BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0040.3
(441 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis tha... 130 8e-29
gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa] 110 7e-23
gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa] 110 1e-22
emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana] 81 7e-14
dbj|BAB01692.1| unnamed protein product [Arabidopsis thaliana] 72 3e-11
gb|AAP40368.1| unknown protein [Arabidopsis thaliana] gi|2982432... 72 3e-11
dbj|BAB01695.1| unnamed protein product [Arabidopsis thaliana] 72 4e-11
gb|AAQ89626.1| At4g01580 [Arabidopsis thaliana] gi|7268201|emb|C... 70 2e-10
gb|AAD43153.1| Unknown Protein [Arabidopsis thaliana] gi|5197215... 69 2e-10
gb|AAK68808.1| Unknown protein [Arabidopsis thaliana] 67 8e-10
dbj|BAB08399.1| unnamed protein product [Arabidopsis thaliana] g... 65 3e-09
ref|NP_683415.1| transcriptional factor B3 family protein [Arabi... 65 5e-09
gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa (ja... 64 9e-09
gb|AAD26962.1| hypothetical protein [Arabidopsis thaliana] gi|25... 62 4e-08
gb|AAX23816.1| hypothetical protein At2g16210 [Arabidopsis thali... 62 5e-08
dbj|BAA94979.1| unnamed protein product [Arabidopsis thaliana] g... 60 1e-07
dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana] g... 59 3e-07
gb|AAM67335.1| unknown [Arabidopsis thaliana] gi|9758891|dbj|BAB... 59 4e-07
gb|AAO89204.1| hypothetical protein [Arabidopsis thaliana] 58 5e-07
emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana] gi|4... 57 1e-06
>gb|AAM76973.1| reduced vernalization response 1 [Arabidopsis thaliana]
gi|21734794|gb|AAM76972.1| reduced vernalization
response 1 [Arabidopsis thaliana]
gi|30685150|ref|NP_188529.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 341
Score = 130 bits (327), Expect = 8e-29
Identities = 104/337 (30%), Positives = 148/337 (43%), Gaps = 59/337 (17%)
Query: 113 FFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFWFQKGW 172
F ++I ++ L +P+ F+ K+ +S V L PD W + K D+ WFQ GW
Sbjct: 6 FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGW 65
Query: 173 KEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYPSNENQGEEHN---------- 222
+EFV YS+ G+L++F ++ S F V+IF+ S EI Y S HN
Sbjct: 66 QEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFED 125
Query: 223 -PDQIGDEIL--------LPKKTKPKSPMSLSRPCKKLRTGKSK-----DVGKSPELRKR 268
D+ + I LP+ T P + S + L TG K K P+ R R
Sbjct: 126 LEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGR 185
Query: 269 KKVQVEGGEPSSLGPH---------FTAQGEARKYT-----------------PKNPSFT 302
KK + E +S P F ARK T P NP F
Sbjct: 186 KKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFR 245
Query: 303 VSLKPVIKLAYRPPV---PISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLSK 359
V L+P YR + P F +YL+ IK+++ E WPV +Y + G K S+
Sbjct: 246 VVLRP--SYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLY--KAGRAKFSQ 301
Query: 360 GWIQFAKESKLVGGDVCVFELINKDEENPVLEVHIFK 396
GW +F E+ L GDVCVFEL+ + VL+V F+
Sbjct: 302 GWYEFTLENNLGEGDVCVFELLR--TRDFVLKVTAFR 336
Score = 57.0 bits (136), Expect = 1e-06
Identities = 41/134 (30%), Positives = 65/134 (47%), Gaps = 9/134 (6%)
Query: 2 LIVSCFVQ----KLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQNVWEE 57
LI S +Q ++P+ F K+ D +S V L D W + K D+ IW Q+ W+E
Sbjct: 9 LIFSSTIQEKRLRVPDKFVSKFK-DELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQE 67
Query: 58 FVKLYYLDQGHMVWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNSATRFFRII 117
FV Y + G +L++F ++G S F V IF+ + EI Y ++ + R+
Sbjct: 68 FVDRYSIRIG----YLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLF 123
Query: 118 TPPCLEAAELILPN 131
E AE+I P+
Sbjct: 124 EDLEDEDAEVIFPS 137
>gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa]
Length = 329
Score = 110 bits (276), Expect = 7e-23
Identities = 91/310 (29%), Positives = 130/310 (41%), Gaps = 45/310 (14%)
Query: 113 FFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSY--FWFQK 170
F ++I ++ L +P+ F+ K+ +S V L PD W + K D+ WFQ
Sbjct: 6 FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQD 65
Query: 171 GWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYPSNE-NQGEEHNP------ 223
GW+EFV YS+ G+L++F ++ S F V I++ EI Y S HN
Sbjct: 66 GWQEFVDRYSIRIGYLLIFRYEGNSAFSVCIYNLPQSEINYHSTGLMDSASHNNHFKRPR 125
Query: 224 --DQIGDEILLPKKTKPKSPMSLSRPCKKLRTGKSKDVGKSPELRKRKK------VQVEG 275
+ + DE T + S K K P+ R RKK +V
Sbjct: 126 LFEDLEDEDAETLHTTASAIQSFFTGPVKPEEATPTQTSKVPKKRGRKKKNADHPEEVNS 185
Query: 276 GEPSSLGPH----FTAQGEARK-----------------YTPKNPSFTVSLKPVIKLAYR 314
P P F ARK + P NP F V L+P YR
Sbjct: 186 SAPRDDDPESRSKFYESASARKGTVNAEERERAVNAAKTFEPTNPFFRVVLRP--SYLYR 243
Query: 315 PPV---PISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLSKGWIQFAKESKLV 371
+ P F +YL+ IK+++ E WPV +Y + G K S+GW +F E+ L
Sbjct: 244 GCIMYLPSGFAEKYLSGISGFIKVQLGEKQWPVRCLY--KAGRAKFSQGWYEFTVENNLG 301
Query: 372 GGDVCVFELI 381
GDVCVFEL+
Sbjct: 302 EGDVCVFELL 311
Score = 54.3 bits (129), Expect = 7e-06
Identities = 35/103 (33%), Positives = 54/103 (51%), Gaps = 11/103 (10%)
Query: 2 LIVSCFVQ----KLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSD--IWLQNVW 55
LI S +Q ++P+ F K+ D +S V L D W + K D++ IW Q+ W
Sbjct: 9 LIFSSTIQEKRLRVPDKFVSKFK-DELSVAVALTVPDGHVWRVGLRKADNNNKIWFQDGW 67
Query: 56 EEFVKLYYLDQGHMVWHLVLFEFKGPSKFEVCIFDKNALEIKY 98
+EFV Y + G+ L++F ++G S F VCI++ EI Y
Sbjct: 68 QEFVDRYSIRIGY----LLIFRYEGNSAFSVCIYNLPQSEINY 106
>gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]
Length = 329
Score = 110 bits (274), Expect = 1e-22
Identities = 91/310 (29%), Positives = 130/310 (41%), Gaps = 45/310 (14%)
Query: 113 FFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSY--FWFQK 170
F ++I ++ L +P+ F+ ++ +S V L PD W + K D+ WFQ
Sbjct: 6 FHKLIFSSTIQEKRLRVPDKFVSRFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQD 65
Query: 171 GWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYPSNE-NQGEEHNP------ 223
GW+EFV YS+ G+L++F ++ S F V I++ EI Y S HN
Sbjct: 66 GWQEFVDRYSIRIGYLLIFRYEGNSAFSVCIYNLPQSEINYHSTGLMDSASHNNHFKRPR 125
Query: 224 --DQIGDEILLPKKTKPKSPMSLSRPCKKLRTGKSKDVGKSPELRKRKK------VQVEG 275
+ + DE T + S K K P+ R RKK +V
Sbjct: 126 LFEDLEDEDAETLHTTASAIQSFFTGPVKPEEATPTQTSKVPKKRGRKKKNADHPEEVNS 185
Query: 276 GEPSSLGPH----FTAQGEARKYT-----------------PKNPSFTVSLKPVIKLAYR 314
P P F ARK T P NP F V L+P YR
Sbjct: 186 SAPRDDDPESRSKFYESASARKRTVNAEERERAVNAAKTFEPTNPFFRVVLRP--SYLYR 243
Query: 315 PPV---PISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLSKGWIQFAKESKLV 371
+ P F +YL+ IK+++ E WPV +Y + G K S+GW +F E+ L
Sbjct: 244 GCIMYLPSGFAEKYLSGISGFIKVQLGEKQWPVRCLY--KAGRAKFSQGWYEFTVENNLG 301
Query: 372 GGDVCVFELI 381
GDVCVFEL+
Sbjct: 302 EGDVCVFELL 311
Score = 53.1 bits (126), Expect = 2e-05
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 2 LIVSCFVQ----KLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSD--IWLQNVW 55
LI S +Q ++P+ F ++ D +S V L D W + K D++ IW Q+ W
Sbjct: 9 LIFSSTIQEKRLRVPDKFVSRFK-DELSVAVALTVPDGHVWRVGLRKADNNNKIWFQDGW 67
Query: 56 EEFVKLYYLDQGHMVWHLVLFEFKGPSKFEVCIFDKNALEIKY 98
+EFV Y + G+ L++F ++G S F VCI++ EI Y
Sbjct: 68 QEFVDRYSIRIGY----LLIFRYEGNSAFSVCIYNLPQSEINY 106
>emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana]
Length = 337
Score = 80.9 bits (198), Expect = 7e-14
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 27/291 (9%)
Query: 127 LILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFW-FQKGWKEFVKYYSLDHGH 185
L++P F + V LK+P ++ + + D F+ GW +FVK +SL+
Sbjct: 37 LVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEND 96
Query: 186 LVLFEFKDASHFGVHIFDNSTLEIEYPSNE-----NQGEEHNPDQIG---DEILLPKKTK 237
L++F+F S F V +FD TL E P++ E+ G +E +
Sbjct: 97 LLVFKFHGVSEFEVLVFDGQTL-CEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDIDT 155
Query: 238 PKSPMSLSRPCKKLRTGKSKDVGKSP---------ELRKRKKVQVEGGEPSSLGPHFTAQ 288
+ + + P +R + GK P EL Q E S G + A
Sbjct: 156 ASAQLPVISPTSTVRVSE----GKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKAL 211
Query: 289 GEARKYTPKNPSFTVSLKP--VIKLAYRPPVPISFIREYLNEKKQTIKLKIEENLWPVEF 346
A++ + F V +K V+ + +P + + + +Q + +++++ W ++F
Sbjct: 212 SLAKRAISPD-GFLVFMKRSHVVSKCFLT-IPYKWCVKNMLITRQEVVMQVDQTKWEMKF 269
Query: 347 IYYPEHGSGKLSKGWIQFAKESKLVGGDVCVFELINKDEENPVLEVHIFKG 397
+ GSG +S GW +F +++ L GDVCVFE N + + L V+IF+G
Sbjct: 270 NIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRG 320
>dbj|BAB01692.1| unnamed protein product [Arabidopsis thaliana]
Length = 193
Score = 72.4 bits (176), Expect = 3e-11
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 103 NKQIPNSATR-FFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSK 161
++Q P S + FF+++ P ++ + +P F+K +S V L+ P I +
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKR 78
Query: 162 HDSYFWFQKGWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYPSNENQGEEH 221
WF +GW EF + +S++ GH +LFE+K+ S F V IF+ S E +YP + +
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHIIDS 138
Query: 222 NPDQI---GDEILLPKKTKPKS 240
+ D I G E K+K +S
Sbjct: 139 DDDIIDITGKEFDTEHKSKKRS 160
Score = 51.6 bits (122), Expect = 5e-05
Identities = 33/102 (32%), Positives = 49/102 (47%), Gaps = 6/102 (5%)
Query: 8 VQKLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQNVWEEFVKLYYLDQG 67
+ K+P F K G +S V L+ I + +IW W EF + + +++G
Sbjct: 43 MMKIPPRFV-KLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEG 101
Query: 68 HMVWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNS 109
H + LFE+K S F V IF+ +A E KY PL I +S
Sbjct: 102 HFL----LFEYKENSSFRVIIFNVSACETKY-PLDAVHIIDS 138
>gb|AAP40368.1| unknown protein [Arabidopsis thaliana] gi|29824327|gb|AAP04124.1|
unknown protein [Arabidopsis thaliana]
gi|30685143|ref|NP_188526.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 209
Score = 72.0 bits (175), Expect = 3e-11
Identities = 36/111 (32%), Positives = 60/111 (53%), Gaps = 1/111 (0%)
Query: 103 NKQIPNSATR-FFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSK 161
++Q P S + FF+++ P ++ + +P F+K +S V L+ P I +
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKR 78
Query: 162 HDSYFWFQKGWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYP 212
WF +GW EF + +S++ GH +LFE+K+ S F V IF+ S E +YP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129
Score = 51.6 bits (122), Expect = 5e-05
Identities = 33/102 (32%), Positives = 49/102 (47%), Gaps = 6/102 (5%)
Query: 8 VQKLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQNVWEEFVKLYYLDQG 67
+ K+P F K G +S V L+ I + +IW W EF + + +++G
Sbjct: 43 MMKIPPRFV-KLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEG 101
Query: 68 HMVWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNS 109
H + LFE+K S F V IF+ +A E KY PL I +S
Sbjct: 102 HFL----LFEYKENSSFRVIIFNVSACETKY-PLDAVHIIDS 138
>dbj|BAB01695.1| unnamed protein product [Arabidopsis thaliana]
Length = 230
Score = 71.6 bits (174), Expect = 4e-11
Identities = 63/197 (31%), Positives = 86/197 (42%), Gaps = 38/197 (19%)
Query: 232 LPKKTKPKSPMSLSRPCKKLRTGKSKD---VGKSPELRKRKKVQVEGGEPSSLGPH---- 284
LP+ T P + S + L TG K+ K P+ R RKK + E +S P
Sbjct: 35 LPESTVPANKGYASSAIQTLFTGPVKEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDP 94
Query: 285 -----FTAQGEARKYT-----------------PKNPSFTVSLKPVIKLAYRPPV---PI 319
F ARK T P NP F V L+P YR + P
Sbjct: 95 ENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRP--SYLYRGCIMYLPS 152
Query: 320 SFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLSKGWIQFAKESKLVGGDVCVFE 379
F +YL+ IK+++ E WPV +Y + G K S+GW +F E+ L GDVCVFE
Sbjct: 153 GFAEKYLSGISGFIKVQLAEKQWPVRCLY--KAGRAKFSQGWYEFTLENNLGEGDVCVFE 210
Query: 380 LINKDEENPVLEVHIFK 396
L+ + VL+V F+
Sbjct: 211 LLR--TRDFVLKVTAFR 225
Score = 37.7 bits (86), Expect = 0.72
Identities = 22/80 (27%), Positives = 37/80 (45%), Gaps = 3/80 (3%)
Query: 113 FFRIITPPCL--EAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFWFQK 170
FFR++ P + LP+GF +KY G+S + ++ + W + F +
Sbjct: 132 FFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEK-QWPVRCLYKAGRAKFSQ 190
Query: 171 GWKEFVKYYSLDHGHLVLFE 190
GW EF +L G + +FE
Sbjct: 191 GWYEFTLENNLGEGDVCVFE 210
>gb|AAQ89626.1| At4g01580 [Arabidopsis thaliana] gi|7268201|emb|CAB77728.1|
hypothetical protein [Arabidopsis thaliana]
gi|15234250|ref|NP_192068.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|3859591|gb|AAC72857.1| T15B16.18 gene product
[Arabidopsis thaliana] gi|51968808|dbj|BAD43096.1|
hypothetical protein [Arabidopsis thaliana]
gi|7487022|pir||T02015 hypothetical protein T15B16.18 -
Arabidopsis thaliana
Length = 190
Score = 69.7 bits (169), Expect = 2e-10
Identities = 36/111 (32%), Positives = 57/111 (50%), Gaps = 1/111 (0%)
Query: 103 NKQIPNSATR-FFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSK 161
++Q P S + FF+++ P ++ + +P F+K +S V L P I +
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKR 78
Query: 162 HDSYFWFQKGWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYP 212
WF +GW EF + +S++ GH +LFE+K S F V IF+ S E YP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129
Score = 47.4 bits (111), Expect = 0.001
Identities = 31/102 (30%), Positives = 47/102 (45%), Gaps = 6/102 (5%)
Query: 8 VQKLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQNVWEEFVKLYYLDQG 67
+ ++P F K G +S V L I + +IW W EF + + +++G
Sbjct: 43 MMRIPPRFV-KLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEG 101
Query: 68 HMVWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNS 109
H + LFE+K S F V IF+ +A E Y PL I +S
Sbjct: 102 HFL----LFEYKKNSSFRVIIFNASACETNY-PLDAVHIIDS 138
>gb|AAD43153.1| Unknown Protein [Arabidopsis thaliana] gi|51972154|gb|AAU15181.1|
At1g49480 [Arabidopsis thaliana]
gi|18402653|ref|NP_564547.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
gi|25373244|pir||E96531 hypothetical protein F13F21.8
[imported] - Arabidopsis thaliana
Length = 226
Score = 69.3 bits (168), Expect = 2e-10
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 39/212 (18%)
Query: 208 EIEYPSNENQGEEHNPDQIGDEILLP--KKTKPK-SPMSLSRPCKKLRTGKSKDVGKSPE 264
++ YPSN E N G + K++K + +P L + +K + ++V S
Sbjct: 26 KVIYPSNPESTEPVNKGYGGSTAIQSFFKESKAEETPKVLKKRGRKKKNPNPEEVNSS-- 83
Query: 265 LRKRKKVQVEGGEPSSLGPHFTAQGEARKYT-----------------PKNPSFTVSLKP 307
GG+ S F ARK T P NP F V L+P
Sbjct: 84 --------TPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRP 135
Query: 308 VIKLAYRPPV---PISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLSKGWIQF 364
YR + P F +YL+ IKL++ E WPV +Y + G K S+GW +F
Sbjct: 136 --SYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLY--KAGRAKFSQGWYEF 191
Query: 365 AKESKLVGGDVCVFELINKDEENPVLEVHIFK 396
E+ + GDVCVFEL+ + VLEV F+
Sbjct: 192 TLENNIGEGDVCVFELLR--TRDFVLEVTAFR 221
Score = 37.0 bits (84), Expect = 1.2
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 113 FFRIITPPCL--EAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFWFQK 170
+FR++ P + LP+GF +KY G+S + L+ + W + F +
Sbjct: 128 YFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEK-QWPVRCLYKAGRAKFSQ 186
Query: 171 GWKEFVKYYSLDHGHLVLFEFKDASHFGVHI 201
GW EF ++ G + +FE F + +
Sbjct: 187 GWYEFTLENNIGEGDVCVFELLRTRDFVLEV 217
>gb|AAK68808.1| Unknown protein [Arabidopsis thaliana]
Length = 226
Score = 67.4 bits (163), Expect = 8e-10
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 287 AQGEARKYTPKNPSFTVSLKPVIKLAYRPPV---PISFIREYLNEKKQTIKLKIEENLWP 343
A A+ + P NP F V L+P YR + P F +YL+ IKL++ E WP
Sbjct: 115 AVNAAKTFEPTNPYFRVVLRP--SYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWP 172
Query: 344 VEFIYYPEHGSGKLSKGWIQFAKESKLVGGDVCVFELINKDEENPVLEVHIFK 396
V +Y + G K S+GW +F E+ + GDVCVFEL+ + VLEV F+
Sbjct: 173 VRCLY--KAGRAKFSQGWYEFTLENNIGEGDVCVFELLR--TRDFVLEVTAFR 221
Score = 37.0 bits (84), Expect = 1.2
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 113 FFRIITPPCL--EAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFWFQK 170
+FR++ P + LP+GF +KY G+S + L+ + W + F +
Sbjct: 128 YFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEK-QWPVRCLYKAGRAKFSQ 186
Query: 171 GWKEFVKYYSLDHGHLVLFEFKDASHFGVHI 201
GW EF ++ G + +FE F + +
Sbjct: 187 GWYEFTLENNIGEGDVCVFELLRTRDFVLEV 217
>dbj|BAB08399.1| unnamed protein product [Arabidopsis thaliana]
gi|15238713|ref|NP_197301.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 307
Score = 65.5 bits (158), Expect = 3e-09
Identities = 65/273 (23%), Positives = 114/273 (40%), Gaps = 24/273 (8%)
Query: 128 ILPNGFMKKYSGGMSN-PVFLKAPDNTSWEIHWSKHDSYFWFQ-KGWKEFVKYYSLDHGH 185
++P+ ++ S S+ + L+ P SW++ SK+ ++ + + +GW +FV L
Sbjct: 36 MIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENE 95
Query: 186 LVLFEFKDASHFGVHIFDNSTLEIEYP-------SNENQGEEHNPDQIGDEILLPKKTKP 238
+ F + F V IF+ E+ P S N+ EE I ++ K+ +
Sbjct: 96 YLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKREERK--SIYKDV--KKEEEI 151
Query: 239 KSPMSLSRPCKKLRTGKSKDVGKSPELRKRKKVQVEGGEPSSLGPHFTAQGEARKYTPKN 298
+S S PC K S + + EL RKK + + E S + + + + +
Sbjct: 152 ESWSESSHPCHKTAESTSGRLTQKQELNLRKK-EADKTEKSKT----SKKKKVETVSNDS 206
Query: 299 PSFTVSLKPVIKLAYRPP------VPISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEH 352
+ T SL P KL + +P F+ ++ + K+ + Y
Sbjct: 207 EAGTSSLIPEFKLTIKKSHLLFLGIPKKFVDMHMPTETTMFKIHYPRGKKSWDVTYVVTD 266
Query: 353 GSGKLSKGWIQFAKESKLVGGDVCVFELINKDE 385
+ S GW + AKE L+ GDVC F+LI E
Sbjct: 267 VQSRFSGGWSRLAKELGLLVGDVCTFKLIKPTE 299
>ref|NP_683415.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 250
Score = 64.7 bits (156), Expect = 5e-09
Identities = 44/147 (29%), Positives = 71/147 (47%), Gaps = 20/147 (13%)
Query: 112 RFFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFWFQKG 171
+F +II + + +P F++ + +++ V L+ P I + WF+KG
Sbjct: 33 KFIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 91
Query: 172 WKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYP---SNENQGEEHNPDQIG- 227
W EF + +SL GH + F ++ S F V IFD S EIEYP +++N+ E + D+ G
Sbjct: 92 WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGF 151
Query: 228 ---------------DEILLPKKTKPK 239
DE+L KK KP+
Sbjct: 152 TGFESSDDDGEVVDMDELLKKKKKKPR 178
Score = 47.4 bits (111), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (48%), Gaps = 6/91 (6%)
Query: 8 VQKLPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQNVWEEFVKLYYLDQG 67
+ K+P F R G +++ V L+ I + ++W + W EF + + L G
Sbjct: 47 MMKVPARFVR--FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDG 104
Query: 68 HMVWHLVLFEFKGPSKFEVCIFDKNALEIKY 98
H ++ F ++G S F V IFD +A EI+Y
Sbjct: 105 HFLF----FHYEGDSCFRVVIFDVSASEIEY 131
>gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 363
Score = 63.9 bits (154), Expect = 9e-09
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 291 ARKYTPKNP-SFTVSLKPVIKLAYRPPVPISFIREYLNEKKQTIKL-KIEENLWPVEFIY 348
AR++ KNP + + ++ + + + +P F+RE L + I L + W V ++Y
Sbjct: 245 AREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVY 304
Query: 349 YPEHGSGKLSKGWIQFAKESKLVGGDVCVFELINKDEENPVLEVHIFK 396
Y + G S GW +FA + L DVCVFEL+ KD ++VHI++
Sbjct: 305 YSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDN----IKVHIYR 348
Score = 42.4 bits (98), Expect = 0.029
Identities = 21/80 (26%), Positives = 36/80 (44%)
Query: 129 LPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFWFQKGWKEFVKYYSLDHGHLVL 188
+P+ F + + V L W + F+F GWKEFV+ S+ G ++
Sbjct: 4 IPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLV 63
Query: 189 FEFKDASHFGVHIFDNSTLE 208
F + S F V +F+ S ++
Sbjct: 64 FTYDKRSQFSVTVFEPSGID 83
>gb|AAD26962.1| hypothetical protein [Arabidopsis thaliana] gi|25363526|pir||H84537
hypothetical protein At2g16210 [imported] - Arabidopsis
thaliana
Length = 286
Score = 62.0 bits (149), Expect = 4e-08
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 24/262 (9%)
Query: 129 LPNGFMKKYSGG-MSNPVFLKAPDNTSWEIHWSKHDSYFWFQK-GWKEFVKYYSLDHGHL 186
LP+ F + ++ +S + ++A SWE+ SK+ +++ +K GW++FV+ +L + L
Sbjct: 36 LPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNSEL 95
Query: 187 VLFEFKDASHFGVHIFDNSTLEIEYPSNENQ---GEEHNPDQIGDEILLPKKTKPKSPMS 243
+ F K HF V+IF E+ P + + I +E+++ + ++ +
Sbjct: 96 LTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSKQEENDIKEEVVV-SSNRGQTTAA 154
Query: 244 LSRPCKKLRTGKSKDVGKSPELRKRKKVQVEGGEPSSLGPHFTAQGEARKYTPKNPSFTV 303
S+ +KL GK K + KR + V + TA +FT+
Sbjct: 155 ESKG-RKLNLGKR--AAKESQSSKRTEKVVRARSDYAGASSSTA-----------AAFTI 200
Query: 304 SLKPVIKLAYRPPVPISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLSKGWIQ 363
K + R +P S ++ + ++K K+ +Y G+ S GW +
Sbjct: 201 LFKQGYLVFLR--IPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGA--FSGGWRR 256
Query: 364 FAKESKLVGGDVCVFELINKDE 385
KE L GD C F I E
Sbjct: 257 VVKEYPLAVGDTCKFTFIKPKE 278
Score = 36.6 bits (83), Expect = 1.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 11 LPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQ-NVWEEFVKLYYLDQGHM 69
LP+ F+R ++ +S + ++ SWE+ SK +++ + WE+FV+ L
Sbjct: 36 LPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNS-- 93
Query: 70 VWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNS 109
L+ F KG F V IF + E+ P S +S
Sbjct: 94 --ELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASS 131
>gb|AAX23816.1| hypothetical protein At2g16210 [Arabidopsis thaliana]
gi|42569068|ref|NP_179217.2| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 291
Score = 61.6 bits (148), Expect = 5e-08
Identities = 63/267 (23%), Positives = 113/267 (41%), Gaps = 29/267 (10%)
Query: 129 LPNGFMKKYSGG-MSNPVFLKAPDNTSWEIHWSKHDSYFWFQK-GWKEFVKYYSLDHGHL 186
LP+ F + ++ +S + ++A SWE+ SK+ +++ +K GW++FV+ +L + L
Sbjct: 36 LPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNSEL 95
Query: 187 VLFEFKDASHFGVHIFDNSTLEIEYP--------SNENQGEEHNPDQIGDEILLPKKTKP 238
+ F K HF V+IF E+ P S+ E + I +E+++ +
Sbjct: 96 LTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKEEVVV-SSNRG 154
Query: 239 KSPMSLSRPCKKLRTGKSKDVGKSPELRKRKKVQVEGGEPSSLGPHFTAQGEARKYTPKN 298
++ + S+ +KL GK K + KR + V + TA
Sbjct: 155 QTTAAESKG-RKLNLGKR--AAKESQSSKRTEKVVRARSDYAGASSSTA----------- 200
Query: 299 PSFTVSLKPVIKLAYRPPVPISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLS 358
+FT+ K + R +P S ++ + ++K K+ +Y G+ S
Sbjct: 201 AAFTILFKQGYLVFLR--IPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGA--FS 256
Query: 359 KGWIQFAKESKLVGGDVCVFELINKDE 385
GW + KE L GD C F I E
Sbjct: 257 GGWRRVVKEYPLAVGDTCKFTFIKPKE 283
Score = 37.0 bits (84), Expect = 1.2
Identities = 27/101 (26%), Positives = 47/101 (45%), Gaps = 5/101 (4%)
Query: 11 LPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQ-NVWEEFVKLYYLDQGHM 69
LP+ F+R ++ +S + ++ SWE+ SK +++ + WE+FV+ L
Sbjct: 36 LPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNS-- 93
Query: 70 VWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNSA 110
L+ F KG F V IF + E+ P S +S+
Sbjct: 94 --ELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSS 132
>dbj|BAA94979.1| unnamed protein product [Arabidopsis thaliana]
gi|15228937|ref|NP_188326.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 302
Score = 60.1 bits (144), Expect = 1e-07
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 52/294 (17%)
Query: 113 FFRI-----ITPPCLEAAELILPNGFMKKYSG-GMSNPVFLKAPDNTSWEIHWSKHDSYF 166
FF+I ++ C+ A LP F+ K S S + ++A +W++ SK+ +Y+
Sbjct: 21 FFKIFQRADLSSDCMRA----LPYSFISKVSEKDFSYKMVIRAQWGKTWDVEVSKNPTYY 76
Query: 167 WFQ-KGWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYPSN-ENQGEEHN-P 223
+ + +GW FV +L + F + F V+I++ + LE+ P + G
Sbjct: 77 YIETRGWDLFVSDNALGQNEFITFTHRGNMVFHVNIYEQNGLEMRKPRKFQTMGPSSGIK 136
Query: 224 DQIGDEILLPKKTKPKSPMSLSRPCKKLRTGKSKDVGKSPELRKRKKVQVEGGEPSSLGP 283
+ G+ L+ K + +S S R +R K++D S + R KV+ +
Sbjct: 137 KEEGENSLIDVKKEEESDESPGRAEFLVRKKKTEDSKSSKKKMTRNKVKKK--------- 187
Query: 284 HFTAQGEARKYTPKNPSFTVSL-KPVIKLAYRPPVPISFIREYLNEKKQTIKLKIEENLW 342
++ ++++ P F +++ K +K +P F+ +++ K + ++
Sbjct: 188 ---SKSKSKQVLDGVPEFKITIRKSYLKFL---AIPKHFVDDHIPNKSKIFTIR------ 235
Query: 343 PVEFIYYPEHGSGKL-----------SKGWIQFAKESKLVGGDVCVFELINKDE 385
+P GS K+ S G+ + A+E L+ GD C F+LI E
Sbjct: 236 ------HPNGGSWKVLCLVREIRTIFSGGYSKLAREFPLMVGDKCTFKLIKPFE 283
>dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana]
gi|15240157|ref|NP_201499.1| transcriptional factor B3
family protein [Arabidopsis thaliana]
Length = 334
Score = 58.9 bits (141), Expect = 3e-07
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 33/297 (11%)
Query: 112 RFFRIITPPCLEAAELILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSY----FW 167
+FF++ P + EL++P F+ + FL W + D+ +
Sbjct: 9 QFFKVFLPE-FGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVF 67
Query: 168 FQKGWKEFVKYYSLDHGHLVLFEFKDASHFGVHIF--DNSTLEIEYPSNENQGEEHNPDQ 225
F KGW+ F SL+ G ++F + S F V IF D ++ S ++ ++
Sbjct: 68 FTKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSLDEE 127
Query: 226 IGDEILLPKKTKPKSPMSLSRPCKKLRTGKSKD----VGKSPELRKRKKVQVEGGEPS-- 279
D+I S K+ R ++D V PE K + E E +
Sbjct: 128 EPDDIFTKPDRMRDCDCGQSINRKRKRDSVNEDPHVLVDDKPEYVSTYKTKPEHSEKTQR 187
Query: 280 -----------SLGPHFTAQG-EARKYTPKNPSFT--VSLKPVIKLAYRPPVPISFIREY 325
S P G E Y PK+P F ++ + KL +P++F+R
Sbjct: 188 TVNRAGDTCDISWFPEKKHNGFEESVYKPKHPHFVRNITRGSLQKLE----LPLTFLRSN 243
Query: 326 LNEKKQTIKLKIEENL-WPVEFIYYPEHGSGKLSKGWIQFAKESKLVGGDVCVFELI 381
E ++ I+L E WP++ + + + G + W+ F K +++ + C+FE I
Sbjct: 244 GIELEEDIELCDESGKKWPLKILNH-DRGFKFSHESWLCFCKSHEMILTNKCLFEFI 299
>gb|AAM67335.1| unknown [Arabidopsis thaliana] gi|9758891|dbj|BAB09467.1| unnamed
protein product [Arabidopsis thaliana]
gi|28973297|gb|AAO63973.1| unknown protein [Arabidopsis
thaliana] gi|28393402|gb|AAO42124.1| unknown protein
[Arabidopsis thaliana] gi|15238737|ref|NP_197310.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana]
Length = 301
Score = 58.5 bits (140), Expect = 4e-07
Identities = 69/290 (23%), Positives = 122/290 (41%), Gaps = 30/290 (10%)
Query: 113 FFRIITPPCLEAAELI--LPNGFMKKYSGG-MSNPVFLKAPDNTSWEIHWSKHDS-YFWF 168
FF+I+ L ++E++ +P F+K S +S + LK +SW I ++ S YF
Sbjct: 18 FFKILRSADL-SSEIMRGIPLNFIKSISEEELSAKMLLKVSWGSSWPIKICRNPSFYFME 76
Query: 169 QKGWKEFVKYYSLDHGHLVLFEFKDASHFGVHIFDNSTLEIEYP---------SNENQGE 219
+KGW +F+ L + + F + F V I+ E+ P S N+ E
Sbjct: 77 KKGWDQFLSDNGLGNDEFLTFTHQGNMCFTVDIYQIDGKELLTPRRSATIASSSGRNKRE 136
Query: 220 EHNP--DQIGDEILLPKKTKPKSP--MSLSRPCKKLRTGKSKDVGKSPELRKRKKVQVEG 275
+ N + +E + ++ P + ++ R S K E K+KK++VE
Sbjct: 137 QRNNIYKDVKEEEDIESWSESSYPGHKTAESTGRRQRLSLSNKKAKETEKSKKKKMKVES 196
Query: 276 GEPSSLGPHFTAQGEARKYTPKNPSFTVSLKPVIKLAYRPPVPISFIREYLNEKKQTIKL 335
+ +Q ++ P+ FT+++K + +P F ++ + K+
Sbjct: 197 IS-------YDSQDDSLSLVPE---FTLTIKKSYLIFLG--IPKMFEELHMPTEATMFKI 244
Query: 336 KIEENLWPVEFIYYPEHGSGKLSKGWIQFAKESKLVGGDVCVFELINKDE 385
E + +Y + + GWI+ AKE L GDVC F LI E
Sbjct: 245 HDPEGKRSWDVMYKFSNNQTRFCAGWIRLAKELGLEIGDVCTFTLIKPTE 294
>gb|AAO89204.1| hypothetical protein [Arabidopsis thaliana]
Length = 291
Score = 58.2 bits (139), Expect = 5e-07
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 29/267 (10%)
Query: 129 LPNGFMKKYSGG-MSNPVFLKAPDNTSWEIHWSKHDSYFWFQK-GWKEFVKYYSLDHGHL 186
LP+ F + ++ +S + ++A SWE+ SK+ +++ +K GW++FV+ +L + L
Sbjct: 36 LPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNSEL 95
Query: 187 VLFEFKDASHFGVHIFDNSTLEIEYP--------SNENQGEEHNPDQIGDEILLPKKTKP 238
+ F K F V+IF E+ P S+ E + I +E+++ +
Sbjct: 96 LTFTHKGKMXFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKEEVVV-SSNRG 154
Query: 239 KSPMSLSRPCKKLRTGKSKDVGKSPELRKRKKVQVEGGEPSSLGPHFTAQGEARKYTPKN 298
++ + S+ +KL GK K + KR + V + TA
Sbjct: 155 QTTAAESKG-RKLNLGKR--AAKESQSSKRTEKVVRARSDYAGASSSTA----------- 200
Query: 299 PSFTVSLKPVIKLAYRPPVPISFIREYLNEKKQTIKLKIEENLWPVEFIYYPEHGSGKLS 358
+FT+ K + R +P S ++ + ++K K+ +Y G+ S
Sbjct: 201 AAFTILFKQGYLVFLR--IPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGA--FS 256
Query: 359 KGWIQFAKESKLVGGDVCVFELINKDE 385
GW + KE L GD C F I E
Sbjct: 257 GGWRRVVKEYPLAVGDTCKFTFIKPKE 283
Score = 37.0 bits (84), Expect = 1.2
Identities = 27/101 (26%), Positives = 47/101 (45%), Gaps = 5/101 (4%)
Query: 11 LPNAFTRKYSGDNMSNPVFLKPLDNISWEINWSKQDSDIWLQ-NVWEEFVKLYYLDQGHM 69
LP+ F+R ++ +S + ++ SWE+ SK +++ + WE+FV+ L
Sbjct: 36 LPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNS-- 93
Query: 70 VWHLVLFEFKGPSKFEVCIFDKNALEIKYLPLSNKQIPNSA 110
L+ F KG F V IF + E+ P S +S+
Sbjct: 94 --ELLTFTHKGKMXFTVNIFKLDGKEMMQPPQSRSFFASSS 132
>emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana]
gi|4490295|emb|CAB38786.1| hypothetical protein
[Arabidopsis thaliana] gi|15234131|ref|NP_195054.1|
transcriptional factor B3 family protein [Arabidopsis
thaliana] gi|7485659|pir||T05979 hypothetical protein
F17M5.40 - Arabidopsis thaliana
Length = 461
Score = 57.0 bits (136), Expect = 1e-06
Identities = 24/68 (35%), Positives = 43/68 (62%)
Query: 330 KQTIKLKIEENLWPVEFIYYPEHGSGKLSKGWIQFAKESKLVGGDVCVFELINKDEENPV 389
+Q + +++++ W ++F + GSG +S GW +F +++ L GDVCVFE N + +
Sbjct: 377 RQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLH 436
Query: 390 LEVHIFKG 397
L V+IF+G
Sbjct: 437 LNVYIFRG 444
Score = 46.2 bits (108), Expect = 0.002
Identities = 25/81 (30%), Positives = 41/81 (49%), Gaps = 1/81 (1%)
Query: 128 ILPNGFMKKYSGGMSNPVFLKAPDNTSWEIHWSKHDSYFW-FQKGWKEFVKYYSLDHGHL 186
++P F + V LK+P ++ + + D F+ GW +FVK +SL+ L
Sbjct: 107 VIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDL 166
Query: 187 VLFEFKDASHFGVHIFDNSTL 207
++F+F S F V +FD TL
Sbjct: 167 LVFKFHGVSEFEVLVFDGQTL 187
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 843,752,109
Number of Sequences: 2540612
Number of extensions: 39295337
Number of successful extensions: 81711
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 81427
Number of HSP's gapped (non-prelim): 293
length of query: 441
length of database: 863,360,394
effective HSP length: 131
effective length of query: 310
effective length of database: 530,540,222
effective search space: 164467468820
effective search space used: 164467468820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)
Lotus: description of TM0040.3