BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0041.13
(130 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD93720.1| putative secretory carrier-associated membrane p... 191 3e-48
gb|AAM64529.1| putative secretory carrier-associated membrane pr... 173 7e-43
gb|AAM63793.1| secretory carrier membrane protein [Arabidopsis t... 167 7e-41
ref|XP_463469.1| secretory carrier membrane protein [Oryza sativ... 162 2e-39
pir||D96638 hypothetical protein F11P17.4 [imported] - Arabidops... 161 4e-39
ref|NP_911223.1| putative secretory carrier membrane protein [Or... 160 6e-39
gb|AAD49997.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 154 5e-37
ref|NP_172584.1| secretory carrier membrane protein (SCAMP) fami... 154 5e-37
gb|AAU90239.1| putative secretory carrier membrane protein [Oryz... 149 2e-35
ref|XP_463053.1| putative secretory carrier membrane protein [Or... 145 2e-34
gb|AAC82326.1| similarity to SCAMP37 [Pisum sativum] 143 8e-34
ref|XP_463054.1| putative secretory carrier membrane protein [Or... 134 5e-31
ref|XP_467295.1| putative secretory carrier membrane protein [Or... 123 1e-27
gb|AAM64938.1| secretory carrier membrane protein, putative [Ara... 122 1e-27
ref|XP_462676.1| OSJNBa0093F12.6 [Oryza sativa (japonica cultiva... 92 4e-18
pir||T00903 hypothetical protein F21B7.17 - Arabidopsis thaliana 85 3e-16
gb|EAK84323.1| hypothetical protein UM03218.1 [Ustilago maydis 5... 53 1e-06
ref|NP_036016.1| secretory carrier membrane protein 3 [Mus muscu... 49 2e-05
gb|AAH46051.1| Secretory carrier membrane protein 2, isoform 1 [... 49 2e-05
gb|AAH66575.1| Secretory carrier membrane protein 2, isoform 2 [... 49 2e-05
>dbj|BAD93720.1| putative secretory carrier-associated membrane protein [Arabidopsis
thaliana] gi|4454464|gb|AAD20911.1| putative secretory
carrier-associated membrane protein [Arabidopsis
thaliana] gi|46931314|gb|AAT06461.1| At2g20840
[Arabidopsis thaliana] gi|25411996|pir||A84594
hypothetical protein At2g20840 [imported] - Arabidopsis
thaliana gi|15226410|ref|NP_179680.1| secretory carrier
membrane protein (SCAMP) family protein [Arabidopsis
thaliana]
Length = 282
Score = 191 bits (486), Expect = 3e-48
Identities = 91/122 (74%), Positives = 107/122 (87%)
Query: 6 EMEPARNSGSVPLATSKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAELKRRE 65
E+ P N SVP ATSKL PLPPEPYDRGAT+DIPLD+ KD+KAKEKEL+ +EAELKRRE
Sbjct: 13 EINPFANPTSVPAATSKLSPLPPEPYDRGATMDIPLDSGKDLKAKEKELREKEAELKRRE 72
Query: 66 QELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLF 125
QE+KRKEDAIA+AGIVIEEKNWPPFFP+IHH+IS EIP+HLQRIQYVAF + LG++ L
Sbjct: 73 QEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLL 132
Query: 126 FS 127
++
Sbjct: 133 WN 134
>gb|AAM64529.1| putative secretory carrier-associated membrane protein [Arabidopsis
thaliana] gi|18379111|ref|NP_563686.1| secretory carrier
membrane protein (SCAMP) family protein [Arabidopsis
thaliana] gi|9280663|gb|AAF86532.1| F21B7.17
[Arabidopsis thaliana]
Length = 283
Score = 173 bits (439), Expect = 7e-43
Identities = 84/123 (68%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
Query: 6 EMEPARNSGSVPLAT-SKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAELKRR 64
E+ P N SVP A+ S LKPLPPEPYDRGAT+DIPLD+ D++AKE ELQA+E ELKR+
Sbjct: 13 EINPFANHTSVPPASNSYLKPLPPEPYDRGATVDIPLDSGNDLRAKEMELQAKENELKRK 72
Query: 65 EQELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFL 124
EQELKR+EDAIAR G+VIEEKNWP FFP+IHH+I EIP+HLQ+IQYVAF T LG++ L
Sbjct: 73 EQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCL 132
Query: 125 FFS 127
++
Sbjct: 133 LWN 135
>gb|AAM63793.1| secretory carrier membrane protein [Arabidopsis thaliana]
gi|19310673|gb|AAL85067.1| putative secretory carrier
membrane protein [Arabidopsis thaliana]
gi|15027863|gb|AAK76462.1| putative secretory carrier
membrane protein [Arabidopsis thaliana]
gi|15219893|ref|NP_176320.1| secretory carrier membrane
protein (SCAMP) family protein (SC3) [Arabidopsis
thaliana] gi|7109228|gb|AAF36686.1| secretory carrier
membrane protein [Arabidopsis thaliana]
Length = 289
Score = 167 bits (422), Expect = 7e-41
Identities = 84/127 (66%), Positives = 104/127 (81%), Gaps = 5/127 (3%)
Query: 6 EMEPARNSGSVPLAT-SKLKPLPPEP--YDRGATIDIPLDT--TKDIKAKEKELQAREAE 60
E+ P N+ VP A+ S+L PLPPEP +D G T+DIPLD T+D+K KEKELQA+EAE
Sbjct: 15 EVNPFANARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAE 74
Query: 61 LKRREQELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGM 120
LKRREQ+LKRKEDA ARAGIVIE KNWPPFFP+IHH+I+ EIP+HLQR+QYV F T+LG+
Sbjct: 75 LKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGL 134
Query: 121 LKFLFFS 127
+ LF++
Sbjct: 135 VLCLFWN 141
>ref|XP_463469.1| secretory carrier membrane protein [Oryza sativa (japonica
cultivar-group)] gi|7109232|gb|AAF36688.1| secretory
carrier membrane protein [Oryza sativa]
gi|15289879|dbj|BAB63575.1| putative secretory carrier
membrane protein [Oryza sativa (japonica
cultivar-group)]
Length = 286
Score = 162 bits (409), Expect = 2e-39
Identities = 80/118 (67%), Positives = 100/118 (83%), Gaps = 4/118 (3%)
Query: 14 GSVPLAT-SKLKPLPPEP---YDRGATIDIPLDTTKDIKAKEKELQAREAELKRREQELK 69
GSVP A+ S++ PLP EP DRGAT+DIPLD+TKD+K KEKELQA+EAEL +RE EL+
Sbjct: 21 GSVPPASNSRMPPLPHEPGFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELR 80
Query: 70 RKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLFFS 127
R+E+A +RAGIVIEEKNWPPFFPIIHH+IS EIP+HLQR+QY+AF + LG+ LF++
Sbjct: 81 RREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWN 138
>pir||D96638 hypothetical protein F11P17.4 [imported] - Arabidopsis thaliana
gi|2443878|gb|AAB71471.1| Unknown protein [Arabidopsis
thaliana]
Length = 234
Score = 161 bits (407), Expect = 4e-39
Identities = 81/121 (66%), Positives = 99/121 (80%), Gaps = 5/121 (4%)
Query: 6 EMEPARNSGSVPLAT-SKLKPLPPEP--YDRGATIDIPLDT--TKDIKAKEKELQAREAE 60
E+ P N+ VP A+ S+L PLPPEP +D G T+DIPLD T+D+K KEKELQA+EAE
Sbjct: 15 EVNPFANARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAE 74
Query: 61 LKRREQELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGM 120
LKRREQ+LKRKEDA ARAGIVIE KNWPPFFP+IHH+I+ EIP+HLQR+QYV F T+L +
Sbjct: 75 LKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLDV 134
Query: 121 L 121
+
Sbjct: 135 I 135
>ref|NP_911223.1| putative secretory carrier membrane protein [Oryza sativa (japonica
cultivar-group)] gi|51963480|ref|XP_506412.1| PREDICTED
OJ1112_E08.118 gene product [Oryza sativa (japonica
cultivar-group)] gi|22830947|dbj|BAC15812.1| putative
secretory carrier membrane protein [Oryza sativa
(japonica cultivar-group)]
Length = 306
Score = 160 bits (405), Expect = 6e-39
Identities = 79/121 (65%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Query: 7 MEPARNSGSVPLATSKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAELKRREQ 66
M RN SV + S+L PLPPEP GAT+DIPLD++KD+K +EKELQAREAEL +RE+
Sbjct: 39 MPNPRNVPSVS-SNSRLSPLPPEPAAFGATVDIPLDSSKDLKNREKELQAREAELNKREK 97
Query: 67 ELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLFF 126
ELKR+E+A ARAGIVIEEKNWPPF P+IHH+I+ EIP HLQR+QYVAF ++LG+ LF+
Sbjct: 98 ELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFW 157
Query: 127 S 127
+
Sbjct: 158 N 158
>gb|AAD49997.1| Hypothetical protein [Arabidopsis thaliana] gi|25402653|pir||G86245
hypothetical protein [imported] - Arabidopsis thaliana
Length = 288
Score = 154 bits (389), Expect = 5e-37
Identities = 78/129 (60%), Positives = 101/129 (77%), Gaps = 7/129 (5%)
Query: 6 EMEPARNSGSVPLAT-SKLKPLPPEP--YDRGATIDIPLDT----TKDIKAKEKELQARE 58
E+ P N GSVP A+ S+L PLPPEP + G T+DIPLD +D+K KEKELQA+E
Sbjct: 15 EVNPFANPGSVPAASNSRLSPLPPEPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKE 74
Query: 59 AELKRREQELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWL 118
A+L+RREQ+LKRK+DA ARAGIVIE KNWP FFP+IHH+I+ EI + LQR+QY+AF T+L
Sbjct: 75 ADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYL 134
Query: 119 GMLKFLFFS 127
G++ LF++
Sbjct: 135 GLVLALFWN 143
>ref|NP_172584.1| secretory carrier membrane protein (SCAMP) family protein
[Arabidopsis thaliana]
Length = 291
Score = 154 bits (389), Expect = 5e-37
Identities = 78/129 (60%), Positives = 101/129 (77%), Gaps = 7/129 (5%)
Query: 6 EMEPARNSGSVPLAT-SKLKPLPPEP--YDRGATIDIPLDT----TKDIKAKEKELQARE 58
E+ P N GSVP A+ S+L PLPPEP + G T+DIPLD +D+K KEKELQA+E
Sbjct: 15 EVNPFANPGSVPAASNSRLSPLPPEPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKE 74
Query: 59 AELKRREQELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWL 118
A+L+RREQ+LKRK+DA ARAGIVIE KNWP FFP+IHH+I+ EI + LQR+QY+AF T+L
Sbjct: 75 ADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYL 134
Query: 119 GMLKFLFFS 127
G++ LF++
Sbjct: 135 GLVLALFWN 143
>gb|AAU90239.1| putative secretory carrier membrane protein [Oryza sativa (japonica
cultivar-group)] gi|53749384|gb|AAU90243.1| putative
secretory carrier membrane protein [Oryza sativa
(japonica cultivar-group)]
Length = 282
Score = 149 bits (375), Expect = 2e-35
Identities = 75/115 (65%), Positives = 94/115 (81%), Gaps = 2/115 (1%)
Query: 14 GSVPLAT-SKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAELKRREQELKRKE 72
GSVP A S+L PL EP D +DIPLD++KD+K KEKELQA EAEL +RE+ELKRKE
Sbjct: 21 GSVPPANNSRLPPLSHEPADF-YNVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKE 79
Query: 73 DAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLFFS 127
+A A+AGIVIE+KNWPPFFP+IHH IS EIP+HLQR+QY+AF ++LG+ LF++
Sbjct: 80 EAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWN 134
>ref|XP_463053.1| putative secretory carrier membrane protein [Oryza sativa (japonica
cultivar-group)] gi|41469326|gb|AAS07182.1| putative
secretory carrier membrane protein [Oryza sativa
(japonica cultivar-group)]
Length = 313
Score = 145 bits (366), Expect = 2e-34
Identities = 72/117 (61%), Positives = 92/117 (78%), Gaps = 5/117 (4%)
Query: 15 SVPLATSKLKPLPPEPYDR----GATIDIPLDTTKDIKAKEKELQAREAELKRREQELKR 70
S P AT L PLPPEP D +DIP+DT+KD+K +EKEL A+EAEL RRE+E+KR
Sbjct: 50 SAPPATH-LSPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKR 108
Query: 71 KEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLFFS 127
+E+A ARAGIV+E+KNWPPFFPIIH++I EIP+HLQR QYVAF + LG++ LF++
Sbjct: 109 REEAAARAGIVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWN 165
>gb|AAC82326.1| similarity to SCAMP37 [Pisum sativum]
Length = 289
Score = 143 bits (361), Expect = 8e-34
Identities = 71/122 (58%), Positives = 93/122 (76%), Gaps = 7/122 (5%)
Query: 6 EMEPARNSGSVPLATSKLKPLPPEP------YDRGATIDIPLDTTKDIKAKEKELQAREA 59
++ P N S AT+ +P P P Y G T+DIPLDT+ D K KE++LQA+EA
Sbjct: 14 QVNPFSNPRSAASATNS-RPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEA 72
Query: 60 ELKRREQELKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLG 119
EL++REQE++RKE+AIARAGIVIEEKNWPPFFPIIHH+I+ EIP+HL+ +QYVAF + LG
Sbjct: 73 ELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLG 132
Query: 120 ML 121
++
Sbjct: 133 LV 134
>ref|XP_463054.1| putative secretory carrier membrane protein [Oryza sativa (japonica
cultivar-group)] gi|41469331|gb|AAS07187.1| putative
secretory carrier membrane protein [Oryza sativa
(japonica cultivar-group)]
Length = 283
Score = 134 bits (337), Expect = 5e-31
Identities = 66/115 (57%), Positives = 89/115 (77%), Gaps = 5/115 (4%)
Query: 17 PLATSKLKPLPPEPY----DRGATIDIPLDTTKDIKAKEKELQAREAELKRREQELKRKE 72
P + + PLP EP D GA++D PLD+ K +K KE+EL A+EAEL +REQELKR+E
Sbjct: 24 PFSHPRPTPLPHEPVAFYNDPGASVD-PLDSKKGLKKKERELLAKEAELNKREQELKRRE 82
Query: 73 DAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLFFS 127
+A+ARAG+ IE KNWPPFFP+IH +IS +IP+HLQR+QYVAF + LG++ LF++
Sbjct: 83 EALARAGVFIEPKNWPPFFPVIHVDISNDIPVHLQRVQYVAFASLLGLVICLFWN 137
>ref|XP_467295.1| putative secretory carrier membrane protein [Oryza sativa (japonica
cultivar-group)] gi|41052954|dbj|BAD07864.1| putative
secretory carrier membrane protein [Oryza sativa
(japonica cultivar-group)]
Length = 281
Score = 123 bits (308), Expect = 1e-27
Identities = 54/94 (57%), Positives = 75/94 (79%)
Query: 34 GATIDIPLDTTKDIKAKEKELQAREAELKRREQELKRKEDAIARAGIVIEEKNWPPFFPI 93
GAT+DIPLD D K K KEL EA+LKRRE +++R+E+A+ AG+ +EEKNWPPFFPI
Sbjct: 58 GATVDIPLDNMSDSKGKGKELLQWEADLKRREADIRRREEALKSAGVPMEEKNWPPFFPI 117
Query: 94 IHHEISKEIPLHLQRIQYVAFITWLGMLKFLFFS 127
IHH+I+ EIP + Q++QY+AF +WLG++ LF++
Sbjct: 118 IHHDIANEIPANAQKLQYLAFASWLGIVLCLFWN 151
>gb|AAM64938.1| secretory carrier membrane protein, putative [Arabidopsis thaliana]
gi|15222550|ref|NP_174485.1| secretory carrier membrane
protein (SCAMP) family protein [Arabidopsis thaliana]
gi|12321473|gb|AAG50798.1| secretory carrier membrane
protein, putative [Arabidopsis thaliana]
gi|25403140|pir||G86444 probable secretory carrier
membrane protein [imported] - Arabidopsis thaliana
Length = 264
Score = 122 bits (307), Expect = 1e-27
Identities = 57/120 (47%), Positives = 86/120 (71%), Gaps = 8/120 (6%)
Query: 10 ARNSGSVPLATSKLKPLPPEPYDRG--ATIDIPLDTTKDIKAKEKELQAREAELKRREQE 67
++ G VP A+ P Y + AT+DIPLD D K+++L EAEL+++E +
Sbjct: 21 SKGGGRVPAASR------PVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAELRKKEMD 74
Query: 68 LKRKEDAIARAGIVIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGMLKFLFFS 127
+KR+E+AIA+ G+ I++KNWPPFFPIIHH+I+KEIP+H Q++QY+AF +WLG++ L F+
Sbjct: 75 IKRREEAIAKFGVQIDDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFN 134
>ref|XP_462676.1| OSJNBa0093F12.6 [Oryza sativa (japonica cultivar-group)]
gi|32492338|emb|CAE05478.1| OSJNBa0006A01.24 [Oryza
sativa (japonica cultivar-group)]
gi|39545854|emb|CAE03932.3| OSJNba0093F12.6 [Oryza
sativa (japonica cultivar-group)]
gi|50928407|ref|XP_473731.1| OSJNBa0093F12.6 [Oryza
sativa (japonica cultivar-group)]
Length = 245
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/101 (43%), Positives = 63/101 (61%), Gaps = 24/101 (23%)
Query: 24 KPLPPEPYDRG---ATIDIPLDTTKDIKAKEKELQAREAELKRREQELKRKEDAIARAGI 80
+P P + G AT+D+PLDT DIK R+E+A+ AG+
Sbjct: 37 RPTEPAGFGAGRGDATVDVPLDTMGDIK---------------------RREEALRNAGV 75
Query: 81 VIEEKNWPPFFPIIHHEISKEIPLHLQRIQYVAFITWLGML 121
+E+KNWPPFFPIIHH+I+ EIP +LQ++QY+AF +WLG++
Sbjct: 76 PMEDKNWPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIV 116
>pir||T00903 hypothetical protein F21B7.17 - Arabidopsis thaliana
Length = 221
Score = 85.1 bits (209), Expect = 3e-16
Identities = 42/65 (64%), Positives = 53/65 (80%), Gaps = 1/65 (1%)
Query: 6 EMEPARNSGSVPLAT-SKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAELKRR 64
E+ P N SVP A+ S LKPLPPEPYDRGAT+DIPLD+ D++AKE ELQA+E ELKR+
Sbjct: 13 EINPFANHTSVPPASNSYLKPLPPEPYDRGATVDIPLDSGNDLRAKEMELQAKENELKRK 72
Query: 65 EQELK 69
EQ+++
Sbjct: 73 EQKIQ 77
>gb|EAK84323.1| hypothetical protein UM03218.1 [Ustilago maydis 521]
gi|49073202|ref|XP_400833.1| hypothetical protein
UM03218.1 [Ustilago maydis 521]
Length = 289
Score = 53.1 bits (126), Expect = 1e-06
Identities = 31/87 (35%), Positives = 49/87 (55%), Gaps = 8/87 (9%)
Query: 33 RGATIDIPLDTTKDIKAKE-KELQAREAELKRREQELKRKEDAIARAGIVIEEKNWPPFF 91
+G+T+D + ++A +EL+ RE EL RRE++L + I + G NWP F+
Sbjct: 47 KGSTVD---EIPSRVEANRMEELRRREEELARRERDLDNRAAHIQKHG----RNNWPFFY 99
Query: 92 PIIHHEISKEIPLHLQRIQYVAFITWL 118
P+I+H+I+ EIP Q I + WL
Sbjct: 100 PLIYHDIAAEIPPDSQAIMENLYKLWL 126
>ref|NP_036016.1| secretory carrier membrane protein 3 [Mus musculus]
gi|2232237|gb|AAB62721.1| secretory carrier membrane
protein [Mus musculus]
Length = 349
Score = 49.3 bits (116), Expect = 2e-05
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 19 ATSKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAELKRREQELKRKEDAIARA 78
++ KL P P Y +T T ++ K++EL EL RRE+EL+ +A
Sbjct: 73 SSRKLSPTEPRNYGSYSTQASAAAATAELLKKQEELNRTAEELDRRERELQH----VALG 128
Query: 79 GIVIEEKNWPPF------FPIIHHEISKEIPLHLQRIQYVAFITWL 118
G + NWPP P +IS EIP Q+ + W+
Sbjct: 129 GAGTRQNNWPPLPSFCPVKPCFFQDISMEIPQEFQKTVSTMYYLWM 174
>gb|AAH46051.1| Secretory carrier membrane protein 2, isoform 1 [Danio rerio]
gi|47087059|ref|NP_998543.1| secretory carrier membrane
protein 2 isoform 1 [Danio rerio]
Length = 326
Score = 49.3 bits (116), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (45%), Gaps = 12/133 (9%)
Query: 1 MDFFSEMEPARNSGSVPLATSKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAE 60
++ FS ++P +++ +P +P + + +++EL+ + AE
Sbjct: 34 IESFSPFPDGNQGSTIPASSAPTQPAVLQPSVEPSPQATAAAAQASLIKQQEELERKAAE 93
Query: 61 LKRREQELKRKEDAIARAGIVIEEKNWPPF---FPI---IHHEISKEIPLHLQRIQYVAF 114
L+RREQEL+ +R ++ NWPP FPI + + S+EIP QR+ + +
Sbjct: 94 LERREQELQ------SRGAPTGKQNNWPPLPKRFPIQPCFYQDFSEEIPQEHQRLCKMIY 147
Query: 115 ITWLGMLKFLFFS 127
W+ LF +
Sbjct: 148 YLWMWECVTLFLN 160
>gb|AAH66575.1| Secretory carrier membrane protein 2, isoform 2 [Danio rerio]
gi|47086941|ref|NP_998470.1| secretory carrier membrane
protein 2 isoform 2 [Danio rerio]
Length = 246
Score = 49.3 bits (116), Expect = 2e-05
Identities = 33/133 (24%), Positives = 62/133 (45%), Gaps = 12/133 (9%)
Query: 1 MDFFSEMEPARNSGSVPLATSKLKPLPPEPYDRGATIDIPLDTTKDIKAKEKELQAREAE 60
++ FS ++P +++ +P +P + + +++EL+ + AE
Sbjct: 34 IESFSPFPDGNQGSTIPASSAPTQPAVLQPSVEPSPQATAAAAQASLIKQQEELERKAAE 93
Query: 61 LKRREQELKRKEDAIARAGIVIEEKNWPPF---FPI---IHHEISKEIPLHLQRIQYVAF 114
L+RREQEL+ +R ++ NWPP FPI + + S+EIP QR+ + +
Sbjct: 94 LERREQELQ------SRGAPTGKQNNWPPLPKRFPIQPCFYQDFSEEIPQEHQRLCKMIY 147
Query: 115 ITWLGMLKFLFFS 127
W+ LF +
Sbjct: 148 YLWMWECVTLFLN 160
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,369,933
Number of Sequences: 2540612
Number of extensions: 9442588
Number of successful extensions: 71964
Number of sequences better than 10.0: 586
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 69692
Number of HSP's gapped (non-prelim): 1970
length of query: 130
length of database: 863,360,394
effective HSP length: 106
effective length of query: 24
effective length of database: 594,055,522
effective search space: 14257332528
effective search space used: 14257332528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0041.13