BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0048.9
(1366 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP54617.1| putative non-LTR retroelement reverse transcripta... 812 0.0
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 784 0.0
gb|AAV32224.1| hypothetical protein [Oryza sativa (japonica cult... 730 0.0
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 720 0.0
gb|AAQ19327.1| bZIP-like protein [Oryza sativa (japonica cultiva... 711 0.0
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 703 0.0
gb|AAD03565.2| putative non-LTR retroelement reverse transcripta... 701 0.0
gb|AAG51783.1| reverse transcriptase, putative; 16838-20266 [Ara... 679 0.0
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 669 0.0
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 665 0.0
emb|CAB78094.1| RNA-directed DNA polymerase-like protein [Arabid... 657 0.0
gb|AAP53315.1| putative reverse transcriptase [Oryza sativa (jap... 652 0.0
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 642 0.0
gb|AAX95232.1| retrotransposon protein, putative, unclassified [... 630 e-179
pir||G86379 protein F5A9.24 [imported] - Arabidopsis thaliana gi... 621 e-176
gb|AAF97969.1| F21J9.30 [Arabidopsis thaliana] 613 e-174
ref|XP_475290.1| hypothetical protein [Oryza sativa (japonica cu... 611 e-173
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 604 e-171
pir||G96509 protein F27F5.21 [imported] - Arabidopsis thaliana g... 594 e-168
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 577 e-163
>gb|AAP54617.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa
(japonica cultivar-group)] gi|37536056|ref|NP_922330.1|
putative non-LTR retroelement reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
gi|10140689|gb|AAG13524.1| putative non-LTR retroelement
reverse transcriptase [Oryza sativa (japonica
cultivar-group)]
Length = 1382
Score = 812 bits (2097), Expect = 0.0
Identities = 486/1394 (34%), Positives = 736/1394 (51%), Gaps = 51/1394 (3%)
Query: 7 RLLSW--NCRGLGNLEAVRALRGLIHSQAPDIVFLMETKLFSFEMQRHRGMGGLSNIFPV 64
+L++W NCRGLG+ V LR L+ S P +VFL ETK+ + + G S F V
Sbjct: 5 KLVTWGRNCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGSFAV 64
Query: 65 QCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLKDR 124
C +GGL L W + V++ + H I V+ S P ++ +YG P+ L+
Sbjct: 65 SC-EGLSGGLALFWTTAYTVSLRGFNSHFI--DVLVSTEELPPWRISFVYGEPKRELRHF 121
Query: 125 TWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFS 184
W ++R + PWLC GDFN++L + LG +Q DCGL + F
Sbjct: 122 FWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSCLDDCGLIDLGFV 181
Query: 185 GPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRT 244
GP FTW+N + RLD A+ N + + V ++I SDH + + SRR
Sbjct: 182 GPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDL-SRRN 240
Query: 245 ETQRHRT--RMFRFEEVWLESGEECAEIISEGWSNTNLS------ILSRINLVGRSLDSW 296
QR + FRFE WL + E+ E++ W ++ + S + V SL W
Sbjct: 241 HGQRRIPIQQGFRFEAAWLRA-EDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDW 299
Query: 297 GREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRSRAN 356
+ +G + ++I + L+ L++ + V++ + E+ L L ++EEI+ QRSR +
Sbjct: 300 SKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSRVD 359
Query: 357 WLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPT 416
WL+ GDRNT FFH++A+ RR+ N I+E+ D+G + + I R+ +++ +FS+
Sbjct: 360 WLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEPCD 419
Query: 417 GIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWPIV 476
+EEV + +V D L +T E+++ ALFQM TKAPG DGFPALFYQ W I+
Sbjct: 420 SMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGIL 479
Query: 477 GDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIAN 536
+ I L G+ P + +++VLIPKV A +++RPISLCNV++KI SK +AN
Sbjct: 480 EEHICNAVRGFLLGEEIPEGLCDSVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLAN 539
Query: 537 RMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAYDR 596
R+K L D++SE QSAFVPGRLITD+AL+A+EC H ++K+ ++ ALK+DM KAYDR
Sbjct: 540 RLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQ-HNKNPFFALKIDMMKAYDR 598
Query: 597 VEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYL 656
VEW +L L+ +GF W+N VM CV++V +AV +NG P RG+RQGDP+SPYL
Sbjct: 599 VEWAYLSGCLSKLGFSQDWINTVMRCVSSVRYAVKINGELTKPVVPSRGIRQGDPISPYL 658
Query: 657 FILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKNIL 716
F+LC E S L+ K L GIK R P ISHLLFADDS+ FA+A + + +KN L
Sbjct: 659 FLLCTEGLSCLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALKNTL 718
Query: 717 ATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQ 776
+Y ASGQKINL KS + + P+ + ++ L V D YLG+PT IG + T
Sbjct: 719 RSYCSASGQKINLHKSSIFFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTN 778
Query: 777 IFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMIS 836
F+F+ ER+WK++ GW ++ LSRAG E ++K+VAQAIP+YVMSCF +P +C ++++ I+
Sbjct: 779 FFKFLPERIWKRVNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIA 838
Query: 837 RFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLLGK 896
+WG + K+ +HW W + PK +GG+GFR+F +FN A++ + WR+ PDSL +
Sbjct: 839 DHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSR 898
Query: 897 VFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWLANG 956
V K YF + A + PS+ W +L ++ KG W +G+G ++I+ DNW+
Sbjct: 899 VLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP-- 956
Query: 957 PPVNFRQDVVDELGL----TKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPE 1012
FR +V L V+ LM R W+ LI F A I+ +P+ R +
Sbjct: 957 ---GFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGD 1013
Query: 1013 SDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTL------WKRFWKAPSM 1066
+D W GLYSV++ Y L A + S+ RG+ L WK WK +
Sbjct: 1014 ADFASWPHDKLGLYSVRSAYN-LARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAP 1072
Query: 1067 PRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCW---- 1122
+++ WR L +LR+R + C C D+TV+H+FL C W
Sbjct: 1073 GKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCN-RDDTVEHVFLFCPFAAQIWEEIK 1131
Query: 1123 --FASPMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRFLFAIWEARNK------HIFEE 1174
A +G +++ F + + V + IWEARN + +
Sbjct: 1132 GKCAVKLGRNGFSTMRQWIFDFLKRGSSHANTLLAVT--FWHIWEARNNTKNNNGTVHPQ 1189
Query: 1175 KLFCIAGVLDRAASLVSQSTLPFTLAASQEKDNLKRWRRPAENVVKVNVDAAV-GQDRFA 1233
++ + +L ++ +T + RW+ P +V +N DAA+ R
Sbjct: 1190 RV--VIKILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTM 1247
Query: 1234 GFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCL-LL 1292
G G + RD+ G+ L A ++ V+ P +AEAL++R A+ LA + G + +DCL ++
Sbjct: 1248 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVI 1307
Query: 1293 QQAWKKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVRREGNSCADYLARNASSYPDSVWIE 1352
++ S + +I+D KL F V R N A LARNA +V+
Sbjct: 1308 RRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRS 1367
Query: 1353 EGPPGLSSLLRDDV 1366
P + +L DDV
Sbjct: 1368 VIPDYIRDILCDDV 1381
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25408936|pir||A84888 hypothetical protein
At2g45230 [imported] - Arabidopsis thaliana
Length = 1374
Score = 784 bits (2024), Expect = 0.0
Identities = 463/1368 (33%), Positives = 713/1368 (51%), Gaps = 48/1368 (3%)
Query: 6 MRLLSWNCRGLGNLEAVRALRGLIHSQAPDIVFLMETKLFSFEMQR---HRGMGGLSNIF 62
MR+LSWNC+G+GN VR LR + P+++FL ETK ++ H G L +
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60
Query: 63 PVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLK 122
P+ ++GGL L+W+ V++ ++ + I ++ D + +YG P +
Sbjct: 61 PI----GKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDK---EFYLTCIYGEPVQAER 113
Query: 123 DRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVD 182
WE + + PW+ GDFN+++ PS+K+GG + Q CGL V+
Sbjct: 114 GELWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVN 173
Query: 183 FSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSR 242
SG F+W NR V RLD + NQAW+ L+P + ++L + SDH+P++ +
Sbjct: 174 HSGYQFSWYGNR-NDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLI----NN 228
Query: 243 RTETQRHRTRMFRFEEVWLESGEECAEIISEGWSN----TNLSILSRINLVGRSLDSWGR 298
+ F++++ W++ E +++ WS TN ++ +I R + W R
Sbjct: 229 LVGDNWRKWAGFKYDKRWVQR-EGFKDLLCNFWSQQSTKTNALMMEKIASCRREISKWKR 287
Query: 299 EKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRSRANWL 358
RI+E + L +++ ++ R +K L EE W ++SR W+
Sbjct: 288 VSKPSSAVRIQELQFKLDAATKQIPFDR--RELARLKKELSQEYNNEEQFWQEKSRIMWM 345
Query: 359 KHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTG- 417
++GDRNTK+FH+ RR +N I+++ D+ GR++ D D+ RV +YF+++F++ G
Sbjct: 346 RNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFAS-EDVGY 404
Query: 418 -IEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWPIV 476
+EE+ L V+D L P T+E+V+ A F ++P K PG DG YQ+FW +
Sbjct: 405 TVEELENLTP-LVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETM 463
Query: 477 GDDISEFCLQVLQ-GDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIA 535
GD I+E + G I GM N+T I LIPK+ KA +RPISLCNVI+K+I K +A
Sbjct: 464 GDQITEMVQAFFRSGSIEEGM-NKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMA 522
Query: 536 NRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAYD 595
NR+K IL LISE Q+AFV GRLI+DN LIA E H + +A+K D+SKAYD
Sbjct: 523 NRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYD 582
Query: 596 RVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPY 655
RVEWPFL + +GF HW+ L+M CV +V + V++NG P P RGLRQGDPLSPY
Sbjct: 583 RVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPY 642
Query: 656 LFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKNI 715
LF++C E ++Q + + + G+K++R AP ISHLLFADDS+ + + + I I
Sbjct: 643 LFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRI 702
Query: 716 LATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKT 775
+ Y ASGQ++N KS + +++ E ++ LG++ YLGLP SK
Sbjct: 703 IEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKV 762
Query: 776 QIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMI 835
++K+R+ KK+ GW+ LS G+E+L+K+VA A+P+Y MSCF +P +C +IES++
Sbjct: 763 ATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVM 822
Query: 836 SRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLLG 895
+ F+W RG+HW W + +PK VGGLGF++ ++FN+AL+ K WR+ DSL+
Sbjct: 823 AEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMA 882
Query: 896 KVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWL-- 953
KVFKS YFS A G RPS+AW I + +I++G IG G + +W D W+
Sbjct: 883 KVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGA 942
Query: 954 --ANGPPVNFRQDVVDELGLTK---VADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLP 1008
A R +V + V DL+L R WN L+ F T I+++
Sbjct: 943 KPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPG 1002
Query: 1009 RQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQ-DSPSSSLSRGLDQTLWKRFWKAPSMP 1067
+ D+ W + G YSVK+GY + E++ Q ++P L LD ++++ WK P
Sbjct: 1003 GKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLD-PIFQQIWKLDVPP 1061
Query: 1068 RVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCWFASPM 1127
++ WR L V + L R + + SC C ETV+HL C R W SP+
Sbjct: 1062 KIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPL 1121
Query: 1128 -----GVRVDPSLKMVDFLTMVIRDM--DLEVVACVQRFLFAIWEARNKHIFEEKLFCIA 1180
G + + + + V + + + A + L+ +W+ RN +F+ + F
Sbjct: 1122 PAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAP 1181
Query: 1181 GVLDRAASLV---SQSTLPFTLAASQEKDNLKRWRRPAENVVKVNVDAAVGQD-RFAGFG 1236
V+ +A + + P S +D +W+ P+ VK N D A +D G G
Sbjct: 1182 QVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVG 1241
Query: 1237 LVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCLLLQQAW 1296
V R+H G +L + S E +LRWA+ + +RRV FE+D L
Sbjct: 1242 WVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFESDSQYLVSLI 1301
Query: 1297 KKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVRREGNSCADYLARNASS 1344
+ L I+D L+ F+ V F RREGN+ AD AR + S
Sbjct: 1302 QNEMDIPSLAPRIQDIRNLLRHFEEVKFQFTRREGNNVADRTARESLS 1349
>gb|AAV32224.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1936
Score = 730 bits (1884), Expect = 0.0
Identities = 413/1131 (36%), Positives = 622/1131 (54%), Gaps = 32/1131 (2%)
Query: 5 SMRLLSWNCRGLGNLEAVRALRGLIHSQAPDIVFLMETKLFSFEMQR------HRGMGGL 58
+M L+WNCRGLGN V+ LR LI +VFL ET+ +M R RG G+
Sbjct: 635 AMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGV 694
Query: 59 SNIFPVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPE 118
S+ ++GGL L W V V + + + +I V + +YG P
Sbjct: 695 SS-------EGKSGGLALYWDESVSVDVKDINKRYI-DAYVRLSPDEPQWHITFVYGEPR 746
Query: 119 LHLKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGL 178
+ + R W ++R++R + +PW+ IGDFN+ L + P ++Q A DC L
Sbjct: 747 VENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDL 806
Query: 179 QRVDFSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLH 238
Q + F G T+ N R G V RLD A+ + W +L+P + VSHL+ SDH+P++L
Sbjct: 807 QDLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLE 866
Query: 239 CGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEGWSNTNLSI-LSRINL-VGR---SL 293
+ +T R R + +E VW E E ++I E W N + L IN+ +GR +L
Sbjct: 867 FIVK--DTTRPRQKCLHYEIVW-EREPESVQVIEEAWINAGVKTDLGDINIALGRVMSAL 923
Query: 294 DSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRS 353
SW + K + K +++AR ++L++ + + + R+A +++ +L +EE++W QRS
Sbjct: 924 RSWSKTKVKNVGKELEKAR---KKLEDLIASNAARSSIRQATDHMNEMLYREEMLWLQRS 980
Query: 354 RANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTC 413
R NWLK GDRNT+FFHS+A R K+N I +++D+NG + + + T YFQ ++
Sbjct: 981 RVNWLKEGDRNTRFFHSRAVWRAKKNKISKLRDENGAIHSTTSVLETMATEYFQGVYKAD 1040
Query: 414 NPTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFW 473
E V L +VTDA L F E++ +A+FQ+ P K+P DGFPA FYQ+ W
Sbjct: 1041 PSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPRPDGFPARFYQRNW 1100
Query: 474 PIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKT 533
+ DI Q + P VN T IVLIPK + + YRPISLCNV++K++SK
Sbjct: 1101 GTLKSDIILAVRNFFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKC 1160
Query: 534 IANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKA 593
+ NR++ IL DL+S+ QSAF+ GR+ITDNAL+AFECFH ++K S A KLD+SKA
Sbjct: 1161 LVNRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKA 1220
Query: 594 YDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLS 653
YDRV+W FL L +GF WV+ +M CVTTV ++V NG +FAP RGLRQG+PLS
Sbjct: 1221 YDRVDWRFLELALNKLGFAHRWVSWIMLCVTTVRYSVKFNGTLLRSFAPTRGLRQGEPLS 1280
Query: 654 PYLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIK 713
P+LF+ + S L+++ ++ ++L +KI R AP IS+LLFADD++LF +A +EAE +K
Sbjct: 1281 PFLFLFVADGLSLLLKEKVAQNSLTPLKICRQAPGISYLLFADDTLLFFKAEKKEAEVVK 1340
Query: 714 NILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKS 773
+L Y + +GQ IN K + P + D++ L V+ + D+YLG PT G+
Sbjct: 1341 EVLTNYAQGTGQLINPAKCSILFGEASPSSVSEDIRNTLQVERDNFEDRYLGFPTPEGRM 1400
Query: 774 KTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIES 833
F+ ++ ++ K++ W E LS G+E+LIK+V QAIP YVM F PD + +E+
Sbjct: 1401 HKGRFQSLQAKIAKRVIQWGENFLSSGGKEILIKAVIQAIPVYVMGLFKFPDSVYDELTK 1460
Query: 834 MISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSL 893
M F+WG D +R HW W ++ + K GGLGFRD+K FN AL+ + WR+ +P+SL
Sbjct: 1461 MTRNFWWGADNGRRRTHWRAWDSLTKAKINGGLGFRDYKLFNQALLTRQAWRLIEFPNSL 1520
Query: 894 LGKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWL 953
+V K+ YF G + S W I +++KG WRIG G+ VRIW D W+
Sbjct: 1521 CAQVLKAKYFPHGSLTDTTFSANASPTWHGIEYGLDLLKKGIIWRIGNGNSVRIWRDPWI 1580
Query: 954 ANGPPVNFRQDVVDELG--LTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQP 1011
P R+ V + L V+DL ++ + W+ I F A I + + +
Sbjct: 1581 ---PRDLSRRPVSSKANCRLKWVSDL-IAEDGTWDSAKINQYFLKIDADIIQKICISARL 1636
Query: 1012 ESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVRE 1071
E D + W G +SV++ Y+ ++ ++ SSS S L+++ W+ WK +VR
Sbjct: 1637 EEDFIAWHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNKS-WELIWKCNVPQKVRI 1695
Query: 1072 VSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCW 1122
+WRV + +L ++R ++ C +C E E H C W
Sbjct: 1696 FAWRVASNSLATMENKKKRNLERFDVCGICDREKEDAGHALCRCVHANSLW 1746
Score = 49.3 bits (116), Expect = 9e-04
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 1209 KRWRRPAENVVKVNVDAAVG-QDRFAGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALS 1267
+RW RP +K+NVD + G G++ R+ G V+ ++ + P AE +
Sbjct: 1775 RRWERPRNGWMKLNVDGSFDINSEKGGIGMILRNCLGNVIFSSCRSLDSCSGPLEAELHA 1834
Query: 1268 LRWAMDLAIQLGFRRVQFETDC-LLLQQAWKKVSGNSYLFSIIKDCHKLVVFFDHVDLTF 1326
+ LA+ +Q ETDC ++Q S L +I ++ L+ + ++
Sbjct: 1835 CVEGLHLALHWTLLPIQVETDCSSVIQLLNHPDKDRSVLANIAQEAKSLMAGDRQIAISK 1894
Query: 1327 VRREGNSCADYLARNASSYP-DSVWIEEGPPGLSSLLRDD 1365
V+R N + +LA A + S W+ E +S + +D
Sbjct: 1895 VQRSQNVISHFLANKARAESLSSFWLGENCTFISHFVGED 1934
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 720 bits (1858), Expect = 0.0
Identities = 446/1337 (33%), Positives = 684/1337 (50%), Gaps = 60/1337 (4%)
Query: 8 LLSWNCRGLGNLEAVRALRGLIHSQAPDIVFLMETKL---FSFEMQRHRGMGGLSNIFPV 64
++SWNC+GL N +R L+ + PDI+FLMETK F +++ G + + P
Sbjct: 2 VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEP- 60
Query: 65 QCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLKDR 124
R+GGL + W+S +E+ + A + + V + V + +YG P H++ +
Sbjct: 61 ---EGRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWF---ISCVYGLPVTHMRPK 114
Query: 125 TWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFS 184
WE + S+ W IGDFNDI S +KLGG + Q +C + + +
Sbjct: 115 LWEHLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGST 174
Query: 185 GPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRT 244
G SFTW NR V +LD N AW +++P + L + SDH PV++ + T
Sbjct: 175 GNSFTWGGNR-NDQWVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLV----KFT 229
Query: 245 ETQRHRTRMFRFEEVWLESGEECAEIISEGWSN-----TNLSILSRINLVGRSLDSWGRE 299
FR+++ L+ C E+I W++ T+ S S I R++ W
Sbjct: 230 NDNELFRGQFRYDKR-LDDDPYCIEVIHRSWNSAMSQGTHSSFFSLIEC-RRAISVWKHS 287
Query: 300 KYGELPKRIKEARAFLQRLQEEVQTEQVVRAT-----REAEKNLDVLLKQEEIVWSQRSR 354
RIK RL++++ E+ ++ + L + EE+ W Q+SR
Sbjct: 288 SDTNAQSRIK-------RLRKDLDAEKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSR 340
Query: 355 ANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCN 414
WL GD+NT FFH+ R +N + + D+N ++F R++D ++ +S+F+ +F++
Sbjct: 341 QKWLAGGDKNTGFFHATVHSERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTY 400
Query: 415 PTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWP 474
+ +VT L T +V A+F ++ APG DGF ALF+Q+ W
Sbjct: 401 ILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVFSINKESAPGPDGFTALFFQQHWD 460
Query: 475 IVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTI 534
+V I + + P N T I LIPK+ + RPISLC+V++KIISK +
Sbjct: 461 LVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKIISKIL 520
Query: 535 ANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAY 594
R+K L ++S QSAFVP RLI+DN L+A E H ++ MA K DMSKAY
Sbjct: 521 TQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAY 580
Query: 595 DRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSP 654
DRVEWPFL +++T +GF W++ +MNCVT+V+++V++NG P P RG+RQGDPLSP
Sbjct: 581 DRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSP 640
Query: 655 YLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKN 714
LF+LC EA ++ K+ + GI+ ++HLLFADD++L +AT QE E +
Sbjct: 641 ALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQ 700
Query: 715 ILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSK 774
L+ Y + SGQ INL KS ++ +NV ++ G+ KYLGLP + SK
Sbjct: 701 CLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWIKSRSGISLEGGTGKYLGLPECLSGSK 760
Query: 775 TQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESM 834
+F F+KE++ +L GW +TLS+ G+EVL+KS+A A+P YVMSCF LP LC ++ ++
Sbjct: 761 RDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTV 820
Query: 835 ISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLL 894
+ F+W KR IHW+ W+ + PK GG GF+D + FN AL+AK WR+ SL
Sbjct: 821 MMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLF 880
Query: 895 GKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWLA 954
+VF+S YFS+ A +G RPSYAW IL ++ +G IG G + +W D WL
Sbjct: 881 SRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLH 940
Query: 955 NGP---PVNFRQDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQP 1011
+G P+N R+ + +L KV+ L+ +R WN+ ++ F P I+ P
Sbjct: 941 DGSNRRPLNRRRFINVDL---KVSQLIDPTSRNWNLNMLRDLF-PWKDVEIILKQRPLFF 996
Query: 1012 ESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVRE 1071
+ D WL + +GLYSVKTGYEFL + V + + +L+ + W + P++R
Sbjct: 997 KEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRI 1056
Query: 1072 VSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCW---FASPMG 1128
W+ GA+PV +LR RG+ D C +C E+ET++H+ C + R W S G
Sbjct: 1057 FLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAG 1116
Query: 1129 VRVDPSL-----KMVDFLTMVIRDMDLEVVACVQRFLFAIWEARNKHIFEEKLFCIAGVL 1183
S+ +++D D+ + L+ +W+ RN +FE K ++
Sbjct: 1117 SEFSNSVYTNMSRLIDLTQQ--NDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLV 1174
Query: 1184 DRAASLVSQSTLPFTLAASQEKD-NLKRWRRPAENVVKVNVDAAVG-QDRFAGFGLVARD 1241
D+A + T + EK + +W P +K N+ A Q F+G V RD
Sbjct: 1175 DKAYEAYHEWFSAQTHMQNDEKHLKITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRD 1234
Query: 1242 HAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCLLLQQA------ 1295
G+VL + + V SP A+ S WA++ F RV F + + QA
Sbjct: 1235 SQGKVLLHSRRSFNEVHSPYSAKIRSWEWALESMTHHHFDRVIFASSTHEIIQALHKPHE 1294
Query: 1296 WKKVSGN-SYLFSIIKD 1311
W + G+ S L S KD
Sbjct: 1295 WPLLLGDISELLSFTKD 1311
>gb|AAQ19327.1| bZIP-like protein [Oryza sativa (japonica cultivar-group)]
Length = 2367
Score = 711 bits (1834), Expect = 0.0
Identities = 427/1304 (32%), Positives = 671/1304 (50%), Gaps = 49/1304 (3%)
Query: 48 EMQRHRGMGGLSNIFPVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVP 107
+M R RG GL V +GGL L W V V + + + +I V
Sbjct: 772 KMSRLRGRLGLRGFTGVS-SEGMSGGLALYWDESVSVDVKDINKRYI-DAYVQLSPEEPQ 829
Query: 108 MQVYALYGFPELHLKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQ 167
V +YG P + + R W ++R++ + +PW IGDFN+ + + P ++Q
Sbjct: 830 WHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAVIGDFNETMWQFEHFSRTPRGEPQMQ 889
Query: 168 VATQACADCGLQRVDFSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIR 227
DC L + F G T+ N R G V RLD + + W +++ + V HL+
Sbjct: 890 DFRDVLQDCELHDLGFKGVPHTYDNKREGWRNVKVRLDRVVADDKWRDIYSTAQVVHLVS 949
Query: 228 HQSDHNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEGW----SNTNLSIL 283
SDH P++L+ + + + R + +E VW E E ++I E W +L +
Sbjct: 950 PCSDHCPILLNLVVK--DPHQLRQKCLHYEIVW-EREPEATQVIEEAWVVAGEKADLGDI 1006
Query: 284 SR-INLVGRSLDSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLL 342
++ + V +L SW R K + + +++AR L L E V+R A +++ LL
Sbjct: 1007 NKALAKVMTALRSWSRAKVKNVGRELEKARKKLAELIESNADRTVIR---NATDHMNELL 1063
Query: 343 KQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVL 402
+EE++W QRSR NWLK DRNTKFFHS+A R K+N I +++D N + +
Sbjct: 1064 YREEMLWLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHSSTMKLESMA 1123
Query: 403 TSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLD 462
T YFQ++++ E V L+ +VTD L FT +++ +A+FQ+ P K+PG D
Sbjct: 1124 TEYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQIGPLKSPGPD 1183
Query: 463 GFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISL 522
GFPA FYQ+ W + DI + Q + P VN T IVLIPK ++ V +RPISL
Sbjct: 1184 GFPARFYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISL 1243
Query: 523 CNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSG 582
CNV++K++SK + NR++ IL DL+S QSAFV GR+ITDNAL+AFECFH M+K
Sbjct: 1244 CNVVYKVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNALLAFECFHAMQKNKKANHA 1303
Query: 583 MMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAP 642
A KLD+SKAYDRV+W FL + +GF WVN +M CVT+V + V NG +FAP
Sbjct: 1304 ACAYKLDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCVTSVRYMVKFNGTLLQSFAP 1363
Query: 643 HRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFA 702
RGLRQGDPL P+LF+ + S L+++ ++ ++L K+ R+AP ISHLLFADD++LF
Sbjct: 1364 TRGLRQGDPLLPFLFLFVADGLSLLLKEKVAQNSLTPFKVCRAAPGISHLLFADDTLLFF 1423
Query: 703 RATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDK 762
+A +EAE +K +L++Y +GQ IN K + + + +L V+ D+
Sbjct: 1424 KAHQREAEVVKEVLSSYAMGTGQLINPAKCSILMGGASTPAVSEAISEILQVERDRFEDR 1483
Query: 763 YLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFV 822
YLG PT G+ F+ ++ ++WK++ W E LS G+EVLIK+V QAIP YVM F
Sbjct: 1484 YLGFPTPEGRMHKGRFQSLQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFK 1543
Query: 823 LPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKN 882
LP+ + +++ + F+W +R HW W ++ +PK +GGLGFRD++ FN AL+A+
Sbjct: 1544 LPESVIDDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQ 1603
Query: 883 WWRIYNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEG 942
WR+ YPDSL +V K+ YF G + G S AW I +++KG WR+G G
Sbjct: 1604 AWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1663
Query: 943 SRVRIWEDNWLANGPPVNFRQDVVDELG--LTKVADLMLSGNRGWNVPLIEWTFCPATAS 1000
+ +RIW D+WL P + R+ + + L V+DL ++ + W+VP I F A
Sbjct: 1664 NSIRIWRDSWL---PRDHSRRPITGKANCRLKWVSDL-ITEDGSWDVPKIHQYFHNLDAE 1719
Query: 1001 RIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRF 1060
I+++ + + E D + W +G++SV++ Y ++V + SSS + +++ W+
Sbjct: 1720 VILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKA-WEMI 1778
Query: 1061 WKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRG 1120
WK +V+ +WRV + L ++R ++ C +C E+E H C
Sbjct: 1779 WKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQASQ 1838
Query: 1121 CWFASPMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRFLFAIWEARNKHIFEEKLFCIA 1180
W V +K + D LE + ++ +F + RN ++ E + +
Sbjct: 1839 LWSCMHKSGSVSVDIKASVLGRFWLFDC-LEKIPEYEQAMFLMTLWRNWYVRNELIHGKS 1897
Query: 1181 GVLDRAASLVSQS--TLPFTLAASQEKDNLKR------------------------WRRP 1214
+ QS L F + + + D +K W RP
Sbjct: 1898 APPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQPCWERP 1957
Query: 1215 AENVVKVNVDAAV-GQDRFAGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMD 1273
+ +K+NVD + G G++ R+ AG+++ + K +P +E + +
Sbjct: 1958 KDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACVEGLK 2017
Query: 1274 LAIQLGFRRVQFETDCLLLQQAWKKVSGN-SYLFSIIKDCHKLV 1316
LAI +Q ETDC + Q + + + S L +II + L+
Sbjct: 2018 LAIHWTLLPIQVETDCASVVQLLQGIGRDFSVLANIIHEARHLL 2061
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25410938|pir||G84429 hypothetical protein
At2g01840 [imported] - Arabidopsis thaliana
Length = 1715
Score = 703 bits (1815), Expect = 0.0
Identities = 428/1368 (31%), Positives = 686/1368 (49%), Gaps = 69/1368 (5%)
Query: 6 MRLLSWNCRGLGNLEAVRALRGLIHSQAPDIVFLMETKL---FSFEMQRHRGMGGLSNIF 62
MR+ WNC+GLG VR L + D++FL+ETK ++ ++ G + I
Sbjct: 363 MRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMCIIS 422
Query: 63 PVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLK 122
P R +GGL + W+ + + +I+ H + ++ + + +YG P +
Sbjct: 423 P----RGLSGGLVVYWKKHLSIQVIS---HDVRLVDLYVEYKNFNFYLSCIYGHPIPSER 475
Query: 123 DRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVD 182
WE ++ V PW+ GDFN+IL+ ++K GG + LQ T C ++ +
Sbjct: 476 HHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLK 535
Query: 183 FSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSR 242
G ++W R ++ LD IN W +P L SDH PV++
Sbjct: 536 SKGNPYSWVGKRQNE-TIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDIAEE 594
Query: 243 RTETQ---RHRTRMFRFEEVWLESGEECAEIISEGW----SNTNLSILSRINLVGRSLDS 295
+ R+ R F+FE+ + + GW S+++ +++ + L
Sbjct: 595 VCTKRGQFRYDRRHFQFEDF--------VDSVQRGWNRGRSDSHGGYYEKLHCCRQELAK 646
Query: 296 WGREKYGELPKRIKEARAFLQRLQEE-VQTEQVVRATREAEKNLDVLLKQEEIVWSQRSR 354
W R ++I+ + + + + Q + R+ +L+ + EE+ W +SR
Sbjct: 647 WKRRTKTNTAEKIETLKYRVDAAERDHTLPHQTILRLRQ---DLNQAYRDEELYWHLKSR 703
Query: 355 ANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCN 414
W+ GDRNT FF++ R+ RN I+ I D G + RD I +V +YF ++F+T
Sbjct: 704 NRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQ 763
Query: 415 PTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWP 474
+ EE+ + + +VT+ L T ++V +A+F + +APG DGF A FY W
Sbjct: 764 TSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWD 823
Query: 475 IVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTI 534
++G+D+ + D+ +NQT I LIPK+ + YRPISLC +KIISK +
Sbjct: 824 LIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKIL 883
Query: 535 ANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAY 594
R+K L D+IS++Q+AFVPG+ I+DN L+A E H +K R +SG +A+K D+SKAY
Sbjct: 884 IKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAY 943
Query: 595 DRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSP 654
DRVEW FL V+ +GF WV +M CVT+V++ V++NG+P P RG+RQGDPLSP
Sbjct: 944 DRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSP 1003
Query: 655 YLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKN 714
YLF+ C E S +++K+ +HG+KI++ ISHLLFADDS+ F RA+ Q E +
Sbjct: 1004 YLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNIEQLAL 1063
Query: 715 ILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSK 774
I YE ASGQKIN KS + + +P L LLG+ V KYLGLP +G+ K
Sbjct: 1064 IFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRK 1123
Query: 775 TQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESM 834
++F ++ +V ++ +GW LS AG+E++IK++A A+P Y M+CF+LP +CNEI S+
Sbjct: 1124 VELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEINSL 1183
Query: 835 ISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLL 894
I+ F+WG ++ G LGF+D FN AL+AK WRI P SLL
Sbjct: 1184 ITAFWWG------------------KENEGDLGFKDLHQFNRALLAKQAWRILTNPQSLL 1225
Query: 895 GKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWLA 954
+++K +Y+ + A KG SY W+ I + ++Q+G R+G+G +IWED WL
Sbjct: 1226 ARLYKGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDGQTTKIWEDPWLP 1285
Query: 955 NGPPVNFRQDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPESD 1014
PP R ++DE KVADL R W+ + E P S+ L D
Sbjct: 1286 TLPPRPARGPILDE--DMKVADLWRENKREWDPVIFEGVLNPEDQQLAKSLYLSNYAARD 1343
Query: 1015 QLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVREVSW 1074
W T + Y+V++GY V + + G D L + W+ P+++ W
Sbjct: 1344 SYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINPLEG-DVPLKQEIWRLKITPKIKHFIW 1402
Query: 1075 RVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCWFASPMG-----V 1129
R +GAL T+LR R + D +C C DET++H+ C+ + W ++
Sbjct: 1403 RCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSGSNRLC 1462
Query: 1130 RVDPSLKMVDFLTMVIRDMDLEVVACVQRF--LFAIWEARNKHIFEEK---LFCIAGVLD 1184
D + + + ++ +L ++ + F ++ +W++RN+++F++ + +A +
Sbjct: 1463 FTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQQLDRFPWKVAQKAE 1522
Query: 1185 RAA-----SLVSQSTLPFTLAASQEK--DNLKRWRRPAENVVKVNVDAAVGQDR-FAGFG 1236
+ A ++V+ + + A S ++ K+W P E +K N D+ Q R + G
Sbjct: 1523 QEATEWVETMVNDTAISHNTAQSNDRPLSRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTG 1582
Query: 1237 LVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCLLLQQAW 1296
+ RD G VL + S AEAL A+ + G+ V FE D L L
Sbjct: 1583 WILRDCNGRVLHSGCAKLQQSYSALQAEALGFLHALQMVWIRGYCYVWFEGDNLELTNLI 1642
Query: 1297 KKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVRREGNSCADYLARNASS 1344
K + L +++ D + + +V RE N AD L + A+S
Sbjct: 1643 NKTEDHHLLETLLYDIRFWMTKLPFSSIGYVNRERNLAADKLTKYANS 1690
>gb|AAD03565.2| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411819|pir||H84557 hypothetical protein
At2g17910 [imported] - Arabidopsis thaliana
Length = 1344
Score = 701 bits (1810), Expect = 0.0
Identities = 437/1311 (33%), Positives = 669/1311 (50%), Gaps = 60/1311 (4%)
Query: 34 PDIVFLMETKL---FSFEMQRHRGMGGLSNIFPVQCGRNRAGGLCLLWRSEVEVTIINAS 90
PDI+FLMETK F +++ G + + P R+GGL + W+S +E+ + A
Sbjct: 7 PDILFLMETKNSQDFVYKVFCWLGYDFIHTVEP----EGRSGGLAIFWKSHLEIEFLYAD 62
Query: 91 LHHILFTVVHSDSVTVPMQVYALYGFPELHLKDRTWEMIRSVRPMAPIPWLCIGDFNDIL 150
+ + V + V + +YG P H++ + WE + S+ W IGDFNDI
Sbjct: 63 KNLMDLQVSSRNKVWF---ISCVYGLPVTHMRPKLWEHLNSIGLKRAEAWCLIGDFNDIR 119
Query: 151 SPSDKLGGAPPDLARLQVATQACADCGLQRVDFSGPSFTWTNNRVGPGRVDERLDYALIN 210
S +KLGG + Q +C + + +G SFTW NR V +LD N
Sbjct: 120 SNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNR-NDQWVQCKLDRCFGN 178
Query: 211 QAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEECAEI 270
AW +++P + L + SDH PV++ + T FR+++ L+ C E+
Sbjct: 179 PAWFSIFPNAHQWFLEKFGSDHRPVLV----KFTNDNELFRGQFRYDKR-LDDDPYCIEV 233
Query: 271 ISEGWSN-----TNLSILSRINLVGRSLDSWGREKYGELPKRIKEARAFLQRLQEEVQTE 325
I W++ T+ S S I R++ W RIK RL++++ E
Sbjct: 234 IHRSWNSAMSQGTHSSFFSLIEC-RRAISVWKHSSDTNAQSRIK-------RLRKDLDAE 285
Query: 326 QVVRAT-----REAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNL 380
+ ++ + L + EE+ W Q+SR WL GD+NT FFH+ R +N
Sbjct: 286 KSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNE 345
Query: 381 IEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTP 440
+ + D+N ++F R++D ++ +S+F+ +F++ + +VT L
Sbjct: 346 LSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQE 405
Query: 441 FTREDVEEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQT 500
T +V A+F ++ APG DGF ALF+Q+ W +V I + + P N T
Sbjct: 406 VTELEVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHT 465
Query: 501 LIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLIT 560
I LIPK+ + RPISLC+V++KIISK + R+K L ++S QSAFVP RLI+
Sbjct: 466 HICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLIS 525
Query: 561 DNALIAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVM 620
DN L+A E H ++ MA K DMSKAYDRVEWPFL +++T +GF W++ +M
Sbjct: 526 DNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIM 585
Query: 621 NCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGI 680
NCVT+V+++V++NG P P RG+RQGDPLSP LF+LC EA ++ K+ + GI
Sbjct: 586 NCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGI 645
Query: 681 KISRSAPVISHLLFADDSVLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNV 740
+ ++HLLFADD++L +AT QE E + L+ Y + SGQ INL KS ++ +NV
Sbjct: 646 QFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNV 705
Query: 741 PENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRA 800
++ G+ KYLGLP + SK +F F+KE++ +L GW +TLS+
Sbjct: 706 DIQIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQG 765
Query: 801 GREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQP 860
G+EVL+KS+A A+P YVMSCF LP LC ++ +++ F+W KR IHW+ W+ + P
Sbjct: 766 GKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLP 825
Query: 861 KHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYA 920
K GG GF+D + FN AL+AK WR+ SL +VF+S YFS+ A +G RPSYA
Sbjct: 826 KDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYA 885
Query: 921 WSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWLANGP---PVNFRQDVVDELGLTKVADL 977
W IL ++ +G IG G + +W D WL +G P+N R+ + +L KV+ L
Sbjct: 886 WRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDL---KVSQL 942
Query: 978 MLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQE 1037
+ +R WN+ ++ F P I+ P + D WL + +GLYSVKTGYEFL +
Sbjct: 943 IDPTSRNWNLNMLRDLF-PWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSK 1001
Query: 1038 VVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSS 1097
V + + +L+ + W + P++R W+ GA+PV +LR RG+ D
Sbjct: 1002 QVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDG 1061
Query: 1098 CPLCGLEDETVDHLFLGCNITRGCW---FASPMGVRVDPSL-----KMVDFLTMVIRDMD 1149
C +C E+ET++H+ C + R W S G S+ +++D D+
Sbjct: 1062 CLMCDTENETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMSRLIDLTQQ--NDLP 1119
Query: 1150 LEVVACVQRFLFAIWEARNKHIFEEKLFCIAGVLDRAASLVSQSTLPFTLAASQEKD-NL 1208
+ L+ +W+ RN +FE K ++D+A + T + EK +
Sbjct: 1120 HHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQNDEKHLKI 1179
Query: 1209 KRWRRPAENVVKVNVDAAVG-QDRFAGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALS 1267
+W P +K N+ A Q F+G V RD G+VL + + V SP A+ S
Sbjct: 1180 TKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSFNEVHSPYSAKIRS 1239
Query: 1268 LRWAMDLAIQLGFRRVQFETDCLLLQQA------WKKVSGN-SYLFSIIKD 1311
WA++ F RV F + + QA W + G+ S L S KD
Sbjct: 1240 WEWALESMTHHHFDRVIFASSTHEIIQALHKPHEWPLLLGDISELLSFTKD 1290
>gb|AAG51783.1| reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
gi|25405244|pir||E96519 probable reverse transcriptase,
16838-20266 [imported] - Arabidopsis thaliana
Length = 1142
Score = 679 bits (1752), Expect = 0.0
Identities = 406/1151 (35%), Positives = 604/1151 (52%), Gaps = 55/1151 (4%)
Query: 230 SDHNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEGWSNTNL----SILSR 285
SDH+PV+ + +++ FRF++ W+ + E IS+GW+ + + +
Sbjct: 4 SDHSPVIATIADKIPRGKQN----FRFDKRWIGK-DGLLEAISQGWNLDSGFREGQFVEK 58
Query: 286 INLVGRSLDSW-------GREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNL 338
+ R++ W GR+ +L + A+ R +EE+ TE +R L
Sbjct: 59 LTNCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRDDDRSREEI-TELTLR--------L 109
Query: 339 DVLLKQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADI 398
+ EE W Q+SR+ W+K GD N+KFFH+ QRR RN I + D+NG + D DI
Sbjct: 110 KEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDI 169
Query: 399 ARVLTSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKA 458
+ SYFQ +F+T NP +E V +TD +L+ T +V ALF +HP KA
Sbjct: 170 QNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKA 229
Query: 459 PGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYR 518
PG DG ALF+QK W I+ D+ LQ + +N T I LIPK ++ + R
Sbjct: 230 PGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELR 289
Query: 519 PISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRIS 578
PISLCNV +K+ISK + R+K +L +LISE QSAFV GRLI+DN LIA E FH ++ S
Sbjct: 290 PISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSS 349
Query: 579 GRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQP 638
+ MA+K DMSKAYD+VEW F+ ++L MGF W++ +M C+TTV + V++NG P+
Sbjct: 350 CKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKG 409
Query: 639 TFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDS 698
P RGLRQGDPLSPYLFILC E A I+K+ + + GIK++ +P +SHLLFADDS
Sbjct: 410 LIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDS 469
Query: 699 VLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVD 758
+ F +A ++ I IL YE SGQ+IN KS + V ++ D++L+LG+ +
Sbjct: 470 LFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLG 529
Query: 759 SYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVM 818
YLGLP +G SKT++F FV++R+ ++ GW + LS+ G+EV+IKSVA +P YVM
Sbjct: 530 GMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVM 589
Query: 819 SCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLAL 878
SCF LP + +++ S +++F+W + RG+HW+ W +C K GGLGFR+ FN AL
Sbjct: 590 SCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSAL 649
Query: 879 VAKNWWRIYNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWR 938
+AK WR+ PDSL KVFK YF + K Y PSY W ++ +++ KG R
Sbjct: 650 LAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKR 709
Query: 939 IGEGSRVRIWEDNWL-ANGP-PVNFRQDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCP 996
+G G+ + +W D W+ A P P + +VD KV L+ S + WN+ L++ F P
Sbjct: 710 VGSGASISVWNDPWIPAQFPRPAKYGGSIVDPS--LKVKSLIDSRSNFWNIDLLKELFDP 767
Query: 997 ATASRIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTL 1056
I ++P+ D L W T G Y+VK+GY D + G D T
Sbjct: 768 EDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYH----TARLDLNEGTTLIGPDLTT 823
Query: 1057 WKRF-WKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGC 1115
K + WK P++R W++ +G +PV LR+RG+ D C CG +E+++H C
Sbjct: 824 LKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQC 883
Query: 1116 NITRGCWFAS--PMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRFL-FAIWEARNKHIF 1172
+ R W S P + PS + L + + V + ++ + IW+ARN+ +F
Sbjct: 884 HPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVF 943
Query: 1173 EE-----KLFCIAGVLDRAASLVSQSTLPFTLAASQEKDNLKRWRRPAENVV----KVNV 1223
E + V + + +Q L S D+ R R +++ + +
Sbjct: 944 ENVDKDPMEILLLAVKEAQSWQEAQVELHSERHGSLSIDSRIRVRDVSQDTTFSGFRCFI 1003
Query: 1224 DAA-VGQDRFAGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRR 1282
D + D+F+G G GE A LSP E +L WAM I +
Sbjct: 1004 DGSWKASDQFSGTGWFCLSSLGESPTMGAANVRRSLSPLHTEMEALLWAMKCMIGADNQN 1063
Query: 1283 VQFETDC----LLLQQAWKKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVRREGNSCADYL 1338
V F TDC ++ + + + YL + D + F + L+ + R N AD L
Sbjct: 1064 VAFFTDCSDLVKMVSSPTEWPAFSVYLEELQSDREE----FTNFSLSLISRSANVKADKL 1119
Query: 1339 ARNASSYPDSV 1349
AR + P V
Sbjct: 1120 ARKIRTVPHHV 1130
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25412331|pir||G84649 hypothetical protein
At2g25550 [imported] - Arabidopsis thaliana
Length = 1750
Score = 669 bits (1725), Expect = 0.0
Identities = 424/1337 (31%), Positives = 668/1337 (49%), Gaps = 46/1337 (3%)
Query: 35 DIVFLMETKLFSFEMQRHRGMGGLSNIFPVQCGRNRAGGLCLLWRSEVEVTIINASLHHI 94
DI+FL+ET ++ + G N+ Q R+GGL L+W++ V +++I+ I
Sbjct: 411 DILFLVETLNQCDKVCKLAYDLGFPNVI-TQPPNGRSGGLALMWKNNVSLSLISQDERLI 469
Query: 95 LFTVVHSDSVTVPMQVYALYGFPELHLKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSD 154
V ++ + +YG P + + W+ + + WL +GDFN+ILS ++
Sbjct: 470 DSHVTFNNK---SFYLSCVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAE 526
Query: 155 KLGGAPPDLARLQVATQACADCGLQRVDFSGPSFTWTNNRVGPGRVDERLDYALINQAWV 214
K+GG + + + C ++ + G F+W R V LD IN AW
Sbjct: 527 KIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVGER-HTHTVKCCLDRVFINSAWT 585
Query: 215 NLWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEG 274
+P + + L SDH PV++H E+ R+++FRF+ ++ I+
Sbjct: 586 ATFPYAEIEFLDFTGSDHKPVLVHFN----ESFPRRSKLFRFDNRLIDI-PTFKRIVQTS 640
Query: 275 WSNTNLS----ILSRINLVGRSLDSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVVRA 330
W S I RI+ +++ +RIK+ ++ L R E T +V R
Sbjct: 641 WRTNRNSRSTPITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMES--TRRVDRQ 698
Query: 331 T-REAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNG 389
+ +++L EEI W Q+SR W+K GD+NT +FH+ R +N + I DD G
Sbjct: 699 LIPQLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQG 758
Query: 390 RKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLVD-----GRVTDAHRRILSTPFTRE 444
R F D +I +F IFST GI+ + +D VT+ L+ F+
Sbjct: 759 RMFTGDKEIGNHAQDFFTNIFST---NGIK--VSPIDFADFKSTVTNTVNLDLTKEFSDT 813
Query: 445 DVEEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVL 504
++ +A+ Q+ KAPG DG A FY+ W IVG D+ + + +N T I +
Sbjct: 814 EIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICM 873
Query: 505 IPKVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNAL 564
IPK+ + YRPI+LCNV++K+ISK + NR+K L+ ++S++Q+AF+PGR+I DN +
Sbjct: 874 IPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVM 933
Query: 565 IAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVT 624
IA E H +K R MA+K D+SKAYDRVEW FL + + GF W+ +M V
Sbjct: 934 IAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVK 993
Query: 625 TVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISR 684
+V+++V++NG+P P RG+RQGDPLSPYLFILCG+ S LI S+ L G++I
Sbjct: 994 SVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGN 1053
Query: 685 SAPVISHLLFADDSVLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPENC 744
AP I+HL FADDS+ F +A V+ + +K++ YE SGQKIN++KSM++ V +
Sbjct: 1054 GAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGST 1113
Query: 745 FVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREV 804
L+ +L + KYLGLP G+ K ++F ++ +RV K+ W + LS AG+E+
Sbjct: 1114 QSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEI 1173
Query: 805 LIKSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVG 864
++KSVA A+P Y MSCF LP G+ +EIES++ F+W +++RGI WV WK + K G
Sbjct: 1174 MLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEG 1233
Query: 865 GLGFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRI 924
GLGFRD FN AL+AK WR+ YP+SL +V K+ YF + AK + SY W+ +
Sbjct: 1234 GLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASL 1293
Query: 925 LKTSAMIQKGSCWRIGEGSRVRIWEDNWLANGPPVNFR-QDVVDELGLTKVADLMLSGNR 983
L A+++KG+ IG+G +RI DN + + PP ++ E+ + + +
Sbjct: 1294 LDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFE-RKGSYY 1352
Query: 984 GWNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDS 1043
W+ I + I + L + + D++ W G Y+V++GY L + +
Sbjct: 1353 FWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNI 1412
Query: 1044 PSSSLSRGLDQTLWKRFWKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGL 1103
P+ + G L R W P MP+++ WR + AL +L RG+ +D SCP C
Sbjct: 1413 PAINPPHG-SIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHR 1471
Query: 1104 EDETVDHLFLGCNITRGCWFASPMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRF---- 1159
E+E+++H C W S + + L DF + ++ + F
Sbjct: 1472 ENESINHALFTCPFATMAWRLSDSSL-IRNQLMSNDFEENISNILNFVQDTTMSDFHKLL 1530
Query: 1160 ----LFAIWEARNKHIFEE------KLFCIAGVLDRAASLVSQSTLPFTLAASQEKDNLK 1209
++ IW+ARN +F + K A +QS Q +N
Sbjct: 1531 PVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKI 1590
Query: 1210 RWRRPAENVVKVNVDAAVGQDRF-AGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSL 1268
WR P VK N DA + A G + R+H G ++ + +P AE +L
Sbjct: 1591 EWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKAL 1650
Query: 1269 RWAMDLAIQLGFRRVQFETDCLLLQQAWKKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVR 1328
A+ G+ +V E DC L +S +S L + ++D F + F+R
Sbjct: 1651 LAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIR 1710
Query: 1329 REGNSCADYLARNASSY 1345
++GN A LA+ +Y
Sbjct: 1711 KKGNKLAHVLAKYGCTY 1727
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25408166|pir||G84721 hypothetical protein
At2g31520 [imported] - Arabidopsis thaliana
Length = 1524
Score = 665 bits (1717), Expect = 0.0
Identities = 418/1315 (31%), Positives = 656/1315 (49%), Gaps = 46/1315 (3%)
Query: 57 GLSNIFPVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGF 116
G N+ Q R+GGL L+W++ V +++I+ I V ++ + +YG
Sbjct: 207 GFPNVI-TQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHVTFNNK---SFYLSCVYGH 262
Query: 117 PELHLKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADC 176
P + + W+ + + WL +GDFN+ILS ++K+GG + + + C
Sbjct: 263 PTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHC 322
Query: 177 GLQRVDFSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVV 236
++ + G F+W R V LD IN AW +P + L SDH PV+
Sbjct: 323 DIEDMRSKGDRFSWVGER-HTHTVKCCLDRVFINSAWTATFPYAETEFLDFTGSDHKPVL 381
Query: 237 LHCGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEGWSNTNLS----ILSRINLVGRS 292
+H E+ R+++FRF+ ++ I+ W S I RI+ ++
Sbjct: 382 VHFN----ESFPRRSKLFRFDNRLIDI-PTFKRIVQTSWRTNRNSRSTPITERISSCRQA 436
Query: 293 LDSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVVRAT-REAEKNLDVLLKQEEIVWSQ 351
+ +RIK+ ++ L R E T +V R + +++L EEI W Q
Sbjct: 437 MARLKHASNLNSEQRIKKLQSSLNRAMES--TRRVDRQLIPQLQESLAKAFSDEEIYWKQ 494
Query: 352 RSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFS 411
+SR W+K GD+NT +FH+ R +N + I DD GR F D +I +F IFS
Sbjct: 495 KSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFS 554
Query: 412 TCNPTGIEEVATLVD-----GRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPA 466
T GI+ + +D VT+ L+ F+ ++ +A+ Q+ KAPG DG A
Sbjct: 555 T---NGIK--VSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTA 609
Query: 467 LFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVI 526
FY+ W IVG D+ + + +N T I +IPK+ + YRPI+LCNV+
Sbjct: 610 RFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVL 669
Query: 527 FKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMAL 586
+K+ISK + NR+K L+ ++S++Q+AF+PGR+I DN +IA E H +K R MA+
Sbjct: 670 YKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAV 729
Query: 587 KLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGL 646
K D+SKAYDRVEW FL + + GF W+ +M V +V+++V++NG+P P RG+
Sbjct: 730 KTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGI 789
Query: 647 RQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATV 706
RQGDPLSPYLFILCG+ S LI S+ L G++I AP I+HL FADDS+ F +A V
Sbjct: 790 RQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANV 849
Query: 707 QEAECIKNILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGL 766
+ + +K++ YE SGQKIN++KSM++ V + L+ +L + KYLGL
Sbjct: 850 RNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGL 909
Query: 767 PTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDG 826
P G+ K ++F ++ +RV K+ W + LS AG+E+++KSVA A+P Y MSCF LP G
Sbjct: 910 PEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKG 969
Query: 827 LCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRI 886
+ +EIES++ F+W +++RGI WV WK + K GGLGFRD FN AL+AK WR+
Sbjct: 970 IVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRL 1029
Query: 887 YNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVR 946
YP+SL +V K+ YF + AK + SY W+ +L A+++KG+ IG+G +R
Sbjct: 1030 IQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIR 1089
Query: 947 IWEDNWLANGPPVNFR-QDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSV 1005
I DN + + PP ++ E+ + + + W+ I + I +
Sbjct: 1090 IGLDNIVDSHPPRPLNTEETYKEMTINNLFE-RKGSYYFWDDSKISQFVDQSDHGFIHRI 1148
Query: 1006 PLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPS 1065
L + + D++ W G Y+V++GY L + + P+ + G L R W P
Sbjct: 1149 YLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHG-SIDLKTRIWNLPI 1207
Query: 1066 MPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCWFAS 1125
MP+++ WR + AL +L RG+ +D CP C E+E+++H C W+ S
Sbjct: 1208 MPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAWWLS 1267
Query: 1126 PMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRF--------LFAIWEARNKHIFEE--- 1174
+ + L DF + ++ + F ++ IW+ARN +F +
Sbjct: 1268 DSSL-IRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRE 1326
Query: 1175 ---KLFCIAGVLDRAASLVSQSTLPFTLAASQEKDNLKRWRRPAENVVKVNVDAAVGQDR 1231
K A +QS Q +N WR P VK N DA +
Sbjct: 1327 SPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQK 1386
Query: 1232 F-AGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCL 1290
A G + R+H G ++ + +P AE +L A+ G+ +V E DC
Sbjct: 1387 LEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQ 1446
Query: 1291 LLQQAWKKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVRREGNSCADYLARNASSY 1345
L +S +S L + ++D F + F+RR+GN A LA+ +Y
Sbjct: 1447 TLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTY 1501
>emb|CAB78094.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|4538901|emb|CAB39638.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
gi|7485606|pir||T04018 hypothetical protein F17A8.60 -
Arabidopsis thaliana
Length = 1274
Score = 657 bits (1694), Expect = 0.0
Identities = 422/1298 (32%), Positives = 643/1298 (49%), Gaps = 88/1298 (6%)
Query: 71 AGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLKDRTWEMIR 130
+GGL L W+ VEV I+ A+ + I D+ +V W+ I
Sbjct: 31 SGGLALYWKENVEVEILEAAPNFI-------DNRSV------------------FWDKIS 65
Query: 131 SVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFSGPSFTW 190
S+ WL GDFNDIL S+K GG + GL ++ +G S +W
Sbjct: 66 SLGAQRSSAWLLTGDFNDILDNSEKQGGPLRWEGFFLAFRSFVSQNGLWDINHTGNSLSW 125
Query: 191 TNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRHR 250
R + RLD AL N +W L+P+S +L SDH P+V + G+ + R
Sbjct: 126 RGTRYSHF-IKSRLDRALGNCSWSELFPMSKCEYLRFEGSDHRPLVTYFGAPPLK----R 180
Query: 251 TRMFRFEEVWLESGEECAEIISEGWSNTNL-SILSRINLVGRSLDSWGREKYGELPKRIK 309
++ FRF+ L EE ++ E W S+L +I+ +S+ W +E+ K IK
Sbjct: 181 SKPFRFDRR-LREKEEIRALVKEVWELARQDSVLYKISRCRQSIIKWTKEQNSNSAKAIK 239
Query: 310 EARAFLQR-LQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNTKFF 368
+A+ L+ L ++ ++ + + L+ +QEE+ W Q SR WL GDRN +F
Sbjct: 240 KAQQALESALSADIPDPSLIGSITQ---ELEAAYRQEELFWKQWSRVQWLNSGDRNKGYF 296
Query: 369 HSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLVDGR 428
H+ RR N + I+D +G++F + IA ++SYFQ IF+T N + ++ V +
Sbjct: 297 HATTRTRRMLNNLSVIEDGSGQEFHEEEQIASTISSYFQNIFTTSNNSDLQVVQEALSPI 356
Query: 429 VTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVL 488
++ L + +++EALF + KAPG DGF A F+ +W I+ D+S
Sbjct: 357 ISSHCNEELIKISSLLEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFF 416
Query: 489 QGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDLISE 548
+N+T + LIPK+ + YRPI+LCNV +KI++K + R++ L +LIS
Sbjct: 417 VDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISL 476
Query: 549 AQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTH 608
QSAFVPGR I DN LI E H+++ + + MA+K DMSKAYDR++W FL+ VL
Sbjct: 477 HQSAFVPGRAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMR 536
Query: 609 MGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALI 668
+GF W+ VM CV TV+++ ++NG+PQ + P RGLRQGDPLSPYLFILC E S L
Sbjct: 537 LGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLC 596
Query: 669 QKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKNILATYERASGQKIN 728
+K+ + GI+++R +P ++HLLFADD++ F + + NIL YE ASGQ IN
Sbjct: 597 RKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSIN 656
Query: 729 LEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKK 788
L KS ++ S P++ ++L L + KYLGLP G+ K IF + +R+ ++
Sbjct: 657 LAKSAITFSSKTPQDIKRRVKLSLRIDNEGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQR 716
Query: 789 LKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRG 848
W + LS AG+++L+K+V ++PSY M CF LP LC +I+S+++RF+W KR
Sbjct: 717 SHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRK 776
Query: 849 IHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVYF-SSGR 907
+ WV W + P + GGLGFR+ + AK WRI P SLL +V Y +S
Sbjct: 777 MAWVSWDKLTLPINEGGLGFREIE-------AKLSWRILKEPHSLLSRVLLGKYCNTSSF 829
Query: 908 MECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWLAN-------GPPVN 960
M+C+ S+ W IL +++KG W IG+G + +W + WL+ GPP
Sbjct: 830 MDCSASPSFASHGWRGILAGRDLLRKGLGWSIGQGDSINVWTEAWLSPSSPQTPIGPPTE 889
Query: 961 FRQDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLG 1020
+D+ V DL+ + WNV I P +I + + P D L WL
Sbjct: 890 TNKDL-------SVHDLICHDVKSWNVEAIR-KHLPQYEDQIRKITINALPLQDSLVWLP 941
Query: 1021 TADGLYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVREVSWRVCTGA 1080
G Y+ KTGY + P+S LD K WK + P+V+ W+ GA
Sbjct: 942 VKSGEYTTKTGYALAK---LNSFPASQ----LDFNWQKNIWKIHTSPKVKHFLWKAMKGA 994
Query: 1081 LPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCWFASPM------GVRVDPS 1134
LPV L +R ++ + +C CG + E+ HL L C + W +P+ +
Sbjct: 995 LPVGEALSRRNIEAEVTCKRCG-QTESSLHLMLLCPYAKKVWELAPVLFNPSEATHSSVA 1053
Query: 1135 LKMVDFLTMV-IRDMDLEVVACVQRFLFAIWEARNKHIFE-----EKLFCIAGVLDRAAS 1188
L +VD MV + L L+ +W+ARN+ IF+ E+ + +LD A
Sbjct: 1054 LLLVDAKRMVALPPTGLGSAPLYPWLLWHLWKARNRLIFDNHSCSEEGLVLKAILDARAW 1113
Query: 1189 LVSQSTLPFTLAASQEKDNLKRWRRPAEN--VVKVNVDAAVGQDRFAGFGLVARDHAGEV 1246
+ +Q + + + P N V VDAA + G G +D
Sbjct: 1114 MEAQLLI-------HHPSPISDYPSPTPNLKVTSCFVDAAWTTSGYCGMGWFLQDPYKVK 1166
Query: 1247 LAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCLLLQQAWKKVSGNSYLF 1306
+ V S +AE L++ A+ A+ G R++ +DC L L
Sbjct: 1167 IKENQSSSSFVGSALMAETLAVHLALVDALSTGVRQLNVFSDCKELISLLNSGKSIVELR 1226
Query: 1307 SIIKDCHKLVVFFDHVDLTFVRREGNSCADYLARNASS 1344
++ D +L V F H+ F+ R N AD LA++A S
Sbjct: 1227 GLLHDIRELSVSFTHLCFFFIPRLSNVVADSLAKSALS 1264
>gb|AAP53315.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|37533452|ref|NP_921028.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|20279456|gb|AAM18736.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)]
Length = 1509
Score = 652 bits (1682), Expect = 0.0
Identities = 407/1195 (34%), Positives = 591/1195 (49%), Gaps = 148/1195 (12%)
Query: 113 LYGFPELHLKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQA 172
LYG K RTW +R + PWL GDFN+IL +K G + + A
Sbjct: 396 LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRHA 455
Query: 173 CADCGLQRVDFSGPSFTWTNNRVGP-GRVDERLDYALINQAWVNLWPVSSVSHLIRHQSD 231
DCGL + F G +FTW N+ G + E LD A+ N W ++P + V + SD
Sbjct: 456 LTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPEWRAMFPAARVINGDPRHSD 515
Query: 232 HNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEGWSNTNLSILSRINLVGR 291
H PV+ I L G+
Sbjct: 516 HRPVI-------------------------------------------------IELEGK 526
Query: 292 SLDSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQ 351
+ GR + + F EE + ++VV+ + L LL +
Sbjct: 527 NKGVRGRNGHNDF--------RFEAAWLEEEKFKEVVKEAWDVSAGLQGLLVHASLAGVA 578
Query: 352 RSRANWLKH--GDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEI 409
++W + GD ++R + + +E++ + RD + + Y E
Sbjct: 579 AGLSSWSSNVLGD----------LEKRLKKVKKELETCRRQPISRDQVVREEVLRYRLEK 628
Query: 410 FSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFY 469
N + +VD +V+ A L FTRE+V+EAL + KAPG DG PA FY
Sbjct: 629 LEQQN------LLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFY 682
Query: 470 QKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKI 529
+ W +VG+ ++ L+VL+G P N T IVLIPKV
Sbjct: 683 KACWDVVGEKVTVEVLEVLRGGAIPEGWNDTTIVLIPKV--------------------- 721
Query: 530 ISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLD 589
+ANR+K IL D+IS AQSAFVPGRLI+DN LIA+E HYM+ + SG+ G A KLD
Sbjct: 722 ----LANRLKKILPDVISPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLD 777
Query: 590 MSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQG 649
MSKAYDRVEW FL ++ +GF WVNL+M CV+TV + + +NG +F+P RGLRQG
Sbjct: 778 MSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQG 837
Query: 650 DPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEA 709
DPLSPYLF+LC E FSAL+ K+ LHGI+I + AP +SHLLFADDS++ RA EA
Sbjct: 838 DPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEA 897
Query: 710 ECIKNILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTI 769
+ ++ IL YE SGQ IN +KS + S N + L ++ + +KYLGLP
Sbjct: 898 QQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVF 957
Query: 770 IGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCN 829
+G+S+T+IF ++KER+W++++GWKE+ LSRAG+E+LIK+VAQ IP++ M CF L LC+
Sbjct: 958 VGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCD 1017
Query: 830 EIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNY 889
+I MI++++W +HW+ W + PK++GGLGFRD FNLA++AK WR+
Sbjct: 1018 QISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQD 1077
Query: 890 PDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWE 949
PDSL +V ++ YF G K+ SY W I K ++Q G WR+G+GS++ IW
Sbjct: 1078 PDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWA 1137
Query: 950 DNWLANG---PPVNFRQDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVP 1006
D W+ G P+ R + +TKV +L+ W+ L+ TF + I S+P
Sbjct: 1138 DPWIPRGWSRKPMTPRGANL----VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIP 1193
Query: 1007 LPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDS----PSSSLSRGLDQTLWKRFWK 1062
+ + E D L W A G ++VK+ Y+ +E+ + S P S D WK+ WK
Sbjct: 1194 VHVEME-DVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWK 1252
Query: 1063 APSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCW 1122
+++ WR+C L +R L RG+DVD+ C +CG +E HLF C + W
Sbjct: 1253 LGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVW 1312
Query: 1123 FA---SPMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRFLFAIWEARNKHIFEEKLFCI 1179
A + ++ + L + + E + + L+ W+ RN EEK
Sbjct: 1313 QALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAIV-CLWQWWKERN----EEK---- 1363
Query: 1180 AGVLDRAASLVSQSTLPFTLAASQEKDNLKRWRRPAENVVKVNVDAAVGQD-RFAGFGLV 1238
S WRRP N VK+N D A + + G+G V
Sbjct: 1364 ----------------------SPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFV 1401
Query: 1239 ARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETDCLLLQ 1293
RD G VL A A + AE ++ A+ A + G R++ ETD ++L+
Sbjct: 1402 IRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDSMMLR 1456
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase
Length = 1333
Score = 642 bits (1655), Expect = 0.0
Identities = 422/1324 (31%), Positives = 650/1324 (48%), Gaps = 71/1324 (5%)
Query: 6 MRLLSWNCRGLGNLE--AVRALRGLIHSQAPDIVFLMETKLFS---FEMQRHRGMGGLSN 60
M L+SWNC+GLG + + L + S P+++FLMETK S ++Q G +
Sbjct: 1 MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFT 60
Query: 61 IFPVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELH 120
+ P+ +GGL L W+ V++ I A + I F + V +YG P
Sbjct: 61 VNPI----GLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSH---EFYVSCVYGNPAFS 113
Query: 121 LKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQR 180
K WE I + PW +GDFN IL +K GG + T C +
Sbjct: 114 DKHLVWEKITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLE 173
Query: 181 VDFSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCG 240
+ G FTW + + RLD N+ W +P+S+ L + SDH PV++
Sbjct: 174 LPSIGNPFTW-GGKTNEMWIQSRLDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLV--- 229
Query: 241 SRRTETQRHRTRMFRFEEVWLESGEECAEIISEGWS----NTNLSILSRINLVGRSLDSW 296
R T+T+ FRF++ L + E I + W+ N NL +L ++ +L W
Sbjct: 230 -RLTKTKEEYRGNFRFDKR-LFNQPNVKETIVQAWNGSQRNENLLVLDKLKHCRSALSRW 287
Query: 297 GREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATR--EAEKNLDVLLKQEEIVWSQRSR 354
+E RI +ARA L E Q+ RA + +L EE+ WSQ+SR
Sbjct: 288 KKENNINSSTRITQARAAL----ELEQSSGFPRADLVFSLKNDLCKANHDEEVFWSQKSR 343
Query: 355 ANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCN 414
A W+ GD+NT FFH+ R + I+++ D NG + + + +YF ++F + +
Sbjct: 344 AKWMHSGDKNTSFFHASVKDNRGKQHIDQLCDVNGLFHKDEMNKGAIAEAYFSDLFKSTD 403
Query: 415 PTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWP 474
P+ ++ RVT++ L ++ ++ EA+F + + APG+DGF F+QK+W
Sbjct: 404 PSSFVDLFEDYQPRVTESMNNTLIAAVSKNEIREAVFAIRSSSAPGVDGFTGFFFQKYWS 463
Query: 475 IVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTI 534
I+ +++ P N T + L+PK KK RPISLC+V++KIISK +
Sbjct: 464 IICLQVTKEIQNFFLLGYFPKSWNFTHLCLLPKKKKPDKMTDLRPISLCSVLYKIISKIM 523
Query: 535 ANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAY 594
R++ L DL+S QSAFV RLI DN LIA E H ++ S G +A+K +MSKA+
Sbjct: 524 VRRLQPFLPDLVSPNQSAFVAERLIFDNILIAHEVVHGLRTHKSVSKGFIAIKSNMSKAF 583
Query: 595 DRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSP 654
DRVEW ++R++L +GF WV +M +++V+++V++N P RGLRQGDPLSP
Sbjct: 584 DRVEWNYVRALLDALGFHQKWVGWIMFMISSVSYSVLINDKAFGNIVPSRGLRQGDPLSP 643
Query: 655 YLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKN 714
+LF+LC E + L+ ++ L GI+ S + P I HLLFADDS+ +A +E IK+
Sbjct: 644 FLFVLCSEGLTHLMNRAERQGLLSGIRFSENGPAIHHLLFADDSLFMCKAVKEEVTVIKS 703
Query: 715 ILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSK 774
I Y +GQ+IN +KS +++ V E+C V +Q LG+ YLGLP SK
Sbjct: 704 IFKVYGDVTGQRINYDKSSITLGALVDEDCKVWIQAELGITNEGGASTYLGLPECFSGSK 763
Query: 775 TQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESM 834
Q+ ++K+R+ +L GW +TLS G+E L+K+ A A+ Y MSCF L C + S
Sbjct: 764 VQLLDYIKDRLKTRLSGWFARTLSMGGKETLLKAFALALLFYAMSCFKLTKTTCVNMTSA 823
Query: 835 ISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLL 894
+S F+W KR HWV + MC K GGLGFRD +SFN AL+AK WR+ +P+SL
Sbjct: 824 MSDFWWNALEHKRKTHWVSCEKMCLSKENGGLGFRDIESFNQALLAKQAWRLLQFPNSLF 883
Query: 895 GKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWL- 953
+ FKS Y+ A+ PSYAW IL ++ KG ++G GS +W D W+
Sbjct: 884 ARFFKSRYYDEEDFLDAELKATPSYAWRSILHGRDLLIKGFRKKVGNGSSTSVWMDPWIY 943
Query: 954 ANGPPVNFRQDVVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPES 1013
N P + ++ L L +V DL+ +R +E F PA I+ P
Sbjct: 944 DNDPRLPLQKHFSVNLDL-RVHDLINVEDRCRRRDRLEELFYPADIEIIVK-RNPVVSMD 1001
Query: 1014 DQLFWLGTADGLYSVKTGY---------EFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAP 1064
D WL + G YSVK+GY E ++E Q S + L ++ W
Sbjct: 1002 DFWVWLHSKSGEYSVKSGYWLAFQTNKPELIREARVQPSTNG---------LKEKIWSTL 1052
Query: 1065 SMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCWF- 1123
+ P+++ WR+ + ALPV ++ +RG+ +D C +CG E E+++H+ C++ R W
Sbjct: 1053 TSPKIKLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWAL 1112
Query: 1124 ----ASPMGVRVDPSLKMVDFLTMVIRDMDL---EVVACVQRFLFAIWEARNKHIFEEKL 1176
S G + + +L + ++ L ++ L+ +W+ R+K FE +
Sbjct: 1113 SGVPTSQFGFQNSSIFANIQYL-LELKGKGLIPEQIKKSWPWVLWRLWKNRDKLFFEGTI 1171
Query: 1177 FCIAGVLDRAASLVSQSTLPFTLAASQEKDNL-------KRWRRPAENVVKVNVDAA-VG 1228
F +++ V + L L AS + W P VK N+ G
Sbjct: 1172 FSPLKSIEKIRDDVQEWFLAQALVASVDAGETVCSAPCPSSWEPPPLGWVKCNISGVWSG 1231
Query: 1229 QDRFAGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAIQLGFRRVQFETD 1288
+ R G V RD G+VL + + + A ++WA+ + + R
Sbjct: 1232 KKRVCGGAWVLRDDHGKVLLHSRRAFSNLSVKKDALFCCVKWALRVCLATDSLRF----- 1286
Query: 1289 CLLL 1292
CLLL
Sbjct: 1287 CLLL 1290
>gb|AAX95232.1| retrotransposon protein, putative, unclassified [Oryza sativa
(japonica cultivar-group)] gi|62733010|gb|AAX95129.1|
retrotransposon protein, putative, unclassified [Oryza
sativa (japonica cultivar-group)]
Length = 1324
Score = 630 bits (1625), Expect = e-179
Identities = 345/884 (39%), Positives = 502/884 (56%), Gaps = 21/884 (2%)
Query: 6 MRLLSWNCRGLGNLEAVRALRGLIHSQAPDIVFLMETKLFSFEMQRHRGMGGLSNIFPVQ 65
M++++WNCRGLGN VR L L PDI+FL TK+ + ++Q R G+ N+
Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 507
Query: 66 CGRNRAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLKDRT 125
C + ++GGL + W+ E+ + + S + V+ D + +YG P KD T
Sbjct: 508 C-QGKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFW--WRFTGVYGEPRSDKKDLT 564
Query: 126 WEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFSG 185
W+ +R++ WLC+GDFN++L +K G + + Q C L + F+G
Sbjct: 565 WKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTG 624
Query: 186 PSFTWTNNR-VGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRT 244
FTW NN V G + ERLD A+ + W +P V SDH+PV++ +
Sbjct: 625 DPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVTTSNEVI 684
Query: 245 ETQRHRTRMFRFEEVWLESGEECAEIISEGWSNT----NLSILSRINLVGRSLDSWGREK 300
FRFE W E CA I+ W + ++ I V +L W +
Sbjct: 685 WNGGRSKPGFRFEAGWARE-EHCAPIVENAWKLSVGPRGGKVMDAIREVAANLWDWSKNF 743
Query: 301 YGELPKRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRSRANWLKH 360
G+L KRIK+A+ L+ + + + LD L +Q E+ W QR+ +WL+
Sbjct: 744 LGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQRANQHWLEK 803
Query: 361 GDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEE 420
GDRNTKFFH A++R+KRN I++++ D+G +A +++ +++++F+ P ++E
Sbjct: 804 GDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLDE 863
Query: 421 VATLVDGRVTDAHRRILSTPFTREDVEEALFQMHPTKAP-GLDGFPALFYQKFWPIVGDD 479
+ V RVT L T E++++AL + KAP G DG PALFY++FW VGDD
Sbjct: 864 LLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWECVGDD 923
Query: 480 ISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIANRMK 539
I L G P N T++VLIPKV RPISLCNV++KI SK +ANR+K
Sbjct: 924 IVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRLK 983
Query: 540 LILHDLISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEW 599
+L ++IS Q AFVP R+ITDN L+A+E H++K + G G A+K MSKAYDRVEW
Sbjct: 984 PLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEW 1043
Query: 600 PFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFIL 659
FL ++ +GF +WV +VM CVT+V + + +NG P GLRQGDP+SPYLF +
Sbjct: 1044 GFLEKMMLKLGFDRNWVFIVMKCVTSVTYRIKVNGEFTEQINPTGGLRQGDPISPYLFFI 1103
Query: 660 CGEAFSALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKNILATY 719
C E FS L+ + L IK+ ++AP I+HLLFADDS+L + A C++N+L+ Y
Sbjct: 1104 CAEGFSTLLNAAEERGDLSVIKVCQNAPSINHLLFADDSLLLLKTDEGSAACLQNVLSLY 1163
Query: 720 ERASGQKINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDS---YDKYLGLPTIIGKSKTQ 776
ER SG+ IN EKS + SRN+ E V+ Q+ +G + +KYLGLP +G+SK +
Sbjct: 1164 ERCSGETINKEKSSIMFSRNIKE---VNKQIFMGALDIGVGAWNEKYLGLPVYMGRSKAK 1220
Query: 777 IFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMIS 836
++KERVWKK++GWKE+ LSRAG++VLIK+VAQAIP++ MSCF L GLC+EI S+I
Sbjct: 1221 TSSYLKERVWKKIQGWKEKLLSRAGKDVLIKAVAQAIPAFAMSCFNLTKGLCDEITSLIC 1280
Query: 837 RFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFR-----DFKSFN 875
RF+W + +HW+ W+ +C K GG FR D FN
Sbjct: 1281 RFFWAQQERENKMHWIAWEHLCSRKEKGGFFFRRTTAGDLPEFN 1324
>pir||G86379 protein F5A9.24 [imported] - Arabidopsis thaliana
gi|9945082|gb|AAG03119.1| F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 621 bits (1601), Expect = e-176
Identities = 362/1030 (35%), Positives = 554/1030 (53%), Gaps = 18/1030 (1%)
Query: 70 RAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLKDRTWEMI 129
+ GGL LLW+S V+V + +++ V +V V +YG P+ + + WE I
Sbjct: 30 KCGGLALLWKSSVQVDLKFVD-KNLMDAQVQFGAVN--FCVSCVYGDPDRSKRSQAWERI 86
Query: 130 RSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFSGPSFT 189
+ W GDFNDIL +K GG + + C L + G FT
Sbjct: 87 SRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFT 146
Query: 190 WTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRH 249
W R G + RLD A N+ W +PVS+ + L SDH PV++ S +Q
Sbjct: 147 WAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMS----SQDS 201
Query: 250 RTRMFRFEEVWLESGEECAEIISEGWSN----TNLSILSRINLVGRSLDSWGREKYGELP 305
FRF++ +L E+ E I WS TN+S+ R+ +SL SW ++
Sbjct: 202 YRGQFRFDKRFLFK-EDVKEAIIRTWSRGKHGTNISVADRLRACRKSLSSWKKQNNLNSL 260
Query: 306 KRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNT 365
+I + A L++ Q V + + +K+L ++EE W Q+SR WL+ G+RN+
Sbjct: 261 DKINQLEAALEKEQSLVWP--IFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNS 318
Query: 366 KFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLV 425
K+FH+ Q R+R IE+++D NG +A V +YF +F + NP+G + + +
Sbjct: 319 KYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGL 378
Query: 426 DGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCL 485
RV++ L + ++++EA+F + P APG DG ALF+Q +W VG+ ++
Sbjct: 379 VPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVK 438
Query: 486 QVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDL 545
+ I P N T + LIPK + RPISLC+V++KIISK +A R++ L ++
Sbjct: 439 KFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEI 498
Query: 546 ISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSV 605
+S+ QSAFV RLITDN L+A E H +K S MA+K DMSKAYDRVEW +LRS+
Sbjct: 499 VSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSL 558
Query: 606 LTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFS 665
L +GF + WVN +M CV++V ++V++N P RGLRQGDPLSP+LF+LC E +
Sbjct: 559 LLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLT 618
Query: 666 ALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKNILATYERASGQ 725
L+ K+ AL GI+ S + P++ HLLFADDS+ +A+ +++ ++ IL Y A+GQ
Sbjct: 619 HLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQ 678
Query: 726 KINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERV 785
INL KS ++ V E ++ LG+ YLGLP SK + ++K+R+
Sbjct: 679 TINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRL 738
Query: 786 WKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDAS 845
+KL W + LS+ G+EVL+KSVA A+P + MSCF LP C +ES ++ F+W
Sbjct: 739 KEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDH 798
Query: 846 KRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVYFSS 905
R IHW W+ +C PK GGLGFRD +SFN AL+AK WR+ ++PD LL ++ KS YF +
Sbjct: 799 SRKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDA 858
Query: 906 GRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWL-ANGPPVNFRQD 964
A RPS+ W IL ++ KG R+G+G+ + +W D W+ NG +R++
Sbjct: 859 TDFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWIDDNGFRAPWRKN 918
Query: 965 VVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLGTADG 1024
++ ++ L KV L+ W+ ++ F P RI ++ P ++D W G
Sbjct: 919 LIYDVTL-KVKALLNPRTGFWDEEVLHDLFLPEDILRIKAIK-PVISQADFFVWKLNKSG 976
Query: 1025 LYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVREVSWRVCTGALPVR 1084
+SVK+ Y + +Q+ S + L + W + P+++ W+V +G LPV
Sbjct: 977 DFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFLWKVLSGILPVA 1036
Query: 1085 TKLRQRGVDV 1094
L RG+ +
Sbjct: 1037 ENLNGRGMSL 1046
>gb|AAF97969.1| F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 613 bits (1582), Expect = e-174
Identities = 374/1116 (33%), Positives = 575/1116 (51%), Gaps = 49/1116 (4%)
Query: 70 RAGGLCLLWRSEVEVTIINASLHHILFTVVHSDSVTVPMQVYALYGFPELHLKDRTWEMI 129
+ GGL LLW+S V+V + +++ V +V V +YG P+ + + WE I
Sbjct: 27 KCGGLALLWKSSVQVDLKFVD-KNLMDAQVQFGAVN--FCVSCVYGDPDRSKRSQAWERI 83
Query: 130 RSVRPMAPIPWLCIGDFNDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFSGPSFT 189
+ W GDFNDIL +K GG + + C L + G FT
Sbjct: 84 SRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFT 143
Query: 190 WTNNRVGPGRVDERLDYALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRH 249
W R G + RLD A N+ W +PVS+ + L SDH PV++ S +Q
Sbjct: 144 WAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMS----SQDS 198
Query: 250 RTRMFRFEEVWLESGEECAEIISEGWSN----TNLSILSRINLVGRSLDSWGREKYGELP 305
FRF++ +L E+ E I WS TN+S+ R+ +SL SW ++
Sbjct: 199 YRGQFRFDKRFLFK-EDVKEAIIRTWSRGKHGTNISVADRLRACRKSLSSWKKQNNLNSL 257
Query: 306 KRIKEARAFLQRLQEEVQTEQVVRATREAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNT 365
+I + A L++ Q V + + +K+L ++EE W Q+SR WL+ G+RN+
Sbjct: 258 DKINQLEAALEKEQSLVWP--IFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNS 315
Query: 366 KFFHSKATQRRKRNLIEEIQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLV 425
K+FH+ Q R+R IE+++D NG +A V +YF +F + NP+G + + +
Sbjct: 316 KYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGL 375
Query: 426 DGRVTDAHRRILSTPFTREDVEEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCL 485
RV++ L + ++++EA+F + P APG DG ALF+Q +W VG+ ++
Sbjct: 376 VPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVK 435
Query: 486 QVLQGDISPGMVNQTLIVLIPKVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDL 545
+ I P N T + LIPK + RPISLC+V++KIISK +A R++ L ++
Sbjct: 436 KFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEI 495
Query: 546 ISEAQSAFVPGRLITDNALIAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSV 605
+S+ QSAFV RLITDN L+A E H +K S MA+K DMSKAYDRVEW +LRS+
Sbjct: 496 VSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSL 555
Query: 606 LTHMGFPVHWVNLVMNCVTTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFS 665
L +GF + WVN +M CV++V ++V++N P RGLRQGDPLSP+LF+LC E +
Sbjct: 556 LLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLT 615
Query: 666 ALIQKSISTSALHGIKISRSAPVISHLLFADDSVLFARATVQEAECIKNILATYERASGQ 725
L+ K+ AL GI+ S + P++ HLLFADDS+ +A+ +++ ++ IL Y A+GQ
Sbjct: 616 HLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQ 675
Query: 726 KINLEKSMLSVSRNVPENCFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERV 785
INL KS ++ V E ++ LG+ YLGLP SK + ++K+R+
Sbjct: 676 TINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRL 735
Query: 786 WKKLKGWKEQTLSRAGREVLIKSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDAS 845
+KL W + LS+ G+EVL+KSVA A+P + MSCF LP C +ES ++ F+W
Sbjct: 736 KEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDH 795
Query: 846 KRGIHWVKWKTMCQPKHVGGLGFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVYFSS 905
R IHW W+ +C PK GGLGFRD +SFN AL+AK WR+ ++PD LL ++ KS YF +
Sbjct: 796 SRKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDA 855
Query: 906 GRMECAKKGYRPSYAWSRILKTSAMIQKGSCWRIGEGSRVRIWEDNWL-ANGPPVNFRQD 964
A RPS+ W IL ++ KG R+G+G+ + +W D W+ NG +R++
Sbjct: 856 TDFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWIDDNGFRAPWRKN 915
Query: 965 VVDELGLTKVADLMLSGNRGWNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLGTADG 1024
++ ++ L KV L+ W+ ++ F P RI ++ P ++D W G
Sbjct: 916 LIYDVTL-KVKALLNPRTGFWDEEVLHDLFLPEDILRIKAIK-PVISQADFFVWKLNKSG 973
Query: 1025 LYSVKTGYEFLQEVVAQDSPSSSLSRGLDQTLWKRFWKAPSMPRVREVSWRVCTGALPVR 1084
+SVK+ Y + +Q+ S + L + W + P+++ W+V
Sbjct: 974 DFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFLWKV-------- 1025
Query: 1085 TKLRQRGVDVDSSCPLCGLEDETVDHLFLGCNITRGCWFAS-----PMGVRVDPSLKMVD 1139
CG E+ +H C ++R W S P G ++
Sbjct: 1026 ----------------CGELGESTNHTLFLCPLSRQIWALSDYPFPPDGFSNGSIYSNIN 1069
Query: 1140 FL--TMVIRDMDLEVVACVQRFLFAIWEARNKHIFE 1173
L ++ + + L+ IW+ RN IFE
Sbjct: 1070 HLLENKDNKEWPINLRKIFPWILWRIWKNRNSFIFE 1105
>ref|XP_475290.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|49328177|gb|AAT58873.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1264
Score = 611 bits (1576), Expect = e-173
Identities = 323/750 (43%), Positives = 466/750 (62%), Gaps = 12/750 (1%)
Query: 157 GGAPPDLARLQVATQACADCGLQRVDFSGPSFTWTNNR-VGPGRVDERLDYALINQAWVN 215
GGAP + + QA DC L + F G +FTW N+ + + ERLD A+ N AW
Sbjct: 488 GGAPRSESCMAKFRQALEDCQLHDLGFVGDAFTWRNHHHLASNYIKERLDRAVANGAWRA 547
Query: 216 LWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRHRTR---MFRFEEVWLESGEECAEIIS 272
+P+ V + SDH V++ G+ TE Q+ M +FE WLE EEC +
Sbjct: 548 RFPLVRVINGDPRHSDHRSVIVETGA--TEKQQWGQPLEIMQKFEARWLEE-EECQARVE 604
Query: 273 EGWSNTNLSILSRI----NLVGRSLDSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVV 328
E W N +R+ + V + L +W R GEL KR+K R L++ + E + + V
Sbjct: 605 EAWENALEGGQTRLMEIQSRVLKELWAWDRTVLGELKKRVKNLRKELEKCRREPISNRQV 664
Query: 329 RATREAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDN 388
L+ LL Q+ I W QR+ + WL GDRNTKFFH++A++++KRN I+++QD +
Sbjct: 665 NREHLLRYKLERLLDQQHIYWKQRAHSTWLTKGDRNTKFFHAQASEKKKRNTIQKLQDGH 724
Query: 389 GRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTREDVEE 448
G V + +++ +Q++F + + ++ V V RVT R L+ P+ RE+V
Sbjct: 725 GG-LVAGNQLKSFISNQYQQLFRSNGCSQMDAVLQCVQARVTPEMREGLAAPYQREEVWV 783
Query: 449 ALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKV 508
AL M KAPG DG PA+FY+KF + GD + + L VL G P N T++VLIPK
Sbjct: 784 ALKDMGDLKAPGADGIPAIFYKKFLSLAGDKVKDEVLAVLNGGDMPQGWNDTVVVLIPKT 843
Query: 509 KKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIAFE 568
K+ RPISLCNV +K+ISK I NR+K++L ++IS +QSAFVP RLIT N L+A+E
Sbjct: 844 KQPDTLKDLRPISLCNVAYKLISKVIVNRLKVVLLEIISPSQSAFVPRRLITYNVLLAYE 903
Query: 569 CFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNF 628
HY+ +R G++G+ A+KLDMSKAYDRVEW FLR ++ +GF WVNLVM CVT+V +
Sbjct: 904 LTHYLNQRKKGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWVNLVMKCVTSVTY 963
Query: 629 AVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSAPV 688
+ +NG P RGLRQGDPLSPYLFI+C E SAL+QK+ + + GIK+ R P
Sbjct: 964 RIKINGEHSDQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGKIEGIKVCRDTPR 1023
Query: 689 ISHLLFADDSVLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPENCFVDL 748
I+HL FADDS++ RA +A+ ++ +L YE ASGQ IN +KS + S N ++ +++
Sbjct: 1024 INHLFFADDSLVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLFSPNTLQSDRMEV 1083
Query: 749 QLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKS 808
+ L + ++YLGLP IGKS+ + F ++K +VW +++GW+E+ LS+AG+E+L+K+
Sbjct: 1084 RSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGKEILVKA 1143
Query: 809 VAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGF 868
VAQAIP+Y MSCF L GLC+EI SMIS+++W + + IHW+ W+ M PK +GG GF
Sbjct: 1144 VAQAIPTYAMSCFDLTKGLCDEINSMISKWWWSQNDKENKIHWLSWEKMTLPKKLGGPGF 1203
Query: 869 RDFKSFNLALVAKNWWRIYNYPDSLLGKVF 898
RD FN+A++A+ WR+ DSL G+VF
Sbjct: 1204 RDLHLFNMAMLARQAWRLLLNVDSLCGQVF 1233
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411151|pir||H84465 hypothetical protein
At2g05200 [imported] - Arabidopsis thaliana
Length = 1229
Score = 604 bits (1558), Expect = e-171
Identities = 391/1204 (32%), Positives = 609/1204 (50%), Gaps = 40/1204 (3%)
Query: 147 NDILSPSDKLGGAPPDLARLQVATQACADCGLQRVDFSGPSFTWTNNRVGPGRVDERLDY 206
N+IL S+K GG P D + GL + +SG F+W R V +RLD
Sbjct: 36 NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRYD-WFVRQRLDR 94
Query: 207 ALINQAWVNLWPVSSVSHLIRHQSDHNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEE 266
A+ N +W+ +P +L SDH P+V+ R + R FRF+ L +
Sbjct: 95 AMSNNSWLESFPSGRSEYLRFEGSDHRPLVVFVDEARVK----RRGQFRFDNR-LRDNDV 149
Query: 267 CAEIISEGWSNT-NLSILSRINLVGRSLDSWGREKYGELPKRIKEARAFLQRLQEEVQTE 325
+I E W+N + S+L+++N R + +W R + + I++ Q+ EE T
Sbjct: 150 VNALIQETWTNAGDASVLTKMNQCRREIINWTRLQNLNSAELIEKT----QKALEEALTA 205
Query: 326 QVVRATR--EAEKNLDVLLKQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEE 383
T L+ K EE W QRSR WL GDRNT +FH+ RR +N +
Sbjct: 206 DPPNPTTIGALTATLEHAYKLEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTV 265
Query: 384 IQDDNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTR 443
++D NG + I+++++ YFQ+IF++ + V ++ V+ L+
Sbjct: 266 MEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPND 325
Query: 444 EDVEEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIV 503
E+V++A+F ++ +KAPG DGF A FY +W I+ D+ P +N+T I
Sbjct: 326 EEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIR 385
Query: 504 LIPKVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNA 563
LIPK YRPI+LCN+ +KI++K + RM+LIL LISE QSAFVPGR+I+DN
Sbjct: 386 LIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNV 445
Query: 564 LIAFECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCV 623
LI E H+++ + + MA+K DMSKAYDRVEW FL+ VL GF W++ V+ CV
Sbjct: 446 LITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECV 505
Query: 624 TTVNFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKIS 683
T+V+++ ++NG PQ P RGLRQGDPLSP LFILC E S L ++ L G+++S
Sbjct: 506 TSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVS 565
Query: 684 RSAPVISHLLFADDSVLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPEN 743
+ P ++HLLFADD++ F+++ + + IL+ Y +ASGQ IN KS ++ S P +
Sbjct: 566 INGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRS 625
Query: 744 CFVDLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGRE 803
++ +L ++ KYLGLP G+ K IF + +++ +K W + LS+AG++
Sbjct: 626 VKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQ 685
Query: 804 VLIKSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHV 863
V++K+V ++P Y MSCF LP LC +I+S+++RF+W R WV W + PK+
Sbjct: 686 VMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNA 745
Query: 864 GGLGFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVY-FSSGRMECAKKGYRPSYAWS 922
GGLGFRD + N +L+AK WR+ N P+SLL ++ Y SS MEC K +PS+ W
Sbjct: 746 GGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMEC-KLPSQPSHGWR 804
Query: 923 RILKTSAMIQKGSCWRIGEGSRVRIWEDNWLANGPPVNFRQDVVDELGLTKVADLMLSGN 982
I+ ++++G W I G +V IW D WL+ P+ + E +V+ L+
Sbjct: 805 SIIAGREILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREHQDLRVSALINQNT 864
Query: 983 RGWNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQD 1042
W+ I P + I +P P D+L WL G Y+ ++GY + V +
Sbjct: 865 LQWDWNKIA-VILPNYENLIKQLPAPSSRGVDKLAWLPVKSGQYTSRSGYG-IASVASIP 922
Query: 1043 SPSSSLSRGLDQTLWK-RFWKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLC 1101
P + + W+ WK ++P+++ + W+ ALPV +L +R + ++C C
Sbjct: 923 IPQTQFN-------WQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRC 975
Query: 1102 GLEDETVDHLFLGCNITRGCWFASPM-GVRVDPSLKMVDFLTMVIRDMDLEVVACVQRFL 1160
G + T HLF C W +P+ V P M+D L+++ + + L L
Sbjct: 976 GAPESTT-HLFFHCEFAAQVWELAPLQETTVPPGSSMLDALSLLKKAIILPPTGVTSAAL 1034
Query: 1161 FAIWEARNKHIFEEKLFCIAGVLDRAASLVSQSTLPFTLAASQEKDNLKRWRRPAENVVK 1220
F W I+ + +LD A +Q LP T L R +
Sbjct: 1035 FP-WIC---GIYGKLGTMTRAILDALAWQSAQRCLPKTRNVVHPISQLPVLR----SGYF 1086
Query: 1221 VNVDAA-VGQDRFAGFGLVARDHAGEVLAAAAKYPI---MVLSPTVAEALSLRWAMDLAI 1276
VDAA + Q AG G V + A + A Y + S AEA +++ A+ A+
Sbjct: 1087 CFVDAAWIAQSSLAGSGWVFQS-ATALEKETATYSAGCRRLPSALSAEAWAIKSALLHAL 1145
Query: 1277 QLGFRRVQFETDCLLLQQAWKKVSGNSYLFSIIKDCHKLVVFFDHVDLTFVRREGNSCAD 1336
QLG + +D + A + ++ ++ + L V F + F+ R N+ AD
Sbjct: 1146 QLGRTDLMVLSDSKSVVDALTSNISINEIYGLLMEIRALRVSFHSLCFNFISRSANAIAD 1205
Query: 1337 YLAR 1340
A+
Sbjct: 1206 ATAK 1209
>pir||G96509 protein F27F5.21 [imported] - Arabidopsis thaliana
gi|7767672|gb|AAF69169.1| F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 594 bits (1532), Expect = e-168
Identities = 316/777 (40%), Positives = 439/777 (55%), Gaps = 43/777 (5%)
Query: 331 TREAEKNLDVLLKQ----EEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQD 386
T E +L + LK+ EE W Q+SR+ W+K GD N+K+FH+ QRR RN I + D
Sbjct: 164 TSEEITDLTIRLKEAYIDEEQYWYQKSRSLWMKVGDNNSKYFHALTKQRRARNRIIGLHD 223
Query: 387 DNGRKFVRDADIARVLTSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTREDV 446
+NG+ F D D+ + SYF+ +F+ NP I E + V +TD L+TP T ++V
Sbjct: 224 ENGKWFAEDKDVQHIAVSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEV 283
Query: 447 EEALFQMHPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIP 506
ALF MHP KAPG DG ALF+QK W + D+ LQ + +N T I LIP
Sbjct: 284 RAALFLMHPEKAPGPDGMTALFFQKPWATIKMDMLFLVNSFLQDGVFDKQLNTTNICLIP 343
Query: 507 KVKKAVFANQYRPISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIA 566
K ++ + RPISLCNV +KIISK + R+K IL LISE SAFV GRLI+DN LIA
Sbjct: 344 KTERPTRMTELRPISLCNVGYKIISKILCQRLKKILPSLISETHSAFVEGRLISDNILIA 403
Query: 567 FECFHYMKKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTV 626
E FH ++ S + MA+K DMSKAYDRVEW F+ +L MGF W++ +M C+TTV
Sbjct: 404 QEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIMWCITTV 463
Query: 627 NFAVMLNGNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSA 686
+ V+LNG P+ P RGLRQGDPLSPYLFILC E A I+K+ + GIK++ ++
Sbjct: 464 QYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILCTEVLIANIRKAEQEKLITGIKVATAS 523
Query: 687 PVISHLLFADDSVLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPENCFV 746
P +SHLLFA+DS+ F +A ++ I IL YE SGQ IN KS + V ++
Sbjct: 524 PSVSHLLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMINFSKSSIQFGHKVGDDIKA 583
Query: 747 DLQLLLGVKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLI 806
+++ LG+ ++ YLGLP +G SKT+IF FV++R+ ++ GW + LS+ G+EV+I
Sbjct: 584 EIKSALGIHSIGGMGSYLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMI 643
Query: 807 KSVAQAIPSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGL 866
KSV +P+YVMSCF LP + +++ S +++F+W D RG+HW+ W +C K GGL
Sbjct: 644 KSVVAVLPTYVMSCFRLPKTITSKLTSAVAKFWWSSDGESRGMHWMAWNKLCSSKADGGL 703
Query: 867 GFRDFKSFNLALVAKNWWRIYNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRILK 926
GFR FN AL+AK WR+ PDSL KVFK YF K Y PSY W I+
Sbjct: 704 GFRSVNDFNSALLAKQLWRLITVPDSLFAKVFKGRYFRKSNPLDKLKSYSPSYGWRSIIS 763
Query: 927 TSAMIQKGSCWRIGEGSRVRIWEDNWL-ANGP-PVNFRQDVVDELGLTKVADLMLSGNRG 984
++++KG R+G G+ + +WED W+ A P P V+D KV +L+ S +
Sbjct: 764 ARSLVKKGLINRVGSGASISVWEDPWIPAQFPRPAISNGSVIDP--SLKVNNLIDSRSNF 821
Query: 985 WNVPLIEWTFCPATASRIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSP 1044
WN+ + F P I ++ L + D L +K
Sbjct: 822 WNIDFLNEIFVPEDVLLISAMHLGSSTKEDSL----------DIK--------------- 856
Query: 1045 SSSLSRGLDQTLWKRFWKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLC 1101
TL WK P++R W+V +G +PV LR+RG++ DS C C
Sbjct: 857 ----------TLKAHIWKVQCPPKLRHFLWQVLSGCVPVTENLRKRGINCDSGCARC 903
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411729|pir||H84542 hypothetical protein
At2g16680 [imported] - Arabidopsis thaliana
Length = 1319
Score = 577 bits (1488), Expect = e-163
Identities = 379/1269 (29%), Positives = 610/1269 (47%), Gaps = 62/1269 (4%)
Query: 40 METKLFSFEMQRHRGMGGLSNIFPVQCGRNRAGGLCLLWRSEVEVTIINASLHHILFTVV 99
M + F ++ R G I PV ++GGL + W++ +E+ + + + V
Sbjct: 1 MNSDQFLLKVFRWLGYDYFHTIEPV----GKSGGLAIFWKNHLEIDFLFEDKNLLDLKVS 56
Query: 100 HSDSVTVPMQVYALYGFPELHLKDRTWEMIRSVRPMAPIPWLCIGDFNDILSPSDKLGGA 159
V +YG P LHL+ + + S+ W IGDFNDILS KLGG
Sbjct: 57 QGKKSWF---VSCVYGNPVLHLRYLLLDKLSSIGVQRNSAWCMIGDFNDILSNDGKLGGP 113
Query: 160 PPDLARLQVATQACADCGLQRVDFSGPSFTWTNNRVGPGRVDERLDYALINQAWVNLWPV 219
++ Q +C + ++ SG SFTW R + +LD N W ++
Sbjct: 114 SRLISSFQPFKNMLLNCDMHQMGSSGNSFTWGGTR-NDQWIQCKLDRCFGNSEWFTMFSN 172
Query: 220 SSVSHLIRHQSDHNPVVLHCGSRRTETQRHRTRMFRFEEVWLESGEECAEIISEGWSNTN 279
S L + S H PV+++ Q F +++ + E +CA W
Sbjct: 173 SHQWFLEKLGSHHRPVLVNF----VNDQEVFRGQFCYDKRFAED-PQCAASTLSSWIGNG 227
Query: 280 LSILS----RINLVGRSLDSWGREKYGELPKRIKEARAFLQRLQEEVQTEQVVRATREA- 334
+S +S R+ +++ W + RI R+ L +E +++Q +R +
Sbjct: 228 ISDVSSSMLRMVKCRKAISGWKKNSDFNAQNRILRLRSEL----DEEKSKQYPCWSRISV 283
Query: 335 -EKNLDVLLKQEEIVWSQRSRANWLKHGDRNTKFFHSKATQRRKRNLIEEIQDDNGRKFV 393
+ L V ++EE W +S+ WL GDRN+KFF + R +N + + D+NG +
Sbjct: 284 IQTQLGVAFREEESFWRLKSKDKWLFGGDRNSKFFQAMVKANRTKNSLRFLVDENGNEHT 343
Query: 394 RDADIARVLTSYFQEIFSTCNPTGIEEVATLVDGRVTDAHRRILSTPFTREDVEEALFQM 453
+ + + + YF+ +F + P + RV++ + L+ T ++ A+F +
Sbjct: 344 LNREKGNIASVYFENLFMSSYPANSQSALDGFKTRVSEEMNQELTQAVTELEIHSAVFSI 403
Query: 454 HPTKAPGLDGFPALFYQKFWPIVGDDISEFCLQVLQGDISPGMVNQTLIVLIPKVKKAVF 513
+ AP +K G D E L + + P N T + LIPK
Sbjct: 404 NVESAP----------EKLECCQGSDYIEI-LGFFETGVLPQEWNHTHLYLIPKFTNPQR 452
Query: 514 ANQYRPISLCNVIFKIISKTIANRMKLILHDLISEAQSAFVPGRLITDNALIAFECFHYM 573
+ RPISLC+V++KIISK ++ ++K L ++S +QSAF RLI+DN LIA E H +
Sbjct: 453 MSDIRPISLCSVLYKIISKILSFKLKKHLPSIVSPSQSAFFAERLISDNILIAHEIVHSL 512
Query: 574 KKRISGRSGMMALKLDMSKAYDRVEWPFLRSVLTHMGFPVHWVNLVMNCVTTVNFAVMLN 633
+ M K DMSKAYDRVEW FL+ +L +GF W++ +M CVT+V ++V++N
Sbjct: 513 RTNDKISKEFMVFKTDMSKAYDRVEWSFLQEILVALGFNDKWISWIMGCVTSVTYSVLIN 572
Query: 634 GNPQPTFAPHRGLRQGDPLSPYLFILCGEAFSALIQKSISTSALHGIKISRSAPVISHLL 693
G P RG+RQGDP+SP+LF+LC EA ++Q++ ++ + GI+ + S P ++HLL
Sbjct: 573 GQHFGHITPERGIRQGDPISPFLFVLCTEALIHILQQAENSKKVSGIQFNGSGPSVNHLL 632
Query: 694 FADDSVLFARATVQEAECIKNILATYERASGQKINLEKSMLSVSRNVPENCFVDLQLLLG 753
F DD+ L RAT + E + L+ Y SGQ IN+EKS ++ V E+ ++ G
Sbjct: 633 FVDDTQLVCRATKSDCEQMMLCLSQYGHISGQLINVEKSSITFGVKVDEDTKRWIKNRSG 692
Query: 754 VKAVDSYDKYLGLPTIIGKSKTQIFRFVKERVWKKLKGWKEQTLSRAGREVLIKSVAQAI 813
+ KYLGLP + SK +F ++KE++ L GW ++TLS+ G+E+L+KS+A A+
Sbjct: 693 IHLEGGTGKYLGLPENLSGSKQDLFGYIKEKLQSHLSGWYDKTLSQGGKEILLKSIALAL 752
Query: 814 PSYVMSCFVLPDGLCNEIESMISRFYWGGDASKRGIHWVKWKTMCQPKHVGGLGFRDFKS 873
P Y+M+CF LP GLC ++ S++ F+W IHW+ K + PK +GG GF+D +
Sbjct: 753 PVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFSNKIHWIGGKKLTLPKSLGGFGFKDLQC 812
Query: 874 FNLALVAKNWWRIYNYPDSLLGKVFKSVYFSSGRMECAKKGYRPSYAWSRILKTSAMIQK 933
FN AL+AK WR+++ S++ ++FKS YF + A++G RPSY W IL ++
Sbjct: 813 FNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQGTRPSYTWRSILYGRELLNG 872
Query: 934 GSCWRIGEGSRVRIWEDNWLANG---PPVNFRQDVVDELGLTKVADLMLSGNRGWNVPLI 990
G IG G + +W D WL +G P+N + + KV+ L+ R WN+ +
Sbjct: 873 GLKRLIGNGEQTNVWIDKWLFDGHSRRPMNLHSLMNIHM---KVSHLIDPLTRNWNLKKL 929
Query: 991 EWTFCPATASRIMSVPLPRQPESDQLFWLGTADGLYSVKTGYEFLQEVVAQDSPSSSLSR 1050
F IM P D W GT +GLY+VK+GYE ++ +
Sbjct: 930 TELFHEKDVQLIMH-QRPLISSEDSYCWAGTNNGLYTVKSGYERSSRETFKNLFKEADVY 988
Query: 1051 GLDQTLWKRFWKAPSMPRVREVSWRVCTGALPVRTKLRQRGVDVDSSCPLCGLEDETVDH 1110
L+ + W ++P+++ W+ GAL V +LR RG+ C C E ET++H
Sbjct: 989 PSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINH 1048
Query: 1111 LFLGCNITRGCWFASPMGVRVDPSLKMVDFLTMVIRDMDLEVVACVQRF----------- 1159
L C R W S + F T + +++ V+ Q F
Sbjct: 1049 LLFQCPFARQVWALSLI------QAPATGFGTSIFSNIN-HVIQNSQNFGIPRHMRTVSP 1101
Query: 1160 --LFAIWEARNKHIFEEKLFCIAGVLDRAASLVSQSTLPFTLAASQEKDNLKRWRRPAEN 1217
L+ IW+ RNK +F+ + ++ +A + ++ + +W P
Sbjct: 1102 WLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEKSSGGVSPSEHKWNPPPAG 1161
Query: 1218 VVKVNVDAAVG-QDRFAGFGLVARDHAGEVLAAAAKYPIMVLSPTVAEALSLRWAMDLAI 1276
+K N+ A Q + AG V RD G+VL + + V S A+ S WA++
Sbjct: 1162 ELKCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRRSYSQVYSLFDAKIKSWDWALESMD 1221
Query: 1277 QLGFRRVQF 1285
F +V F
Sbjct: 1222 HFHFDKVTF 1230
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,345,744,963
Number of Sequences: 2540612
Number of extensions: 99012860
Number of successful extensions: 208441
Number of sequences better than 10.0: 1428
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 575
Number of HSP's that attempted gapping in prelim test: 204163
Number of HSP's gapped (non-prelim): 2248
length of query: 1366
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1225
effective length of database: 505,134,102
effective search space: 618789274950
effective search space used: 618789274950
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0048.9