BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0045.10
(257 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM76745.1| hypothetical protein [Arabidopsis thaliana] gi|61... 86 1e-15
gb|AAK62381.1| Unknown protein [Arabidopsis thaliana] 85 2e-15
gb|AAC83022.1| EST gb|R65024 comes from this gene. [Arabidopsis ... 78 2e-13
gb|AAM64669.1| unknown [Arabidopsis thaliana] 77 6e-13
ref|NP_565193.1| expressed protein [Arabidopsis thaliana] 77 6e-13
ref|NP_973846.1| expressed protein [Arabidopsis thaliana] gi|183... 75 2e-12
gb|AAL84987.1| At1g16840/F17F16.27 [Arabidopsis thaliana] gi|306... 74 4e-12
ref|XP_480814.1| unknown protein [Oryza sativa (japonica cultiva... 66 8e-10
emb|CAE02130.2| OSJNBa0035M09.14 [Oryza sativa (japonica cultiva... 55 2e-06
dbj|BAD45845.1| unknown protein [Oryza sativa (japonica cultivar... 46 0.001
gb|AAN13750.1| CG7467-PB, isoform B [Drosophila melanogaster] gi... 36 1.2
gb|AAS65166.1| CG7467-PC, isoform C [Drosophila melanogaster] gi... 36 1.2
gb|AAF55457.1| CG7467-PA, isoform A [Drosophila melanogaster] gi... 36 1.2
gb|AAC06254.1| eyelid [Drosophila melanogaster] 36 1.2
gb|EAM70954.1| Proton-translocating NADH-quinone oxidoreductase,... 34 3.5
gb|EAL85757.1| metalloreductase, putative [Aspergillus fumigatus... 33 7.8
>gb|AAM76745.1| hypothetical protein [Arabidopsis thaliana]
gi|61742592|gb|AAX55117.1| hypothetical protein
At2g19180 [Arabidopsis thaliana]
gi|21593481|gb|AAM65448.1| unknown [Arabidopsis
thaliana] gi|3176718|gb|AAD12033.1| expressed protein
[Arabidopsis thaliana] gi|18398961|ref|NP_565448.1|
expressed protein [Arabidopsis thaliana]
gi|7487282|pir||T00539 hypothetical protein At2g19180
[imported] - Arabidopsis thaliana
Length = 179
Score = 85.9 bits (211), Expect = 1e-15
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 13 YRNPFPSSNSMAVCHRHRSSRATKATLTEIDAEHEVT---LKMFDDLIQRILVKKATPDW 69
+ P ++ VC R S + EID+++E LK ++ ++RI+V +TPDW
Sbjct: 20 FNEPAITTPPNVVCFSRRFSSIPQVIELEIDSKNEAEAAILKKLNEFVRRIIVHNSTPDW 79
Query: 70 LPFLPGYSFWVPPRP-SPSSVVHLAHRFNSSDQPQDALNLESHHGWPDPNYFL---QGNA 125
LPF PG SFWVPP + + + +L + + +++L+L S +GWP ++F+ G++
Sbjct: 80 LPFAPGSSFWVPPHQITATKIANLVDKVTNPLTEEESLSLSSPYGWPCSSFFIPPPDGSS 139
Query: 126 PAHSGESGVELNLPEEGTVKVK 147
E+ VEL +P ++VK
Sbjct: 140 STQEEEASVELKIPGNEMLEVK 161
>gb|AAK62381.1| Unknown protein [Arabidopsis thaliana]
Length = 155
Score = 85.1 bits (209), Expect = 2e-15
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 25 VCHRHRSSRATKATLTEIDAEHEVT---LKMFDDLIQRILVKKATPDWLPFLPGYSFWVP 81
VC R S + EID+++E LK ++ ++RI+V +TPDWLPF PG SFWVP
Sbjct: 8 VCFSRRFSSIPQVIELEIDSKNEAEAAILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVP 67
Query: 82 PRP-SPSSVVHLAHRFNSSDQPQDALNLESHHGWPDPNYFL---QGNAPAHSGESGVELN 137
P + + + +L + + +++L+L S +GWP ++F+ G++ E+ VEL
Sbjct: 68 PHQITATKIANLVDKVTNPLTEEESLSLSSPYGWPCSSFFIPPPDGSSSTQEEEASVELK 127
Query: 138 LPEEGTVKVK 147
+P ++VK
Sbjct: 128 IPGNEMLEVK 137
>gb|AAC83022.1| EST gb|R65024 comes from this gene. [Arabidopsis thaliana]
gi|25364101|pir||D96818 hypothetical protein F9K20.6
[imported] - Arabidopsis thaliana
Length = 156
Score = 78.2 bits (191), Expect = 2e-13
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 18 PSSNSMAVCHRHRSSRATK---ATLTEIDAEHEVTLKMFDDLIQRILVKKATPDWLPFLP 74
PSS ++ + + + R+ + EID + + +D + RI+V+++ PDWLPF+P
Sbjct: 24 PSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADPLVNKLEDAVHRIMVRRSAPDWLPFVP 83
Query: 75 GYSFWVPPRPSPS-SVVHLAHRFNSSDQPQDALNLESHHGWPDPNYFLQGNAPAHSGESG 133
G SFWVPP S S + L + + ++++++ S GWP +YF++G S E+
Sbjct: 84 GASFWVPPPRSQSHGIAKLVEKLANPISDEESISISSVRGWPCSDYFIKGGVKPQSVETE 143
Query: 134 VELN 137
+ N
Sbjct: 144 MTSN 147
>gb|AAM64669.1| unknown [Arabidopsis thaliana]
Length = 155
Score = 76.6 bits (187), Expect = 6e-13
Identities = 36/113 (31%), Positives = 64/113 (55%), Gaps = 4/113 (3%)
Query: 18 PSSNSMAVCHRHRSSRATK---ATLTEIDAEHEVTLKMFDDLIQRILVKKATPDWLPFLP 74
PSS ++ + + + R+ + EID + + +D + RI+V+++ PDWLPF+P
Sbjct: 24 PSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADPLVNKLEDAVHRIMVRRSAPDWLPFVP 83
Query: 75 GYSFWVPPRPSPS-SVVHLAHRFNSSDQPQDALNLESHHGWPDPNYFLQGNAP 126
G SFWVPP S S + L + + ++++++ S GWP +YF++G P
Sbjct: 84 GASFWVPPPRSQSHGIAKLVEKLANPISDEESISISSVRGWPCSDYFIKGVKP 136
>ref|NP_565193.1| expressed protein [Arabidopsis thaliana]
Length = 155
Score = 76.6 bits (187), Expect = 6e-13
Identities = 36/113 (31%), Positives = 64/113 (55%), Gaps = 4/113 (3%)
Query: 18 PSSNSMAVCHRHRSSRATK---ATLTEIDAEHEVTLKMFDDLIQRILVKKATPDWLPFLP 74
PSS ++ + + + R+ + EID + + +D + RI+V+++ PDWLPF+P
Sbjct: 24 PSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADPLVNKLEDAVHRIMVRRSAPDWLPFVP 83
Query: 75 GYSFWVPPRPSPS-SVVHLAHRFNSSDQPQDALNLESHHGWPDPNYFLQGNAP 126
G SFWVPP S S + L + + ++++++ S GWP +YF++G P
Sbjct: 84 GASFWVPPPRSQSHGIAKLVEKLANPISDEESISISSVRGWPCSDYFIKGVKP 136
>ref|NP_973846.1| expressed protein [Arabidopsis thaliana]
gi|18394407|ref|NP_564007.1| expressed protein
[Arabidopsis thaliana] gi|30685032|ref|NP_849677.1|
expressed protein [Arabidopsis thaliana]
gi|15450363|gb|AAK96475.1| At1g16840/F17F16.27
[Arabidopsis thaliana] gi|25364103|pir||F86303
hypothetical protein F6I1.16 - Arabidopsis thaliana
gi|9802780|gb|AAF99849.1| Unknown protein [Arabidopsis
thaliana]
Length = 161
Score = 74.7 bits (182), Expect = 2e-12
Identities = 43/135 (31%), Positives = 71/135 (51%), Gaps = 14/135 (10%)
Query: 6 FSKVKPLYRNPFPSSNSMAVCHRHRSSRATKAT-----LTEIDAE------HEVTLKMFD 54
FS+ L + F +++S + H S ++++ L EID + ++ +
Sbjct: 5 FSRSLSLSKGRFAAASSSLLPSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLE 64
Query: 55 DLIQRILVKKATPDWLPFLPGYSFWVPPRPSPS---SVVHLAHRFNSSDQPQDALNLESH 111
D + RI V++A PDWLPF+PG S+WVPP S S + L + + +++L+ S
Sbjct: 65 DAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSS 124
Query: 112 HGWPDPNYFLQGNAP 126
HGWP +YFL+G P
Sbjct: 125 HGWPSSDYFLKGVQP 139
>gb|AAL84987.1| At1g16840/F17F16.27 [Arabidopsis thaliana]
gi|30685027|ref|NP_849676.1| expressed protein
[Arabidopsis thaliana] gi|16930409|gb|AAL31890.1|
At1g16840/F17F16.27 [Arabidopsis thaliana]
Length = 161
Score = 73.9 bits (180), Expect = 4e-12
Identities = 42/133 (31%), Positives = 71/133 (52%), Gaps = 14/133 (10%)
Query: 6 FSKVKPLYRNPFPSSNSMAVCHRHRSSRATKAT-----LTEIDAE------HEVTLKMFD 54
FS+ L + F +++S + H S ++++ L EID + ++ +
Sbjct: 5 FSRSLSLSKGRFAAASSSLLPSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSDPLIQKLE 64
Query: 55 DLIQRILVKKATPDWLPFLPGYSFWVPPRPSPS---SVVHLAHRFNSSDQPQDALNLESH 111
D + RI V++A PDWLPF+PG S+WVPP S S + L + + +++L+ S
Sbjct: 65 DAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLSTNSS 124
Query: 112 HGWPDPNYFLQGN 124
HGWP +YFL+G+
Sbjct: 125 HGWPSSDYFLKGS 137
>ref|XP_480814.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|38175698|dbj|BAD01407.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 182
Score = 66.2 bits (160), Expect = 8e-10
Identities = 34/118 (28%), Positives = 55/118 (45%), Gaps = 22/118 (18%)
Query: 31 SSRATKATLTEIDAEHEVTLKMFDDLIQRILVKKATPDWLPFLPGYSFWVPPRPSPSSVV 90
SS +T + + V ++ ++ I ++V++A PDWLPF+PG SFWVPP P V
Sbjct: 47 SSASTSGPASSPASVEVVGVRRLEEAIHGVMVRRAAPDWLPFVPGGSFWVPPMRRPHGVA 106
Query: 91 HLAHRFNSSDQ----------------------PQDALNLESHHGWPDPNYFLQGNAP 126
L R ++ ++AL+ + GWP +YF++G P
Sbjct: 107 DLVGRIAAAASGADAEVVAGGLAYEPEVYAPMTEEEALSFSTARGWPSASYFVEGKFP 164
>emb|CAE02130.2| OSJNBa0035M09.14 [Oryza sativa (japonica cultivar-group)]
gi|50928569|ref|XP_473812.1| OSJNBa0035M09.14 [Oryza
sativa (japonica cultivar-group)]
Length = 170
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 47 EVTLKMFDDLIQRILVKKATPDWLPFLPGYSFWVPP--RPSPSSVVHLAHR------FNS 98
E+ ++ +D I +LV++A P+WLPF+PG S+WVP R + +V A R +N+
Sbjct: 64 EMGMRRLEDAIHGVLVRRAAPEWLPFVPGGSYWVPEMRRGVAADLVGTAVRSAIGAAWNA 123
Query: 99 SDQPQDALN-LESHHGWPDPNYFLQG 123
++ + L + GWP YF++G
Sbjct: 124 EAMTEEEMMCLTTMRGWPSEAYFVEG 149
>dbj|BAD45845.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|52077381|dbj|BAD46421.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 170
Score = 45.8 bits (107), Expect = 0.001
Identities = 31/116 (26%), Positives = 54/116 (45%), Gaps = 14/116 (12%)
Query: 31 SSRATKATLTEIDAEHEVTLKMFDDLIQRILVKKATPDWLPFLPGYSFWVPPRPSPSS-- 88
S+ +T E + + ++ I + + + P+W PF PG S++ PPRP+ ++
Sbjct: 51 SAAGGASTSEEAGSSSSAMARRMEEAIDGAMARMSEPEWAPFRPGTSYYAPPRPAGAARG 110
Query: 89 ----VVHLAHRFN------SSDQPQDALNLESHHGWPDPNYFLQGNAPAHSGESGV 134
V H A R S+D+ + A++ S G+P YF+ G+ P S V
Sbjct: 111 LLALVSHAAARMGPVPRALSADEAR-AVDAAS-RGFPCTTYFIDGHFPDEVERSDV 164
>gb|AAN13750.1| CG7467-PB, isoform B [Drosophila melanogaster]
gi|24647757|ref|NP_524392.2| CG7467-PB, isoform B
[Drosophila melanogaster]
gi|33301341|sp|Q8IN94|OSA_DROME Trithorax group protein
osa (Eyelid protein)
Length = 2716
Score = 35.8 bits (81), Expect = 1.2
Identities = 22/65 (33%), Positives = 28/65 (42%), Gaps = 4/65 (6%)
Query: 67 PDWLPFLPGYSFWVPPRPSPSSVVHLAHRFNSSDQ--PQDALNLESHHGWPDPNYFLQGN 124
P P PG PP P P++V+H H Q P + + HHG P P G
Sbjct: 68 PYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPP--PPGG 125
Query: 125 APAHS 129
AP H+
Sbjct: 126 APEHA 130
>gb|AAS65166.1| CG7467-PC, isoform C [Drosophila melanogaster]
gi|45553399|ref|NP_996228.1| CG7467-PC, isoform C
[Drosophila melanogaster]
Length = 2556
Score = 35.8 bits (81), Expect = 1.2
Identities = 22/65 (33%), Positives = 28/65 (42%), Gaps = 4/65 (6%)
Query: 67 PDWLPFLPGYSFWVPPRPSPSSVVHLAHRFNSSDQ--PQDALNLESHHGWPDPNYFLQGN 124
P P PG PP P P++V+H H Q P + + HHG P P G
Sbjct: 68 PYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPP--PPGG 125
Query: 125 APAHS 129
AP H+
Sbjct: 126 APEHA 130
>gb|AAF55457.1| CG7467-PA, isoform A [Drosophila melanogaster]
gi|24647755|ref|NP_732263.1| CG7467-PA, isoform A
[Drosophila melanogaster]
Length = 2703
Score = 35.8 bits (81), Expect = 1.2
Identities = 22/65 (33%), Positives = 28/65 (42%), Gaps = 4/65 (6%)
Query: 67 PDWLPFLPGYSFWVPPRPSPSSVVHLAHRFNSSDQ--PQDALNLESHHGWPDPNYFLQGN 124
P P PG PP P P++V+H H Q P + + HHG P P G
Sbjct: 68 PYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPP--PPGG 125
Query: 125 APAHS 129
AP H+
Sbjct: 126 APEHA 130
>gb|AAC06254.1| eyelid [Drosophila melanogaster]
Length = 2715
Score = 35.8 bits (81), Expect = 1.2
Identities = 22/65 (33%), Positives = 28/65 (42%), Gaps = 4/65 (6%)
Query: 67 PDWLPFLPGYSFWVPPRPSPSSVVHLAHRFNSSDQ--PQDALNLESHHGWPDPNYFLQGN 124
P P PG PP P P++V+H H Q P + + HHG P P G
Sbjct: 67 PYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPP--PPGG 124
Query: 125 APAHS 129
AP H+
Sbjct: 125 APEHA 129
>gb|EAM70954.1| Proton-translocating NADH-quinone oxidoreductase, chain M
[Desulfuromonas acetoxidans DSM 684]
Length = 530
Score = 34.3 bits (77), Expect = 3.5
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 17/74 (22%)
Query: 45 EHEVTLKMFDDLIQRILVKKATPDWLPFLPGYSFWVPPRPSP------SSVVHLAHRFNS 98
EH +T F + IQ L FL + FW+ P+P +SV HL H+ ++
Sbjct: 454 EHHLTDCNFREFIQ-----------LAFLTVFVFWIGLHPTPLLDMMDTSVAHLIHQVDA 502
Query: 99 SDQPQDALNLESHH 112
Q+A++ HH
Sbjct: 503 GSAVQEAVHHGEHH 516
>gb|EAL85757.1| metalloreductase, putative [Aspergillus fumigatus Af293]
Length = 703
Score = 33.1 bits (74), Expect = 7.8
Identities = 25/85 (29%), Positives = 41/85 (47%), Gaps = 8/85 (9%)
Query: 82 PRPSPSSVVHLAHRFNSSDQPQDALNLESHH-----GWPDPNYFLQGNAPAHSGESGVEL 136
P P+ ++ + +S QP+ A +SHH G P P ++ GES V +
Sbjct: 606 PIPTAAAETEETRQLKASAQPEPA---QSHHLNLLSGRPQPRIIIRKVLEKAEGESAVVV 662
Query: 137 NLPEEGTVKVKRVLLWLSDILSVGK 161
PE + V+R +++LSD +V K
Sbjct: 663 CGPEGLSDDVRRSVVYLSDERAVHK 687
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,017,594
Number of Sequences: 2540612
Number of extensions: 20248510
Number of successful extensions: 41769
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 41746
Number of HSP's gapped (non-prelim): 16
length of query: 257
length of database: 863,360,394
effective HSP length: 125
effective length of query: 132
effective length of database: 545,783,894
effective search space: 72043474008
effective search space used: 72043474008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0045.10