BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0043b.1
(188 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE59732.1| Hypothetical protein CBG03168 [Caenorhabditis br... 38 0.13
gb|EAA50662.1| hypothetical protein MG04421.4 [Magnaporthe grise... 35 1.4
emb|CAD26110.1| putative NUCLEAR PROTEIN OF THE SMC FAMILY [Ence... 34 1.8
ref|NP_951271.1| hypothetical protein GSU0210 [Geobacter sulfurr... 33 3.1
ref|XP_510861.1| PREDICTED: similar to hypothetical protein MGC3... 33 4.1
emb|CAG61335.1| unnamed protein product [Candida glabrata CBS138... 33 4.1
ref|NP_916576.1| putative transcription factor [Oryza sativa (ja... 33 4.1
gb|AAD00186.1| envoplakin [Homo sapiens] gi|3676059|gb|AAC64662.... 33 4.1
emb|CAI19553.1| involucrin [Homo sapiens] gi|44890059|ref|NP_005... 33 5.3
gb|EAL93064.1| palmitoyltransferase (SidR), putative [Aspergillu... 33 5.3
gb|AAH46391.1| Involucrin [Homo sapiens] gi|88036|pir||A24168 in... 33 5.3
ref|XP_394028.2| PREDICTED: similar to ENSANGP00000021020 [Apis ... 33 5.3
gb|AAC37266.1| blackjack [Schistocerca americana] gi|7511753|pir... 33 5.3
ref|XP_574051.1| PREDICTED: similar to Mki67 protein [Rattus nor... 32 7.0
ref|NP_635142.1| ATP-dependent protease La [Methanosarcina mazei... 32 7.0
ref|YP_001267.1| hypothetical protein LIC11301 [Leptospira inter... 32 7.0
ref|NP_712884.1| hypothetical protein LA2703 [Leptospira interro... 32 7.0
ref|XP_587641.1| PREDICTED: similar to Envoplakin (210 kDa paran... 32 7.0
gb|AAL92607.1| similar to Staphylococcus epidermidis. Putative c... 32 7.0
ref|XP_649781.1| Ras guanine nucleotide exchange factor, putativ... 32 7.0
>emb|CAE59732.1| Hypothetical protein CBG03168 [Caenorhabditis briggsae]
Length = 2898
Score = 38.1 bits (87), Expect = 0.13
Identities = 24/73 (32%), Positives = 39/73 (52%), Gaps = 3/73 (4%)
Query: 111 QEALKSEIDAWYVQIFCQEKSKEELLKEIRKKKEPKHPPAPQGPQPSQMELLMASMQRLE 170
QEA + E + W + +EK E + +E R+K PPAP PQ +++ L +S + E
Sbjct: 265 QEAAEKEWNQWKEYLQLEEKEPENVTEE-RQKTPEAEPPAP--PQTTRVLLASSSDEDQE 321
Query: 171 TTHGEMREENRAQ 183
GE++ E +Q
Sbjct: 322 KNGGELKSEEVSQ 334
>gb|EAA50662.1| hypothetical protein MG04421.4 [Magnaporthe grisea 70-15]
gi|39944878|ref|XP_361976.1| hypothetical protein
MG04421.4 [Magnaporthe grisea 70-15]
Length = 1783
Score = 34.7 bits (78), Expect = 1.4
Identities = 20/63 (31%), Positives = 33/63 (51%), Gaps = 2/63 (3%)
Query: 128 QEKSKEELLKEIRKKKE-PKHPPAPQGPQPSQMEL-LMASMQRLETTHGEMREENRAQYR 185
+EK KE+ + +++KKE P PP P+ P+P M + ++ L H +E +R
Sbjct: 1023 KEKEKEKEKEPVKEKKEAPAPPPVPEIPKPRTMPCDICRQLEPLGDQHITCKECRMTVHR 1082
Query: 186 ACY 188
CY
Sbjct: 1083 NCY 1085
>emb|CAD26110.1| putative NUCLEAR PROTEIN OF THE SMC FAMILY [Encephalitozoon
cuniculi GB-M1] gi|19075000|ref|NP_586506.1| putative
NUCLEAR PROTEIN OF THE SMC FAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 1025
Score = 34.3 bits (77), Expect = 1.8
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 91 LPSIITDLCKFHN-VPILSGHQEALKSEIDAWYVQIFCQEKSKEELLKEIRKKKEPKHPP 149
L ++ +L H +L +E+LK++ + + E+ K+E+L + + + PP
Sbjct: 291 LVKVVEELRDIHQETEMLGVDEESLKNKREKRMTNL---ERLKKEILDLQDEVSKVEIPP 347
Query: 150 APQGPQPSQMELLMASMQRLETTHGEMREEN 180
P+GP +++E+L M L G+++ E+
Sbjct: 348 QPRGPDEARIEVLEEKMSGLMRARGKIQHES 378
>ref|NP_951271.1| hypothetical protein GSU0210 [Geobacter sulfurreducens PCA]
gi|39982082|gb|AAR33544.1| conserved hypothetical
protein [Geobacter sulfurreducens PCA]
Length = 320
Score = 33.5 bits (75), Expect = 3.1
Identities = 20/84 (23%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
Query: 82 IQRDAPVMILPSIITDLCKFHNVPILSGHQEALKSE--IDAWYVQIFCQEKSKEELLKEI 139
+ D V+ S +TD+ + VP++S + +S + AW + ++ +++ EI
Sbjct: 205 VSTDNTVVSAMSALTDVAMKNKVPVMSADPSSAESHPVLAAWGFDYYKMGRATGKMVAEI 264
Query: 140 RKKKEPKHPPAPQGPQPSQMELLM 163
K K+P+ P + S ++LL+
Sbjct: 265 LKGKKPEQLPTRFMTKASDVDLLV 288
>ref|XP_510861.1| PREDICTED: similar to hypothetical protein MGC35048 [Pan
troglodytes]
Length = 496
Score = 33.1 bits (74), Expect = 4.1
Identities = 29/118 (24%), Positives = 50/118 (41%), Gaps = 8/118 (6%)
Query: 60 YSILEGHSVDIAAVMSNAIADAIQRDAPVMIL---PSIITDLCKFHNVPILSGHQEALKS 116
+ +L G + AV A A R P I+ PS T+ F P+ + + +
Sbjct: 170 FRLLPGRGLPANAVTVETAAMAAPRQIPSHIVRRKPSCSTN-SSFTRTPVPTVSLASREL 228
Query: 117 EIDAWYVQIFCQEKSKEELLKEIRKKKEPKHPPAPQGPQPSQMELLMASMQRLETTHG 174
+ +W V E S + L ++I K+ E + PP P+G + Q ++ + HG
Sbjct: 229 PVSSWQVA----EPSSKNLWEQICKEYEAEQPPFPEGYKVKQEPVITVAPVEEMLFHG 282
>emb|CAG61335.1| unnamed protein product [Candida glabrata CBS138]
gi|50291883|ref|XP_448374.1| unnamed protein product
[Candida glabrata]
Length = 615
Score = 33.1 bits (74), Expect = 4.1
Identities = 35/142 (24%), Positives = 54/142 (37%), Gaps = 20/142 (14%)
Query: 38 LLRNIWPSLHVTSLPVTKENLLYSILEGHSVDIAAVMSNAIADAIQRDAPVMI------- 90
L+ S + LP +E Y E D V+ D + P+M+
Sbjct: 466 LMAGFVESRSMDDLPRVEEKKYYEFYEDSVRDTTLVLPMKSKDETRERDPLMVPAMGLHR 525
Query: 91 --------LPSIITDLCKFHNVPILSGHQEALKSEIDAWYVQIFCQEKSKEELL--KEIR 140
L ++ + + + P L H LK++I V F + + LL K++
Sbjct: 526 QLQVMLEYLHQVVINKSEKFDPPELQDH---LKAKITPHIVSDFPELEELVNLLELKKVE 582
Query: 141 KKKEPKHPPAPQGPQPSQMELL 162
K + PPAP P PS ELL
Sbjct: 583 PKSKEFKPPAPAEPVPSLEELL 604
>ref|NP_916576.1| putative transcription factor [Oryza sativa (japonica
cultivar-group)]
Length = 307
Score = 33.1 bits (74), Expect = 4.1
Identities = 26/101 (25%), Positives = 43/101 (41%), Gaps = 4/101 (3%)
Query: 13 NEEEELTGGIPRRHMTQLSQVWTSLLLRNIWPSLHVTSLPVTKENLLYSILEGHSVDIAA 72
N ++ +P R ++ W S + + + S V SL + +L Y+IL+G IAA
Sbjct: 87 NRWAQIAKHLPGRTDNEVKNFWNSTIKKKLI-SQAVGSLHPSSADLYYNILDGAGQSIAA 145
Query: 73 VMSNAIADA---IQRDAPVMILPSIITDLCKFHNVPILSGH 110
NA+ +A + + P + S H L GH
Sbjct: 146 ASLNAVENAAHGVTQSPPSSVYNSAAWASFSSHQPIFLPGH 186
>gb|AAD00186.1| envoplakin [Homo sapiens] gi|3676059|gb|AAC64662.1| envoplakin
[Homo sapiens] gi|4503613|ref|NP_001979.1| envoplakin
[Homo sapiens] gi|14194715|sp|Q92817|EVPL_HUMAN
Envoplakin (210 kDa paraneoplastic pemphigus antigen)
(p210) (210 kDa cornified envelope precursor protein)
Length = 2033
Score = 33.1 bits (74), Expect = 4.1
Identities = 27/97 (27%), Positives = 40/97 (40%), Gaps = 22/97 (22%)
Query: 107 LSGHQEALKSEIDAWYVQIFCQEK----------------SKEELLKEIRKKKEPKHPPA 150
+ HQEALK E + CQE S + L ++ + K+ PA
Sbjct: 304 IQAHQEALKMEWQNFLNLCICQETQLQHVEDYRRFQEEADSVSQTLAKLNSNLDAKYSPA 363
Query: 151 PQGPQPSQMELLM---ASMQRLETTH---GEMREENR 181
P GP + ELL A +RL T G+++ +R
Sbjct: 364 PGGPPGAPTELLQQLEAEEKRLAVTERATGDLQRRSR 400
>emb|CAI19553.1| involucrin [Homo sapiens] gi|44890059|ref|NP_005538.2| involucrin
[Homo sapiens]
Length = 585
Score = 32.7 bits (73), Expect = 5.3
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 83 QRDAPVMILPSIITDLCKFHNVPILSGHQEALKSEIDAWYVQIFCQEKSKEELLKEIRKK 142
Q PV + P++ +L K P+ + HQE +K + CQ K EL E+ K
Sbjct: 4 QHTLPVTLSPALSQELLKTVPPPV-NTHQEQMKQPTP---LPPPCQ-KVPVELPVEVPSK 58
Query: 143 KEPKHPPAPQG--PQPSQMELLMASMQRLETTHGEMREE 179
+E KH A +G Q + + Q L+ H E EE
Sbjct: 59 QEEKHMTAVKGLPEQECEQQQKEPQEQELQQQHWEQHEE 97
>gb|EAL93064.1| palmitoyltransferase (SidR), putative [Aspergillus fumigatus Af293]
Length = 710
Score = 32.7 bits (73), Expect = 5.3
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 16 EELTGGIPRRHMTQLSQVWTSLLLRNIWPSLHVTSLPVTKENLLYSILEGHSVDIAAVMS 75
EEL G + R T + +W ++ L + V + +++ Y + GHS+D + S
Sbjct: 510 EELCGFVLRDPFTLVLDLWIAIQLVWVTMLCAVQLVQISRNQTTYENMRGHSIDRSYPSS 569
Query: 76 NAIADAI 82
A A AI
Sbjct: 570 RAFASAI 576
>gb|AAH46391.1| Involucrin [Homo sapiens] gi|88036|pir||A24168 involucrin - human
gi|386834|gb|AAA59186.1| involucrin
gi|124731|sp|P07476|INVO_HUMAN Involucrin
Length = 585
Score = 32.7 bits (73), Expect = 5.3
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 83 QRDAPVMILPSIITDLCKFHNVPILSGHQEALKSEIDAWYVQIFCQEKSKEELLKEIRKK 142
Q PV + P++ +L K P+ + HQE +K + CQ K EL E+ K
Sbjct: 4 QHTLPVTLSPALSQELLKTVPPPV-NTHQEQMKQPTP---LPPPCQ-KVPVELPVEVPSK 58
Query: 143 KEPKHPPAPQG--PQPSQMELLMASMQRLETTHGEMREE 179
+E KH A +G Q + + Q L+ H E EE
Sbjct: 59 QEEKHMTAVKGLPEQECEQQQKEPQEQELQQQHWEQHEE 97
>ref|XP_394028.2| PREDICTED: similar to ENSANGP00000021020 [Apis mellifera]
Length = 622
Score = 32.7 bits (73), Expect = 5.3
Identities = 25/79 (31%), Positives = 35/79 (43%), Gaps = 5/79 (6%)
Query: 111 QEALKSEIDAWYVQIFCQEKSKEELLKEIRKKKEPKHPPAPQGPQPSQMELLMASMQRLE 170
Q + S+ A V KS +EL I + K P+P P S +L M+RLE
Sbjct: 242 QATIGSDTPACPVCFSTSFKSNDELTAHIEEHFSKKCTPSPITPDLSTDRMLAKDMERLE 301
Query: 171 TTHGEMREEN-----RAQY 184
++RE+ RAQY
Sbjct: 302 KELRKLREQREFELLRAQY 320
>gb|AAC37266.1| blackjack [Schistocerca americana] gi|7511753|pir||T28657 blackjack
protein, microtubule associated - American bird
grasshopper
Length = 1547
Score = 32.7 bits (73), Expect = 5.3
Identities = 24/101 (23%), Positives = 51/101 (49%), Gaps = 3/101 (2%)
Query: 49 TSLPVTKE-NLLYSILEGHSVDIAAVMSNA--IADAIQRDAPVMILPSIITDLCKFHNVP 105
T +P E N I+E ++++ +++ I+ I ++P+ +L ++ T+L +
Sbjct: 440 TDVPKAGEANENVDIVEQKPTEVSSDLASGAPISQIISSESPIELLDTVKTELTELDKDT 499
Query: 106 ILSGHQEALKSEIDAWYVQIFCQEKSKEELLKEIRKKKEPK 146
+ S H+ AL +E D+ + E+ +E L K + +K K
Sbjct: 500 LSSEHERALLAEADSELSESRSCEQLEEYLSKSSQNEKSEK 540
>ref|XP_574051.1| PREDICTED: similar to Mki67 protein [Rattus norvegicus]
Length = 312
Score = 32.3 bits (72), Expect = 7.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 137 KEIRKKKEPKHPPAPQGPQPSQMELLMASMQRLETTHGEMREENRAQYR 185
+E KEP P PQP Q++ L S +R T HG+ + + R
Sbjct: 34 EESASDKEPTQIPCINSPQPEQVDSLQPSPRRPRTRHGKEEADKPSAVR 82
>ref|NP_635142.1| ATP-dependent protease La [Methanosarcina mazei Go1]
gi|20907791|gb|AAM32814.1| ATP-dependent protease La
[Methanosarcina mazei Goe1]
Length = 795
Score = 32.3 bits (72), Expect = 7.0
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 51 LPVTKENLLYSILEGHSVD-----IAAVMSNAIADAIQRDAPVMILPSIITDLCKFHNVP 105
L + K++LL SILE H +D I I D R+A V L + +F +
Sbjct: 502 LAIAKDHLLPSILEDHGLDADKLQIEDEALKVIIDKYTREAGVRGLKKQLAKTARFVSEK 561
Query: 106 ILSGHQEALKSEIDAWYVQIFCQEKSKEELLKEIRKKKEPKHPPAP 151
I+SG ++D YV + KE L KEI +++E + P
Sbjct: 562 IVSG-------KVDLPYV--VKADMLKEILGKEIIRQEEARKENVP 598
>ref|YP_001267.1| hypothetical protein LIC11301 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600419|gb|AAS69904.1| conserved hypothetical
protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 269
Score = 32.3 bits (72), Expect = 7.0
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 47 HVTSLPVTKENLLYSILEGHSVDIAAVMSNAIADAIQRDAPVMILPSIITDLCKFHNVPI 106
H + +E +L +L+ + + SN+I + + D PV+ P D + PI
Sbjct: 61 HKEIMDQAEEEILEELLQNGDIQTSTDSSNSIEEDLNEDVPVLEPPIFSMDSTNEPDFPI 120
Query: 107 LSGHQEALKSEIDAWYVQIFCQ-EKSKEELLKEIRKKK 143
S K E+ ++++ + + KS L+K +R K
Sbjct: 121 PSE-----KGELSLFFLKFYGKGSKSHSRLVKVLRLSK 153
>ref|NP_712884.1| hypothetical protein LA2703 [Leptospira interrogans serovar Lai
str. 56601] gi|24196520|gb|AAN49902.1| conserved
hypothetical protein [Leptospira interrogans serovar lai
str. 56601]
Length = 269
Score = 32.3 bits (72), Expect = 7.0
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 47 HVTSLPVTKENLLYSILEGHSVDIAAVMSNAIADAIQRDAPVMILPSIITDLCKFHNVPI 106
H + +E +L +L+ + + SN+I + + D PV+ P D + PI
Sbjct: 61 HKEIMDQAEEEILEELLQNGDIQTSTDSSNSIEEDLNEDVPVLEPPIFSMDSTNEPDFPI 120
Query: 107 LSGHQEALKSEIDAWYVQIFCQ-EKSKEELLKEIRKKK 143
S K E+ ++++ + + KS L+K +R K
Sbjct: 121 PSE-----KGELSLFFLKFYGKGSKSHSRLVKVLRLSK 153
>ref|XP_587641.1| PREDICTED: similar to Envoplakin (210 kDa paraneoplastic pemphigus
antigen) (p210) (210 kDa cornified envelope precursor
protein), partial [Bos taurus]
Length = 1892
Score = 32.3 bits (72), Expect = 7.0
Identities = 20/72 (27%), Positives = 31/72 (42%), Gaps = 16/72 (22%)
Query: 107 LSGHQEALKSEIDAWYVQIFCQEK----------------SKEELLKEIRKKKEPKHPPA 150
+ HQEALK E + CQE S + L ++ + ++ PA
Sbjct: 232 IQAHQEALKVEWQNFLNLCICQESQLQHVEDYRRFQEEADSVSQTLAKLNSSLDSQYSPA 291
Query: 151 PQGPQPSQMELL 162
P+GP + ME+L
Sbjct: 292 PEGPPGALMEML 303
>gb|AAL92607.1| similar to Staphylococcus epidermidis. Putative cell-surface adhesin
SdrF [Dictyostelium discoideum]
gi|66821589|ref|XP_644251.1| colossin B [Dictyostelium
discoideum] gi|60472050|gb|EAL70003.1| colossin B
[Dictyostelium discoideum]
Length = 3763
Score = 32.3 bits (72), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 65 GHSVDIAAVMSNAIADAIQRDAPVMILPSIITDLCKFHNVPILSGHQEALKSEIDAW 121
G +V + +N+IA ++ + +L +++T F NVPIL G+Q S W
Sbjct: 2848 GGAVIVQLYRNNSIATDLRGNPIPSVLTNVLTGEYLFDNVPILEGYQVMFSSPPPGW 2904
>ref|XP_649781.1| Ras guanine nucleotide exchange factor, putative [Entamoeba
histolytica HM-1:IMSS] gi|56466282|gb|EAL44394.1| Ras
guanine nucleotide exchange factor, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 1166
Score = 32.3 bits (72), Expect = 7.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 91 LPSIITDLCKFHNVPILSGHQEALKSEIDAWYVQIFCQEKSKEELLKEIRKK 142
L I D + P L GH +A++ I++ V+I C E+++ +L +I K+
Sbjct: 456 LAHYIVDWVQCQKYPYLFGHNQAMQEWIESHLVKINCNEENEYQLSIQIEKE 507
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,303,861
Number of Sequences: 2540612
Number of extensions: 12013584
Number of successful extensions: 53632
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 53615
Number of HSP's gapped (non-prelim): 30
length of query: 188
length of database: 863,360,394
effective HSP length: 120
effective length of query: 68
effective length of database: 558,486,954
effective search space: 37977112872
effective search space used: 37977112872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0043b.1