+LRLG+RR+V R
Sbjct: 91 HGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLR 150
Query: 112 NGLPESTVGNQNSYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIH 167
N V + +S ILS VA+ + +S+FH+ ++PR+ S+F+ PY + KS++
Sbjct: 151 NEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLN 206
>ref|NP_914881.1| auxin response factor 2 [Oryza sativa (japonica cultivar-group)]
Length = 826
Score = 198 bits (503), Expect = 7e-50
Identities = 91/164 (55%), Positives = 123/164 (74%)
Query: 6 FCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYRG* 65
FCKTLTA DT TH GFSV RR A++CLPPLD Q P+QELVAKDLH ++W+F HI+RG
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQ 183
Query: 66 PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQNSY 125
PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + +Q+ +
Sbjct: 184 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMH 243
Query: 126 PHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+L+ + I+T+SMF V+Y PR S S+F+ PY +Y +S+ +N
Sbjct: 244 LGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 287
>dbj|BAD88200.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 808
Score = 198 bits (503), Expect = 7e-50
Identities = 91/164 (55%), Positives = 123/164 (74%)
Query: 6 FCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYRG* 65
FCKTLTA DT TH GFSV RR A++CLPPLD Q P+QELVAKDLH ++W+F HI+RG
Sbjct: 129 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQ 188
Query: 66 PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQNSY 125
PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + +Q+ +
Sbjct: 189 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMH 248
Query: 126 PHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+L+ + I+T+SMF V+Y PR S S+F+ PY +Y +S+ +N
Sbjct: 249 LGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 292
>gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
gi|14190369|gb|AAK55665.1| AT5g62000/mtg10_20
[Arabidopsis thaliana]
Length = 678
Score = 196 bits (499), Expect = 2e-49
Identities = 91/166 (54%), Positives = 122/166 (72%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
H FCKTLTA DT TH GFSV RR A++CLPPLD +Q P+QELVAKDLH EW+F HI+R
Sbjct: 162 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFR 221
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + + +
Sbjct: 222 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 281
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+ +L+ + IST +MF V+Y PR S S+F+ P+ +Y +S+ +N
Sbjct: 282 MHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 327
>gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein
[Arabidopsis thaliana] gi|62319913|dbj|BAD93985.1|
ARF1-binding protein [Arabidopsis thaliana]
gi|10176918|dbj|BAB10162.1| auxin response factor-like
protein [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| transcriptional factor B3
family protein / auxin-responsive factor, putative
(ARF1) [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| transcriptional factor B3
family protein / auxin-responsive factor, putative
(ARF1) [Arabidopsis thaliana]
gi|30697610|ref|NP_851244.1| transcriptional factor B3
family protein / auxin-responsive factor, putative
(ARF1) [Arabidopsis thaliana] gi|49616349|gb|AAT67071.1|
ARF2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3|ARFB_ARATH Auxin response factor 2
(ARF1-binding protein) (ARF1-BP)
Length = 859
Score = 196 bits (499), Expect = 2e-49
Identities = 91/166 (54%), Positives = 122/166 (72%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
H FCKTLTA DT TH GFSV RR A++CLPPLD +Q P+QELVAKDLH EW+F HI+R
Sbjct: 162 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFR 221
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + + +
Sbjct: 222 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 281
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+ +L+ + IST +MF V+Y PR S S+F+ P+ +Y +S+ +N
Sbjct: 282 MHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 327
>dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 196 bits (499), Expect = 2e-49
Identities = 91/166 (54%), Positives = 122/166 (72%)
Query: 4 HMFCKTLTAFDTITHRGFSVPRRAAEDCLPPLDYKQQRPSQELVAKDLHGVEWKFCHIYR 63
H FCKTLTA DT TH GFSV RR A++CLPPLD +Q P+QELVAKDLH EW+F HI+R
Sbjct: 162 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFR 221
Query: 64 G*PRWHLLTTGWSIFVSQNNLVSGDAVSFLRGENGELRLGIRRSVGPRNGLPESTVGNQN 123
G PR HLL +GWS+FVS LV+GDA FLRGENGELR+G+RR++ + +P S + + +
Sbjct: 222 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 281
Query: 124 SYPHILSVVANVISTRSMFHVFYSPRASNSDFVFPYQKYAKSIHDN 169
+ +L+ + IST +MF V+Y PR S S+F+ P+ +Y +S+ +N
Sbjct: 282 MHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 327
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.137 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 322,875,135
Number of Sequences: 2540612
Number of extensions: 12446746
Number of successful extensions: 23217
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 23019
Number of HSP's gapped (non-prelim): 170
length of query: 187
length of database: 863,360,394
effective HSP length: 120
effective length of query: 67
effective length of database: 558,486,954
effective search space: 37418625918
effective search space used: 37418625918
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0051b.10