BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0042.2
(173 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_467615.1| Acidic 82 kDa protein -like [Oryza sativa (japo... 139 4e-32
ref|NP_851091.1| expressed protein [Arabidopsis thaliana] gi|306... 122 4e-27
gb|AAO42375.1| unknown protein [Arabidopsis thaliana] gi|2775441... 118 8e-26
gb|AAC64888.1| T22H22.18 [Arabidopsis thaliana] gi|25405768|pir|... 107 1e-22
emb|CAA15924.1| SPAC3G9.15c [Schizosaccharomyces pombe] gi|74911... 67 2e-10
ref|XP_395755.2| PREDICTED: similar to estrogen receptor binding... 57 2e-07
ref|XP_215688.2| PREDICTED: similar to Acidic 82 kDa protein mR... 57 3e-07
ref|NP_722501.1| acidic 82 kDa protein [Mus musculus] gi|2027142... 56 4e-07
ref|XP_600582.1| PREDICTED: similar to estrogen receptor binding... 56 5e-07
ref|XP_547275.1| PREDICTED: similar to estrogen receptor binding... 55 8e-07
emb|CAI21812.1| acidic 82 kDa protein mRNA (HSU15552) [Homo sapi... 55 1e-06
gb|AAR02407.1| LPTS-RP2 [Homo sapiens] 55 1e-06
ref|XP_513572.1| PREDICTED: similar to dJ561L24.2 (acidic 82 kDa... 55 1e-06
dbj|BAD08331.1| TdT interacting factor 2 [Homo sapiens] gi|54633... 55 1e-06
ref|XP_422333.1| PREDICTED: similar to estrogen receptor binding... 55 1e-06
gb|AAQ95169.1| estrogen receptor binding protein [Homo sapiens] 55 1e-06
pir||G01522 acidic 82 kDa protein - human gi|558458|gb|AAA50601.... 55 1e-06
dbj|BAD96442.1| estrogen receptor binding protein variant [Homo ... 53 3e-06
ref|XP_319572.2| ENSANGP00000016794 [Anopheles gambiae str. PEST... 52 5e-06
emb|CAG07972.1| unnamed protein product [Tetraodon nigroviridis] 52 5e-06
>ref|XP_467615.1| Acidic 82 kDa protein -like [Oryza sativa (japonica
cultivar-group)] gi|51964338|ref|XP_506954.1| PREDICTED
OSJNBa0072H09.39 gene product [Oryza sativa (japonica
cultivar-group)] gi|46390862|dbj|BAD16366.1| Acidic 82
kDa protein -like [Oryza sativa (japonica
cultivar-group)] gi|46390466|dbj|BAD15927.1| Acidic 82
kDa protein -like [Oryza sativa (japonica
cultivar-group)]
Length = 195
Score = 139 bits (349), Expect = 4e-32
Identities = 80/174 (45%), Positives = 99/174 (55%), Gaps = 39/174 (22%)
Query: 33 RDDGSHSTSQAESSTITLWKHNSELVHALFVPPNEPTKLNKLLREQVKDTTGRIWFDMPA 92
+ D S+S+A+ S LWK SELV LFVPP +P K NKL R+ VKDT+G+ WFDMPA
Sbjct: 25 KKDTGASSSRAQGS---LWKPASELVDGLFVPPRDPRKANKLARKNVKDTSGKGWFDMPA 81
Query: 93 QTINPELQKDETSLQLRAAIDPKRHYKKGNSKSKALPKYFQASS---------------- 136
TI PEL+KD LQLR +DPKRH+K+ KSKALPKYFQ +
Sbjct: 82 PTITPELKKDLEILQLRHVMDPKRHFKRA-GKSKALPKYFQVGTVIEPASEFFSSRLTKR 140
Query: 137 -------------------GARKVREIEEQNQPAGNEKWKVKGGNSRKRAKERR 171
RKVREI+E P G++KW+ KG + KRAK+RR
Sbjct: 141 ERKTTLVDELLSDQHLKNYRMRKVREIQESRTPGGSQKWRNKGKKTLKRAKDRR 194
>ref|NP_851091.1| expressed protein [Arabidopsis thaliana]
gi|30692248|ref|NP_680266.2| expressed protein
[Arabidopsis thaliana]
Length = 196
Score = 122 bits (306), Expect = 4e-27
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 36/171 (21%)
Query: 37 SHSTSQAES-STITLWKHNSELVHALFVPPNEPTKLNKLLREQVKDTTGRIWFDMPAQTI 95
S S+ + ES + +LW SELV L +PPN+P K+NK++R+Q+KDTTG WFDMPA T+
Sbjct: 27 STSSKRVESHESSSLWMSKSELVDGLCLPPNDPKKINKMIRKQIKDTTGSNWFDMPAPTM 86
Query: 96 NPELQKDETSLQLRAAIDPKRHYKKGNSKSKALPKYFQASS------------------- 136
PEL++D L+LR +DP HYKK S+SK KYFQ +
Sbjct: 87 TPELKRDLQLLKLRTVMDPAVHYKKSVSRSKLAEKYFQIGTVIEPAEEFYGRLTKKNRKA 146
Query: 137 ---------------GARKVREIEEQNQPAGNEKWKVKGGNSRKRAKERRN 172
RKV+EIEE+++ N+KWK K GN K+RRN
Sbjct: 147 TLADELVSDPKVSQYRKRKVKEIEEKSRAVTNKKWK-KKGNQTTNKKQRRN 196
>gb|AAO42375.1| unknown protein [Arabidopsis thaliana] gi|27754411|gb|AAO22654.1|
unknown protein [Arabidopsis thaliana]
gi|15221891|ref|NP_175875.1| expressed protein
[Arabidopsis thaliana]
Length = 189
Score = 118 bits (295), Expect = 8e-26
Identities = 72/171 (42%), Positives = 90/171 (52%), Gaps = 42/171 (24%)
Query: 36 GSHSTSQAESSTITLWKHNSELVHALFVPPNEPTKLNKLLREQVKDTTGRIWFDMPAQTI 95
GS + AESS SELV L +PPN+P K+NK++R+Q+KDTTG WFDMPA T+
Sbjct: 27 GSTRSKTAESS-------KSELVDGLCLPPNDPRKINKMIRKQLKDTTGSNWFDMPAPTM 79
Query: 96 NPELQKDETSLQLRAAIDPKRHYKKGNSKSKALPKYFQ---------------------- 133
PEL++D L+LR +DP HYKK S+SK KYFQ
Sbjct: 80 TPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYFQIGTVIEPAEEFYGRLTKKNRKA 139
Query: 134 ------------ASSGARKVREIEEQNQPAGNEKWKVKGGNSRKRAKERRN 172
A RKVREIEE+++ N+KW K GN K K RRN
Sbjct: 140 TLADELVSDPKTALYRKRKVREIEEKSRAVTNKKWN-KKGNQSKNTKPRRN 189
>gb|AAC64888.1| T22H22.18 [Arabidopsis thaliana] gi|25405768|pir||G96589 T22H22.18
[imported] - Arabidopsis thaliana
Length = 284
Score = 107 bits (267), Expect = 1e-22
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
Query: 36 GSHSTSQAESSTITLWKHNSELVHALFVPPNEPTKLNKLLREQVKDTTGRIWFDMPAQTI 95
GS + AESS SELV L +PPN+P K+NK++R+Q+KDTTG WFDMPA T+
Sbjct: 27 GSTRSKTAESS-------KSELVDGLCLPPNDPRKINKMIRKQLKDTTGSNWFDMPAPTM 79
Query: 96 NPELQKDETSLQLRAAIDPKRHYKKGNSKSKALPKYFQASSGARKVR 142
PEL++D L+LR +DP HYKK S+SK KYFQAS R R
Sbjct: 80 TPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYFQASFRTRSKR 126
>emb|CAA15924.1| SPAC3G9.15c [Schizosaccharomyces pombe] gi|7491110|pir||T11651
hypothetical protein SPAC3G9.15c - fission yeast
(Schizosaccharomyces pombe)
Length = 230
Score = 67.4 bits (163), Expect = 2e-10
Identities = 35/98 (35%), Positives = 54/98 (54%), Gaps = 4/98 (4%)
Query: 76 REQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKKGNSKSKALPKYFQAS 135
++ +KDT G WFDMPA + +++D L++R A+DPKRHY++ N+KS +PKYFQ
Sbjct: 104 KKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHYRRENTKS--MPKYFQVG 161
Query: 136 SGARKVREIEEQNQPAGNEKWKVKGGNSRKRAKERRNY 173
S ++ P K + + ERR+Y
Sbjct: 162 SIVEGPQDFYSSRIPTRERKETIV--DELLHDSERRSY 197
>ref|XP_395755.2| PREDICTED: similar to estrogen receptor binding protein [Apis
mellifera]
Length = 256
Score = 57.0 bits (136), Expect = 2e-07
Identities = 39/116 (33%), Positives = 58/116 (49%), Gaps = 5/116 (4%)
Query: 21 WSQRRHFCAVLCRDDGSHSTSQAESSTITLWKH--NSELVHALFVPPNEPTKLNKLLREQ 78
WS R ++ D H T + + L K S VP TKL K R +
Sbjct: 74 WSNERKKNNLISSQDVIHLTQELTAVDKILKKSIIQSGFEKLEAVPCELSTKLLKAKRRK 133
Query: 79 VKDTT-GRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKKGNSKSKALPKYFQ 133
+ T G+ WF+M A + PE++ D +++R+ +DPKR YKK + K+ LP+YFQ
Sbjct: 134 ERSKTKGKDWFNMGAPELTPEVKHDLQVIRMRSVLDPKRFYKKNDLKT--LPRYFQ 187
>ref|XP_215688.2| PREDICTED: similar to Acidic 82 kDa protein mRNA [Rattus
norvegicus]
Length = 761
Score = 56.6 bits (135), Expect = 3e-07
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 624 VPPYSESKHQLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLKALKMRASMDPKRFYKK 683
Query: 121 GNSKSKALPKYFQASS 136
+ PKYFQ +
Sbjct: 684 ND--RDGFPKYFQVGT 697
>ref|NP_722501.1| acidic 82 kDa protein [Mus musculus] gi|20271421|gb|AAH28305.1|
Acidic 82 kDa protein mRNA [Mus musculus]
Length = 758
Score = 56.2 bits (134), Expect = 4e-07
Identities = 31/76 (40%), Positives = 43/76 (55%), Gaps = 4/76 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA +DPKR YKK
Sbjct: 621 VPPYSESKHRLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLRALKMRAGMDPKRFYKK 680
Query: 121 GNSKSKALPKYFQASS 136
+ PKYFQ +
Sbjct: 681 ND--RDGFPKYFQVGT 694
>ref|XP_600582.1| PREDICTED: similar to estrogen receptor binding protein, partial
[Bos taurus]
Length = 154
Score = 55.8 bits (133), Expect = 5e-07
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 17 VPPYSESKYKLQKKRRQERQKTAGDGWFGMKAPELTDELKNDLKALKMRASMDPKRFYKK 76
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 77 ND--RDGFPKYFQ 87
>ref|XP_547275.1| PREDICTED: similar to estrogen receptor binding protein [Canis
familiaris]
Length = 676
Score = 55.1 bits (131), Expect = 8e-07
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 539 VPPYSESKHQLQKKRRKERQKTAGDGWFGMKAPELTNELKNDLKALKMRASMDPKRFYKK 598
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 599 ND--RDGFPKYFQ 609
>emb|CAI21812.1| acidic 82 kDa protein mRNA (HSU15552) [Homo sapiens]
Length = 810
Score = 54.7 bits (130), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 679 ND--RDGFPKYFQ 689
>gb|AAR02407.1| LPTS-RP2 [Homo sapiens]
Length = 756
Score = 54.7 bits (130), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 679 ND--RDGFPKYFQ 689
>ref|XP_513572.1| PREDICTED: similar to dJ561L24.2 (acidic 82 kDa protein) [Pan
troglodytes]
Length = 934
Score = 54.7 bits (130), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 797 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 856
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 857 ND--RDGFPKYFQ 867
>dbj|BAD08331.1| TdT interacting factor 2 [Homo sapiens]
gi|54633315|ref|NP_055412.2| estrogen receptor binding
protein [Homo sapiens]
Length = 756
Score = 54.7 bits (130), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 679 ND--RDGFPKYFQ 689
>ref|XP_422333.1| PREDICTED: similar to estrogen receptor binding protein [Gallus
gallus]
Length = 951
Score = 54.7 bits (130), Expect = 1e-06
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 63 VPPNEPT--KLNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP + +L K R + + TTG WF M A I EL+ D L++RA++DPK YKK
Sbjct: 838 VPPFRESLQQLKKQRRAEREKTTGDGWFGMKAPEITSELKNDLKVLKMRASLDPKHFYKK 897
Query: 121 GNSKSKALPKYFQASS 136
+ LPKYFQ +
Sbjct: 898 ND--RDGLPKYFQVGT 911
>gb|AAQ95169.1| estrogen receptor binding protein [Homo sapiens]
Length = 756
Score = 54.7 bits (130), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 679 ND--RDGFPKYFQ 689
>pir||G01522 acidic 82 kDa protein - human gi|558458|gb|AAA50601.1| acidic 82
kDa protein
Length = 736
Score = 54.7 bits (130), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF M A + EL+ D +L++RA++DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 679 ND--RDGFPKYFQ 689
>dbj|BAD96442.1| estrogen receptor binding protein variant [Homo sapiens]
Length = 756
Score = 53.1 bits (126), Expect = 3e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 63 VPPNEPTK--LNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP +K L K R++ + T G WF + A + EL+ D +L++RA++DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGIKAPEMTNELKNDLKALKMRASMDPKRFYKK 678
Query: 121 GNSKSKALPKYFQ 133
+ PKYFQ
Sbjct: 679 ND--RDGFPKYFQ 689
>ref|XP_319572.2| ENSANGP00000016794 [Anopheles gambiae str. PEST]
gi|55235119|gb|EAA15082.2| ENSANGP00000016794 [Anopheles
gambiae str. PEST]
Length = 288
Score = 52.4 bits (124), Expect = 5e-06
Identities = 24/65 (36%), Positives = 43/65 (65%), Gaps = 2/65 (3%)
Query: 69 TKLNKLLREQVKDTTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKKGNSKSKAL 128
T + KL R + K T G+ W+ + A I+PELQ + T +++R+ +DPK+ +K+ + + +
Sbjct: 154 TAIRKLNRLERKKTKGKGWYGLAAPEISPELQNELTLMKMRSVLDPKQSFKRLDKRKQ-- 211
Query: 129 PKYFQ 133
PKYF+
Sbjct: 212 PKYFE 216
>emb|CAG07972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1018
Score = 52.4 bits (124), Expect = 5e-06
Identities = 32/95 (33%), Positives = 48/95 (49%), Gaps = 4/95 (4%)
Query: 63 VPPNEPTKLNKLLREQVKD--TTGRIWFDMPAQTINPELQKDETSLQLRAAIDPKRHYKK 120
VPP + +K L+ +V+ TTG WF+M A ++ EL+ D L++R ++D KR YKK
Sbjct: 919 VPPYQESKQALKLKRRVEKEKTTGDSWFNMKAPELSQELKGDLQVLKMRGSLDSKRFYKK 978
Query: 121 GNSKSKALPKYFQASSGARKVREIEEQNQPAGNEK 155
+ PKYFQ + + P N K
Sbjct: 979 ND--RDGFPKYFQVGTVVDNPVDFYHSRIPKKNRK 1011
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 300,643,404
Number of Sequences: 2540612
Number of extensions: 11543952
Number of successful extensions: 25713
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 25658
Number of HSP's gapped (non-prelim): 89
length of query: 173
length of database: 863,360,394
effective HSP length: 119
effective length of query: 54
effective length of database: 561,027,566
effective search space: 30295488564
effective search space used: 30295488564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0042.2