BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0039.4
(1435 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_473979.1| OSJNBb0060E08.21 [Oryza sativa (japonica cultiv... 1314 0.0
ref|XP_474453.1| OSJNBa0039K24.13 [Oryza sativa (japonica cultiv... 1314 0.0
gb|AAP52378.1| putative retroelement [Oryza sativa (japonica cul... 1306 0.0
ref|NP_914274.1| putative polyprotein [Oryza sativa (japonica cu... 1305 0.0
emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa (japonica cultivar... 1303 0.0
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa (japonica cultivar... 1302 0.0
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa (japonica cultivar... 1298 0.0
gb|AAP53838.1| putative gag-pol protein [Oryza sativa (japonica ... 1295 0.0
gb|AAP52384.1| putative retroelement [Oryza sativa (japonica cul... 1294 0.0
gb|AAP52480.1| putative polyprotein [Oryza sativa (japonica cult... 1293 0.0
gb|AAP52586.1| putative polyprotein [Oryza sativa (japonica cult... 1291 0.0
emb|CAE75877.1| B1234D02.1 [Oryza sativa (japonica cultivar-grou... 1291 0.0
emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa (japonica cultivar... 1291 0.0
ref|XP_475750.1| putative polyprotein [Oryza sativa (japonica cu... 1290 0.0
ref|XP_493959.1| Similar to Sorghum bicolor 22 kDa kafirin clust... 1290 0.0
emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa (japonica cultivar... 1289 0.0
ref|NP_917371.1| Putative polyprotein [Oryza sativa (japonica cu... 1288 0.0
gb|AAP53008.1| putative polyprotein [Oryza sativa (japonica cult... 1288 0.0
ref|XP_476280.1| putative polyprotein [Oryza sativa (japonica cu... 1288 0.0
ref|NP_908336.1| putative polyprotein [Oryza sativa (japonica cu... 1288 0.0
>ref|XP_473979.1| OSJNBb0060E08.21 [Oryza sativa (japonica cultivar-group)]
gi|32489661|emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa
(japonica cultivar-group)] gi|57834090|emb|CAE04759.2|
OSJNBb0060E08.22 [Oryza sativa (japonica cultivar-group)]
Length = 1851
Score = 1314 bits (3401), Expect = 0.0
Identities = 678/1472 (46%), Positives = 939/1472 (63%), Gaps = 50/1472 (3%)
Query: 2 LRQLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQI 61
L+ LT +A+ A P + + FL+ PP F +P A+ WL+ +++
Sbjct: 389 LQGLTTAIASFQHNAHGNGHPHVGNNRSKLTDFLRSRPPEFSQTIEPVEADDWLKDVDRK 448
Query: 62 YESLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVK 121
+ + YAS+ A +WW + + P + W F AF + P
Sbjct: 449 LNLVQCTPVEKTLYASHQLRGPAADWWENYCNAHPEPTNI-AWDEFATAFRVAHVPESTI 507
Query: 122 GKKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIG 181
K+ EF LKQG V +Y ++F +L+++ P T D K +F G+ +R +
Sbjct: 508 DMKKEEFNRLKQGHSSVNEYLSQFNKLARYAPEEVDT--DKKKIRKFLKGIAVGMRLQLL 565
Query: 182 HQQIRTFTVLVEKCRIFEENDRARREYYKSSKFNKT--------------------SKRR 221
TF ++ K + E+ + E YK K N S +
Sbjct: 566 AHDFPTFQHMINKALLLEDARKEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQ 625
Query: 222 EERKKPYSPRNYK-----PELQNRNYGGARPTNPNSH--------VTCYRCGKEGHKSWS 268
R+ Y+PR P Q G P + S V C+RC + GH +
Sbjct: 626 ANRQSSYAPRPQMNRPAPPPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYARQ 685
Query: 269 CTATTTSGQTNLKPPVVGGTNTTSA----PRNSAGASAQKPGRPVNKGKVFAMTGAEANT 324
C T+ T T +A P + A + +G+V + A
Sbjct: 686 CPQNPTNTSPGHANGSTARTPTPAAAQSRPSSQASGQGSRASNHFGRGRVNHIQAETAQD 745
Query: 325 SEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVT 384
+ D + G + + +VL+DSGA+HSFIS K L ++V +P + T
Sbjct: 746 APDVVMGMFSVNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRAT 805
Query: 385 SSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEK 444
+C + L IE+ ++ + L + LDIILGM+WL+ + +DC + I LQ K
Sbjct: 806 Q-ICPEVNLRIEEVNFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEK-SITLQGPGGK 863
Query: 445 HTASLPEKEPSAYLILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVI 504
P ++ IL + T ++E +P+V E+P+VFPE++T +PP+RE+EFAI++
Sbjct: 864 QVRFTPNTPTASRSILTCLQVT---SLESVPIVCEYPDVFPEELTRMPPDREIEFAIELA 920
Query: 505 PGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVD 564
PGT PI+ PYR++ ELAE+++Q+EEL SKG++RPS SPWGAPVLLVKKKDGS R+ +D
Sbjct: 921 PGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVID 980
Query: 565 YRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYG 624
YR LN+VTIKN+YPLPRIDDL DQLKGARVFSKIDLRSGYHQ++++S+D+ KTAF TRYG
Sbjct: 981 YRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIPKTAFSTRYG 1040
Query: 625 HYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLK 684
YE+ VM FG+TNAPA FM+ MN+IF YLD+FV+VFIDDILIYSK++EEH EH++++++
Sbjct: 1041 LYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKNEEEHAEHLRLIME 1100
Query: 685 VLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLG 744
L+D +L+AK SKCEFWL++V FLGHV+S +G+ VDP+KVEAV +W P+ V+ +RSFLG
Sbjct: 1101 KLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLG 1160
Query: 745 LAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKD 804
LAGYYRRFIEGFSK+A P+T+L KK+ F W+ CE SFQ +K+RLT APVLTLPD KD
Sbjct: 1161 LAGYYRRFIEGFSKLARPMTELLKKEKKFQWSTACEDSFQEMKKRLTTAPVLTLPDIRKD 1220
Query: 805 YDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYG 864
++++CDAS+ GLGCVLMQERKV+AYAS+QLRPHE NYPTHD+ELAAV+ ALKIWRHYL G
Sbjct: 1221 FEIFCDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVIHALKIWRHYLIG 1280
Query: 865 VKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LH 923
+ +Y+DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVVADALSRK+ +
Sbjct: 1281 NRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCN 1340
Query: 924 AARLMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHG 983
A++ ++ L + + L T+ Q +LT+ ++++ Q DE +++
Sbjct: 1341 IAQIRPDQDHLCRELEKLRL---TVVQSGVPASLTVQPTLESQIREAQKDDEGIKELIKR 1397
Query: 984 RDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKM 1043
+F G R+CVP ELR IL+E H+S +SIHPG+TKMYQD+K
Sbjct: 1398 IQEKKDTNFSIDDQGTIWCGPRICVPAKKELRNLILKEAHESAYSIHPGSTKMYQDIKAY 1457
Query: 1044 FWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTT 1103
FWW GMK+D+ + V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT +
Sbjct: 1458 FWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPS 1517
Query: 1104 GHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKF 1163
G+D+IWVIVDRLTKSAHF+ V T+ +KLA +Y+ +V G P IVSDR +F S+F
Sbjct: 1518 GYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAELYMTHVVCRFGCPKKIVSDRGTQFTSRF 1577
Query: 1164 WGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYN 1223
W LHEALGT L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD++G+W+ LP AEFSYN
Sbjct: 1578 WKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLRACALDFEGTWDRCLPYAEFSYN 1637
Query: 1224 NSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDR 1283
NSY +S+ M+P EA++GRRC+TPLCW + + GP++L+ E+V+ IRE+LR AQ+R
Sbjct: 1638 NSYQASIQMSPNEAMFGRRCRTPLCWNEVGEALVFGPDILKSAEEQVKLIRERLRTAQNR 1697
Query: 1284 QKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRI 1343
QK+Y D R + LEF++GDHV+LRV+P+ G+ R S KL P+Y+GPY I R G VAY++
Sbjct: 1698 QKNYADNRRRDLEFEKGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGEVAYQL 1757
Query: 1344 ALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKR 1403
LP L+++H+VFH+SQL+K L + NIELE+NLTY +P+K+LE E+Q R++
Sbjct: 1758 ELPEGLADVHNVFHVSQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAERQTRRK 1817
Query: 1404 TVPLVKLAWSDDNQD-ATWELEESARKRYPSL 1434
T+ K+ WS+ ++D ATWE E+ R +P L
Sbjct: 1818 TIKFYKVQWSNHSEDEATWEREDLLRAEFPEL 1849
>ref|XP_474453.1| OSJNBa0039K24.13 [Oryza sativa (japonica cultivar-group)]
gi|38345510|emb|CAE01794.2| OSJNBa0039K24.13 [Oryza
sativa (japonica cultivar-group)]
Length = 1851
Score = 1314 bits (3400), Expect = 0.0
Identities = 685/1478 (46%), Positives = 947/1478 (63%), Gaps = 62/1478 (4%)
Query: 2 LRQLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQI 61
L+ LT +A+ A P + + FL+ PP F +P A+ WL+ +++
Sbjct: 389 LQGLTTAIASFQHNAHGNGHPHVGNNRSKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRK 448
Query: 62 YESLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVK 121
+ + YAS+ A +WW + + P + W F AF + P
Sbjct: 449 LNLVQCTPVEKTLYASHQLRGPAADWWENYCNAHPEPTNI-AWDEFATAFRAAHVPESTI 507
Query: 122 GKKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIG 181
K+ EF LKQG V +Y ++F +L+++ P T D K +F G+ +R +
Sbjct: 508 DMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEVDT--DKKKIRKFLKGIAVGMRLQLL 565
Query: 182 HQQIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKP-------------- 227
TF ++ K + E+ + E YK K N +P
Sbjct: 566 AHDFPTFHHMINKALLLEDARKEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQ 625
Query: 228 ------YSPRNY--KPELQNRNYGGARPTNPNS-----------HVTCYRCGKEGHKSWS 268
Y+PR +P Q + + T PNS V C+RC + GH +
Sbjct: 626 ANHQPGYAPRPQMNRPAPQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYARQ 685
Query: 269 CT---ATTTSGQTNLKPPVVGGTNTTSAP-----RNSAGASAQ--KPGRPVNKGKVFAMT 318
C T SG N G T T AP R S+ AS Q + +G+V +
Sbjct: 686 CPQNPTNTNSGHAN------GSTARTPAPAAAQSRPSSQASGQGSRASNHFGRGRVNHIQ 739
Query: 319 GAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPT 378
A + D + G + + +VL+DSGA+HSFIS K L ++V +P
Sbjct: 740 AEIAQDAPDVVMGMFSVNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPG 799
Query: 379 KESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFL 438
+ T +C + L IE+ +++ + L + LDIILGM+WL+ + +DC + I L
Sbjct: 800 RNIRATQ-ICPEVNLRIEEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEK-SITL 857
Query: 439 QKYKEKHTASLPEKEPSAYLILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVE 498
Q K P ++ IL + T ++E +P+V E+P+VFPE++T +PP+RE+E
Sbjct: 858 QGPGGKQVRFTPNTPTASRSILTCLQVT---SLESVPIVCEYPDVFPEELTRMPPDREIE 914
Query: 499 FAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGS 558
FAI++ PGT PI+ PYR++ ELAE+++Q+EEL SKG++RPS SPWGAPVLLVKKKDGS
Sbjct: 915 FAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGS 974
Query: 559 MRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTA 618
R+ +DYR LN+VTIKN+YPLPRIDDL DQLKGARVFSKIDLRSGYHQ++++S+D+ KTA
Sbjct: 975 ERMVIDYRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIPKTA 1034
Query: 619 FRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEH 678
F TRYG YE+ VM FG+TNAPA FM+ MN+IF YLD+FV+VFIDDILIYSK++EEH EH
Sbjct: 1035 FSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKNEEEHAEH 1094
Query: 679 MQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTG 738
++++++ L+D +L+AK SKCEFWL++V FLGHV+S +G+ VDP+KVEAV +W P+ V+
Sbjct: 1095 LRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISPNGVEVDPSKVEAVLAWNPPKNVSE 1154
Query: 739 VRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTL 798
+RSFLGLAGYYRRFIEGFSK+A P+T+L KK+ F W+ CE SFQ +K+RLT APVLTL
Sbjct: 1155 IRSFLGLAGYYRRFIEGFSKLARPMTELLKKEKKFQWSVACEDSFQEMKKRLTTAPVLTL 1214
Query: 799 PDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIW 858
PD KD++++CDAS+ GLGCVLMQERKV+AYAS+QLRPHE NYPTHD+ELAAVV ALKIW
Sbjct: 1215 PDIRKDFEIFCDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIW 1274
Query: 859 RHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALS 918
RHYL G + +Y+DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVVADALS
Sbjct: 1275 RHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALS 1334
Query: 919 RKS-LHAARLMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENL 977
RK+ + A++ ++ L + + L T+ Q +LT+ ++++ Q DE +
Sbjct: 1335 RKAYCNVAQIRPDQDHLCRELEKLRL---TVVQSGVPASLTVQPTLESQIREAQKDDEGI 1391
Query: 978 QKEAHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMY 1037
++ +F G R+CVP ELR IL+E H+S +SIHPG+TKMY
Sbjct: 1392 KELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMY 1451
Query: 1038 QDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSG 1097
QD+K FWW GMK+D+ + V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++G
Sbjct: 1452 QDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITG 1511
Query: 1098 LPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDP 1157
LPRT +G+D+IWVIVDRLTKSAHF+ V T+ +KLA +Y+ +V G P IVSDR
Sbjct: 1512 LPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAELYMTHVVCRFGCPKKIVSDRGT 1571
Query: 1158 RFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPL 1217
+F S+FW LHEALGT L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD++G+W+ LP
Sbjct: 1572 QFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLRACALDFEGTWDRCLPY 1631
Query: 1218 AEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKL 1277
AEFSYNNSY +S+ M+P EA++GR+C+TPLCW + + GP++L+ E+V+ IRE+L
Sbjct: 1632 AEFSYNNSYQASIQMSPNEAMFGRKCRTPLCWDEVGEALVFGPDILKSAEEQVKLIRERL 1691
Query: 1278 RIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIG 1337
+ AQ+RQK+Y D R + LEF++GDHV+LRV+P+ G+ R S KL P+Y+GPY I R G
Sbjct: 1692 KTAQNRQKNYADNRRRDLEFEKGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRG 1751
Query: 1338 AVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERRE 1397
VAY++ LP L+++H+VFH+SQL+K L + NIELE+NLTY +P+K+LE E
Sbjct: 1752 EVAYQLELPEGLADVHNVFHVSQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAE 1811
Query: 1398 KQLRKRTVPLVKLAWSDDNQD-ATWELEESARKRYPSL 1434
+Q R++T+ K+ WS+ ++D ATWE E+ R +P L
Sbjct: 1812 RQTRRKTIKFYKVQWSNHSEDEATWEREDLLRAEFPDL 1849
>gb|AAP52378.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531578|ref|NP_920091.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1461
Score = 1306 bits (3381), Expect = 0.0
Identities = 685/1460 (46%), Positives = 933/1460 (62%), Gaps = 72/1460 (4%)
Query: 4 QLTNFLANQAARAE--QQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQI 61
QL N L QA + QNQ + FL+ PP F +P A WL +E+
Sbjct: 34 QLINLLVQQAQNQQGNNQNQNPPPPPQNKLADFLRVRPPTFSSTTNPVEAGDWLHAVEKK 93
Query: 62 YESLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVK 121
+ + +E +++AS+ H A WW H + + + TW F AF + + P+ V
Sbjct: 94 LDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQGRAGGEPI-TWQEFTAAFKKTHIPSGVV 152
Query: 122 GKKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIG 181
K+ EF L QG V +Y F L+ + P T ++ + +F GL ++ A+
Sbjct: 153 ALKKREFRALNQGSRSVTKYLHDFNRLACYAPEDVCTDEERQE--KFLEGLNDELSYALM 210
Query: 182 HQQIRTFTVLVEKCRIFEEND-----------------------RARREYYKSSKFNKTS 218
R F LV+K E+N+ R +R++Y ++ N+ +
Sbjct: 211 STDFRDFQQLVDKAIRQEDNNQRPRLVTGPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGN 270
Query: 219 KRREERKKPYS-PRNYKPELQNRNYGGARPTNPNSHVTCYRCGKEGHKSWSCTATTTSGQ 277
R +P + P +P R G++P V C+ CG GH + C
Sbjct: 271 DNRNVVARPAATPVQNQPV---RREQGSKP------VICFNCGDPGHYADKCP------- 314
Query: 278 TNLKPPVVGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAMTGAEANTSEDFIQGTCFLCD 337
KP V AP N P K +V + AEA + D + GT +
Sbjct: 315 ---KPRRV---KNAPAPNNF--------NVPAPKARVNHVAAAEAQNAPDVVLGTFPVNS 360
Query: 338 ISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIED 397
I VL+DSGATHSF+S A + + L L+V TP + A ++ C + IE+
Sbjct: 361 IPATVLFDSGATHSFLSKSFAIKHGMEVVSLGRPLLVNTPGNQ-AFSTRYCPSVTIEIEE 419
Query: 398 REYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPEKEPSAY 457
+ ++L+ L + LD+ILGM+WLS + ++DC R E T S P ++
Sbjct: 420 VPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGE--TVSFFASSPKSH 477
Query: 458 LILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTTPISAAPYRI 517
E + A+++IP+V+++P+VFPED+ +PP+R++EF ID++PGT PI PYR+
Sbjct: 478 -----GEVLNQVALQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRM 532
Query: 518 SPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKNRY 577
+ ELAE++KQV++LL KG+IRPS SPWGAPV+ V+KKD + R+CVDYR LN+VTIKN+Y
Sbjct: 533 AANELAEVKKQVDDLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKY 592
Query: 578 PLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVMPFGVTN 637
PLPRIDDL DQL+GA VFSKIDLRSGYHQ+R++ +D+ KTAF TRYG +E VM FG+TN
Sbjct: 593 PLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTN 652
Query: 638 APAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKLYAKLSK 697
APA FM+ MN++F YLDKFV+VFIDDILIYSK+KEEH EH+++ L+ L++ +LYAK SK
Sbjct: 653 APAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSK 712
Query: 698 CEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRRFIEGFS 757
CEFWL +V+FLGHV+S G+AVDP+ VE+V SWK P+TV+ +RSFLGLAGYYRRFIE FS
Sbjct: 713 CEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFS 772
Query: 758 KIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDASKSGLG 817
KIA P+T+L +KD + WTE CE SFQ LK+RL APVL LPD K + VYCDAS+ GLG
Sbjct: 773 KIARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRHGLG 832
Query: 818 CVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYSDHQSLK 877
CVLMQE KV+AYAS+QL PHE NYPTHD+ELAAVV ALKIWRHYL+G + IY+DH+SLK
Sbjct: 833 CVLMQEGKVVAYASRQLCPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEIYTDHKSLK 892
Query: 878 YLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAARLMIEETELIE 936
Y+F Q LNMRQRRW+E ++DYD ++ YHPGKANVVADALSRKS + + EL +
Sbjct: 893 YIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQ 952
Query: 937 KFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRPDFLKGP 996
+F +NL + + TL +++++ Q D ++Q+ F++
Sbjct: 953 EFERLNL---GIVSKGFVATLEAKPTLFDQIREAQMNDPDIQEIKKNMRRGKAIGFVEDE 1009
Query: 997 DGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKK 1056
G R+CVPE EL+ I++E H++ +SIHPG+TKMYQDLK FWW M+++I +
Sbjct: 1010 QGTVWLGERICVPENKELKNTIMKEAHETLYSIHPGSTKMYQDLKLQFWWASMRREIAEY 1069
Query: 1057 VTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLT 1116
V C CQ+VK EHQKP+G LQPL IPEWKWE I MDF++GLPRT+ GHD+IWV+VDRLT
Sbjct: 1070 VALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLT 1129
Query: 1117 KSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEALGTRLS 1176
K A FI + T+ KLA +Y+ +V LHGVP IVSDR +F SKFW L LGTRL+
Sbjct: 1130 KVAQFIPIKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLN 1189
Query: 1177 LSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFE 1236
S+AYHPQ+DGQ+ER Q LEDMLRACVLD+ GSW+ LP AEFSYNNSY +SL M+P E
Sbjct: 1190 FSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMSPNE 1249
Query: 1237 ALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLE 1296
ALYGR+C+TPL W ++ G ++L+E EK++ I+E+LR+AQ RQKSY D R + L
Sbjct: 1250 ALYGRKCRTPLLWDQTGERQVFGTDILREAEEKMKIIQERLRVAQSRQKSYADNRRRDLA 1309
Query: 1297 FQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLSNLHDVF 1356
F+EGD+V+LRVTP+ GV R KL P+++GP++I+ R G VAY++ LPPS++ +HDVF
Sbjct: 1310 FEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVF 1369
Query: 1357 HISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLVKLAWSD-D 1415
H+SQL+K L + +P IEL+E+LTY +PV+ILE E+ R R + K+ WS+
Sbjct: 1370 HVSQLKKCLRVPTEEADPGRIELQEDLTYVEKPVRILEVSERNTRNRVIRFCKVQWSNHS 1429
Query: 1416 NQDATWELEESARKRYPSLF 1435
+++TWE E+ + +P LF
Sbjct: 1430 EEESTWEREDELKSAHPHLF 1449
>ref|NP_914274.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1572
Score = 1305 bits (3377), Expect = 0.0
Identities = 672/1472 (45%), Positives = 943/1472 (63%), Gaps = 50/1472 (3%)
Query: 2 LRQLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQI 61
L+ LT +A+ A P + + FL+ PP F +P A+ WL+ +++
Sbjct: 110 LQGLTTAIASFQHNAHGNGHPHMGNNRSKLTDFLRSRPPEFSQTVEPVEADDWLKDVDRK 169
Query: 62 YESLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVK 121
+ + + YAS+ A +WW + + P + W F AF + P
Sbjct: 170 LNLVQCTPVEKMLYASHQLRGPAADWWENYCNAHPEPTNI-AWDEFATAFRAAHVPESTI 228
Query: 122 GKKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIG 181
K+ EF LKQG + +Y ++F +L+++ P T D K +F G+ +R +
Sbjct: 229 DMKKEEFNRLKQGNSSINEYLSQFNKLARYAPEEVDT--DKKKIRKFLKGIAVGMRLQLL 286
Query: 182 HQQIRTFTVLVEKCRIFEENDRARREYYKSSKFNKT--------------------SKRR 221
TF ++ K + E+ + E YK K N S +
Sbjct: 287 AHDFPTFQHMINKALLLEDARKEATEEYKKRKSNHQGNSFRGAPRPRYGQPMQYHQSVTQ 346
Query: 222 EERKKPYSPRNY--KPELQNRNYGGARPTNPNSHVT-----------CYRCGKEGHKSWS 268
R+ Y+PR +P Q + + T PNS ++ C+RC + GH +
Sbjct: 347 ANRQPGYAPRPQINRPAPQPQQRAPSGNTAPNSVISFKSPQGPSAVQCFRCNQMGHYARQ 406
Query: 269 CTATTTSGQTNLKPPVVGGTNTTSA----PRNSAGASAQKPGRPVNKGKVFAMTGAEANT 324
C T+ + T T +A P + A + +G+V + A
Sbjct: 407 CPQNPTNTNSGHANGSTARTPTPAAAQSRPSSQASGQGSRASNNFGRGRVNHIQAETAQD 466
Query: 325 SEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVT 384
+ D + G + + +VL+DSGA+HSFIS K L ++V +P + T
Sbjct: 467 APDVVMGMFSVNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRAT 526
Query: 385 SSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEK 444
+C + L IE+ +++ + L + LDIILGM+WL+ + +DC + I LQ K
Sbjct: 527 Q-ICPEVNLRIEEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEK-SITLQGPGGK 584
Query: 445 HTASLPEKEPSAYLILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVI 504
P ++ IL + T ++E +P+V E+P+VFPE++ +PP+RE+EFAI++
Sbjct: 585 QVRFTPNTPTASRSILTCLQVT---SLESVPIVCEYPDVFPEELKRMPPDREIEFAIELA 641
Query: 505 PGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVD 564
PGT PI+ PYR++ ELAE+++Q+EEL SKG++RPS SPWGAPVLLVKKKDGS R+ +D
Sbjct: 642 PGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVID 701
Query: 565 YRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYG 624
YR LN+VTIKN+YPLPRIDDL DQLKGARVFSKIDLRSGYHQ++++S+D+ KTAF TRYG
Sbjct: 702 YRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIPKTAFSTRYG 761
Query: 625 HYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLK 684
YE+ VM FG+TNAPA FM+ MN+IF YLD+FV+VFID+ILIYSK++EEH EH++ +++
Sbjct: 762 LYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDNILIYSKNEEEHAEHLRRIME 821
Query: 685 VLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLG 744
L+D +L+AK SKCEFWL++V FLGHV+S +G+ VDP+KVEAV +W P+ V+ +RSFLG
Sbjct: 822 KLRDHQLFAKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLG 881
Query: 745 LAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKD 804
LAGYYRRFIEGFSK+A P+T+L KK+ F W+ CE SFQ LK+RLT APVLTLPD KD
Sbjct: 882 LAGYYRRFIEGFSKLARPMTELLKKEKKFQWSAACEDSFQELKKRLTTAPVLTLPDIRKD 941
Query: 805 YDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYG 864
++++CDAS+ GLGCVLMQE+KV+AYAS+QLRPHE NYPTHD+ELAAVV ALKIWRHYL G
Sbjct: 942 FEIFCDASRQGLGCVLMQEQKVVAYASRQLRPHEANYPTHDLELAAVVHALKIWRHYLIG 1001
Query: 865 VKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LH 923
+ +Y+DH+SLKY+F Q LNMRQR+W+E ++DYD + YHPGKANVVADALS K+ +
Sbjct: 1002 NRCEVYTDHKSLKYIFTQTELNMRQRKWLELIKDYDLGIHYHPGKANVVADALSHKAYCN 1061
Query: 924 AARLMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHG 983
A++ ++ L + + L T+ Q +LT+ ++++ Q DE +++
Sbjct: 1062 VAQIRPDQDHLCRELEKLRL---TVVQSGVPASLTVQPTLESQIREAQKDDEGIKELIKR 1118
Query: 984 RDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKM 1043
+F G R+CVP ELR IL+E H+S +SIHPG+TKMYQD+K
Sbjct: 1119 IQEKKDTNFSIDDKGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAY 1178
Query: 1044 FWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTT 1103
FWW GMK+D+ + V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT +
Sbjct: 1179 FWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPS 1238
Query: 1104 GHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKF 1163
G+D+IWVIVDRLTKSAHF+ V T+ +KLA +Y+ +V G P IVSDR +F S+F
Sbjct: 1239 GYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAELYMTHVVCRFGCPKKIVSDRGTQFTSRF 1298
Query: 1164 WGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYN 1223
W LHEALGT L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD++G+W+ LP AEFSYN
Sbjct: 1299 WKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLRACALDFEGTWDRCLPYAEFSYN 1358
Query: 1224 NSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDR 1283
NSY +S+ M+P EA++GR+C+TPLCW + + GP++L+ E+V+ IRE+L+ AQ+R
Sbjct: 1359 NSYQASIQMSPNEAMFGRKCRTPLCWNEVGEALVFGPDILKSAEEQVKLIRERLKTAQNR 1418
Query: 1284 QKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRI 1343
QK+Y D R + LEF++GDHV+LRV+P+ G+ R S KL P+Y+GPY I R G VAY++
Sbjct: 1419 QKNYADNRRRDLEFEKGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARHGEVAYQL 1478
Query: 1344 ALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKR 1403
LP L+++H+VFH+SQL+K L + NIELE+NLTY +P+K+LE E+Q R++
Sbjct: 1479 ELPEGLADVHNVFHVSQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEVERQTRRK 1538
Query: 1404 TVPLVKLAWSDDNQD-ATWELEESARKRYPSL 1434
T+ K+ WS+ ++D ATWE E+ R +P L
Sbjct: 1539 TIKFYKVQWSNHSEDEATWEREDLLRAEFPDL 1570
>emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa (japonica cultivar-group)]
gi|50927889|ref|XP_473472.1| OSJNBa0065O17.9 [Oryza
sativa (japonica cultivar-group)]
Length = 1851
Score = 1303 bits (3373), Expect = 0.0
Identities = 671/1440 (46%), Positives = 928/1440 (63%), Gaps = 50/1440 (3%)
Query: 34 FLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSEDRMIAYASYLFHEEARNWWVHAKS 93
FL+ PP F +P A+ WL+ +++ + + YAS+ A +WW + +
Sbjct: 421 FLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWENYCN 480
Query: 94 RITPPDGVLTWSIFKEAFLEKYFPADVKGKKETEFLELKQGEMFVGQYAARFEELSQFHP 153
P + W F AF + P K+ EF LKQG V +Y + F +L+++ P
Sbjct: 481 AHPEPTNI-AWDEFATAFRTAHVPESAIDMKKEEFNRLKQGNSSVNEYLSMFNKLARYAP 539
Query: 154 YYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFTVLVEKCRIFEENDRARREYYKSSK 213
T D K +F G+ +R + TF ++ K + E+ + E YK K
Sbjct: 540 EEVDT--DKKKIRKFFKGIVVGMRLQLIAHDFPTFQHMINKALLLEDARKEATEEYKKRK 597
Query: 214 FNKT--------------------SKRREERKKPYSPRNY--KPELQNRNYGGARPTNPN 251
N S + R+ Y+PR +P Q + + T PN
Sbjct: 598 SNHKGNSSRGAPRPCYGQPMQYHQSVTQANRQPGYAPRPQMNRPAPQPQQRAPSGNTAPN 657
Query: 252 S-----------HVTCYRCGKEGHKSWSCTATTTSGQTNLKPPVVGGTNTTSAPRNSAGA 300
S V C+RC + GH + C T+ + T T +A ++ +
Sbjct: 658 SVTSFKSPQGPSAVQCFRCNQMGHYARQCPQNPTNTNSGHANGSTARTPTPAAAQSRPSS 717
Query: 301 SAQKPGRPVN----KGKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHE 356
A G V+ +G+V + A + D + G + + +VL+DSGA+HS IS
Sbjct: 718 QASGQGSHVSNNFGRGRVNHIQAETAQDATDVVMGMFSVNSVPAIVLFDSGASHSIISQA 777
Query: 357 RAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIIL 416
K L +++ +P + T +C + L IE+ ++ + L + LDIIL
Sbjct: 778 FVKRNGWKTQNLRVPMIIHSPGRNIRATQ-ICPEVNLRIEEVNFLAKPIVLDSQSLDIIL 836
Query: 417 GMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPEKEPSAYLILFSSEGTKRPAMEDIPV 476
GM+WL+ + +DC + I LQ + K ++ IL + T +E +P+
Sbjct: 837 GMDWLAKHKGQIDCAKK-SITLQGPRGKQVRFTSNTPTTSRSILTCLQVT---TLESVPI 892
Query: 477 VREFPEVFPEDMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKG 536
V E+P+VFPE++T +PP+RE+EFAI + PGT PI+ PYR++ ELAE+++Q+EEL SKG
Sbjct: 893 VCEYPDVFPEELTSMPPDREIEFAIKLAPGTAPIAKRPYRMAANELAEVKRQIEELESKG 952
Query: 537 FIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFS 596
++RPS SPWGAPVLLVKKKDGS R+ +DYR LN+VTIKN+YPLPRIDDL DQLKGARVFS
Sbjct: 953 YVRPSSSPWGAPVLLVKKKDGSERMVIDYRALNEVTIKNKYPLPRIDDLFDQLKGARVFS 1012
Query: 597 KIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDK 656
KIDLRSGYHQ++++S+D+ KTAF TRYG YE+ VM FG+TNAPA FM+ MN+IF YLD+
Sbjct: 1013 KIDLRSGYHQLKIRSEDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQ 1072
Query: 657 FVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDG 716
FV+VFIDDILIYSK++EEH EH++++++ L+D +L+AK SKCEFWL++V FLGHV+S +G
Sbjct: 1073 FVVVFIDDILIYSKNEEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISSNG 1132
Query: 717 IAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWT 776
+ VDP+KVEAV +W P V+ +RSFLGLAGYYRRFIEGFSK+A P+T+L KK+ F W+
Sbjct: 1133 VEVDPSKVEAVLAWNPPTNVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEKKFQWS 1192
Query: 777 EKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRP 836
CE SFQ +K+RLT APVLTLPD KD++++CDAS+ GLGCVLMQERKV+AYAS+QLRP
Sbjct: 1193 VACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYASRQLRP 1252
Query: 837 HEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFL 896
HE NYPTHD+ELAAVV ALKIWRHYL G + +Y+DH+SLKY+F Q LNMRQRRW+E +
Sbjct: 1253 HEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELI 1312
Query: 897 EDYDFKLQYHPGKANVVADALSRK-SLHAARLMIEETELIEKFRDMNLIMETLPQGTRLG 955
+DYD + YHPGKANVVADALSRK + A++ ++ L + + L T+ Q
Sbjct: 1313 KDYDLGIHYHPGKANVVADALSRKVYCNVAQIWPDQDRLCRELEKLRL---TVVQSGVPA 1369
Query: 956 TLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELR 1015
+LT+ ++++ Q DE +++ +F G R+CVP ELR
Sbjct: 1370 SLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELR 1429
Query: 1016 QKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSG 1075
IL+E H+S +SIHPG+TKMYQD+K FWW GMK+D+ + V C CQ+VK EHQKP+G
Sbjct: 1430 DLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDVCQRVKAEHQKPAG 1489
Query: 1076 SLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLAR 1135
LQPL IPEWKWE I MDF++GLPRT +G+D+IWVIVDRLTKSAHF+ V TF +KLA
Sbjct: 1490 LLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTFDGKKLAE 1549
Query: 1136 IYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQT 1195
+Y+ +V G P IVSDR +F S+FW LHEALGT L+ S+AYHPQ+DGQ+ER Q
Sbjct: 1550 LYMTRVVCRFGCPKKIVSDRGTQFTSRFWNQLHEALGTDLNFSTAYHPQTDGQTERVNQV 1609
Query: 1196 LEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDK 1255
LEDMLRAC LD++G+W+ LP AEFSYNNSY +S+ M+P EA++GR+C+TPLCW +
Sbjct: 1610 LEDMLRACALDFEGTWDRCLPYAEFSYNNSYQASIQMSPNEAMFGRKCRTPLCWNEAGEA 1669
Query: 1256 ITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGR 1315
+ GP++L+ E+V+ IRE+L+ AQ+ QK+Y D R + LEF++GDHV+LRV+P+ G+ R
Sbjct: 1670 LVFGPDILKTAEEQVKLIRERLKTAQNGQKNYADNRRRDLEFEKGDHVYLRVSPLRGMKR 1729
Query: 1316 SIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPD 1375
S KL P+Y+GPY I R G VAY++ LP L+++H+VFH+SQL+K L +
Sbjct: 1730 FGMSGKLAPRYIGPYLITARRGEVAYQLELPEGLADVHNVFHVSQLKKCLRVPEEQVPLG 1789
Query: 1376 NIELEENLTYPTQPVKILERREKQLRKRTVPLVKLAWSDDNQD-ATWELEESARKRYPSL 1434
NIELE+NLTY +P+K+LE E+Q R++T+ K+ WS+ ++D ATWE E+ R +P L
Sbjct: 1790 NIELEKNLTYKKRPIKVLEEAERQTRRKTIKFYKVQWSNHSEDEATWEQEDLLRAEFPEL 1849
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa (japonica cultivar-group)]
gi|50926528|ref|XP_473211.1| OSJNBa0019D11.8 [Oryza
sativa (japonica cultivar-group)]
Length = 1470
Score = 1302 bits (3370), Expect = 0.0
Identities = 692/1433 (48%), Positives = 927/1433 (64%), Gaps = 45/1433 (3%)
Query: 33 KFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSEDRMIAYASYLFHEEARNWWVHAK 92
+F++ PP F +P A WLR IE+ + E + +A A +WW K
Sbjct: 50 EFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEGPAGDWWDTYK 109
Query: 93 SRITPPDGVLTWSIFKEAFLEKYFPADVKGKKETEFLELKQGEMFVGQYAARFEELSQFH 152
G TW F AF E + PA V K+ EF L+QG V +Y +F +L+++
Sbjct: 110 EAREDGAGEPTWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFTQLARYA 169
Query: 153 PYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFTVLVEKCRIFEENDRARREYYKSS 212
G AD+ K +F GL ++R + Q +F L+ K + END+ E+ +
Sbjct: 170 --IGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKV-VRLENDQRTVEHNRKR 226
Query: 213 KF--NKTSKRREERKKPYSPRNYKPELQNRNYGGA-----RPT--------------NPN 251
+ ++ + +R K +P +KP + N A RP
Sbjct: 227 RLAMSRLPQTVPQRLKGATPSGWKPPVMVTNRPAALSNFNRPVALQNRTPTPTLAAPGAK 286
Query: 252 SHVTCYRCGKEGHKSWSCT-ATTTSGQTNLKPPVVGGTNTTSAPRNSAGA-SAQKPGRPV 309
+V C+ CG+ GH + +C T +T V GT T + R + +
Sbjct: 287 KNVDCFNCGEYGHYANNCPHPRKTPIRTGANAMTVRGTTTPAVGRGLFKTPQSNRTTTGF 346
Query: 310 NKGKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLP 369
+G+V + EA + + G + + VL+DSGA+HSFIS + ++ L + L
Sbjct: 347 GRGQVNHVRAEEAQEDQGVLMGMFSINSTPVKVLFDSGASHSFISLKASQKHNLTLVGLR 406
Query: 370 YDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLD 429
++V +P E V S C P+ + D + +NL+ L + LD+ILGM+WL+ + ++D
Sbjct: 407 KPMIVHSPGGEITV-SHACIDVPIRLRDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVID 465
Query: 430 CRLRVPIFLQKYKEKHTASLPEKEPSAYLILFSSEG---TKRPAMEDIPVVREFPEVFPE 486
CR R + A++ +++P L G T P ++ +PVV+ FP+VFPE
Sbjct: 466 CRRREVTLTTPWGSDMRATM-DQDPR----LTERAGGIFTMLP-LKGMPVVQRFPDVFPE 519
Query: 487 DMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWG 546
D+ +PP+R+VEF ID+IPGT PIS PYR+ EL EL+KQ+ EL KGF+RPS SPWG
Sbjct: 520 DLPGMPPDRDVEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQQKGFVRPSSSPWG 579
Query: 547 APVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQ 606
APVL KKKDGSMR+CVDYR LN+VTIKN+YPLPRIDDL DQLKGA+VFSKIDLRSGYHQ
Sbjct: 580 APVLFDKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQ 639
Query: 607 IRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDIL 666
++++++D+ KTAF TRYG YE+ VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDIL
Sbjct: 640 LKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDIL 699
Query: 667 IYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEA 726
IYSK +EEH EH+++VL+ L+ KLYAK SKCEFWL++V FLGHV+S G+AVDPAKVEA
Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 727 VNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTL 786
V WK P++VT +RSFLGLAGYYRRFIEGFSKIA P+TQL KK+ FVW+E+C+ SF+ L
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEKKFVWSEQCQESFEQL 819
Query: 787 KERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDM 846
KE+LT AP+L LPD KD+ +YCDAS+ GLG VLMQ+ KV+AYAS+QLRPHE+NYPTHD+
Sbjct: 820 KEKLTSAPILVLPDIRKDFVIYCDASRQGLGGVLMQDEKVVAYASRQLRPHEENYPTHDL 879
Query: 847 ELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYH 906
EL AVV ALKIWRHYL G IY+DH+SLKY+F Q LN+RQRRW+E ++DYD ++ YH
Sbjct: 880 ELVAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDLEVHYH 939
Query: 907 PGKANVVADALSRKSLHAARLMIE--ETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFI 964
PGKANVVADALSRKS H L +E EL E+ +NL + Q L L I
Sbjct: 940 PGKANVVADALSRKS-HCNHLRMEGMVPELREEIAQLNLHIVPRGQINTLDIQPLLRTQI 998
Query: 965 EEVKKEQARDENLQKE-AHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGH 1023
EE +K+ +++ A GR D D LW Y+ R+ VPE G LR IL+E H
Sbjct: 999 EEAQKDNEEVREVKERLAAGRAKEFSTD---EKDVLW-YKKRIYVPEQGGLRGLILKEAH 1054
Query: 1024 KSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIP 1083
+S +S+HP +TKMYQDLK+ +WWP MK+D+ + V C CQKVK EHQ+P+G LQPL IP
Sbjct: 1055 ESAYSLHPRSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGLLQPLRIP 1114
Query: 1084 EWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVR 1143
EWKW+ I MDF+ GLP+T TG+D+IWVIVDRLTK+A FI V + S KLA +Y+ IV
Sbjct: 1115 EWKWDEIGMDFIVGLPKTATGYDSIWVIVDRLTKTARFIPVKTNYSSAKLAELYMTRIVC 1174
Query: 1144 LHGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRAC 1203
LHGVP I+SDR +F S FW +HEALG+ L+ S+AYHPQ+DGQ+ERT Q LEDMLRAC
Sbjct: 1175 LHGVPKKIISDRGTQFTSHFWEKVHEALGSYLAFSTAYHPQTDGQTERTNQVLEDMLRAC 1234
Query: 1204 VLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELL 1263
LD+ WE LP AEFSYNNS+ +SL M+P EAL+GRRC+TPL W ++ GP+++
Sbjct: 1235 ALDFSKDWERCLPYAEFSYNNSFQASLKMSPNEALFGRRCRTPLMWSETGERAVFGPDII 1294
Query: 1264 QEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLT 1323
QE EKVR IR++L++AQ RQKSY D R + LEF+EGD+V+L+V+P+ G R KL
Sbjct: 1295 QEAEEKVRLIRDRLKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLA 1354
Query: 1324 PKYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENL 1383
P+Y+GP+QI R G VAY++ LP +++ +H VFH+SQL+K L + I + +L
Sbjct: 1355 PRYVGPFQITARRGEVAYQLQLPENIAEVHPVFHVSQLKKCLRVPEEQAPLEEIHISNDL 1414
Query: 1384 TYPTQPVKILERREKQLRKRTVPLVKLAWSDDNQ-DATWELEESARKRYPSLF 1435
TYP P++IL+ EK+ R + + K+ WS+ + +ATWE EE R YP LF
Sbjct: 1415 TYPEHPIRILDEAEKRTRSKVWRMYKVQWSNHTEAEATWESEEFLRTEYPHLF 1467
>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa (japonica cultivar-group)]
gi|50930427|ref|XP_474741.1| OSJNBa0059D20.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1470
Score = 1298 bits (3360), Expect = 0.0
Identities = 687/1433 (47%), Positives = 930/1433 (63%), Gaps = 45/1433 (3%)
Query: 33 KFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSEDRMIAYASYLFHEEARNWWVHAK 92
+F++ PP F +P A WLR IE+ + E + +A+ A +WW K
Sbjct: 50 EFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWWDTYK 109
Query: 93 SRITPPDGVLTWSIFKEAFLEKYFPADVKGKKETEFLELKQGEMFVGQYAARFEELSQFH 152
G W F AF + + PA V K+ EF +L+QG V +Y RF +L+++
Sbjct: 110 EAREEDAGEPNWEEFTTAFRDNFVPAAVMRMKKNEFRKLRQGNTTVQEYLNRFTQLARYA 169
Query: 153 PYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFTVLVEKCRIFEENDRARREYYKSS 212
AD+ K +F GL ++R + Q +F L+ K + ENDR E+ +
Sbjct: 170 TR--DLADEEEKIDKFIEGLNDELRGPMIGQDHDSFQSLINKV-VRLENDRKVVEHNRKR 226
Query: 213 KF--NKTSKRREERKKPYSPRNYKPELQNRNYGGA------------RPTNPNSHVT--- 255
+ N+ + +R K +P ++P + + A R PN T
Sbjct: 227 RLAMNRPPQTAPQRPKGTTPSAWRPTVVTTSRPAASSNFHRPVTIQNRAPTPNQAATGSV 286
Query: 256 ----CYRCGKEGHKSWSCT-ATTTSGQTNLKPPVVGGTNTTSAPRNSAGA-SAQKPGRPV 309
C+ CG+ GH + C T +T + GT T +A R +
Sbjct: 287 RPGSCFNCGEYGHFANKCPHPNKTPIRTGANATAIHGTATPAAGRGLFRTPQTNRTATGF 346
Query: 310 NKGKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLP 369
+G+V + EA + + G L + VL+DSGA+HSFIS + ++ L +L
Sbjct: 347 GRGQVNHVRAEEAQEDQGVLMGMFSLNSTPVKVLFDSGASHSFISLKASQQHNLTRVKLR 406
Query: 370 YDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLD 429
++V +P E AV ++ C P+ + D + +NL+ L + LD+ILGM+WL+ + ++D
Sbjct: 407 QPMLVHSPGGEIAVDTA-CIDVPIRLRDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVID 465
Query: 430 CRLRVPIFLQKYKEKHTASLPEKEPSAYLILFSSEG---TKRPAMEDIPVVREFPEVFPE 486
CR R + A++ +++P L G T P ++ +P+V+ FP+VFPE
Sbjct: 466 CRRREVTLTTPWGSDMRATM-DQDPR----LTERAGGIFTMLP-LKGMPIVQRFPDVFPE 519
Query: 487 DMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWG 546
D+ +PP+R++EF ID+IPGT PIS PYR+ EL EL+KQ+ EL KGF+RPS SPWG
Sbjct: 520 DLPGMPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWG 579
Query: 547 APVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQ 606
A VL VKKKDGSMR+CVDYR LN+VTIKN+YPLPRID+L DQLKGA+VFSKIDLRSGYHQ
Sbjct: 580 AQVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDNLFDQLKGAKVFSKIDLRSGYHQ 639
Query: 607 IRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDIL 666
++++++D+ KTAF TRYG YE+ VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDIL
Sbjct: 640 LKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDKFVVVFIDDIL 699
Query: 667 IYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEA 726
IYSK +EEH EH+++VL+ L+ KLYAK SKCEFWL++V FLGHV+S G+AVDPAKVEA
Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 727 VNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTL 786
V WK P++VT +RSFLGLA YYRRFIEGFSKIA P+TQL KK+ FVW+E+C+ SF+ L
Sbjct: 760 VTEWKAPKSVTEIRSFLGLARYYRRFIEGFSKIARPMTQLLKKEKKFVWSEQCQESFEQL 819
Query: 787 KERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDM 846
KE+LT AP+L LPD KD+ +YCDAS+ GLG VLMQ+ KV+AYAS+QLRPHE+NYPTHD+
Sbjct: 820 KEKLTSAPILVLPDIRKDFVIYCDASRQGLGGVLMQDGKVVAYASRQLRPHEENYPTHDL 879
Query: 847 ELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYH 906
ELAAVV ALKIWRHYL G IY+DH+SLKY+F Q LN+RQRRW+E ++DYD ++ YH
Sbjct: 880 ELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDLEVHYH 939
Query: 907 PGKANVVADALSRKSLHAARLMIE--ETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFI 964
PGKANVVADALSRK +H L +E EL E+ +NL + Q L L I
Sbjct: 940 PGKANVVADALSRK-IHCNHLRMEGMVPELREEIAQLNLHIVPRGQINTLDIQPLLRTQI 998
Query: 965 EEVKKEQARDENLQKE-AHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGH 1023
EE +K+ +++ A GR D D LW Y+ R+ VPE G LR IL+E H
Sbjct: 999 EEAQKDNEEVREVKERLAAGRAKEFSTD---EKDVLW-YKKRIYVPEQGGLRGLILKEAH 1054
Query: 1024 KSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIP 1083
+S +S+HPG+TKMYQDLK+ +WWP MK+D+ + V C CQKVK EHQ+P+G LQPL IP
Sbjct: 1055 ESAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGLLQPLRIP 1114
Query: 1084 EWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVR 1143
EWKW+ I MDF+ GLP+T TG+D+IWVIVDRLTK+A FI V + S KLA +Y+ IV
Sbjct: 1115 EWKWDEIGMDFIVGLPKTATGYDSIWVIVDRLTKTARFIPVKTNYSSAKLAELYMTRIVC 1174
Query: 1144 LHGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRAC 1203
LHGVP I+SDR +F S FW +HEALG+ L+ S+AYHPQ+DGQ+ERT Q LEDMLRAC
Sbjct: 1175 LHGVPKKIISDRGTQFTSHFWEKVHEALGSYLAFSTAYHPQTDGQTERTNQVLEDMLRAC 1234
Query: 1204 VLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELL 1263
LD+ WE LP AEFSYNNS+ +SL M+P EAL+GRRC+TPL W ++ GP+++
Sbjct: 1235 ALDFSKDWERCLPYAEFSYNNSFQASLKMSPNEALFGRRCRTPLMWSETGERAVFGPDII 1294
Query: 1264 QEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLT 1323
QE EKVR IR++L+IAQ RQKSY D R + LEF+EGD+++L+V+P+ G R KL
Sbjct: 1295 QEAEEKVRLIRDRLKIAQSRQKSYADTRRRNLEFKEGDYIYLKVSPMRGTKRFKVKGKLA 1354
Query: 1324 PKYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENL 1383
P+Y+GP+QI+ R G VAY++ LP +++++H VFH+SQL+K L + + + +L
Sbjct: 1355 PRYVGPFQIIARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQAPLEEVHISNDL 1414
Query: 1384 TYPTQPVKILERREKQLRKRTVPLVKLAWSD-DNQDATWELEESARKRYPSLF 1435
TYP P++IL+ K+ R + + K+ WS+ ++ATWE EE R YP LF
Sbjct: 1415 TYPEHPIRILDEAAKRTRSKVWRMYKVQWSNHTEEEATWESEEFLRTEYPHLF 1467
>gb|AAP53838.1| putative gag-pol protein [Oryza sativa (japonica cultivar-group)]
gi|37534498|ref|NP_921551.1| putative gag-pol protein
[Oryza sativa (japonica cultivar-group)]
Length = 1470
Score = 1295 bits (3352), Expect = 0.0
Identities = 683/1432 (47%), Positives = 930/1432 (64%), Gaps = 43/1432 (3%)
Query: 33 KFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSEDRMIAYASYLFHEEARNWWVHAK 92
+F++ PP F +P A WLR IE+ + E + +A+ A +WW K
Sbjct: 50 EFMRTKPPTFATAEEPMDAEDWLRIIEKKLTLVRVREADKVIFAANQLEGPAGDWWDTYK 109
Query: 93 SRITPPDGVLTWSIFKEAFLEKYFPADVKGKKETEFLELKQGEMFVGQYAARFEELSQFH 152
G W F AF + + PA V K+ EF L+QG V +Y RF +L+++
Sbjct: 110 EAREEDAGEPNWEEFTTAFRDNFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFTQLARYA 169
Query: 153 PYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFTVLVEKCRIFEENDRARREYYKSS 212
AD+ K +F GL ++R + Q +F L+ K + ENDR E+ +
Sbjct: 170 TR--DLADEEEKIDKFIEGLNDELRGPMIGQDHDSFQSLINKV-VRLENDRKVVEHNRKR 226
Query: 213 KF--NKTSKRREERKKPYSPRNYKPELQNRNYGGA------------RPTNPNSHVT--- 255
+ N+T + +R K + ++P + + A R PN T
Sbjct: 227 RLAMNRTPQTAPQRPKWTTSSAWRPTVVTTSRPAASSNFHRPVTIQNRAPAPNQAATGSV 286
Query: 256 ----CYRCGKEGHKSWSCT-ATTTSGQTNLKPPVVGGTNTTSAPRNSAGA-SAQKPGRPV 309
C+ CG+ GH + C T +T + GT T +A R +
Sbjct: 287 RPGSCFNCGEYGHFANKCPHPNKTPIRTGTNATAIHGTATPAAGRGLFRTPQTNRTATGF 346
Query: 310 NKGKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLP 369
+G+V + EA + + G L + V +DSGA+HSFIS + ++ L +L
Sbjct: 347 GRGQVNHVRAEEAQEDQGVLMGMFSLNSTPVKVPFDSGASHSFISLKASQQHNLTRVKLR 406
Query: 370 YDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLD 429
++V +P E AV ++ C P+ + D + +NL+ L + LD+ILGM+WL+ + ++D
Sbjct: 407 QPMLVHSPGGEIAVDTA-CIDVPIRLRDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVID 465
Query: 430 CRLRVPIFLQKYKEKHTASLPEKEPSAYLILFSSEG---TKRPAMEDIPVVREFPEVFPE 486
CR R + A++ +++P L G T P ++ +PVV+ FP+VFPE
Sbjct: 466 CRRREVTLTTPWGSDMRATM-DQDPR----LTERAGGIFTMLP-LKGMPVVQRFPDVFPE 519
Query: 487 DMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWG 546
D+ +PP+R++EF ID+IPGT PIS PYR+ EL EL+KQ+ EL KGF+RPS SPWG
Sbjct: 520 DLPGMPPDRDIEFIIDLIPGTAPISKRPYRMPVNELEELKKQIRELQEKGFVRPSSSPWG 579
Query: 547 APVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQ 606
APVL VKKKD SMR+CVDYR LN+VTIKN+YPLPRIDDL DQLKGA+VFSKIDLRSGYHQ
Sbjct: 580 APVLFVKKKDSSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQ 639
Query: 607 IRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDIL 666
++++++D+ KTAF TRYG YE+ VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDIL
Sbjct: 640 LKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDIL 699
Query: 667 IYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEA 726
IYSK +EEH EH+++VL+ L+ KLYAK SKCEFWL++V FLGHV+S G+AVDPAKVEA
Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759
Query: 727 VNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTL 786
V WK P++VT +RSFLGLA YYRRFIE FSKIA P+TQL KK+ FVW+E+C+ SF+ L
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAEYYRRFIEWFSKIARPMTQLLKKEKKFVWSEQCQESFEQL 819
Query: 787 KERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDM 846
KE+LT AP+L LPD KD+ +YCDAS+ GLG VLMQ+ KV+AYAS+QLRPHE+NYPTHD+
Sbjct: 820 KEKLTSAPILVLPDIRKDFVIYCDASRQGLGGVLMQDGKVVAYASRQLRPHEENYPTHDL 879
Query: 847 ELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYH 906
ELAAVV ALKIWRHYL G IY+DH+SLKY+F Q LN+RQRRW+E ++DYD ++ YH
Sbjct: 880 ELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDLEVHYH 939
Query: 907 PGKANVVADALSRKSLHAARLMIE--ETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFI 964
PGKANVVADALSRKS H L +E EL E+ +NL +P G ++ TL +
Sbjct: 940 PGKANVVADALSRKS-HCNHLRMEGMVPELREEIAQLNL--HIVPHG-QINTLDIQPLLR 995
Query: 965 EEVKKEQARDENLQKEAHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHK 1024
++++ Q +E +++ + +F + Y+ R+ VPE G LR IL+E H+
Sbjct: 996 TQIEEAQKDNEEVREVKERLAAGRAKEFSTDEKNVLWYKKRIYVPEQGGLRGLILKEAHE 1055
Query: 1025 SDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPE 1084
S +S+HPG+TKMYQDLK+ +WWP MK+D+ + V C CQKVK EHQ+P+G LQPL IPE
Sbjct: 1056 SAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGLLQPLRIPE 1115
Query: 1085 WKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRL 1144
WKW+ I MDF+ GLP+T TG+D+IWVIVDRLTK+A FI V + S KLA +Y+ IV L
Sbjct: 1116 WKWDEIGMDFIVGLPKTATGYDSIWVIVDRLTKTARFIPVKTNYSSAKLAELYMTRIVCL 1175
Query: 1145 HGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACV 1204
HG+P I+SDR +F S FW +HEALG+ L+ S+AYHPQ+DGQ+ERT Q LEDMLRAC
Sbjct: 1176 HGIPKRIISDRGTQFTSHFWEKVHEALGSYLTFSTAYHPQTDGQTERTNQVLEDMLRACA 1235
Query: 1205 LDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQ 1264
LD+ WE LP AEFSYNNS+ +SL M+P EAL+GRRC+TPL W ++ GP+++Q
Sbjct: 1236 LDFSKDWERCLPYAEFSYNNSFQASLRMSPNEALFGRRCRTPLMWSETGERAVFGPDIIQ 1295
Query: 1265 EMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTP 1324
E EKV IR++L++AQ RQKSY D R + LEF+EGD+V+L+V+P+ G R KL P
Sbjct: 1296 EAEEKVHLIRDRLKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAP 1355
Query: 1325 KYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLT 1384
+Y+GP+QI+ R G VAY++ LP +++++H VFH+SQL+K L S + I + +LT
Sbjct: 1356 RYVGPFQIIARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVSEEQAPLEEIHISNDLT 1415
Query: 1385 YPTQPVKILERREKQLRKRTVPLVKLAWSDDNQD-ATWELEESARKRYPSLF 1435
YP P++IL+ EK+ R + + K+ WS+ +D ATWE EE R YP LF
Sbjct: 1416 YPKHPIRILDEAEKRTRSKVWHMYKVQWSNHTEDEATWESEEFLRTEYPHLF 1467
>gb|AAP52384.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531590|ref|NP_920097.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|19881768|gb|AAM01169.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1449
Score = 1294 bits (3349), Expect = 0.0
Identities = 676/1435 (47%), Positives = 923/1435 (64%), Gaps = 74/1435 (5%)
Query: 39 PPLFDGGYDPEGANRWLRKIEQIYESLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPP 98
PP F +P A WL +E+ + + +E +++AS+ H A WW H +
Sbjct: 39 PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFRQGRAGG 98
Query: 99 DGVLTWSIFKEAFLEKYFPADVKGKKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTT 158
+ + TW F AF + + P V K+ EF L QG V +Y F L+++ P T
Sbjct: 99 EPI-TWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVHT 157
Query: 159 ADDASKCIRFECGLRPDIRAAIGHQQIRTFTVLVEKC-RIFEENDRARREYYKSSKFNKT 217
++ + +F GL ++ + + R F LV+K R ++ +R ++ ++++F K
Sbjct: 158 DEERQE--KFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQF-KA 214
Query: 218 SKRREERKK-------PYSPRN-----YKPELQ--NRNYGG---------ARPT------ 248
+ +R + P P+ +P+ Q N N G ARP
Sbjct: 215 QQGSNQRPRLIPGPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGNENRNVVARPAATPVQN 274
Query: 249 ------NPNSHVTCYRCGKEGHKSWSCTATTTSGQTNLKPPVVGGTNTTSAPRNSAGASA 302
+ V C+ CG GH + C P P NS
Sbjct: 275 QPVRKEQGSKPVICFNCGDPGHYADKC-------------PKPRHVKNVPVPNNS----- 316
Query: 303 QKPGRPVNKGKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKSLK 362
P K +V + AEA + D + GT + I VL+DSGATHSF+S A
Sbjct: 317 ---NVPAPKARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHG 373
Query: 363 LVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNWLS 422
+ + L L+V TP + ++ C + IE + ++L+ L + LD+ILGM+WLS
Sbjct: 374 MEVVSLGRPLLVNTPGNQ-VFSTRYCPSVTIEIEGVPFPSSLILLESKDLDVILGMDWLS 432
Query: 423 INNVLLDCRLRVPIFLQKYKEKHTASLPEKEPSAYLILFSSEGTKRPAMEDIPVVREFPE 482
+ ++DC R E T S P ++ ++ + + A+++IP+V+++P+
Sbjct: 433 RHRGVIDCANRKVTLTNSNGE--TVSFFASSPKSHGVVLN-----QVALQEIPIVQDYPD 485
Query: 483 VFPEDMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKGFIRPSV 542
VFPED+ +PP+R++EF ID++PGT PI PYR++ ELAE++KQV++LL KG+IRPS
Sbjct: 486 VFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPST 545
Query: 543 SPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRS 602
SPWGAPV+ V+KKD + R+CVDYR LN+VTIKN+YPLPRIDDL DQLKGA VFSKIDLRS
Sbjct: 546 SPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRS 605
Query: 603 GYHQIRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFI 662
GYHQ+R++ +D+ KTAF TRYG +E VM FG+TNAPA FM+ MN++F YLDKFV+VFI
Sbjct: 606 GYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFI 665
Query: 663 DDILIYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPA 722
DDILIYSK+KEEH EH+++ L+ L++ +LYAK SKCEFWL +V+FLGHV+S G+AVDP+
Sbjct: 666 DDILIYSKTKEEHKEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPS 725
Query: 723 KVEAVNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*S 782
VE+V SWK P+TV+ VRSFLGLAGYYRRFIE FSKIA P+T+L +K+ + WTE CE S
Sbjct: 726 NVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQS 785
Query: 783 FQTLKERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYP 842
FQ LK+RL APVL LPD K + VYCDAS+ GLGCVLMQE KV+AYAS+QLRPHE NYP
Sbjct: 786 FQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYP 845
Query: 843 THDMELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFK 902
THD+ELAAVV ALKIWRHYLYG + +Y+DH+SLKY+F Q LNMRQRRW+E ++DYD +
Sbjct: 846 THDLELAAVVHALKIWRHYLYGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDME 905
Query: 903 LQYHPGKANVVADALSRKS-LHAARLMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTN 961
+ YHPGKANVVADALSRKS + + EL ++F +NL + + L
Sbjct: 906 IHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFEKLNL---GIVSKGFVAALEAKP 962
Query: 962 EFIEEVKKEQARDENLQKEAHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEE 1021
+++++ Q D +Q+ F++ G R+CVPE EL+ I++E
Sbjct: 963 TLFDQIREAQVNDPYIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKE 1022
Query: 1022 GHKSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLS 1081
H++ +SIHPG+TKMYQDLK+ FWW M+++I + V C CQ+VK EHQKP+G LQPL
Sbjct: 1023 AHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLK 1082
Query: 1082 IPEWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEI 1141
IPEWKWE I MDF++GLPRT+ GHD+IWV+VDRLTK AHFI V T+ KLA +Y+ +
Sbjct: 1083 IPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARV 1142
Query: 1142 VRLHGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLR 1201
V LHGVP IVSDR +F SKFW L LGTRL+ S+AYHPQ+DGQ+ER Q LEDMLR
Sbjct: 1143 VCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLR 1202
Query: 1202 ACVLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPE 1261
ACVLD+ GSW+ LP AEFSYNNSY +SL M+P EALYGR+C+TPL W ++ G +
Sbjct: 1203 ACVLDFGGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTD 1262
Query: 1262 LLQEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKK 1321
+L+E EKV+ I+E+LR+AQ QKSY D R + L F+EGD+V+LRVTP+ GV R K
Sbjct: 1263 ILREAEEKVKIIQERLRVAQSCQKSYADNRRRDLVFEEGDYVYLRVTPLRGVHRFQTKGK 1322
Query: 1322 LTPKYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEE 1381
L P+++GP++I+ R G VAY++ LPPS++ +HDVFH+SQL+K L + +PD IEL+E
Sbjct: 1323 LAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDCIELQE 1382
Query: 1382 NLTYPTQPVKILERREKQLRKRTVPLVKLAWSD-DNQDATWELEESARKRYPSLF 1435
+LTY +PV+ILE E++ R R + K+ WS+ ++ATWE E+ + +P LF
Sbjct: 1383 DLTYVEKPVRILEVSERKTRNRVIRFCKVQWSNHSEEEATWEREDELKSAHPHLF 1437
>gb|AAP52480.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531782|ref|NP_920193.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|18657010|gb|AAL78097.1| Putative polyprotein [Oryza
sativa]
Length = 1473
Score = 1293 bits (3345), Expect = 0.0
Identities = 682/1471 (46%), Positives = 934/1471 (63%), Gaps = 82/1471 (5%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
QL N + Q + Q K + +FL+ PP+F +P A WL IE+ +
Sbjct: 34 QLMNMMMQQFQNQQNQGNNHAPPQNK-LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLD 92
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAK-SRITPPDGVLTWSIFKEAFLEKYFPADVKG 122
L + +++AS+ H A WW H + +RIT +TW F AF + + P+ V
Sbjct: 93 LLQCTNQEKVSFASHQLHGPASEWWDHFRLNRITAEP--ITWLEFTAAFRKTHIPSGVVS 150
Query: 123 KKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGH 182
K+ EF L QG V +Y F L+++ P +D + +F GL ++ +
Sbjct: 151 LKKKEFRSLTQGSRSVTEYLHEFNRLARYAPE--DVRNDEERQEKFLGGLNDELSYPLMV 208
Query: 183 QQIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPY------------SP 230
F LV+K + D+ R K + + ++ +KP S
Sbjct: 209 GDYPDFQKLVDKA--IRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQPMPQGGSS 266
Query: 231 RNYKPELQ--NRNYGG------------------ARPTNPNSHVTCYRCGKEGHKSWSCT 270
+P+ Q N N G A+ + V C+ CG GH + C
Sbjct: 267 SVVRPQRQFFNNNAGNNIRNQAPRPVAAPAQQQPAKREQGSKPVVCFNCGDPGHYADKCP 326
Query: 271 ATTTSGQTNLKPPVVGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAMTGAEANTSEDFIQ 330
KP V NSA P +K +V + AEA + D I
Sbjct: 327 ----------KPRRV---KVVPVQNNSAV--------PASKARVNHVAAAEAQDAPDVIL 365
Query: 331 GTCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKK 390
GT + + VL+DSGATHSF+S A + + + L L+V+TP+ + A++
Sbjct: 366 GTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQ-ALSLQRSPS 424
Query: 391 CPLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLP 450
+ I+ ++ NL+ L + LD+ILGM+WL+ + ++DC R + L Y +
Sbjct: 425 VRIEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANR-KVTLNSYDGRVVT--- 480
Query: 451 EKEPSAYLILFSSEGTK----RPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPG 506
+ SSE + + +E+IP+VRE+P+VFP+D+ +PP+R++EF ID++PG
Sbjct: 481 -------VHALSSESLRSRLNQVTLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPG 533
Query: 507 TTPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYR 566
TTPI PYR++ ELAE+++QV++LL KG+IRPS SPWGAPV+ V+KKD + R+CVDYR
Sbjct: 534 TTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYR 593
Query: 567 QLNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHY 626
LN VTIKN+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R+K +D+ KTAF TRYG +
Sbjct: 594 ALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFITRYGLF 653
Query: 627 EYLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVL 686
E VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDILIYS++KEEH EH+++ L+ L
Sbjct: 654 ECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKL 713
Query: 687 KDRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLA 746
++ +LYAK SKCEFWL +V+FLGHV+S G+AVDP+ VE+V +WK P+TV+ +RSFLGLA
Sbjct: 714 REHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLA 773
Query: 747 GYYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYD 806
GYYRRFIE FSKIA P+T+L +KD + W+E+CE SFQ LK RL AP+L LPDP K +
Sbjct: 774 GYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLVSAPILILPDPKKGFQ 833
Query: 807 VYCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVK 866
VYCDASK GLGCVLMQ+ KV+AYAS+QLRPHE+NYPTHD++LAAVV ALKIWRHYL+G +
Sbjct: 834 VYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLKLAAVVHALKIWRHYLFGTR 893
Query: 867 FTIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAA 925
+Y+DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVVADALSRK +A
Sbjct: 894 TEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNAT 953
Query: 926 RLMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRD 985
EL ++F +NL + + L I++V++ Q D ++Q+ R
Sbjct: 954 EGRQLPLELCKEFERLNL---GIVSRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNRR 1010
Query: 986 SMSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFW 1045
FL+ G R+CVP+ +L+ IL+E H + +SIHPG+TKMYQDLKK FW
Sbjct: 1011 RGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKKRFW 1070
Query: 1046 WPGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGH 1105
W MK++I + V C CQ+VK EHQKP+G LQPL IPEWKWE I MDF++GLPRT++GH
Sbjct: 1071 WASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGH 1130
Query: 1106 DAIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWG 1165
D+IWVIVDRLTK AHFI V T+ +LA +Y+ IV LHGVP IVSDR +F S FW
Sbjct: 1131 DSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWK 1190
Query: 1166 SLHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNS 1225
L E +G++L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ GSW+ LP AEFSYNNS
Sbjct: 1191 KLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNS 1250
Query: 1226 YHSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQK 1285
Y +SL MAP+EALYGR+C+TPL W ++ G ++L+E EKV+ I+E+LR+AQ R K
Sbjct: 1251 YQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHK 1310
Query: 1286 SYYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIAL 1345
SY D R + L F+EGD+V+LRVTP+ GV R KL P+++GPY+I+ R G VAY++ L
Sbjct: 1311 SYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQLEL 1370
Query: 1346 PPSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTV 1405
P SL+ +HDVFH+SQL+K L + + IE++E+LTY +P++ILE E++ R R +
Sbjct: 1371 PQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRNRVI 1430
Query: 1406 PLVKLAWSD-DNQDATWELEESARKRYPSLF 1435
K+ WS+ +++TWE E+ + +P LF
Sbjct: 1431 RFCKVQWSNHSEEESTWEREDELKSAHPYLF 1461
>gb|AAP52586.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531994|ref|NP_920299.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22857578|gb|AAN09852.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1715
Score = 1291 bits (3341), Expect = 0.0
Identities = 679/1470 (46%), Positives = 935/1470 (63%), Gaps = 80/1470 (5%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
QL N + Q + Q K + +FL+ PP+F +P A+ WL IE+ +
Sbjct: 276 QLMNMMMQQFQNQQNQGNNHVPPQNK-LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLD 334
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVKGK 123
L ++ +++AS+ H A WW H + T + + TW F AF + + P+ V
Sbjct: 335 LLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAEPI-TWLEFTAAFRKTHIPSGVVSL 393
Query: 124 KETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQ 183
K+ EF L QG V +Y F L+++ P +D + +F GL ++ +
Sbjct: 394 KKKEFRSLSQGSRSVTEYLHEFNRLARYAPE--DVRNDEERQEKFLGGLNDELSYPLMVG 451
Query: 184 QIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPY------------SPR 231
F LV+K + D+ R K + + ++ +KP S
Sbjct: 452 DYPDFQKLVDKA--IRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQPMPQGGSSS 509
Query: 232 NYKPELQ--NRNYGG------------------ARPTNPNSHVTCYRCGKEGHKSWSCTA 271
+P+ Q N N G A+ N V C+ CG GH + C
Sbjct: 510 VVRPQRQFFNNNAGNNIRNLAPRPVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP- 568
Query: 272 TTTSGQTNLKPPVVGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAMTGAEANTSEDFIQG 331
KP V A NSA P +K +V + AEA + D I G
Sbjct: 569 ---------KPRRV---KVVPAQNNSAV--------PTSKARVNHVAAAEAQDAPDVILG 608
Query: 332 TCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKC 391
+ + VL+DSGATHSF+S A + + + L L+V+TP+ + A++
Sbjct: 609 MFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQ-ALSLQRSPSV 667
Query: 392 PLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPE 451
+ I+ ++ NL+ L + LD+ILGM+WL+ + ++DC R + L Y +
Sbjct: 668 RIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANR-KVTLNSYDGRVVT---- 722
Query: 452 KEPSAYLILFSSEGTK----RPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGT 507
+ SSE + + +E+IP+VRE+P+VFP+D+ +PP+R++EF ID++PGT
Sbjct: 723 ------VHALSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGT 776
Query: 508 TPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQ 567
TPI PYR++ ELAE+++QV++LL KG+IRPS SPWGAPV+ V+KKD + R+CVDYR
Sbjct: 777 TPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRA 836
Query: 568 LNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYE 627
LN VTIKN+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R+K +D+ KTAF TRYG +E
Sbjct: 837 LNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFE 896
Query: 628 YLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLK 687
VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDILIYS++KEEH EH+++ L+ L+
Sbjct: 897 CTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLR 956
Query: 688 DRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAG 747
+ +LYAK SKCEFWL +V+FLGH++S G+AVDP+ VE+V +WK P+TV+ +RSFLGLAG
Sbjct: 957 EHQLYAKFSKCEFWLSEVKFLGHIISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAG 1016
Query: 748 YYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDV 807
YYRRFIE FSKIA P+T+L +KD + W+E+CE SFQ LK RL AP+L LPDP K + V
Sbjct: 1017 YYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQV 1076
Query: 808 YCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKF 867
YCDASK GLGCVLMQ+ KV+AYAS+QLRPHE+NYPTHD+ELAAVV ALKIWRHYL+G +
Sbjct: 1077 YCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRT 1136
Query: 868 TIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAAR 926
+Y+DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVVADALSRK +A
Sbjct: 1137 EVYTDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATE 1196
Query: 927 LMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDS 986
EL ++F +NL + +G + L I++V++ Q D ++Q+
Sbjct: 1197 GRQLPLELCKEFERLNL--GIVGRGF-VAALEAKPTLIDQVREAQINDPDIQEIKKNMRR 1253
Query: 987 MSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWW 1046
FL+ G R+CVP+ +L+ IL+E H + +SIHPG+TKMYQDLK+ FWW
Sbjct: 1254 GKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWW 1313
Query: 1047 PGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHD 1106
MK++I + V C CQ+VK EHQKP+G LQPL IPEWKWE I MDF++GLPRT++GHD
Sbjct: 1314 ASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHD 1373
Query: 1107 AIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGS 1166
+IWVIVDRLTK AHFI V T+ +LA +Y+ IV LHGVP IVSDR +F S FW
Sbjct: 1374 SIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKK 1433
Query: 1167 LHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSY 1226
L E +G++L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ GSW+ LP AEFSYNNSY
Sbjct: 1434 LQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSY 1493
Query: 1227 HSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKS 1286
+SL MAP+EALYGR+C+TPL W ++ G ++L+E EKV+ I+E+LR+AQ R KS
Sbjct: 1494 QASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKS 1553
Query: 1287 YYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALP 1346
Y D R + L F+EGD+V+LRVTP+ GV R KL P+++GPY+I+ R G VAY++ LP
Sbjct: 1554 YADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELP 1613
Query: 1347 PSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVP 1406
SL+ +H+VFH+SQL+K L + + IE++E+LTY +P++ILE E++ R R +
Sbjct: 1614 QSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETNERRTRNRVIR 1673
Query: 1407 LVKLAWSD-DNQDATWELEESARKRYPSLF 1435
K+ WS+ +++TWE E+ + +P LF
Sbjct: 1674 FCKVQWSNHSEEESTWEREDELKSAHPHLF 1703
>emb|CAE75877.1| B1234D02.1 [Oryza sativa (japonica cultivar-group)]
gi|38344464|emb|CAE04935.2| OSJNBa0017P10.12 [Oryza
sativa (japonica cultivar-group)]
gi|50921977|ref|XP_471349.1| OSJNBa0017P10.12 [Oryza
sativa (japonica cultivar-group)]
Length = 1742
Score = 1291 bits (3341), Expect = 0.0
Identities = 683/1470 (46%), Positives = 937/1470 (63%), Gaps = 80/1470 (5%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
QL N + Q + Q K + +FL+ PP+F +P A+ WL IE+ +
Sbjct: 303 QLMNMMMQQFQNQQNQGNNHAPPQNK-LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLD 361
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVKGK 123
L ++ +++AS+ H A WW H + T + + TW F AF + + P+ V
Sbjct: 362 LLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAEPI-TWLEFTAAFRKTHIPSGVVSL 420
Query: 124 KETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQ 183
K+ EF L QG V +Y F L+++ P +D + +F GL ++ +
Sbjct: 421 KKKEFRSLSQGTRSVTEYLHEFNRLARYAPE--DVRNDEERQEKFLGGLNDELSYPLMVG 478
Query: 184 QIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPY------------SPR 231
F LV+K + D+ R K + + ++ +KP S
Sbjct: 479 DYPDFQKLVDKA--IRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQPMPQGGSSS 536
Query: 232 NYKPELQ--NRNYGG----------ARPTNP--------NSHVTCYRCGKEGHKSWSCTA 271
+P+ Q N N G A PT N V C+ CG GH + C
Sbjct: 537 VVRPQRQFFNNNAGNNIRNQAPRPIAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCP- 595
Query: 272 TTTSGQTNLKPPVVGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAMTGAEANTSEDFIQG 331
KP V A NSA P +K +V + AEA + D I G
Sbjct: 596 ---------KPRRV---KVVPAENNSAV--------PASKARVNHVAAAEAQDAPDVILG 635
Query: 332 TCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKC 391
T + + +VL+DSGATHSF+S + + + L L+V+TP+ + A++
Sbjct: 636 TFLVNSVPAIVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQ-ALSLQRSPSV 694
Query: 392 PLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPE 451
+ I+ ++ NL+ L + LD+ILGM+WL+ + ++DC R + L Y + ++P
Sbjct: 695 RIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANR-KVTLNSY-DGRVVTVPA 752
Query: 452 KEPSAYLILFSSEGTK----RPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGT 507
SSE + + +E+IP+VRE+P+VFP+D+ +PP+R++EF ID++PGT
Sbjct: 753 ---------LSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGT 803
Query: 508 TPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQ 567
TPI PYR++ ELAE+++QV++LL KG+IRPS SPWGAPV+ V+KKD + R+CVDYR
Sbjct: 804 TPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRA 863
Query: 568 LNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYE 627
LN VTIKN+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R+K +D+ KTAF TRYG +E
Sbjct: 864 LNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFE 923
Query: 628 YLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLK 687
VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDILIYS++KEEH EH+++ L+ L+
Sbjct: 924 CTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLR 983
Query: 688 DRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAG 747
+ +LYAK SK EFWL +V+FLGHV+S G+AVDP+ VE+V +WK P+TV+ +RSFLGLAG
Sbjct: 984 EHQLYAKFSKREFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAG 1043
Query: 748 YYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDV 807
YYRRFIE FSKIA P+T+L +KD + W+E+CE SFQ LK RL AP+L LPDP K + V
Sbjct: 1044 YYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQV 1103
Query: 808 YCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKF 867
YCDASK GLGCVLMQ+ KV+AYAS+QLRPHE+NYPTHD+ELAAVV ALKIWRHYL+G +
Sbjct: 1104 YCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRT 1163
Query: 868 TIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAAR 926
+Y+DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVVADALSRK +A
Sbjct: 1164 EVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATE 1223
Query: 927 LMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDS 986
EL ++F +NL + +G + L I++V++ Q D ++Q+
Sbjct: 1224 GRQLPLELCKEFERLNL--GIVGRGF-VAALEAKPTLIDQVREAQINDPDIQEIKKNMRR 1280
Query: 987 MSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWW 1046
FL+ G R+CVP+ +L+ IL+E H + +SIHPG+TKMYQDLK+ FWW
Sbjct: 1281 GKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWW 1340
Query: 1047 PGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHD 1106
MK++I + V C CQ+VK EHQKP+G LQPL IPEWKWE I MDF++GLPRT++GHD
Sbjct: 1341 ASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHD 1400
Query: 1107 AIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGS 1166
+IWVIVDRLTK AHFI V T+ +LA +Y+ IV LHGVP IVSDR +F S FW
Sbjct: 1401 SIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKK 1460
Query: 1167 LHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSY 1226
L E +G++L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ GSW+ LP AEFSYNNSY
Sbjct: 1461 LQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSY 1520
Query: 1227 HSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKS 1286
+SL MAP+EALYGR+C+TPL W ++ G ++L+E EKV+ I+E+LR+AQ R KS
Sbjct: 1521 QASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKS 1580
Query: 1287 YYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALP 1346
Y D R + L F+EGD+V+LRVTP GV R KL P+++GPY+I+ R G VAY++ LP
Sbjct: 1581 YADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELP 1640
Query: 1347 PSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVP 1406
SL+ +H+VFH+SQL+K L + D IE++E+LTY +P++ILE E++ R R +
Sbjct: 1641 QSLAGVHNVFHLSQLKKCLRVPTEEANLDQIEVQEDLTYVEKPIRILESNERRTRNRVIR 1700
Query: 1407 LVKLAWSD-DNQDATWELEESARKRYPSLF 1435
K+ WS+ +++TWE E+ + +P LF
Sbjct: 1701 FCKVQWSNHSEEESTWEREDELKSAHPHLF 1730
>emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa (japonica cultivar-group)]
Length = 1516
Score = 1291 bits (3340), Expect = 0.0
Identities = 687/1468 (46%), Positives = 934/1468 (62%), Gaps = 70/1468 (4%)
Query: 12 QAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSEDR 71
Q A+ QQ P V K +D FL+ PP F +P AN WLR IE+ L ++
Sbjct: 63 QQAQQNQQFGPPPSHVSKLLD-FLRIQPPTFSSTTNPMEANDWLRAIEKKLNLLQCNDQE 121
Query: 72 MIAYASYLFHEEARNWWV-HAKSRITPPDGVLTWSIFKEAFLEKYFPADVKGKKETEFLE 130
+A+A++ A WW + +R+ + +TW+ F ++F + P + +++ EF
Sbjct: 122 KVAFATHQLQGPASAWWDNYVATRLDATE--VTWAEFCQSFRKAQIPEGIMAQQKREFRA 179
Query: 131 LKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFTV 190
L+QG M V +Y F L+++ P T DA K +F GL ++ + F
Sbjct: 180 LQQGTMSVTEYLHEFNRLARYAPEDVRT--DAEKQEKFLFGLDDELTNQLISGVYEDFEK 237
Query: 191 LVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPYSP-RNYKPELQNRNYGGA---- 245
LV+K I +E R NK ++R+ + + N KP GG
Sbjct: 238 LVDKA-IRQEEQR-----------NKMDRKRKAAQISFPQGNNQKPRFMTGQLGGPSTLI 285
Query: 246 ----RPTNPNSHVTCYRCGKEGH---KSWSCTATTTSGQTNLKPPVVGGTNTTSAPRNSA 298
RP +P++ Y G + ++ + T PP V + + P+ A
Sbjct: 286 VCQHRPYHPSNFDNDYNGGSHNNSKQRNHNSTPPPLMAPAQSDPPTV--SVQSEQPKKGA 343
Query: 299 GASAQKPGRPVNKGKVFAMTGA----------------------EANTSEDFIQGTCFLC 336
KPG N GK G EA + + + GT +
Sbjct: 344 ---VGKPGPCFNCGKHGHFAGKCPKLNRTGPRFIQARANHVSAEEAQAAPEVVLGTFPVN 400
Query: 337 DISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIE 396
VL+DSGA+HSFIS A + L + +L + V TP + T+ C + I+
Sbjct: 401 SYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMR-TAHYCPSVTIEIK 459
Query: 397 DREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPEKEPS- 455
+++NL+ L + LD+ILGM+WL+ N ++DC R K T P + S
Sbjct: 460 RSPFLSNLILLESKDLDVILGMDWLTRNKGVIDCASRTITLTNDKGGKITFRSPASQKSV 519
Query: 456 AYLILFSSEGT-----KRPA-MEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTTP 509
A L + EG K P +EDIP+V+E+PEVFPED+T +PP+RE+EF ID+ PGT P
Sbjct: 520 ASLNQAAIEGQTETVEKSPRKLEDIPIVQEYPEVFPEDLTTMPPKREIEFRIDLAPGTAP 579
Query: 510 ISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLN 569
I PYR++ ELAE++KQV+E L KG+IRPS SPWGAPV+ V+KKD + R+CVDYR LN
Sbjct: 580 IYKRPYRMAANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALN 639
Query: 570 KVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYL 629
+VTIKN+YPLPRIDDL DQLKGA+VFSKIDLRSGYHQ+R++ +D+ KTAF TRYG +E
Sbjct: 640 EVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECT 699
Query: 630 VMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDR 689
VM FG+TNAPA FM+ MN++F +LDKFV+VFIDDILIYSKS+EEH +H+++VL++LK+
Sbjct: 700 VMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEILKEH 759
Query: 690 KLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYY 749
+LYAK SKC+FWL +V+FLGH++S G+AVDP+ VE+V W P+TV+ +RSFLGLAGYY
Sbjct: 760 QLYAKFSKCDFWLSEVKFLGHIISAQGVAVDPSNVESVTKWTPPKTVSQIRSFLGLAGYY 819
Query: 750 RRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYC 809
RRFIE FSKIA P+TQL KKD F W+ +C SF+ LK++L APVL LPD +KD+ VYC
Sbjct: 820 RRFIENFSKIARPMTQLLKKDEKFKWSAECNQSFEELKKKLVSAPVLILPDQTKDFQVYC 879
Query: 810 DASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFTI 869
DAS+ GLGCVLMQE +V+AYAS+QLRPHE NYPTHD+ELAAVV ALKIWRHYL G + +
Sbjct: 880 DASRQGLGCVLMQEGRVVAYASRQLRPHETNYPTHDLELAAVVHALKIWRHYLIGNRCEV 939
Query: 870 YSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAARLM 928
Y+DH+SLKY+F Q LN+RQRRW+E ++DYD + YHPGKANVVADALSRKS +A
Sbjct: 940 YTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSYCNAVYTE 999
Query: 929 IEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMS 988
+ +L + +NL + + + L +++V+ Q D + +
Sbjct: 1000 VMCDKLQQDLEHLNL---GIVEHGYVAALEARPTLVDQVRAAQVNDPEIAELKKNMRVGK 1056
Query: 989 RPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPG 1048
DF + +G RLCVP+ EL+ IL E H++ +SIHPG+TKMYQDLK+ FWW
Sbjct: 1057 ARDFHEDENGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWAS 1116
Query: 1049 MKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAI 1108
M+++I + V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT++GHD+I
Sbjct: 1117 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1176
Query: 1109 WVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLH 1168
WV+VDRLTK AHFI V+ T+ ++LA +Y+ I+ LHGVP IVSDR +F SKFW L
Sbjct: 1177 WVVVDRLTKVAHFIPVHTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQ 1236
Query: 1169 EALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHS 1228
E LGTRL+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ G+W+ LP AEFSYNNSY S
Sbjct: 1237 EELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQS 1296
Query: 1229 SLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYY 1288
SL MAPFEALYGR+C+TPL W ++ G E+L E EKVR++RE+LRIAQ RQKSY
Sbjct: 1297 SLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLTEAEEKVRTVRERLRIAQSRQKSYA 1356
Query: 1289 DKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPS 1348
D R + L F+ GD+V+LRVTP+ GV R KL P+++GPY+IL+R G VAY++ LP +
Sbjct: 1357 DNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSN 1416
Query: 1349 LSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLV 1408
+ +HDVFH+SQL+K L ++I+++E+LTY +P+ ILE E++ R + +
Sbjct: 1417 MVGIHDVFHVSQLKKCLRVPEEQASSEHIDIQEDLTYVEKPICILETSERRTRNKVIKFC 1476
Query: 1409 KLAWS-DDNQDATWELEESARKRYPSLF 1435
K+ WS ++ATWE E+ + +P LF
Sbjct: 1477 KVQWSHHSEEEATWEREDELKAAHPHLF 1504
>ref|XP_475750.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|48843822|gb|AAT47081.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1524
Score = 1290 bits (3339), Expect = 0.0
Identities = 686/1461 (46%), Positives = 927/1461 (62%), Gaps = 58/1461 (3%)
Query: 12 QAARAEQQN-QPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSED 70
Q A+ +QQN Q + +FL+ PP F +P A+ WL IE+ L +E
Sbjct: 73 QQAQLQQQNLQFGPPPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQ 132
Query: 71 RMIAYASYLFHEEARNWWVHAKSRITPPDGV-LTWSIFKEAFLEKYFPADVKGKKETEFL 129
+A+A++ A WW + +T P G +TW+ F +F + P + +K+ EF
Sbjct: 133 EKVAFATHQLQGPASIWWDNYM--VTRPTGAEVTWTEFCHSFNKAQVPEGIVAQKKREFR 190
Query: 130 ELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFT 189
L+QG V +Y F L+++ P T DA + +F GL ++ + + F
Sbjct: 191 SLQQGTRTVIEYLHEFNRLARYAPEDVRT--DAERQEKFLSGLDDELTNQLISRDYEDFE 248
Query: 190 VLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPYSPRNYKPELQNRNYGGA---- 245
LV D+A R+ +K N+ KR+ + + ++ KP ++GG
Sbjct: 249 KLV---------DKAIRQEEHCNKINR--KRKAAQFRTPQGKSQKPRFTMGHHGGPSTMI 297
Query: 246 ----RPTNPNSHVTCYRCGKEGHK---SWSCTATTTSGQTNLKPPVVGGTNTTSAPRNSA 298
RP +P S + G + S + T ++ P + +
Sbjct: 298 IRQHRPYHPGSFNKNHHSGSHNNSEQHSLNPTPSSLKIPAQSVQPALPEQPKRLVEKPEL 357
Query: 299 GASAQKPGRPVNK-------------GKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYD 345
+ KPG V K +V + EA ++ + I GT + V+L+D
Sbjct: 358 CFNCNKPGHTVGKCPKPRRAGPKFVQARVNHASAEEAQSAPEVILGTFPVNSTPAVILFD 417
Query: 346 SGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLV 405
SGATHSFIS A + L + +L + V TP T+ C + I+ + NL+
Sbjct: 418 SGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGG-GMTTTHYCPSVTVEIQGSIFPANLI 476
Query: 406 CLPLEGLDIILGMNWLSINNVLLDCRLR----------VPIFLQKYKEKHTASLPEKEPS 455
L + LD+ILGM+WL+ + ++DC R V F +K SL +
Sbjct: 477 LLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEVVTFQSPVPQKPRISLNQAAGE 536
Query: 456 AYLILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTTPISAAPY 515
+ K +EDIP+VRE+PEVFP+D+T +PP+R++EF ID++PGT PI PY
Sbjct: 537 EQEVAVEKTTKK---LEDIPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTAPIHKRPY 593
Query: 516 RISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKN 575
R+ ELAE++KQV+E L KG+IRPS SPWGAPV+ V+KKD + R+CVDYR LN+VTIKN
Sbjct: 594 RMGANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKN 653
Query: 576 RYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVMPFGV 635
+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R++ +D+ KTAF TRYG +E VM FG+
Sbjct: 654 KYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGL 713
Query: 636 TNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKLYAKL 695
TNAPA FM+ MN++F +LDKFV+VFIDDILIYSKS+EEH +H+++VL+ LK+ +LYAK
Sbjct: 714 TNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKF 773
Query: 696 SKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRRFIEG 755
SKC+FWL++VQFLGH+V+ G+AVDPA VE+V W P TVT VRSFLGLAGYYRRFIE
Sbjct: 774 SKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIEN 833
Query: 756 FSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDASKSG 815
FSKIA P+TQL KK+ F+W+ +C SF+ LK RL APVL LPD +KD+ VYCDAS+ G
Sbjct: 834 FSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQG 893
Query: 816 LGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYSDHQS 875
LGCVLMQ+ KV++YAS+QLRPHE NYPTHD+ELAAVV ALKIWRHYL G + +Y+DH+S
Sbjct: 894 LGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKS 953
Query: 876 LKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKSLHAARLMIEETELI 935
LKY+F Q LN+RQRRW+E ++DYD + YHPGKANVVADALSRKS H +EE
Sbjct: 954 LKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKS-HCNVAWVEEL-CC 1011
Query: 936 EKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRPDFLKG 995
E RD+ + + + + L +E+V+ QA D + + F++
Sbjct: 1012 EVQRDLGHLNLGIVEHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGKARGFVED 1071
Query: 996 PDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMK 1055
G RLCVPE EL+ IL E H++ +SIHPG+TKMYQDLK+ FWW M+++I +
Sbjct: 1072 EQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAE 1131
Query: 1056 KVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWVIVDRL 1115
V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT++GHD+IWV+VDRL
Sbjct: 1132 FVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRL 1191
Query: 1116 TKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEALGTRL 1175
TK AHFI V+ T+ +KLA +Y+ I+ LHGVP IVSDR +F SKFW L E LGTRL
Sbjct: 1192 TKMAHFIPVHTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRL 1251
Query: 1176 SLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPF 1235
+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ G+W+ LP AEFSYNNSY +SL MAPF
Sbjct: 1252 NFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPF 1311
Query: 1236 EALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDKRHKPL 1295
EALYGRRC+TPL W ++ G E+L E EKVR++RE+LRIAQ RQKSY D R + L
Sbjct: 1312 EALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEKVRAVRERLRIAQSRQKSYADNRRREL 1371
Query: 1296 EFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLSNLHDV 1355
F+ GD+V+LRVTP+ GV R KL P+++GPY+IL+R G VAY++ LP ++ +H+V
Sbjct: 1372 AFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHNV 1431
Query: 1356 FHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLVKLAWS-D 1414
FH+SQL+K L PD+IE++E+LTY +P +ILE E++ R + + K+ WS
Sbjct: 1432 FHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSHH 1491
Query: 1415 DNQDATWELEESARKRYPSLF 1435
++ATWE E+ + +P LF
Sbjct: 1492 SEEEATWEREDELKATHPHLF 1512
>ref|XP_493959.1| Similar to Sorghum bicolor 22 kDa kafirin cluster; polyprotein.
(AF061282) [Oryza sativa (japonica cultivar-group)]
Length = 1524
Score = 1290 bits (3338), Expect = 0.0
Identities = 683/1464 (46%), Positives = 925/1464 (62%), Gaps = 49/1464 (3%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
Q+ + QA + +Q Q + +FL+ PP F +P A+ WL IE+
Sbjct: 66 QVLQQVQRQAQQQQQNLQFGPPPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLN 125
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGV-LTWSIFKEAFLEKYFPADVKG 122
L +E +A+A++ A WW + +T P G +TW+ F+ +F + P +
Sbjct: 126 LLQCNEQEKVAFATHQLQGPASVWWDNYM--VTRPAGAEVTWTEFRHSFNKAQVPEGIVA 183
Query: 123 KKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGH 182
+K+ EF L+QG V +Y F L+++ P T DA K +F GL ++ +
Sbjct: 184 QKKREFRSLQQGTRTVIEYLHEFNLLARYAPEDVRT--DAEKQEKFMSGLDDELTNQLIS 241
Query: 183 QQIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERK----------------- 225
+ F LV+K EE+ K+++F + ++ +
Sbjct: 242 RDYEDFEKLVDKAIRQEEHCNKINRKRKAAQFRTPQGKSQKPRFTMGHHGGPSTMIIRQH 301
Query: 226 KPYSPRNYKPELQNRNYGGARPTNPNSHVTCYRCGKEGHKSWSCTATTTSGQTNLKPPVV 285
+PY P N+ N+N+ N H S A + +P +
Sbjct: 302 RPYHPGNF-----NKNHHNGSHNNSEQHSL-----NPTPSSLKIPAQSVQPALPEQPKRL 351
Query: 286 GGTNTTSAPRNSAGASAQKPGRPVNKGKVFAM------TGAEANTSEDFIQGTCFLCDIS 339
G N G + K +P G F + EA ++ + I GT +
Sbjct: 352 GEKPELCFNCNKPGHTVGKCPKPRRAGPKFVQARVNHASAEEAQSAPEVILGTFPVNSTP 411
Query: 340 LVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDRE 399
V+L+DSGATHSFIS A + L + +L + V TP T+ C + I+
Sbjct: 412 AVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGG-GMTTTHYCPSVTVEIQGLI 470
Query: 400 YITNLVCLPLEGLDIILGMNWLSINNVLLDCRLR-VPIFLQKYKEKHTASLPEKEPSAYL 458
+ NL+ L + LD+ILGM+WL+ + ++DC R + + K +E SL ++P L
Sbjct: 471 FPANLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEEVTFQSLVPRKPGVSL 530
Query: 459 ILFSSEGTK------RPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTTPISA 512
+ E + +EDIP+VRE+PEVFP+D+T +PP+R++EF ID++PGT PI
Sbjct: 531 NQAAGEEQEVAVEKTTKKLEDIPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTAPIHK 590
Query: 513 APYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVT 572
PYR+ ELAE++KQV+E L KG+IRPS SPWGAPV+ V+KKD + R+CVDYR LN+VT
Sbjct: 591 RPYRMGANELAEVKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVT 650
Query: 573 IKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVMP 632
IKN+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R++ +D+ KTAF TRYG +E VM
Sbjct: 651 IKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMS 710
Query: 633 FGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKLY 692
FG+TNAPA FM+ MN++F +LDKFV+VFIDDILIYSKS+EEH +H+++VL+ LK+ +LY
Sbjct: 711 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLY 770
Query: 693 AKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRRF 752
AK SKC+FWL++VQFLGH+V+ G+AVDPA VE+V W P TVT VRSFLGLAGYYRRF
Sbjct: 771 AKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRF 830
Query: 753 IEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDAS 812
IE FSKIA P+TQL KK+ F+W+ +C SF LK RL APVL LPD +KD+ VYCDAS
Sbjct: 831 IENFSKIAKPMTQLLKKEEKFIWSAECNRSFVELKRRLVSAPVLILPDQTKDFQVYCDAS 890
Query: 813 KSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYSD 872
+ GLGCVLMQ+ KV++YAS+QLRPHE NYPTHD+ELAAVV ALKIWRHYL G + +Y+D
Sbjct: 891 RQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTD 950
Query: 873 HQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKSLHAARLMIEET 932
H+SLKY+F Q LN+RQRRW+E ++DYD + YHPGKANVVADALSRKS + E
Sbjct: 951 HKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSY--CNVAWVEQ 1008
Query: 933 ELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRPDF 992
E RD+ + + + + L +E+V+ QA D + + F
Sbjct: 1009 LCCEVQRDLEHLNLGIVEHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGKARGF 1068
Query: 993 LKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMKKD 1052
++ G RLCVPE EL+ IL E H++ +SIHPG+TKMYQDLK+ FWW M+++
Sbjct: 1069 VEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRRE 1128
Query: 1053 IMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWVIV 1112
I + V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT++GHD+IWV+V
Sbjct: 1129 IAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVV 1188
Query: 1113 DRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEALG 1172
DRLTK AHFI V+ T+ +KLA +Y+ I+ LHGVP IVSDR +F SKFW L E LG
Sbjct: 1189 DRLTKVAHFIPVHTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELG 1248
Query: 1173 TRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSLGM 1232
TRL+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ G+W+ LP AEFSYNNSY +SL M
Sbjct: 1249 TRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQM 1308
Query: 1233 APFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDKRH 1292
APFEALYGRRC+TPL W ++ G E+L E EKVR++RE+LRIAQ RQKSY D R
Sbjct: 1309 APFEALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEKVRAVRERLRIAQSRQKSYADNRR 1368
Query: 1293 KPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLSNL 1352
+ L F+ GD+V+LRVTP+ GV R KL P+++GPY+IL+R G VAY++ LP ++ +
Sbjct: 1369 RELAFETGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGI 1428
Query: 1353 HDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLVKLAW 1412
H+VFH+SQL+K L PD IE++E+LTY +P +ILE E++ R + + K+ W
Sbjct: 1429 HNVFHVSQLKKCLRVPEEQASPDQIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQW 1488
Query: 1413 S-DDNQDATWELEESARKRYPSLF 1435
S ++ATWE E+ + +P LF
Sbjct: 1489 SHHSEEEATWEREDELKATHPHLF 1512
>emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa (japonica cultivar-group)]
gi|50930145|ref|XP_474600.1| OSJNBb0115I21.3 [Oryza
sativa (japonica cultivar-group)]
Length = 1779
Score = 1289 bits (3336), Expect = 0.0
Identities = 678/1470 (46%), Positives = 935/1470 (63%), Gaps = 80/1470 (5%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
QL N + Q + Q K + +FL+ PP+F +P A+ WL IE+ +
Sbjct: 340 QLMNMMMQQFQNQQNQGNNHAPPQNK-LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLD 398
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVKGK 123
L ++ +++AS+ H A WW H + T + + TW F AF + + P+ V
Sbjct: 399 LLQCTDQDKVSFASHQLHGPASEWWDHFRLNRTTAEPI-TWLEFTAAFRKTHIPSGVVSL 457
Query: 124 KETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQ 183
K+ EF L QG V +Y F L+++ P ++ + +F GL ++ +
Sbjct: 458 KKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEECQE--KFLGGLNDELSYPLMVG 515
Query: 184 QIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPY------------SPR 231
F LV+K + D+ R K + + ++ +KP S
Sbjct: 516 DYPDFQKLVDKA--IRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQSVPQGGSSS 573
Query: 232 NYKPELQ--NRNYGG------------------ARPTNPNSHVTCYRCGKEGHKSWSCTA 271
+P+ Q N N G A+ N V C+ CG GH + C
Sbjct: 574 VVRPQRQFFNNNAGNNIRNQAPRPVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCP- 632
Query: 272 TTTSGQTNLKPPVVGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAMTGAEANTSEDFIQG 331
KP V A NSA P +K +V + AEA + D I G
Sbjct: 633 ---------KPRRV---KVVPAQNNSAV--------PASKARVNHVAAAEAQGAPDVILG 672
Query: 332 TCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKC 391
T + + VL+DSGATHSF+S A + + + L L+V+TP+ + A++
Sbjct: 673 TFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQ-ALSLQRSPSV 731
Query: 392 PLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPE 451
+ I+ ++ NL+ L + LD+ILGM+WL+ + ++DC R + L Y +
Sbjct: 732 RIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANR-KVTLNSYDGRVVT---- 786
Query: 452 KEPSAYLILFSSEGTK----RPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGT 507
+ SSE + + +E+IP+VRE+P+VFP+D+ +PP+R++EF ID++PGT
Sbjct: 787 ------VHALSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGT 840
Query: 508 TPISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQ 567
TPI PYR++ ELAE+++QV++LL KG+IRPS SPWGAPV+ V+KKD + R+CVDYR
Sbjct: 841 TPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRA 900
Query: 568 LNKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYE 627
LN VTIKN+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R+K +D+ KTAF TRYG +E
Sbjct: 901 LNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFE 960
Query: 628 YLVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLK 687
VM FG+TNAPA FM+ MN++F YLDKFV+VFIDDILIYS++KEEH EH+++ L+ L+
Sbjct: 961 CTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLR 1020
Query: 688 DRKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAG 747
+ +LYAK SKCEFWL +V+FLGHV+S G+AVDP+ VE+V +WK P+TV+ +RSFLGLAG
Sbjct: 1021 EHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAG 1080
Query: 748 YYRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDV 807
YYRRFIE FSKIA P+T+L +KD + W+E+CE SFQ LK RL AP+L LPDP K + V
Sbjct: 1081 YYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQV 1140
Query: 808 YCDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKF 867
YCDASK GLGCVLMQ+ KV+AYAS+QLRPHE+NYPTHD+ELAAVV ALKIWRHYL+G +
Sbjct: 1141 YCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRT 1200
Query: 868 TIYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAAR 926
+Y+DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVV DALSRK +A
Sbjct: 1201 EVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVVDALSRKGYCNATE 1260
Query: 927 LMIEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDS 986
EL ++F +NL + +G + L I++V++ Q D ++Q+
Sbjct: 1261 GRQLPLELCKEFERLNL--GIVGRGF-VAALEAKPTLIDQVREAQINDPDIQEIKKNMRR 1317
Query: 987 MSRPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWW 1046
FL+ G R+CVP+ +L+ +L+E H + +SIHPG+TKMYQDLK+ FWW
Sbjct: 1318 GKAIGFLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYQDLKERFWW 1377
Query: 1047 PGMKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHD 1106
MK++I + V C CQ+VK EHQKP+G LQPL IPEWKWE I MDF++GLPRT++GHD
Sbjct: 1378 ASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHD 1437
Query: 1107 AIWVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGS 1166
+IWVIVDRLTK AHFI V T+ +LA +Y+ IV LHGVP IVSDR +F S FW
Sbjct: 1438 SIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKK 1497
Query: 1167 LHEALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSY 1226
L E +G++L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ GSW+ LP AEFSYNNSY
Sbjct: 1498 LQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSY 1557
Query: 1227 HSSLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKS 1286
+SL MAP+EALYGR+C+TPL W ++ G ++L+E EKV+ I+E+LR+AQ R KS
Sbjct: 1558 QASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQSRHKS 1617
Query: 1287 YYDKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALP 1346
Y D R + L F+EGD+V+LRVTP+ GV R KL P+++GPY+I+ R G VAY++ LP
Sbjct: 1618 YADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELP 1677
Query: 1347 PSLSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVP 1406
SL+ +H+VFH+SQL+K L + + IE++E+LTY +P++ILE E++ R R +
Sbjct: 1678 QSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETNERRTRNRVIR 1737
Query: 1407 LVKLAWSD-DNQDATWELEESARKRYPSLF 1435
K+ WS+ +++TWE E+ + +P LF
Sbjct: 1738 FCKVQWSNHSEEESTWEREDELKSAHPHLF 1767
>ref|NP_917371.1| Putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1475
Score = 1288 bits (3334), Expect = 0.0
Identities = 674/1441 (46%), Positives = 926/1441 (63%), Gaps = 79/1441 (5%)
Query: 33 KFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSEDRMIAYASYLFHEEARNWWVHAK 92
+FL+ PP+F +P A+ WL IE+ + L ++ +++AS+ H A WW H +
Sbjct: 64 EFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFR 123
Query: 93 SRITPPDGVLTWSIFKEAFLEKYFPADVKGKKETEFLELKQGEMFVGQYAARFEELSQFH 152
T + + TW F AF + + P+ V K+ EF L QG V +Y F L+++
Sbjct: 124 LNRTTAEPI-TWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYA 182
Query: 153 PYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFTVLVEKCRIFEENDRARREYYKSS 212
P +D + +F GL ++ + F LV+K + D+ R K
Sbjct: 183 PE--DVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKA--IRQEDKYNRMEQKKR 238
Query: 213 KFNKTSKRREERKKPY------------SPRNYKPELQ--NRNYGG-------------- 244
+ + ++ +KP S +P+ Q N N G
Sbjct: 239 RIAQFKTQQGNNQKPRLTLGPQSMPQGCSSSVVRPQRQFFNNNAGNNIRNQAPRPVAVPA 298
Query: 245 ----ARPTNPNSHVTCYRCGKEGHKSWSCTATTTSGQTNLKPPVVGGTNTTSAPRNSAGA 300
A+ N V C+ CG GH + C KP V A NSA
Sbjct: 299 QQQPAKREQGNKPVVCFNCGDPGHYADKCP----------KPRRV---KVVPAQNNSAV- 344
Query: 301 SAQKPGRPVNKGKVFAMTGAEANTSEDFIQGTCFLCDISLVVLYDSGATHSFISHERAKS 360
P +K +V + AEA + D I GT + + VL+DSGATHSF+S A +
Sbjct: 345 -------PASKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGN 397
Query: 361 LKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEGLDIILGMNW 420
+ + L L+V+TP+ + A++ + I+ ++ NL+ L + LD+ILGM+W
Sbjct: 398 HGMEVEDLRRPLMVSTPSNQ-ALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDW 456
Query: 421 LSINNVLLDCRLRVPIFLQKYKEKHTASLPEKEPSAYLILFSSEGTK----RPAMEDIPV 476
L+ + ++DC R + L Y + + SSE + + +E+IP+
Sbjct: 457 LARHKGVIDCANR-KVTLNSYDGRVVT----------VHALSSESLRSRLNQITLEEIPI 505
Query: 477 VREFPEVFPEDMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAELQKQVEELLSKG 536
VRE+P+VFP+D+ +PP+R++EF ID++PGTTPI PYR++ ELAE+++QV++LL KG
Sbjct: 506 VREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKG 565
Query: 537 FIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDDLMDQLKGARVFS 596
+IRPS SPWGAPV+ V+KKD + R+CVDYR LN VTIKN+YPLPRIDDL DQLKGA VFS
Sbjct: 566 YIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFS 625
Query: 597 KIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDK 656
KIDLRSGYHQ+R+K +D+ KTAF TRYG +E VM FG+TNAPA FM+ MN++F YLDK
Sbjct: 626 KIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDK 685
Query: 657 FVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQVQFLGHVVSEDG 716
FV+VFIDDILIYS++KEEH EH+++ L+ L++ +LYAK SKCEFWL +V+ LGHV+S G
Sbjct: 686 FVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKLLGHVISAGG 745
Query: 717 IAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLTQLTKKDHPFVWT 776
+AVDP+ VE+V +WK P+TV+ +RSFLGLAGYYRRFIE FSKIA P+T+L +KD + W+
Sbjct: 746 VAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWS 805
Query: 777 EKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQERKVIAYASQQLRP 836
E+CE SFQ LK RL AP+L LPDP K + VYCDASK GLGCVLMQ+ KV+AYAS+QLRP
Sbjct: 806 EECERSFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRP 865
Query: 837 HEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKTLNMRQRRWVEFL 896
HE+NYPTHD+ELAAVV ALKIWRHYL+G + +Y+DH+SLKY+F Q LNMRQRRW+E +
Sbjct: 866 HEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELI 925
Query: 897 EDYDFKLQYHPGKANVVADALSRKS-LHAARLMIEETELIEKFRDMNLIMETLPQGTRLG 955
+DYD + YHPGKANVVADALSRKS + EL ++F +NL + +G +
Sbjct: 926 KDYDMGIHYHPGKANVVADALSRKSYCNVTEGRQLPLELCKEFERLNL--GIVGRGF-IA 982
Query: 956 TLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRPDFLKGPDGLWRYQGRLCVPEGGELR 1015
L I++V++ Q D ++Q+ FL+ G R+CVP+ +L+
Sbjct: 983 ALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLK 1042
Query: 1016 QKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQKVKGEHQKPSG 1075
IL+E H + +SIHPG+TKMYQDLK+ FWW MK++I + V C CQ+VK EHQKP+G
Sbjct: 1043 DAILKEAHDTLYSIHPGSTKMYQDLKERFWWVSMKREIAEYVAVCDVCQRVKAEHQKPAG 1102
Query: 1076 SLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAVNMTFPSEKLAR 1135
LQPL IPEWKWE I MDF++GLPRT++GHD+IWVIVDRLTK AHFI V T+ +LA
Sbjct: 1103 LLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAE 1162
Query: 1136 IYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQSDGQSERTIQT 1195
+Y+ IV LHGVP IVSDR +F S FW L E +G++L+ S+AYHPQ+DGQ+ER Q
Sbjct: 1163 LYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQI 1222
Query: 1196 LEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCKTPLCWLSGEDK 1255
LEDMLRAC LD+ GSW+ LP AEFSYNNSY +SL MAP+EALYGR+C+TPL W ++
Sbjct: 1223 LEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGER 1282
Query: 1256 ITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVFLRVTPITGVGR 1315
G ++L+E EKV+ I+E+LR+AQ R KSY D R + L F+EGD+V+LRVTP+ GV R
Sbjct: 1283 QVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHR 1342
Query: 1316 SIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKYLPDSSHVIEPD 1375
KL P+++GPY+I+ R G VAY++ LP SL+ +H+VFH+SQL+K L + +
Sbjct: 1343 FQTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLE 1402
Query: 1376 NIELEENLTYPTQPVKILERREKQLRKRTVPLVKLAWSD-DNQDATWELEESARKRYPSL 1434
IE++E+LTY +P++ILE E++ R R + K+ WS+ +++TWE E+ + +P L
Sbjct: 1403 QIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYL 1462
Query: 1435 F 1435
F
Sbjct: 1463 F 1463
>gb|AAP53008.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37532838|ref|NP_920721.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|16905208|gb|AAL31078.1| putative polyprotein [Oryza
sativa]
Length = 1524
Score = 1288 bits (3333), Expect = 0.0
Identities = 686/1468 (46%), Positives = 926/1468 (62%), Gaps = 57/1468 (3%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
Q+ + QA + +Q Q + +FL+ PP F +P A+ WL IE+
Sbjct: 66 QVLQQVQQQAQQQQQNPQFGPPPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLN 125
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGV-LTWSIFKEAFLEKYFPADVKG 122
L +E +A+A++ A WW + +T P G +TW+ F+ +F + P + G
Sbjct: 126 LLQCNEQEKVAFATHQLQGPASIWWDNYM--VTRPTGAEVTWTEFRHSFNKAQVPEGIVG 183
Query: 123 KKETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGH 182
+K+ EF L+QG V +Y F L+++ P T DA K +F GL ++ +
Sbjct: 184 QKKREFRSLQQGTKTVIEYLHEFNRLARYAPEDVRT--DAEKQEKFMSGLDDELTNQLIS 241
Query: 183 QQIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPYSPRNYKPELQNRNY 242
+ F LV D+A R+ + +K N+ KR+ + + + KP +
Sbjct: 242 RDYEDFEKLV---------DKAIRQEEQCNKMNR--KRKAAQFRTPQGKCQKPRYTMGRH 290
Query: 243 GGA--------RPTNPNS----HVTCYRCGKEGHK------SWSCTATTTSGQTNLKPPV 284
GG RP +P S H + E H S A + +P
Sbjct: 291 GGPSTMIIRQHRPYHPGSFNKTHHSDSHNNSEQHSLNPTPSSLKIPAQSVQPALPEQPKR 350
Query: 285 VGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAM------TGAEANTSEDFIQGTCFLCDI 338
+G N G + K +P G F + EA ++ + I GT +
Sbjct: 351 LGEKPELCFNCNKPGHTVGKCPKPRRAGPKFVQARVNHASAEEAQSAPEVILGTFPVNST 410
Query: 339 SLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDR 398
V+L+DSGATHSFIS A + L + +L + V TP T+ C + I+
Sbjct: 411 PAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGG-GMTTTHYCPSVTVEIQGL 469
Query: 399 EYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLR----------VPIFLQKYKEKHTAS 448
+ NL+ L + LD+ILGM+WL+ + ++DC R V IF +K S
Sbjct: 470 IFPANLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEVVIFQSPVPQKPGIS 529
Query: 449 LPEKEPSAYLILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTT 508
L + + K +EDIP+VRE+PEVFP+D+T +PP+R++EF ID++PGT
Sbjct: 530 LNQAAGEGQEVAVEKTTKK---LEDIPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTA 586
Query: 509 PISAAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQL 568
I PYR+ ELAE++KQV+E L KG+IRPS SPWGAP++ V+KKD + R+CVDYR L
Sbjct: 587 SIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSPWGAPIIFVEKKDKTKRMCVDYRAL 646
Query: 569 NKVTIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEY 628
N+VTIKN+YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R++ +D+ KTAF TRYG +E
Sbjct: 647 NEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFEC 706
Query: 629 LVMPFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKD 688
VM FG+TNAPA FM+ MN++F +LDKFV+VFIDDILIYSKS+EEH +H+++VL+ LK+
Sbjct: 707 TVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKE 766
Query: 689 RKLYAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGY 748
+LYAK SKC+FWL++VQFLGH+V+ G+AVDPA VE+V W P TVT VRSFLGLAGY
Sbjct: 767 HQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGY 826
Query: 749 YRRFIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVY 808
YRRFIE FSKIA P+TQL KK+ F+W+ +C SF+ LK RL APVL LPD +KD+ VY
Sbjct: 827 YRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVY 886
Query: 809 CDASKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFT 868
CDAS+ GLGCVLMQ+ KV++YAS+QLRPHE NYPTHD+ELAAVV ALKIWRHYL G +
Sbjct: 887 CDASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCE 946
Query: 869 IYSDHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKSLHAARLM 928
+Y+DH+SLKY+F Q LN+RQRRW+E ++DYD + YHPGKANVVADALSRKS +
Sbjct: 947 VYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSY--CNVA 1004
Query: 929 IEETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMS 988
E E RD+ + + + + L +E+V+ QA D + +
Sbjct: 1005 WVEQLCCEVQRDLEHLNLGIVEHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGK 1064
Query: 989 RPDFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPG 1048
F++ G RLCVPE EL+ IL E H++ +SIHPG+TKMYQDLK+ FWW
Sbjct: 1065 ARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVS 1124
Query: 1049 MKKDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAI 1108
M+++I + V C CQ+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT++GHD+I
Sbjct: 1125 MRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSI 1184
Query: 1109 WVIVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLH 1168
WV+VDRLTK AHFI V+ T+ +KLA +Y+ I+ LHGVP IVSDR +F SKFW L
Sbjct: 1185 WVVVDRLTKVAHFIPVHTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQ 1244
Query: 1169 EALGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHS 1228
E LGTRL+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ G+W+ LP AEFSYNNSY +
Sbjct: 1245 EELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQA 1304
Query: 1229 SLGMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYY 1288
SL MAPFEALYGRRC+TPL W ++ G E+L E EKVR++RE+LRIAQ RQKSY
Sbjct: 1305 SLQMAPFEALYGRRCRTPLFWDQTGERQLFGTEVLNEAEEKVRAVRERLRIAQSRQKSYA 1364
Query: 1289 DKRHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPS 1348
D R + L F+ GD+V+LRVTP+ GV KL P+++GPY+IL+R G VAY++ LP +
Sbjct: 1365 DNRRRELAFETGDYVYLRVTPLRGVHHFQTKGKLAPRFVGPYRILERRGEVAYQLELPSN 1424
Query: 1349 LSNLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLV 1408
+ +H+VFH+SQL+K L PD+IE++E+LTY +P +ILE E++ R + +
Sbjct: 1425 MLGIHNVFHVSQLKKCLRVPEEQASPDHIEIQEDLTYVEKPTRILETSERRTRNKVIRFC 1484
Query: 1409 KLAWS-DDNQDATWELEESARKRYPSLF 1435
K+ WS ++ATWE E+ + +P LF
Sbjct: 1485 KVQWSHHSEEEATWEREDELKATHPHLF 1512
>ref|XP_476280.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|46485886|gb|AAS98511.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1678
Score = 1288 bits (3333), Expect = 0.0
Identities = 680/1466 (46%), Positives = 932/1466 (63%), Gaps = 72/1466 (4%)
Query: 4 QLTNFLANQAARAEQQNQPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYE 63
QL N + Q + Q K + +FL+ PP+F +P A+ WL IE+ +
Sbjct: 239 QLMNMMMQQFQNQQNQGNNHAPPQNK-LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLD 297
Query: 64 SLPTSEDRMIAYASYLFHEEARNWWVHAKSRITPPDGVLTWSIFKEAFLEKYFPADVKGK 123
L ++ +++AS+ H A WW H + T + + TW F AF + + P+ V
Sbjct: 298 LLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAEPI-TWLEFTAAFRKTHIPSGVVSL 356
Query: 124 KETEFLELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQ 183
K+ EF L QG V +Y F L+++ P +D + +F GL ++ +
Sbjct: 357 KKKEFRSLSQGSRSVTEYLHEFNRLARYAPE--DVRNDEERQEKFLGGLNDELSYPLMVG 414
Query: 184 QIRTFTVLVEKCRIFEENDRARREYYKSSKFNKTSKRREERKKPY------------SPR 231
F LV+K + D+ R K + + ++ +KP S
Sbjct: 415 DYPDFQKLVDKA--IRQEDKYNRMEQKKRRIAQFKTQQGNNQKPRLTLGPQPMPQGGSSS 472
Query: 232 NYKPELQ--NRNYGG----------ARPTNP--------NSHVTCYRCGKEGHKSWSCTA 271
+P+ Q N N G A PT N V C+ CG GH + C
Sbjct: 473 VVRPQRQFFNNNAGNNIRNQAPRPVAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCP- 531
Query: 272 TTTSGQTNLKPPVVGGTNTTSAPRNSAGASAQKPGRPVNKGKVFAMTGAEANTSEDFIQG 331
KP V A NS +++ K +V + AEA + D I G
Sbjct: 532 ---------KPRRV---KVVPAQSNSTVSAS--------KARVNHVAAAEAQDAPDVILG 571
Query: 332 TCFLCDISLVVLYDSGATHSFISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKC 391
T + + VL+DSGATHSF+S A + + + L L+V+TP+ + A++
Sbjct: 572 TFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQ-ALSLQRSPSV 630
Query: 392 PLVIEDREYITNLVCLPLEGLDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHTASLPE 451
+ I+ ++ NL+ L + LD+ILGM+WL+ + ++DC R + L Y +
Sbjct: 631 RIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANR-KVTLNSYDGRVVTV--- 686
Query: 452 KEPSAYLILFSSEGTKRPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTTPIS 511
A F + +E+IP+VRE+P+VFP+D+ +PP+R++EF ID++PGTTPI
Sbjct: 687 ---HALSSEFLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIH 743
Query: 512 AAPYRISPLELAELQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKV 571
PYR++ ELAE+++QV++LL KG+IRPS SPWGAPV+ V+KKD + R+CVDYR LN V
Sbjct: 744 TRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDV 803
Query: 572 TIKNRYPLPRIDDLMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVM 631
TIKN YPLPRIDDL DQLKGA VFSKIDLRSGYHQ+R+K +D+ KTAF TRYG +E VM
Sbjct: 804 TIKNEYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVM 863
Query: 632 PFGVTNAPAIFMDYMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKL 691
FG+TNAPA FM+ MN++F YLDKFV+VFIDDILIYS++KEEH EH+++ L+ L++ +L
Sbjct: 864 SFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQL 923
Query: 692 YAKLSKCEFWLEQVQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRR 751
YAK SKCEFWL +V+FLGHV+S G+AVDP+ VE+V +WK P+TV+ +RSFLGLAGYYRR
Sbjct: 924 YAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRR 983
Query: 752 FIEGFSKIATPLTQLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDA 811
FIE FSKIA P+T+L +KD + W+E+CE SFQ LK RL AP+L LPDP K + VYCDA
Sbjct: 984 FIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKKGFQVYCDA 1043
Query: 812 SKSGLGCVLMQERKVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYS 871
SK GLGCVLMQE KV+AYAS+QLRPHE+NYPTHD+ELAAVV ALKIWRHYL+G + +Y+
Sbjct: 1044 SKFGLGCVLMQEGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLFGTRTEVYT 1103
Query: 872 DHQSLKYLFDQKTLNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKS-LHAARLMIE 930
DH+SLKY+F Q LNMRQRRW+E ++DYD + YHPGKANVVADALSRK +A
Sbjct: 1104 DHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQL 1163
Query: 931 ETELIEKFRDMNLIMETLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRP 990
EL ++F +NL + +G + L I++V++ Q D ++Q+
Sbjct: 1164 PLELCKEFERLNL--GIVGRGF-VAALEAKPTLIDQVREAQINDPDIQEIKKKMRRGKAI 1220
Query: 991 DFLKGPDGLWRYQGRLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMK 1050
FL+ G R+CVP+ +L+ IL+E H + +SIHPG+TKMYQDLK+ FWW MK
Sbjct: 1221 GFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMK 1280
Query: 1051 KDIMKKVTSCLTCQKVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWV 1110
++I + V C CQ+VK EHQKP+G LQPL IPEWKWE I MDF++GLPRT++GHD+IWV
Sbjct: 1281 REIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWV 1340
Query: 1111 IVDRLTKSAHFIAVNMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEA 1170
IVDRLTK AHFI V T+ +LA +Y+ IV LHGVP IVSDR +F S FW L E
Sbjct: 1341 IVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEE 1400
Query: 1171 LGTRLSLSSAYHPQSDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSL 1230
+G++L+ S+AYHPQ+DGQ+ER Q LEDMLRAC LD+ GSW+ LP AEF YNNSY +SL
Sbjct: 1401 MGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFLYNNSYQASL 1460
Query: 1231 GMAPFEALYGRRCKTPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDK 1290
MAP+EALYGR+C+TPL W ++ G ++L+E EKV+ I+E+LR+AQ R KSY D
Sbjct: 1461 QMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADN 1520
Query: 1291 RHKPLEFQEGDHVFLRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLS 1350
R + L F+EGD+V+LRVTP+ GV R KL P+++GPY+I+ R G VAY++ LP SL+
Sbjct: 1521 RRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLA 1580
Query: 1351 NLHDVFHISQLRKYLPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLVKL 1410
+H+VFH+SQL+K L + + IE++E+LTY +P++ILE E++ R R + K+
Sbjct: 1581 GVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKV 1640
Query: 1411 AWSD-DNQDATWELEESARKRYPSLF 1435
WS+ +++TWE E+ + +P LF
Sbjct: 1641 QWSNHSEEESTWEREDELKSAHPYLF 1666
>ref|NP_908336.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|52353682|gb|AAU44248.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|52353613|gb|AAU44179.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|20804440|dbj|BAB92137.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|15128451|dbj|BAB62635.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1524
Score = 1288 bits (3332), Expect = 0.0
Identities = 687/1452 (47%), Positives = 921/1452 (63%), Gaps = 40/1452 (2%)
Query: 12 QAARAEQQN-QPAEDDVYKGIDKFLKRNPPLFDGGYDPEGANRWLRKIEQIYESLPTSED 70
Q A+ +QQN Q + +FL+ PP F +P A+ WL IE+ L +E
Sbjct: 73 QQAQLQQQNLQFGSPPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQ 132
Query: 71 RMIAYASYLFHEEARNWWVHAKSRITPPDGV-LTWSIFKEAFLEKYFPADVKGKKETEFL 129
+A+A++ A WW + +T P G +TW+ F+ +F + P + +K+ EF
Sbjct: 133 EKVAFATHQLQGPASIWWDNYM--VTRPAGAEVTWTEFRHSFNKAQVPEGIVAQKKREFR 190
Query: 130 ELKQGEMFVGQYAARFEELSQFHPYYGTTADDASKCIRFECGLRPDIRAAIGHQQIRTFT 189
L+QG V +Y F L+++ P T DA + +F GL ++ + + F
Sbjct: 191 SLQQGTRTVIEYLHEFNLLARYAPEDVRT--DAERQEKFLSGLDDELTNQLISRDYEDFE 248
Query: 190 VLVEKCRIFEENDRARREYYKSSKFN----KTSKRREERKKPYSP--------RNYKPEL 237
LV+K EE+ K+++F K+ K R + P R Y P
Sbjct: 249 KLVDKAIRQEEHCNKINRKRKAAQFRTPQGKSQKPRFTMGRHGGPSTMIIRQHRPYHPGS 308
Query: 238 QNRNYGGARPTNPNSHVTCYRCGKEGHKSWSCTATTTSGQTNLKPPVVGGTNTTSAPRNS 297
N+N+ N H S A + +P +G N
Sbjct: 309 FNKNHHNGSHNNSEQHSL-----NPTPSSLKIPAQSVQPALPEQPKRLGEKPELCFNCNK 363
Query: 298 AGASAQKPGRPVNKGKVFAM------TGAEANTSEDFIQGTCFLCDISLVVLYDSGATHS 351
G + K +P G F + EA ++ + I GT + V+L+DSGATHS
Sbjct: 364 PGHTVGKCPKPRRAGPKFVQARVNHASAEEAQSAPEVILGTFPVNSTPAVILFDSGATHS 423
Query: 352 FISHERAKSLKLVITQLPYDLVVTTPTKESAVTSSVCKKCPLVIEDREYITNLVCLPLEG 411
FIS A + L + +L + V TP T+ C + I+ + NL+ L +
Sbjct: 424 FISKRFAGAHGLSLVKLKIPMRVHTPGG-GMTTTHYCPSVTVEIQGLIFPANLILLESKD 482
Query: 412 LDIILGMNWLSINNVLLDCRLRVPIFLQKYKEKHT-ASLPEKEPSAYLILFSSEGTK--- 467
LD+ILGM+WL+ + ++DC R E T SL ++P L + E +
Sbjct: 483 LDVILGMDWLTRHRGVIDCASRTIKLTNAKGEVVTFQSLVPRKPGISLNQAAGEEQEVAV 542
Query: 468 ---RPAMEDIPVVREFPEVFPEDMTELPPEREVEFAIDVIPGTTPISAAPYRISPLELAE 524
+EDIP+VRE+PEVFP+D+T +PP+R++EF ID++PGT PI PYR+ ELAE
Sbjct: 543 EKTTKKLEDIPIVREYPEVFPDDLTTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAE 602
Query: 525 LQKQVEELLSKGFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKNRYPLPRIDD 584
++KQV+E L KG+IRPS SPWGAPV+ V+KKD + R+CVDYR LN+VTIKN+YPLPRIDD
Sbjct: 603 VKKQVDEQLQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDD 662
Query: 585 LMDQLKGARVFSKIDLRSGYHQIRVKSDDVQKTAFRTRYGHYEYLVMPFGVTNAPAIFMD 644
L DQLKGA VFSKIDLRSGYHQ+R++ +D+ KTAF TRYG +E VM FG+TNAPA FM+
Sbjct: 663 LFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMN 722
Query: 645 YMNRIFHPYLDKFVIVFIDDILIYSKSKEEHVEHMQVVLKVLKDRKLYAKLSKCEFWLEQ 704
MN++F +LDKFV+VFIDDILIYSKS+EEH +H+++VL+ LK+ +LYAK SKC+FWL++
Sbjct: 723 LMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKE 782
Query: 705 VQFLGHVVSEDGIAVDPAKVEAVNSWKVPETVTGVRSFLGLAGYYRRFIEGFSKIATPLT 764
VQFLGH+V+ G+AVDPA VE+V W P TVT VRSFLGLAGYYRRFIE FSKIA P+T
Sbjct: 783 VQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMT 842
Query: 765 QLTKKDHPFVWTEKCE*SFQTLKERLTKAPVLTLPDPSKDYDVYCDASKSGLGCVLMQER 824
QL KK+ F+W+ +C SF+ LK RL APVL LPD +KD+ VYCDAS+ GLGCVLMQ+
Sbjct: 843 QLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDG 902
Query: 825 KVIAYASQQLRPHEQNYPTHDMELAAVVFALKIWRHYLYGVKFTIYSDHQSLKYLFDQKT 884
KV++YAS+QLRPHE NYPTHD+ELAAVV ALKIWRHYL G + +Y+DH+SLKY+F Q
Sbjct: 903 KVVSYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPD 962
Query: 885 LNMRQRRWVEFLEDYDFKLQYHPGKANVVADALSRKSLHAARLMIEETELIEKFRDMNLI 944
LN+RQRRW+E ++DYD + YHPGKANVVADALSRKS + E E RD+ +
Sbjct: 963 LNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSY--CNVAWVEQLCGEVQRDLEHL 1020
Query: 945 METLPQGTRLGTLTLTNEFIEEVKKEQARDENLQKEAHGRDSMSRPDFLKGPDGLWRYQG 1004
+ + + L +E+V+ QA D + + F++ G
Sbjct: 1021 NLGIVEHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGE 1080
Query: 1005 RLCVPEGGELRQKILEEGHKSDFSIHPGTTKMYQDLKKMFWWPGMKKDIMKKVTSCLTCQ 1064
RLCVPE EL+ IL E H++ +SIHPG+TKMYQDLK+ FWW M+++I + V C CQ
Sbjct: 1081 RLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQ 1140
Query: 1065 KVKGEHQKPSGSLQPLSIPEWKWEGISMDFVSGLPRTTTGHDAIWVIVDRLTKSAHFIAV 1124
+VK EHQ+P+G LQPL IPEWKWE I MDF++GLPRT++GHD+IWV+VDRLTK AHFI V
Sbjct: 1141 RVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPV 1200
Query: 1125 NMTFPSEKLARIYVKEIVRLHGVPANIVSDRDPRFVSKFWGSLHEALGTRLSLSSAYHPQ 1184
+ T+ +KLA +Y+ I+ LHGVP IVSDR +F SKFW L E LGTRL+ S+AYHPQ
Sbjct: 1201 HTTYSGKKLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQ 1260
Query: 1185 SDGQSERTIQTLEDMLRACVLDYKGSWEDFLPLAEFSYNNSYHSSLGMAPFEALYGRRCK 1244
+DGQ+ER Q LEDMLRAC LD+ G+W+ LP AEFSYNNSY +SL MAPFEALYGRRC+
Sbjct: 1261 TDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGRRCR 1320
Query: 1245 TPLCWLSGEDKITLGPELLQEMTEKVRSIREKLRIAQDRQKSYYDKRHKPLEFQEGDHVF 1304
TPL W ++ G E+L E EKVR++RE+LRIAQ RQKSY D R + L FQ GD+V+
Sbjct: 1321 TPLFWDQTGERQLFGTEVLNEAEEKVRAVRERLRIAQSRQKSYADNRRRELVFQVGDYVY 1380
Query: 1305 LRVTPITGVGRSIHSKKLTPKYLGPYQILDRIGAVAYRIALPPSLSNLHDVFHISQLRKY 1364
LRVTP+ GV R KL P+++GPY+IL+R G VAY++ LP ++ +H+VFH+SQL+K
Sbjct: 1381 LRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPSNMLGIHNVFHVSQLKKC 1440
Query: 1365 LPDSSHVIEPDNIELEENLTYPTQPVKILERREKQLRKRTVPLVKLAWS-DDNQDATWEL 1423
L PD IE++E+LTY +P +ILE E++ R + + K+ WS ++ATWE
Sbjct: 1441 LRVPEEQASPDQIEIQEDLTYVEKPTRILETSERKTRNKVIRFCKVQWSHHSEEEATWER 1500
Query: 1424 EESARKRYPSLF 1435
E+ + +P LF
Sbjct: 1501 EDELKATHPHLF 1512
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,542,488,560
Number of Sequences: 2540612
Number of extensions: 112924338
Number of successful extensions: 410112
Number of sequences better than 10.0: 36084
Number of HSP's better than 10.0 without gapping: 3083
Number of HSP's successfully gapped in prelim test: 33002
Number of HSP's that attempted gapping in prelim test: 325126
Number of HSP's gapped (non-prelim): 54800
length of query: 1435
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1294
effective length of database: 505,134,102
effective search space: 653643527988
effective search space used: 653643527988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0039.4