BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0040.4
(457 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis tha... 138 3e-31
gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa] 127 9e-28
gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa] 125 4e-27
ref|XP_463202.1| putative auxin response factor [Oryza sativa (j... 83 2e-14
emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana] 82 3e-14
gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa (ja... 80 1e-13
dbj|BAB01695.1| unnamed protein product [Arabidopsis thaliana] 77 1e-12
gb|AAP40368.1| unknown protein [Arabidopsis thaliana] gi|2982432... 77 1e-12
dbj|BAB01692.1| unnamed protein product [Arabidopsis thaliana] 77 1e-12
gb|AAQ89626.1| At4g01580 [Arabidopsis thaliana] gi|7268201|emb|C... 76 2e-12
gb|AAD43153.1| Unknown Protein [Arabidopsis thaliana] gi|5197215... 75 4e-12
gb|AAK68808.1| Unknown protein [Arabidopsis thaliana] 73 2e-11
ref|NP_683415.1| transcriptional factor B3 family protein [Arabi... 72 4e-11
ref|XP_463206.1| putative auxin response factor [Oryza sativa (j... 71 6e-11
emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana] gi|4... 67 9e-10
ref|XP_463193.1| putative auxin response factor [Oryza sativa (j... 62 3e-08
dbj|BAD81380.1| unknown protein [Oryza sativa (japonica cultivar... 59 3e-07
dbj|BAB08399.1| unnamed protein product [Arabidopsis thaliana] g... 58 5e-07
ref|NP_913535.1| unnamed protein product [Oryza sativa (japonica... 58 7e-07
emb|CAB89352.1| putative protein [Arabidopsis thaliana] gi|67633... 54 1e-05
>gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis thaliana]
gi|21734794|gb|AAM76972.1| reduced vernalization
response 1 [Arabidopsis thaliana]
gi|30685150|ref|NP_188529.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 341
Score = 138 bits (348), Expect = 3e-31
Identities = 93/323 (28%), Positives = 151/323 (45%), Gaps = 46/323 (14%)
Query: 9 RIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMV 68
R+P+ F ++ +++ L PDG W++ K D +WFQ+GW++F YS+ G+++
Sbjct: 21 RVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLL 80
Query: 69 LFEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNP-------DQIDDDSVEIL------ 115
+F Y+ S F V+IF+ S EI Y S D HN + ++D+ E++
Sbjct: 81 IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 140
Query: 116 -----DKIPPCKK--------------TKLKSPMSCPK-PRKKLRTSTSEDVGE----SP 151
+ P K K + P PK P+K+ R + D E +P
Sbjct: 141 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAP 200
Query: 152 ELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSKFPSFMTVMKPAYV-NG 210
+ + K + A + E+ A+N A+TF+ P F V++P+Y+ G
Sbjct: 201 RDDDPENRSKFYESASARKRTVTAEER----ERAINAAKTFEPTNPFFRVVLRPSYLYRG 256
Query: 211 YSLHIPSFFAKKYLKNETDVLLQVLDGRTWSV----SFNLGKFNAGWKKFTSVNNLKVGD 266
+++PS FA+KYL + + L + W V KF+ GW +FT NNL GD
Sbjct: 257 CIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGD 316
Query: 267 VCLFELNKSVPLSLKVLIFPLAE 289
VC+FEL ++ LKV F + E
Sbjct: 317 VCVFELLRTRDFVLKVTAFRVNE 339
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/115 (33%), Positives = 56/115 (47%), Gaps = 6/115 (5%)
Query: 342 KNAALEEANKFNSNNPFFIVNIAPDK-NRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
+ A+ A F NPFF V + P R +P F K+ + I + +Q +
Sbjct: 227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLAE 283
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K PV+ C K G ++ S+GW EF ++ L GD CVFEL+ D VL V +R
Sbjct: 284 KQWPVR--CLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336
>gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]
Length = 329
Score = 127 bits (318), Expect = 9e-28
Identities = 90/311 (28%), Positives = 146/311 (46%), Gaps = 34/311 (10%)
Query: 9 RIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGD--VWFQNGWKDFAKYYSLDHGH 66
R+P+ F R+ +++ L PDG W++ K D + +WFQ+GW++F YS+ G+
Sbjct: 21 RVPDKFVSRFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQDGWQEFVDRYSIRIGY 80
Query: 67 MVLFEYKDTSHFGVHIFDKSTLEIRYPSHENQDE-EHNP--------DQIDDDSVEILDK 117
+++F Y+ S F V I++ EI Y S D HN + ++D+ E L
Sbjct: 81 LLIFRYEGNSAFSVCIYNLPQSEINYHSTGLMDSASHNNHFKRPRLFEDLEDEDAETLHT 140
Query: 118 IPPCKKTKLKSPM-----------SCPKP--RKKLRTSTSEDVGESPELHNLPK-QVKIE 163
++ P+ PK RKK E+V S + P+ + K
Sbjct: 141 TASAIQSFFTGPVKPEEATPTQTSKVPKKRGRKKKNADHPEEVNSSAPRDDDPESRSKFY 200
Query: 164 DDAGRTTECLEGEDLTSKITEALNRARTFQSKFPSFMTVMKPAYV-NGYSLHIPSFFAKK 222
+ A + E+ A+N A+TF+ P F V++P+Y+ G +++PS FA+K
Sbjct: 201 ESASARKRTVNAEER----ERAVNAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEK 256
Query: 223 YLKNETDVLLQVLDGRTWSV----SFNLGKFNAGWKKFTSVNNLKVGDVCLFELNKSVPL 278
YL + + L + W V KF+ GW +FT NNL GDVC+FEL ++
Sbjct: 257 YLSGISGFIKVQLGEKQWPVRCLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRDF 316
Query: 279 SLKVLIFPLAE 289
LKV + + E
Sbjct: 317 VLKVTAYRVNE 327
Score = 58.9 bits (141), Expect = 3e-07
Identities = 40/115 (34%), Positives = 56/115 (47%), Gaps = 6/115 (5%)
Query: 342 KNAALEEANKFNSNNPFFIVNIAPDK-NRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
+ A+ A F NPFF V + P R +P F K+ + I + +Q +
Sbjct: 215 RERAVNAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLGE 271
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K PV+ C K G ++ S+GW EF ++ L GD CVFEL+ D VL V YR
Sbjct: 272 KQWPVR--CLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRDFVLKVTAYR 324
>gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa]
Length = 329
Score = 125 bits (313), Expect = 4e-27
Identities = 89/310 (28%), Positives = 149/310 (47%), Gaps = 32/310 (10%)
Query: 9 RIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGD--VWFQNGWKDFAKYYSLDHGH 66
R+P+ F ++ +++ L PDG W++ K D + +WFQ+GW++F YS+ G+
Sbjct: 21 RVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQDGWQEFVDRYSIRIGY 80
Query: 67 MVLFEYKDTSHFGVHIFDKSTLEIRYPSHENQDE-EHNP--------DQIDDDSVEILDK 117
+++F Y+ S F V I++ EI Y S D HN + ++D+ E L
Sbjct: 81 LLIFRYEGNSAFSVCIYNLPQSEINYHSTGLMDSASHNNHFKRPRLFEDLEDEDAETLHT 140
Query: 118 IPPCKKTKLKSPMSCPKPRKKLRTSTS---EDVGESPELHNLPKQVKI----EDDAGRTT 170
++ P+ KP + T TS + G + + P++V +DD +
Sbjct: 141 TASAIQSFFTGPV---KPEEATPTQTSKVPKKRGRKKKNADHPEEVNSSAPRDDDPESRS 197
Query: 171 ECLE------GEDLTSKITEALNRARTFQSKFPSFMTVMKPAYV-NGYSLHIPSFFAKKY 223
+ E G + A+N A+TF+ P F V++P+Y+ G +++PS FA+KY
Sbjct: 198 KFYESASARKGTVNAEERERAVNAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKY 257
Query: 224 LKNETDVLLQVLDGRTWSV----SFNLGKFNAGWKKFTSVNNLKVGDVCLFELNKSVPLS 279
L + + L + W V KF+ GW +FT NNL GDVC+FEL ++
Sbjct: 258 LSGISGFIKVQLGEKQWPVRCLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRDFV 317
Query: 280 LKVLIFPLAE 289
LKV + + E
Sbjct: 318 LKVTAYRVNE 327
Score = 58.9 bits (141), Expect = 3e-07
Identities = 40/115 (34%), Positives = 56/115 (47%), Gaps = 6/115 (5%)
Query: 342 KNAALEEANKFNSNNPFFIVNIAPDK-NRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
+ A+ A F NPFF V + P R +P F K+ + I + +Q +
Sbjct: 215 RERAVNAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLGE 271
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K PV+ C K G ++ S+GW EF ++ L GD CVFEL+ D VL V YR
Sbjct: 272 KQWPVR--CLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRDFVLKVTAYR 324
>ref|XP_463202.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201553|gb|AAO34491.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 1029
Score = 83.2 bits (204), Expect = 2e-14
Identities = 79/300 (26%), Positives = 127/300 (42%), Gaps = 43/300 (14%)
Query: 10 IPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMVL 69
IPN F + + G + L+ DG + + +K G + Q+GWK F + L G ++
Sbjct: 748 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 807
Query: 70 FEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSP 129
F Y S V IF S E + ++ H ++ + E L +KSP
Sbjct: 808 FSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGEKWE----EPLHISSNSHDLPVKSP 863
Query: 130 MSCPKPRKKLRTSTSE--------------DVGESPELH-NLPKQVKIEDDAGRTTECLE 174
+ K K+ +S E D+ P L+ LPK ++ D ++
Sbjct: 864 QNVSKSEKQWDSSEQENDTANIEEVALQGDDLQGHPVLNCILPKHTRLTD--------MQ 915
Query: 175 GEDLTSKITEALNRARTFQSKFPSFMTVMKPAYVNGYS--LHIPSFFAKKYLK-NETDVL 231
+ L SK+ S+ P + +++ + V+G S + I +A YL E ++
Sbjct: 916 KQQLESKV-------GAIHSEIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMT 968
Query: 232 LQVLDGRTWSV-----SFNLGKFNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFP 286
LQ G+ W V + + GW +F NNL+VGD+CLFEL K S+ V I P
Sbjct: 969 LQ-RHGKNWEVLCRTKDTRTKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIP 1027
Score = 70.9 bits (172), Expect = 8e-11
Identities = 71/300 (23%), Positives = 111/300 (36%), Gaps = 66/300 (22%)
Query: 10 IPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMVL 69
IP F + + + LK +G + K + GW +FA + + G ++
Sbjct: 164 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLV 223
Query: 70 FEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSP 129
F Y S F V IFD S ++ SH + + + D +EIL C L++
Sbjct: 224 FRYTGNSQFEVKIFDPSGC-VKAASHNAVNIGQHAQNMQGDPIEILS----CSDEHLRAQ 278
Query: 130 M---------------SCPKPRKKLRTSTSEDVGESP--ELHNLPKQVKIEDDAGRTTEC 172
+C K K S+SED E+P E+H ++K+E+
Sbjct: 279 SLTTERQNQPEKDVIDNCNKKMKTEHASSSEDDQETPTAEVH----RMKVEE-------- 326
Query: 173 LEGEDLTSKITEALNRARTFQSKFPSFMTVMKPAYVNGYSLH--IPSFFAKKYLKNETDV 230
R S P F+ VMK + V + I +A +Y +
Sbjct: 327 ---------------MVRAIHSNHPVFVAVMKKSNVTRQPCYVAISRKYANEYFPGGDQM 371
Query: 231 LLQVLDGRTWSVSFNLGK-----FNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIF 285
L G+ W V F + K + GW+KFT N EL PL+L + +F
Sbjct: 372 LTLQRHGKRWQVKFCISKRKLRMLSKGWRKFTRDN----------ELQHWAPLALFITLF 421
Score = 47.0 bits (110), Expect = 0.001
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 417 RLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHI 453
RLS GW FA+++ L+VGD C+FEL+ K++ ++VHI
Sbjct: 989 RLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHI 1025
Score = 38.9 bits (89), Expect = 0.34
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 10 IPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMVL 69
IP+ F + + G ++ L+P G + + +K + +GW+ F + L+ G ++
Sbjct: 467 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 526
Query: 70 FEYKDTSHFGVHIFDKSTLE 89
F+Y V IFD S E
Sbjct: 527 FKYNGDFLLQVLIFDPSGCE 546
Score = 38.5 bits (88), Expect = 0.44
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 207 YVNGYSLHIPSFFAKKYLKNE----------TDVLLQVLDGRTWSVSF--NLGKFN--AG 252
Y N + + I F + + NE + LQ+ DG T+ V NLGK + +G
Sbjct: 731 YKNFFKVMIGRFRERMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSG 790
Query: 253 WKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIF 285
WK F + ++L++GD +F + LKVLIF
Sbjct: 791 WKAFVTAHDLQMGDFLVFSYDGI--SKLKVLIF 821
>emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana]
Length = 337
Score = 82.0 bits (201), Expect = 3e-14
Identities = 87/314 (27%), Positives = 133/314 (41%), Gaps = 52/314 (16%)
Query: 1 MLMESFVQR--IPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVW-FQNGWKDFA 57
+L+ F R IP F+ + LK P G + + + D F+ GW F
Sbjct: 28 LLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFV 87
Query: 58 KYYSLDHGHMVLFEYKDTSHFGVHIFDKSTL---------------EIRYPSHEN-QDEE 101
K +SL+ +++F++ S F V +FD TL E SH + EE
Sbjct: 88 KDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEE 147
Query: 102 HNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVGESPELHNLPKQVK 161
H ID S + L I P ++ KK+R S D NL ++
Sbjct: 148 HINSDIDTASAQ-LPVISPTSTVRVSEGKYPLSGFKKMRRELSND--------NLDQKAD 198
Query: 162 IEDDAGRTTECLEGEDLTSKITEALNRARTFQSKFPSFMTVMKPAYV-NGYSLHIP-SFF 219
+E + + + +AL+ A+ S F+ MK ++V + L IP +
Sbjct: 199 VEMISAGSNK------------KALSLAKRAISP-DGFLVFMKRSHVVSKCFLTIPYKWC 245
Query: 220 AKKYLKNETDVLLQVLDGRTWSVSFNL------GKFNAGWKKFTSVNNLKVGDVCLFE-- 271
K L +V++QV D W + FN+ G + GWKKF NNL+ GDVC+FE
Sbjct: 246 VKNMLITRQEVVMQV-DQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPA 304
Query: 272 LNKSVPLSLKVLIF 285
+++ PL L V IF
Sbjct: 305 NSETKPLHLNVYIF 318
Score = 47.4 bits (111), Expect = 0.001
Identities = 58/244 (23%), Positives = 97/244 (38%), Gaps = 38/244 (15%)
Query: 249 FNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFP---LAEEPHSL---PRSLVQGD 302
F GW KF ++L+ D+ +F+ + +VL+F L E+P S +
Sbjct: 79 FRFGWDKFVKDHSLEENDLLVFKFHGVS--EFEVLVFDGQTLCEKPTSYFVRKCGHAEKT 136
Query: 303 RVNHINYGRFRYTESQNVLTSKCAETIKRTSKL------------------ISPCPLKNA 344
+ +H Y + + S S I TS + +S L
Sbjct: 137 KASHTGYEQEEHINSDIDTASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQK 196
Query: 345 ALEEANKFNSNNPFFIVN---IAPDKNRDYRPR---VPKLFIRKHFN----DIQQSEQTV 394
A E SN + I+PD + R V K F+ + ++ + Q V
Sbjct: 197 ADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEV 256
Query: 395 ILQCEKKLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPV--LDVH 452
++Q ++ +K + +G +S GW +F + + L GD CVFE N E L+V+
Sbjct: 257 VMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVY 316
Query: 453 IYRG 456
I+RG
Sbjct: 317 IFRG 320
>gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 363
Score = 80.5 bits (197), Expect = 1e-13
Identities = 84/360 (23%), Positives = 153/360 (42%), Gaps = 74/360 (20%)
Query: 7 VQRIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGH 66
+Q+IP++F + L G W + +F +GWK+F + S+ G
Sbjct: 1 MQKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQ 60
Query: 67 MVLFEYKDTSHFGVHIFDKSTLE--IRYPSHENQD------------------------- 99
++F Y S F V +F+ S ++ + +H +++
Sbjct: 61 FLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMAPA 120
Query: 100 -EEHNP---------DQIDDDSVEILDKIPP---CKKTKLKSPMSCPKPRKKLRTS---- 142
+E+N D + +D V + K C+ ++ K + K TS
Sbjct: 121 LKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNST 180
Query: 143 -----TSEDVGESPELHNLPKQVK-IEDDAGRTTECL-EGEDLTSKITE----------- 184
+S++ S + N P ++ + + R C+ +G+ + I++
Sbjct: 181 RGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDH 240
Query: 185 ALNRARTFQSKFPSFMTVMKPAYVN-GYSLHIPSFFAKKYLKNETD-VLLQVLDGRTWSV 242
AL RAR F+SK P + +M +YV G+ ++IP F ++ L + + L G+ W V
Sbjct: 241 ALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEV 300
Query: 243 SF------NLGKFNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEE--PHSL 294
++ ++G F+ GW KF NNL+ DVC+FEL + ++KV I+ + E PH L
Sbjct: 301 NYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKD--NIKVHIYRVVPEITPHKL 358
Score = 50.1 bits (118), Expect = 1e-04
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 342 KNAALEEANKFNSNNPFFI-VNIAPDKNRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
K+ AL+ A +F S NPF + + + + +P F+R+ +++ + +
Sbjct: 238 KDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLP--HTNKRITLWDPQG 295
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K V Y + S GW +FA + LE D CVFEL+ K++ + VHIYR
Sbjct: 296 KAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDN--IKVHIYR 348
>dbj|BAB01695.1| unnamed protein product [Arabidopsis thaliana]
Length = 230
Score = 77.0 bits (188), Expect = 1e-12
Identities = 56/174 (32%), Positives = 87/174 (49%), Gaps = 14/174 (8%)
Query: 126 LKSPMSCPK-PRKKLRTSTSEDVGE----SPELHNLPKQVKIEDDAGRTTECLEGEDLTS 180
+K P PK P+K+ R + D E +P + + K + A + E+
Sbjct: 59 VKEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERE- 117
Query: 181 KITEALNRARTFQSKFPSFMTVMKPAYV-NGYSLHIPSFFAKKYLKNETDVLLQVLDGRT 239
A+N A+TF+ P F V++P+Y+ G +++PS FA+KYL + + L +
Sbjct: 118 ---RAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ 174
Query: 240 WSVS--FNLG--KFNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAE 289
W V + G KF+ GW +FT NNL GDVC+FEL ++ LKV F + E
Sbjct: 175 WPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVNE 228
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/115 (33%), Positives = 56/115 (47%), Gaps = 6/115 (5%)
Query: 342 KNAALEEANKFNSNNPFFIVNIAPDK-NRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
+ A+ A F NPFF V + P R +P F K+ + I + +Q +
Sbjct: 116 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKVQLAE 172
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K PV+ C K G ++ S+GW EF ++ L GD CVFEL+ D VL V +R
Sbjct: 173 KQWPVR--CLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 225
>gb|AAP40368.1| unknown protein [Arabidopsis thaliana] gi|29824327|gb|AAP04124.1|
unknown protein [Arabidopsis thaliana]
gi|30685143|ref|NP_188526.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 209
Score = 76.6 bits (187), Expect = 1e-12
Identities = 41/115 (35%), Positives = 61/115 (52%), Gaps = 5/115 (4%)
Query: 3 MESFVQRIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSL 62
M+ + +IP F K G ++ L+ P G I + ++WF GW +FA+ +S+
Sbjct: 39 MKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSI 98
Query: 63 DHGHMVLFEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDK 117
+ GH +LFEYK+ S F V IF+ S E +YP D H D DDD ++I K
Sbjct: 99 EEGHFLLFEYKENSSFRVIIFNVSACETKYP----LDAVHIIDS-DDDIIDITGK 148
>dbj|BAB01692.1| unnamed protein product [Arabidopsis thaliana]
Length = 193
Score = 76.6 bits (187), Expect = 1e-12
Identities = 41/115 (35%), Positives = 61/115 (52%), Gaps = 5/115 (4%)
Query: 3 MESFVQRIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSL 62
M+ + +IP F K G ++ L+ P G I + ++WF GW +FA+ +S+
Sbjct: 39 MKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSI 98
Query: 63 DHGHMVLFEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDK 117
+ GH +LFEYK+ S F V IF+ S E +YP D H D DDD ++I K
Sbjct: 99 EEGHFLLFEYKENSSFRVIIFNVSACETKYP----LDAVHIIDS-DDDIIDITGK 148
>gb|AAQ89626.1| At4g01580 [Arabidopsis thaliana] gi|7268201|emb|CAB77728.1|
hypothetical protein [Arabidopsis thaliana]
gi|15234250|ref|NP_192068.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|3859591|gb|AAC72857.1| T15B16.18 gene product
[Arabidopsis thaliana] gi|51968808|dbj|BAD43096.1|
hypothetical protein [Arabidopsis thaliana]
gi|7487022|pir||T02015 hypothetical protein T15B16.18 -
Arabidopsis thaliana
Length = 190
Score = 76.3 bits (186), Expect = 2e-12
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 3 MESFVQRIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSL 62
M+ + RIP F K G ++ L P G I + ++WF GW +FA+ +S+
Sbjct: 39 MKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSI 98
Query: 63 DHGHMVLFEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDK 117
+ GH +LFEYK S F V IF+ S E YP D H D DDD +EI K
Sbjct: 99 EEGHFLLFEYKKNSSFRVIIFNASACETNYP----LDAVHIIDS-DDDVIEITGK 148
>gb|AAD43153.1| Unknown Protein [Arabidopsis thaliana] gi|51972154|gb|AAU15181.1|
At1g49480 [Arabidopsis thaliana]
gi|18402653|ref|NP_564547.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|25373244|pir||E96531 hypothetical protein F13F21.8
[imported] - Arabidopsis thaliana
Length = 226
Score = 75.1 bits (183), Expect = 4e-12
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 89 EIRYPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVG 148
++ YPS+ E N +++ K ++T P K +K + E+V
Sbjct: 26 KVIYPSNPESTEPVNKGYGGSTAIQSFFKESKAEET----PKVLKKRGRKKKNPNPEEVN 81
Query: 149 ES-PELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSKFPSFMTVMKPAY 207
S P + + K + A + E+ A+N A+TF+ P F V++P+Y
Sbjct: 82 SSTPGGDDSENRSKFYESASARKRTVTAEERE----RAVNAAKTFEPTNPYFRVVLRPSY 137
Query: 208 V-NGYSLHIPSFFAKKYLKNETDVLLQVLDGRTWSVS--FNLG--KFNAGWKKFTSVNNL 262
+ G +++PS FA+KYL + + L + W V + G KF+ GW +FT NN+
Sbjct: 138 LYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKFSQGWYEFTLENNI 197
Query: 263 KVGDVCLFELNKSVPLSLKVLIFPLAE 289
GDVC+FEL ++ L+V F + E
Sbjct: 198 GEGDVCVFELLRTRDFVLEVTAFRVNE 224
Score = 57.8 bits (138), Expect = 7e-07
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 342 KNAALEEANKFNSNNPFFIVNIAPDK-NRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
+ A+ A F NP+F V + P R +P F K+ + I + LQ +
Sbjct: 112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKLQLGE 168
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K PV+ C K G ++ S+GW EF ++ + GD CVFEL+ D VL+V +R
Sbjct: 169 KQWPVR--CLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221
>gb|AAK68808.1| Unknown protein [Arabidopsis thaliana]
Length = 226
Score = 73.2 bits (178), Expect = 2e-11
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 89 EIRYPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVG 148
++ YPS E N ++ K ++T P K +K + E+V
Sbjct: 26 KVIYPSIPESTEPVNKGYGGSTDIQSFFKESKAEET----PKVLKKRGRKKKNPNPEEVN 81
Query: 149 ES-PELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSKFPSFMTVMKPAY 207
S P + + K + A + E+ A+N A+TF+ P F V++P+Y
Sbjct: 82 SSTPGGDDSENRSKFYESASARKRTVTAEERE----RAVNAAKTFEPTNPYFRVVLRPSY 137
Query: 208 V-NGYSLHIPSFFAKKYLKNETDVLLQVLDGRTWSVS--FNLG--KFNAGWKKFTSVNNL 262
+ G +++PS FA+KYL + + L + W V + G KF+ GW +FT NN+
Sbjct: 138 LYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKFSQGWYEFTLENNI 197
Query: 263 KVGDVCLFELNKSVPLSLKVLIFPLAE 289
GDVC+FEL ++ L+V F + E
Sbjct: 198 GEGDVCVFELLRTRDFVLEVTAFRVNE 224
Score = 57.8 bits (138), Expect = 7e-07
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 342 KNAALEEANKFNSNNPFFIVNIAPDK-NRDYRPRVPKLFIRKHFNDIQQSEQTVILQCEK 400
+ A+ A F NP+F V + P R +P F K+ + I + LQ +
Sbjct: 112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGF---IKLQLGE 168
Query: 401 KLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPVLDVHIYR 455
K PV+ C K G ++ S+GW EF ++ + GD CVFEL+ D VL+V +R
Sbjct: 169 KQWPVR--CLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221
>ref|NP_683415.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 250
Score = 72.0 bits (175), Expect = 4e-11
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 7 VQRIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGH 66
+ ++P F R+G + + L+ P G I + +VWF+ GW +FA+ +SL GH
Sbjct: 47 MMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGH 105
Query: 67 MVLFEYKDTSHFGVHIFDKSTLEIRYP---SHENQDEEHNPD-------QIDDDSVEILD 116
+ F Y+ S F V IFD S EI YP + +N++E + D + DD E++D
Sbjct: 106 FLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGFTGFESSDDDGEVVD 165
Query: 117 KIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVGESPELHNLPKQV 160
KK K K ++ + E S E +L K +
Sbjct: 166 MDELLKKKKKKPRVNIKSENVIILDDVEEIAMRSLEEEDLKKNL 209
>ref|XP_463206.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201561|gb|AAO34499.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 306
Score = 71.2 bits (173), Expect = 6e-11
Identities = 63/280 (22%), Positives = 111/280 (39%), Gaps = 49/280 (17%)
Query: 10 IPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMVL 69
IPN F +GG + L+ G + + +K G V Q+GW + + L G ++
Sbjct: 46 IPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFLV 105
Query: 70 FEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSP 129
F+Y S IFD S E C+K P
Sbjct: 106 FKYSGDSQLKTLIFDSSGCE-----------------------------KVCEK-----P 131
Query: 130 MSCPKPRKKLRTSTSEDVGESPELHNLPKQVKIE-DDAGRTTECLEGEDLTSKITEA--- 185
+ + S+D + + ++ +Q ++ + G E + G L S+
Sbjct: 132 VDMSGRSYDIAMRNSQDEKKKRKQRDISRQGTVKPSEEGLKAELVPGCILPSRTDLTRLQ 191
Query: 186 ----LNRARTFQSKFPSFMTVMKPAYVNGY--SLHIPSFFAKKYLKNETDVLLQVLDGRT 239
+ + + S+ P + VM + ++G ++ I +A YL E ++ G++
Sbjct: 192 KNILIEKVKAINSETPIYGYVMNNSSIHGIPCTVEISKKYADVYLPFEDGTVVLQHHGKS 251
Query: 240 WSVSFNLGKFNA-----GWKKFTSVNNLKVGDVCLFELNK 274
W+V L K N+ GW++F N L +GD+CLF+L K
Sbjct: 252 WNVRCCLTKQNSKRFLKGWRQFAGDNKLHLGDICLFDLLK 291
Score = 64.3 bits (155), Expect = 8e-09
Identities = 70/252 (27%), Positives = 114/252 (44%), Gaps = 35/252 (13%)
Query: 230 VLLQVLDGRTWSVSF--NLGK--FNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIF 285
+ L+ G T+ V N G+ +GW + S ++LK+GD +F+ S LK LIF
Sbjct: 62 IKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFLVFKY--SGDSQLKTLIF 119
Query: 286 P------LAEEPHSLP-RSLVQGDRVNHINYGRFRYTESQNVLTSKCAETIKRTSKLISP 338
+ E+P + RS R + + + + T K +E + ++L+
Sbjct: 120 DSSGCEKVCEKPVDMSGRSYDIAMRNSQDEKKKRKQRDISRQGTVKPSEEGLK-AELVPG 178
Query: 339 CPL----------KNAALEEANKFNSNNPFF--IVNIAPDKNRDYRPRVPKLFIRKHFND 386
C L KN +E+ NS P + ++N N + I K + D
Sbjct: 179 CILPSRTDLTRLQKNILIEKVKAINSETPIYGYVMN-----NSSIHGIPCTVEISKKYAD 233
Query: 387 IQQ--SEQTVILQCEKKLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELI-N 443
+ + TV+LQ K V+ C K+ R KGW +FA +KL +GD C+F+L+ +
Sbjct: 234 VYLPFEDGTVVLQHHGKSWNVRC-CLTKQNSKRFLKGWRQFAGDNKLHLGDICLFDLLKD 292
Query: 444 KEDPVLDVHIYR 455
K+ V+DVHI R
Sbjct: 293 KKKYVMDVHIIR 304
>emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana]
gi|4490295|emb|CAB38786.1| hypothetical protein
[Arabidopsis thaliana] gi|15234131|ref|NP_195054.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana] gi|7485659|pir||T05979 hypothetical protein
F17M5.40 - Arabidopsis thaliana
Length = 461
Score = 67.4 bits (163), Expect = 9e-10
Identities = 79/346 (22%), Positives = 133/346 (37%), Gaps = 71/346 (20%)
Query: 5 SFVQRIPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVW-FQNGWKDFAKYYSLD 63
+ +Q IP F+ + LK P G + + + D F+ GW F K +SL+
Sbjct: 103 NLLQVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLE 162
Query: 64 HGHMVLFEYKDTSHFGVHIFDKSTL----------------------EIRYPSHENQDEE 101
+++F++ S F V +FD TL + S +
Sbjct: 163 ENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKGIIDFNATSSRSPKRH 222
Query: 102 HNPDQIDDDSVEILDKIPPCKKT--------------KLKSPMSCPKPRKKLRTSTSEDV 147
NPD ++ + L PP K+ +P+ T ++
Sbjct: 223 FNPDDVETTPNQQLVISPPVDNELEDLIDIDLDFDIDKILNPLLVAS-----HTGYEQEE 277
Query: 148 GESPELHNLPKQVKIEDDAG--RTTEC-------------LEGEDLTSKITEALNRARTF 192
+ ++ Q+ + R +E L ++L K + +A +
Sbjct: 278 HINSDIDTASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKAAGSNKKALSL 337
Query: 193 QSKFPS---FMTVMKPAYV-NGYSLHIP-SFFAKKYLKNETDVLLQVLDGRTWSVSFNL- 246
+ S F+ MK ++V + L IP + K L +V++QV D W + FN+
Sbjct: 338 AKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQV-DQTKWEMKFNIF 396
Query: 247 -----GKFNAGWKKFTSVNNLKVGDVCLFE--LNKSVPLSLKVLIF 285
G + GWKKF NNL+ GDVC+FE +++ PL L V IF
Sbjct: 397 GARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIF 442
Score = 47.0 bits (110), Expect = 0.001
Identities = 23/69 (33%), Positives = 38/69 (54%), Gaps = 2/69 (2%)
Query: 390 SEQTVILQCEKKLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACVFELINKEDPV- 448
+ Q V++Q ++ +K + +G +S GW +F + + L GD CVFE N E
Sbjct: 376 TRQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPL 435
Query: 449 -LDVHIYRG 456
L+V+I+RG
Sbjct: 436 HLNVYIFRG 444
>ref|XP_463193.1| putative auxin response factor [Oryza sativa (japonica
cultivar-group)] gi|28201557|gb|AAO34495.1| putative
auxin response factor [Oryza sativa (japonica
cultivar-group)]
Length = 545
Score = 62.4 bits (150), Expect = 3e-08
Identities = 69/336 (20%), Positives = 128/336 (37%), Gaps = 31/336 (9%)
Query: 10 IPNNFTKRYGGDMANPTFLKPPDGTDWKIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMVL 69
IPN F ++GG ++ L+ P G + + SK Q GW+ F + ++ +L
Sbjct: 43 IPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL 102
Query: 70 FEYKDTSH--FGVHIFDKSTLEIRYPSHENQDEEHNPDQI---DDDSVEILDKIPPCKKT 124
F + S GV + +++ +H++ + ++ + S K T
Sbjct: 103 FRHIKNSRRASGVQERNADPIDVSSSTHDDTVQSSGGERFARSESGSDSQHSKTAKLAAT 162
Query: 125 KLKSPMSCPKPRKKLRTSTSEDVG---ESPELHNLPKQVKIEDDAGRTTECLEGEDLTSK 181
C K +S+ + P++ +P V G +L+
Sbjct: 163 CSSGGSECTGEEAKESSSSEHESSYDLVDPQIAPMPGYV-----------LSRGTNLSQA 211
Query: 182 ITEALNR-ARTFQSKFPSFMTVMKPAYVNGY--SLHIPSFFAKKYLKNETDVLLQVLDG- 237
E L+ + + + P ++T MK + VN + SL I +A Y + + + G
Sbjct: 212 HEEKLDMLVQEIRPEIPLYVTTMKHSNVNSHHASLVIAKHYACAYFPHTSQTITLKWHGK 271
Query: 238 -RTWSVSFNLGKFNAG------WKKFTSVNNLKVGDVCLFELNKSVPLSLKVLIFPLAEE 290
R W F + K G W F N++K GD+C+F L + + L E
Sbjct: 272 NRKWHPKFYIRKDQVGYILHGRWIDFVRHNHVKEGDICIFHLKNFNGRKFRATVHLLRET 331
Query: 291 -PHSLPRSLVQGDRVNHINYGRFRYTESQNVLTSKC 325
PHS + + R + T+ + V +++C
Sbjct: 332 IPHSFGALHIPKRFESRNGRMRLKMTDDRRVSSTEC 367
Score = 47.4 bits (111), Expect = 0.001
Identities = 55/267 (20%), Positives = 108/267 (39%), Gaps = 25/267 (9%)
Query: 37 KIYHSKTDGDVWFQNGWKDFAKYYSLDHGHMVLFEYKDTSHFGVHIFDKSTLEIRYPSHE 96
K Y K W DF ++ + G + +F K+ F F + +R
Sbjct: 278 KFYIRKDQVGYILHGRWIDFVRHNHVKEGDICIFHLKN---FNGRKFRATVHLLRETIPH 334
Query: 97 NQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVGESPELHN- 155
+ H P + + + + K+ ++ S C + + T+ + ++ + +N
Sbjct: 335 SFGALHIPKRFESRNGRMRLKMTDDRRV---SSTECRRGTMEPSTTNVKKEADNEQCNNG 391
Query: 156 ---LPKQVKIEDDAGRTTECLEGEDLT---SKITEALNRARTFQSKFPSFMTVMKPAYVN 209
+ + + G + L + ++ + + + QS+ P ++++M + V
Sbjct: 392 QGKRQEPLNFDVSVGSSKPYLTADRVSLTEEQFMKVEENVHSIQSEGPIYVSIMNKSNVG 451
Query: 210 GYSLHIPSF---FAKKYLKN--ETDVLLQVLDGRTWSV-----SFNLGKFNAGWKKFTSV 259
L+I + FA +YL +T LL G+ W V S + F GW+ F
Sbjct: 452 TDGLYIITLGRQFAIRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRD 511
Query: 260 NNLKVGDVCLFELNKSVP--LSLKVLI 284
N L+ D+CLF+L K+ L++KV I
Sbjct: 512 NRLQTEDICLFQLTKNSERGLAMKVHI 538
>dbj|BAD81380.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 473
Score = 58.9 bits (141), Expect = 3e-07
Identities = 56/216 (25%), Positives = 103/216 (46%), Gaps = 42/216 (19%)
Query: 94 SHENQDEEHNPDQI----DDDSVEILDKIPPCKKTKLKS-----------PMSC-PKPRK 137
S ++D++ P I D+D + + ++ P K K P +C +
Sbjct: 19 SGSDRDDDIGPRAIIIDCDEDDTDDVMEVVPLKMLMPKEVENEQRTVPGIPQTCNTQNTS 78
Query: 138 KLRTSTSEDV--GESPELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSK 195
RT+T+E G++ LPK+ ++ G A+ RA+ Q+K
Sbjct: 79 NGRTNTTEVPVKGQNKCASYLPKKSSVQAFCG----------------SAMKRAQEIQTK 122
Query: 196 FP----SFMTVMKPAYV-NGYSLHIPSFFAKKYL-KNETDVLLQVLDGRTWSVSFNLGK- 248
P SF+ M ++V +G+ L +P+ F KYL K++TD++L+ +G + ++ GK
Sbjct: 123 LPAEHPSFVKHMLHSHVVSGFWLGLPAGFCNKYLPKHDTDIVLEDENGNNHNTNYLGGKQ 182
Query: 249 -FNAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKVL 283
+AGW+ F +++KVGDV +FEL + + ++
Sbjct: 183 GLSAGWRGFAINHDIKVGDVVVFELVSTTKFKVHII 218
Score = 34.7 bits (78), Expect = 6.4
Identities = 31/125 (24%), Positives = 48/125 (37%), Gaps = 30/125 (24%)
Query: 52 GWKDFAKYYSLDHGHMVLFEYKDTSHFGVHIFDKSTLEIRYPSHENQDEEHNPDQIDDDS 111
GW+ FA + + G +V+FE T+ F VHI I D +
Sbjct: 187 GWRGFAINHDIKVGDVVVFELVSTTKFKVHI------------------------IRDKN 222
Query: 112 VEILDKIPPCKKTKLKSPMSCPKPR-KKLRTSTSEDVGESPELHNLPKQVKIEDDAGRTT 170
+ D+ P LKS +C K + K T + E PE + +V +D
Sbjct: 223 ISPTDRAP-----GLKSFYACKKRKISKEATDNATKPKEDPETTRVSSKVAHDDTQNLVH 277
Query: 171 ECLEG 175
E ++G
Sbjct: 278 EAIDG 282
>dbj|BAB08399.1| unnamed protein product [Arabidopsis thaliana]
gi|15238713|ref|NP_197301.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 307
Score = 58.2 bits (139), Expect = 5e-07
Identities = 65/269 (24%), Positives = 113/269 (41%), Gaps = 34/269 (12%)
Query: 28 LKPPDGTDWKIYHSKTDGDVWFQN-GWKDFAKYYSLDHGHMVLFEYKDTSHFGVHIFDKS 86
L+ P G W++ SK + ++ GW F L + F ++ F V IF+
Sbjct: 56 LRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFEAD 115
Query: 87 TLEIRYP-------SHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKL 139
E+ P S N+ EE D K+ +++S P K
Sbjct: 116 GTEMLRPRKTITSSSGRNKREERKSIYKDVK-----------KEEEIESWSESSHPCHKT 164
Query: 140 RTSTSEDVGESPELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTFQSKFPSF 199
STS + + EL NL K+ + + +T++ + E +++ + A T S P F
Sbjct: 165 AESTSGRLTQKQEL-NLRKKEADKTEKSKTSKKKKVETVSND-----SEAGT-SSLIPEF 217
Query: 200 MTVMKPAYVNGYSLHIPSFFAKKYLKNETDVL-LQVLDGR-TWSVSFNL----GKFNAGW 253
+K +++ L IP F ++ ET + + G+ +W V++ + +F+ GW
Sbjct: 218 KLTIKKSHL--LFLGIPKKFVDMHMPTETTMFKIHYPRGKKSWDVTYVVTDVQSRFSGGW 275
Query: 254 KKFTSVNNLKVGDVCLFELNKSVPLSLKV 282
+ L VGDVC F+L K + +KV
Sbjct: 276 SRLAKELGLLVGDVCTFKLIKPTEMRVKV 304
Score = 35.8 bits (81), Expect = 2.9
Identities = 52/244 (21%), Positives = 94/244 (38%), Gaps = 33/244 (13%)
Query: 230 VLLQVLDGRTWSVSFNLGKF-----NAGWKKFTSVNNLKVGDVCLFELNKSVPLSLKV-- 282
++L+V GR+W V + + GW +F + N L + F ++ ++ +
Sbjct: 54 MVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFE 113
Query: 283 -----LIFPLAEEPHSLPRSLVQGDRVNHINYGRFRYTESQNVLTSKCAETIKRTSKLIS 337
++ P S R+ + + + + + ES + + C +T + TS ++
Sbjct: 114 ADGTEMLRPRKTITSSSGRNKREERKSIYKDVKKEEEIESWSESSHPCHKTAESTSGRLT 173
Query: 338 PCPLKNAALEEANKFNSNNPFF---IVNIAPDKNRDYRPRVPK------------LFIRK 382
N +EA+K + + ++ D +P+ L I K
Sbjct: 174 QKQELNLRKKEADKTEKSKTSKKKKVETVSNDSEAGTSSLIPEFKLTIKKSHLLFLGIPK 233
Query: 383 HFNDIQQSEQTVILQCE----KKLCPVKLTCYPKKGPSRLSKGWVEFAKKSKLEVGDACV 438
F D+ +T + + KK V T SR S GW AK+ L VGD C
Sbjct: 234 KFVDMHMPTETTMFKIHYPRGKKSWDV--TYVVTDVQSRFSGGWSRLAKELGLLVGDVCT 291
Query: 439 FELI 442
F+LI
Sbjct: 292 FKLI 295
>ref|NP_913535.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 524
Score = 57.8 bits (138), Expect = 7e-07
Identities = 36/96 (37%), Positives = 61/96 (63%), Gaps = 8/96 (8%)
Query: 185 ALNRARTFQSKFP----SFMTVMKPAYV-NGYSLHIPSFFAKKYL-KNETDVLLQVLDGR 238
A+ RA+ Q+K P SF+ M ++V +G+ L +P+ F KYL K++TD++L+ +G
Sbjct: 137 AMKRAQEIQTKLPAEHPSFVKHMLHSHVVSGFWLGLPAGFCNKYLPKHDTDIVLEDENGN 196
Query: 239 TWSVSFNLGK--FNAGWKKFTSVNNLKVGDVCLFEL 272
+ ++ GK +AGW+ F +++KVGDV +FEL
Sbjct: 197 NHNTNYLGGKQGLSAGWRGFAINHDIKVGDVVVFEL 232
>emb|CAB89352.1| putative protein [Arabidopsis thaliana] gi|67633794|gb|AAY78821.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana] gi|15242512|ref|NP_196540.1| transcriptional
factor B3 family protein [Arabidopsis thaliana]
gi|11288891|pir||T49920 hypothetical protein F17I14.30 -
Arabidopsis thaliana
Length = 308
Score = 53.5 bits (127), Expect = 1e-05
Identities = 57/260 (21%), Positives = 100/260 (37%), Gaps = 24/260 (9%)
Query: 33 GTDWKIYHSKTDGDVWFQ-NGWKDFAKYYSLDHGHMVLFEYKDTSHFGVHIFDKSTLEIR 91
G WK+ SK + + +GW+ F +L + F +K F V IF+K E+
Sbjct: 60 GNSWKVKISKNPRFYFMEKSGWEKFVIDNALGDHEFLTFTHKGQMSFTVKIFNKDGKEMM 119
Query: 92 YPSHENQDEEHNPDQIDDDSVEILDKIPPCKKTKLKSPMSCPKPRKKLRTSTSEDVGESP 151
P + + V+ +++ ++ + P + + + G
Sbjct: 120 QPPQSRASFASSSRVKTEQDVKREEEVLVSSDSRSRGPTTAAETNRG---------GSYK 170
Query: 152 ELHNLPKQVKIEDDAGRTTECLEGEDLTSKITEALNRARTF----QSKFPSFMTVMKPAY 207
N K+ E + TE + T ++ +++ R + S F + +Y
Sbjct: 171 RKLNFGKKKAEETQTYKRTERTQNSKRTERV---VSKERVYAGEPSSSVAGFKIFISKSY 227
Query: 208 VNGYSLHIPSFFAKKYLKNETDVLLQVLDG-RTWSVSFNLGK----FNAGWKKFTSVNNL 262
+ SL IP F K +T V + DG +TW V F + + F+ GWK+ +
Sbjct: 228 IK--SLAIPKPFGNYMPKEKTRVKIHHPDGEKTWKVVFVVKERGQIFSGGWKRLCKEYPV 285
Query: 263 KVGDVCLFELNKSVPLSLKV 282
GD C F L + L L V
Sbjct: 286 VFGDTCKFTLITPLELLLVV 305
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 828,604,905
Number of Sequences: 2540612
Number of extensions: 36518793
Number of successful extensions: 87877
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 87450
Number of HSP's gapped (non-prelim): 407
length of query: 457
length of database: 863,360,394
effective HSP length: 131
effective length of query: 326
effective length of database: 530,540,222
effective search space: 172956112372
effective search space used: 172956112372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0040.4