BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0042.10
(217 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAG27070.1| small GTPase [Medicago sativa] 367 e-100
emb|CAA98182.1| RAB11F [Lotus corniculatus var. japonicus] 340 2e-92
gb|AAM61371.1| putative ras-related GTP-binding protein [Arabido... 274 1e-72
ref|NP_173258.1| Ras-related GTP-binding family protein [Arabido... 268 6e-71
gb|AAF97836.1| Contains similarity to ras-related GTP binding pr... 268 6e-71
emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumi... 259 4e-68
sp|Q40521|R11B_TOBAC Ras-related protein Rab11B gi|7438406|pir||... 243 2e-63
dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa] g... 241 1e-62
gb|AAP21214.1| At1g16920 [Arabidopsis thaliana] gi|15219955|ref|... 241 1e-62
gb|AAK15703.1| GTP-binding protein [Oryza sativa] gi|53792703|db... 241 1e-62
gb|AAM63927.1| guanine nucleotide regulatory protein, putative [... 240 2e-62
ref|XP_450547.1| putative GTP-binding protein [Oryza sativa (jap... 236 3e-61
gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arab... 236 3e-61
gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa (japonica ... 235 6e-61
dbj|BAA02111.1| GTP-binding protein [Pisum sativum] gi|7438431|p... 235 6e-61
gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japon... 234 1e-60
dbj|BAA02112.1| GTP-binding protein [Pisum sativum] gi|7438432|p... 234 1e-60
gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum] 234 2e-60
gb|AAN03472.1| GTP-binding protein [Glycine max] 233 2e-60
emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia fab... 233 3e-60
>emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 367 bits (943), Expect = e-100
Identities = 182/211 (86%), Positives = 197/211 (93%)
Query: 6 FDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQ 65
F+EECDYLFK VLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAY NIKVRDKLIKAQ
Sbjct: 8 FEEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 67
Query: 66 IWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVG 125
IWDTAGQERFRAITSSYYRGALGA++VYDITRRSSYE+V WL+ELREFGGE+MVVILVG
Sbjct: 68 IWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG 127
Query: 126 NKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEA 185
NK DLG+SREVE+EE KGFAE EGLCFMETSALKNLNVE+VFL+MIT I DIT QRSL+A
Sbjct: 128 NKCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 187
Query: 186 KVDEKPINVFSGKEIHLVDEVTATKQATCCS 216
K+DE PIN+ +GKEIH+ DEVTATKQA CCS
Sbjct: 188 KMDETPINLSNGKEIHIADEVTATKQAPCCS 218
>emb|CAA98182.1| RAB11F [Lotus corniculatus var. japonicus]
Length = 218
Score = 340 bits (871), Expect = 2e-92
Identities = 175/217 (80%), Positives = 189/217 (86%), Gaps = 1/217 (0%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M ADAFDE+CDYLFK VLIGDSGVGKSNL+SRFAKDEFRLDSKPTIGVEFAY NIKVRDK
Sbjct: 1 MAADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
LIKAQIWDTAGQERFRAITSSYYRGALG M+VYDITRR ++ NV WL ELREFG EDMV
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
V+LV NKSDL QSREVEKEEG+ FAE EGLCFMETSAL+NLNVEE FLEMITKI DI Q
Sbjct: 121 VVLVANKSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQ 180
Query: 181 RSLEAKVD-EKPINVFSGKEIHLVDEVTATKQATCCS 216
+SLE K++ ++V GKEI + DEVTATKQA CCS
Sbjct: 181 KSLETKMNGPTTLSVPIGKEIQVADEVTATKQANCCS 217
>gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|15219515|ref|NP_177505.1| Ras-related GTP-binding
family protein [Arabidopsis thaliana]
gi|12324223|gb|AAG52089.1| putative ras-related
GTP-binding protein; 14977-15931 [Arabidopsis thaliana]
gi|25294119|pir||D96763 hypothetical protein F25P22.5
[imported] - Arabidopsis thaliana
Length = 233
Score = 274 bits (700), Expect = 1e-72
Identities = 143/231 (61%), Positives = 175/231 (74%), Gaps = 16/231 (6%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M D ++EECDYLFK VLIGDS VGKSNLLSRF+KDEFR DSKPTIGVEFAY N+ V DK
Sbjct: 1 MAEDTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
+IKAQIWDTAGQERFRAITSSYYRGALGA+++YDITRR++++N++ WL ELR+F + V
Sbjct: 61 IIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
V+LVGNKSDL QSREVE++EGK AE+EGL F+ETSAL+N+NVEE FL MI +I ++ Q
Sbjct: 121 VVLVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQ 180
Query: 181 R-SLEAKVDEKPINVFS----------GKEIHLVDEVTATK-----QATCC 215
R + E K + + GKEI + EVTAT+ + CC
Sbjct: 181 RIASENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231
>ref|NP_173258.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
Length = 354
Score = 268 bits (686), Expect = 6e-71
Identities = 130/181 (71%), Positives = 155/181 (84%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M +++DEECDYLFK VLIGDS VGKSNLLSRF++DEFRLDSKPTIGV+FAY N++V DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
IKAQIWDTAGQERFRAITSSYYRGALGA+++YDITRR +++N+ WL ELR F + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
V+LVGNKSDLGQSREVE+EEGK AE+EGL F+ETSAL+N NVEE FL MI +I ++ Q
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 R 181
+
Sbjct: 181 K 181
>gb|AAF97836.1| Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family. [Arabidopsis thaliana]
Length = 326
Score = 268 bits (686), Expect = 6e-71
Identities = 130/181 (71%), Positives = 155/181 (84%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M +++DEECDYLFK VLIGDS VGKSNLLSRF++DEFRLDSKPTIGV+FAY N++V DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
IKAQIWDTAGQERFRAITSSYYRGALGA+++YDITRR +++N+ WL ELR F + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
V+LVGNKSDLGQSREVE+EEGK AE+EGL F+ETSAL+N NVEE FL MI +I ++ Q
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 R 181
+
Sbjct: 181 K 181
>emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 259 bits (662), Expect = 4e-68
Identities = 135/202 (66%), Positives = 161/202 (78%), Gaps = 2/202 (0%)
Query: 17 VLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQIWDTAGQERFR 76
VL GDSGVGKSNLLSRF+K+EFR DS+PTIGVEFAY NIKV DKL+K QIWDTAGQERFR
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 77 AITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGNKSDLGQSREV 136
AITSSYYRGALGA++VYDITR ++++N++ WL ELREFG +MV+ILVGNK DL QSREV
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 137 EKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEA-KVDEKPINVF 195
++EE + AE E L FMETSA NLNVEE FLEM+ +I I Q++L+ K EK +
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 196 SGKEIHLVDEVTATK-QATCCS 216
+GKEI + EVT TK + CCS
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCS 202
>sp|Q40521|R11B_TOBAC Ras-related protein Rab11B gi|7438406|pir||T03620 GTP-binding
protein Rab11b - common tobacco gi|623578|gb|AAA74113.1|
putative
Length = 217
Score = 243 bits (621), Expect = 2e-63
Identities = 122/212 (57%), Positives = 165/212 (77%), Gaps = 3/212 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF+++EF L+SK TIGVEFA +I+V DK++KAQI
Sbjct: 8 EDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 67
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA+VVYDITR ++ENV WL ELR+ +++V++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGN 127
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
K+DL R V E+ K FAE E FMETSAL++LNVE F E++T+I + C+++LE
Sbjct: 128 KADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALE-- 185
Query: 187 VDEKPINVFSGKEIHL-VDEVTATKQATCCST 217
V + P + G+ I++ D+V+A K+ CCS+
Sbjct: 186 VGDDPAALPKGQTINVGKDDVSAVKKVGCCSS 217
>dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
gi|730512|sp|P40393|RIC2_ORYSA Ras-related protein RIC2
gi|481506|pir||S38741 GTP-binding protein ric2 - rice
Length = 217
Score = 241 bits (615), Expect = 1e-62
Identities = 122/210 (58%), Positives = 162/210 (77%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA +++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR S++ENV WL ELR+ ++VV+LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V+ +EGK FAE E L FMETSAL++ NVE F E++T+I I +RS+EA
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAG 187
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D+ G++I++ D+V+A K+ CCS
Sbjct: 188 -DDAGSGPGKGEKINIKDDVSAVKKGGCCS 216
>gb|AAP21214.1| At1g16920 [Arabidopsis thaliana] gi|15219955|ref|NP_173136.1|
Ras-related GTP-binding protein, putative [Arabidopsis
thaliana] gi|2118459|pir||S59942 GTP-binding protein
Rab11 - Arabidopsis thaliana gi|9802771|gb|AAF99840.1|
GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|3024526|sp|Q39222|RB1B_ARATH Ras-related protein
Rab11 gi|451860|gb|AAA32872.1| small GTP-binding protein
Length = 216
Score = 241 bits (615), Expect = 1e-62
Identities = 122/210 (58%), Positives = 161/210 (76%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA +KV K++KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TRR+++ENV WL EL+ ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V E+GK +AE E LCFMETSAL+ NVE+ F E++T+I IT ++ +EA
Sbjct: 127 KSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAG 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D +V G++I + ++V+A K+ CCS
Sbjct: 187 EDGN-ASVPKGEKIEVKNDVSALKKLGCCS 215
>gb|AAK15703.1| GTP-binding protein [Oryza sativa] gi|53792703|dbj|BAD53715.1|
GTP-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 217
Score = 241 bits (615), Expect = 1e-62
Identities = 122/210 (58%), Positives = 162/210 (77%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA +++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR S++ENV WL ELR+ ++VV+LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V+ +EGK FAE E L FMETSAL++ NVE F E++T+I I +RS+EA
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAG 187
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D+ G++I++ D+V+A K+ CCS
Sbjct: 188 -DDAGSGPGKGEKINIKDDVSAVKKGGCCS 216
>gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 240 bits (613), Expect = 2e-62
Identities = 122/210 (58%), Positives = 160/210 (76%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA KV K++KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TRR+++ENV WL EL+ ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V E+GK +AE E LCFMETSAL+ NVE+ F E++T+I IT ++ +EA
Sbjct: 127 KSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAG 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D +V G++I + ++V+A K+ CCS
Sbjct: 187 EDGN-ASVPKGEKIEVKNDVSALKKLGCCS 215
>ref|XP_450547.1| putative GTP-binding protein [Oryza sativa (japonica
cultivar-group)] gi|48716902|dbj|BAD23597.1| putative
GTP-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 216
Score = 236 bits (602), Expect = 3e-61
Identities = 120/218 (55%), Positives = 165/218 (75%), Gaps = 4/218 (1%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
MA +++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA +I+V DK+
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
+KAQIWDTAGQER+RAITS+YYRGA+GA+VVYD+TR ++ENV WL ELR+ ++V+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
+LVGNK+DL R V E+ KGFAE E FMETSAL+++NVE F E++T+I + ++
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 182 SLEAKVDEKPINVFSGKEIHL--VDEVTATKQATCCST 217
+L+ + + P G+ I++ D+V+A K++ CCS+
Sbjct: 181 ALD--IGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 216
>gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|13877913|gb|AAK44034.1| putative Rab-type small
GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding
protein-like [Arabidopsis thaliana]
gi|15242483|ref|NP_199387.1| Ras-related GTP-binding
protein, putative [Arabidopsis thaliana]
Length = 216
Score = 236 bits (602), Expect = 3e-61
Identities = 122/210 (58%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D+E DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA ++ V DK+IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR S++ENV WL ELR ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V+ E+ K FAE E L FMETSAL+ NVE F E++T+I I ++++EA
Sbjct: 127 KSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAA 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
+ + G +I + +V+A K+ CCS
Sbjct: 187 SESANV-PSKGDKIDIGKDVSAVKKGGCCS 215
>gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa (japonica cultivar-group)]
gi|34909538|ref|NP_916116.1| putative GTP-binding
protein [Oryza sativa (japonica cultivar-group)]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1
[Oryza sativa (japonica cultivar-group)]
Length = 221
Score = 235 bits (600), Expect = 6e-61
Identities = 120/210 (57%), Positives = 159/210 (75%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFKTVLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA +I+V K++KAQI
Sbjct: 12 EDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQI 71
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TRR++++NV WL ELR+ +VV+LVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGN 131
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V E+GK +AE E L FMETSAL NVE F E++T+I ++++EA
Sbjct: 132 KSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTVEAS 191
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D + G++I++ D+V+A K+ CCS
Sbjct: 192 DDGSNAPI-KGEKINVKDDVSALKRIGCCS 220
>dbj|BAA02111.1| GTP-binding protein [Pisum sativum] gi|7438431|pir||T06446
GTP-binding protein - garden pea
Length = 215
Score = 235 bits (600), Expect = 6e-61
Identities = 120/214 (56%), Positives = 162/214 (75%), Gaps = 3/214 (1%)
Query: 5 AFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKA 64
A DEE DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA ++++ DKL+KA
Sbjct: 3 AADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKA 62
Query: 65 QIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILV 124
QIWDTAGQER+RAITS+YYRGA+GA++VYD TR ++ENV WL ELR+ +V++LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLV 122
Query: 125 GNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLE 184
GNK+DL V EE FAE E + FMETSAL+++NV+ F+E++T+I ++ +R+LE
Sbjct: 123 GNKTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRALE 182
Query: 185 AKVDEKPINVFSGKEIHL-VDEVTATKQATCCST 217
+ +V G+ I++ D+V+ K++TCCST
Sbjct: 183 K--ENGSASVPKGETINIGRDDVSEVKKSTCCST 214
>gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 217
Score = 234 bits (597), Expect = 1e-60
Identities = 118/218 (54%), Positives = 163/218 (74%), Gaps = 4/218 (1%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
MA D++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA +I V DK+
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
+KAQIWDTAGQER+RAITS+YYRGA+GA+VVYD+TR ++ENV W+ EL++ ++V+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
+LVGNK+DL R V E+ K FAE E FMETSAL+++NVE F E++T+I + ++
Sbjct: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
Query: 182 SLEAKVDEKPINVFSGKEIHL--VDEVTATKQATCCST 217
+L+ + + P G+ I++ D+V+A K++ CCS+
Sbjct: 181 ALD--IGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 216
>dbj|BAA02112.1| GTP-binding protein [Pisum sativum] gi|7438432|pir||T06447
GTP-binding protein - garden pea gi|738936|prf||2001457D
GTP-binding protein
Length = 217
Score = 234 bits (597), Expect = 1e-60
Identities = 120/212 (56%), Positives = 160/212 (74%), Gaps = 4/212 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA +I+V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR ++ENV WL ELR+ ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
K+DL R V E+ FAE E FMETSAL++LNVE F E++T+I + +++LE
Sbjct: 127 KADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALE-- 184
Query: 187 VDEKPINVFSGKEIHL--VDEVTATKQATCCS 216
+ + P + G+ I++ D+V+A K+ CCS
Sbjct: 185 IGDDPAALPKGQTINVGSRDDVSAVKKGGCCS 216
>gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 234 bits (596), Expect = 2e-60
Identities = 119/218 (54%), Positives = 165/218 (75%), Gaps = 4/218 (1%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
MA D++ DYLFK VLIGDSGVGKSNLL+RF ++EF L+SK TIGVEFA +I+V DK+
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
+KAQIWDTAGQER+RAITS+YYRGA+GA+VVYD+TR ++ENV WL EL++ ++V+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
+LVGNK+DL R V E+ K FAE E FMETSAL+++NVE+ F E++T+I + ++
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKK 180
Query: 182 SLEAKVDEKPINVFSGKEIHL--VDEVTATKQATCCST 217
+L+ + + P G+ I++ D+V+A K+A CCS+
Sbjct: 181 ALD--IGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 233 bits (595), Expect = 2e-60
Identities = 119/211 (56%), Positives = 156/211 (73%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR++++ENV WL ELR ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V E+GK +AE E L FMETSAL+ NVE F E++T+I I ++++E
Sbjct: 127 KSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVA 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCST 217
+ G++I L ++V+A K+ CCS+
Sbjct: 187 ENGTTSVPAKGEKIDLKNDVSALKRVGCCSS 217
>emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum
sativum] gi|541979|pir||S41431 GTP-binding protein,
ras-like - fava bean gi|1098295|prf||2115367C small
GTP-binding protein gi|738937|prf||2001457E GTP-binding
protein
Length = 217
Score = 233 bits (594), Expect = 3e-60
Identities = 118/211 (55%), Positives = 155/211 (72%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR +++ENV WL ELR ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
K+DL V E+GK +AE E L FMETSAL+ NVE F E++T+I I ++++E
Sbjct: 127 KADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGA 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCST 217
+ G++I L ++V+A K+ CCS+
Sbjct: 187 ENGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 333,231,574
Number of Sequences: 2540612
Number of extensions: 12912056
Number of successful extensions: 51221
Number of sequences better than 10.0: 4875
Number of HSP's better than 10.0 without gapping: 3605
Number of HSP's successfully gapped in prelim test: 1270
Number of HSP's that attempted gapping in prelim test: 43518
Number of HSP's gapped (non-prelim): 5063
length of query: 217
length of database: 863,360,394
effective HSP length: 123
effective length of query: 94
effective length of database: 550,865,118
effective search space: 51781321092
effective search space used: 51781321092
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0042.10