BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0031.3
(547 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 526 e-148
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 505 e-141
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 505 e-141
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 499 e-140
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 487 e-136
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 485 e-135
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 484 e-135
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 481 e-134
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 468 e-130
dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cu... 468 e-130
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 465 e-129
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar... 457 e-127
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 455 e-126
ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica c... 446 e-123
ref|NP_916487.1| helicase-like protein [Oryza sativa (japonica c... 446 e-123
gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), ... 444 e-123
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa... 438 e-121
ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica c... 437 e-121
ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica c... 436 e-121
ref|NP_912739.1| unnamed protein product [Oryza sativa (japonica... 436 e-121
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 526 bits (1354), Expect = e-148
Identities = 272/550 (49%), Positives = 367/550 (66%), Gaps = 13/550 (2%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
D+++QN ++EIEK+L+ + +L+ + +PYP+ + + DEL Y+R + H
Sbjct: 761 DDQIQNQALLEIEKLLRNSGSTLRNYESMPYPENNNFPAAMNTLIQDELCYDRHACAQDH 820
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
S LT EQ Y +++ V S++ FF+ GFGGTGKT++W L +RSRG IVLN
Sbjct: 821 LRLFSKLTVEQRKIYDQIIEAVYSNSGGVFFVNGFGGTGKTYLWKTLSTYIRSRGEIVLN 880
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSG+A+LLL G RTAHSRF+IP+ +NE STC++ S A LL +A LIIWDEAPML+
Sbjct: 881 VASSGMAALLLDGGRTAHSRFAIPLQVNETSTCSISPDSDLASLLLRAKLIIWDEAPMLH 940
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+HC EALDR+L DI++ + PFGGK + G DF QILPVI+KGSR +I+ +++ S
Sbjct: 941 RHCYEALDRTLKDIVQADNHK----PFGGKTITFGGDFRQILPVITKGSREQIIHASLTS 996
Query: 241 SYLWKHCKVMKLTVNMSLQNATSTSSATE---IKEFVDWLLQVGDGTVKTIDEEETLIEI 297
S LW CKV+ LT NM L T+ TE IKEF DW+L++GDG + ++ E I+I
Sbjct: 997 SRLWNSCKVLTLTKNMRL-----TADPTEKDNIKEFSDWILKLGDGKLSEPNDGEAAIDI 1051
Query: 298 PPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPG 357
P D+L+ P+ + N YP L NL +FF+ERAIL PT + + E+NN ++ ++PG
Sbjct: 1052 PEDMLLLDSLHPIDSIANCVYPNLLQNLNDQTFFRERAILCPTNDDVSEVNNHIMDLLPG 1111
Query: 358 DETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQA 417
+ EY S D C D +A ++E LN KCS +PNH ++LK GVP+MLIRN+DQ
Sbjct: 1112 EVKEYFSSDKICDFDTSVERDAN-MSTEFLNAIKCSGVPNHVLRLKLGVPVMLIRNLDQK 1170
Query: 418 AGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTL 477
GLCNGTR+ V L +I VL + G ++PR+ LTP++ IPF+FQRRQF V
Sbjct: 1171 YGLCNGTRLQVTQLGDRVIEAKVLTGSNAGNKVYLPRLVLTPADFRIPFRFQRRQFPVVP 1230
Query: 478 CFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTTR 537
CF MTINKSQGQSLSHVG+YLPRPVF+HGQ YVA+ RVKSR+ LK+LIID+E TT
Sbjct: 1231 CFGMTINKSQGQSLSHVGIYLPRPVFSHGQLYVAVSRVKSRRGLKILIIDEEGNRGKTTT 1290
Query: 538 NVVYQEVLDN 547
NVV++EV N
Sbjct: 1291 NVVFKEVFQN 1300
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 505 bits (1301), Expect = e-141
Identities = 267/551 (48%), Positives = 366/551 (65%), Gaps = 10/551 (1%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYN-RAEMVKI 59
+ ++QN + EIEKI+ N +L++ P P I N + + DEL YN ++++ K
Sbjct: 883 EAQIQNYTLQEIEKIMLFNGATLEDIEHFPKPSREGIDNSNRLII-DELRYNNQSDLKKK 941
Query: 60 HDEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVL 119
H +++ LT EQ Y + + V +D FF+YGFGGTGKTF+W L AA+RS+G I L
Sbjct: 942 HSDWIQKLTPEQRGIYDQITNAVFNDLGGVFFVYGFGGTGKTFIWKTLAAAVRSKGQICL 1001
Query: 120 NVASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPML 179
NVASSGIASLLL G RTAHSRFSIP++ +E S C ++ S A+L+K+ASLIIWDEAPM+
Sbjct: 1002 NVASSGIASLLLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMM 1061
Query: 180 NKHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAIN 239
+K C EALD+S +DI+K FGGKV+V G DF Q+LPVI+ R+EIV S++N
Sbjct: 1062 SKFCFEALDKSFSDIIKRVDNK----VFGGKVMVFGGDFRQVLPVINGAGRAEIVMSSLN 1117
Query: 240 SSYLWKHCKVMKLTVNMS-LQNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEETLIEIP 298
+SYLW HCKV++LT NM L N S A EI+EF DWLL VGDG V ++ E +I+IP
Sbjct: 1118 ASYLWDHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIP 1177
Query: 299 PDLLIEQCKEPLLELVNFAY--PKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIP 356
+LLI++ P+ + Y P H + FFQ RAILAP E + IN +ML +
Sbjct: 1178 EELLIQEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLD 1237
Query: 357 GDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQ 416
+E YLS D+ SD DS N T + LN K S +P+H+++LK G P+ML+RN+D
Sbjct: 1238 SEERIYLSADSIDPSDSDSLKNPV-ITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDP 1296
Query: 417 AAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVT 476
GLCNGTR+ + L +I+ V+ +++G+ +IP +++TPS++ +PFK +RRQF ++
Sbjct: 1297 KGGLCNGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLS 1356
Query: 477 LCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTT 536
+ FVMTINKSQGQSL VGLYLP+PVF+HGQ YVAL RV S+ LK+LI+D E + T
Sbjct: 1357 VAFVMTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQT 1416
Query: 537 RNVVYQEVLDN 547
NVV++EV N
Sbjct: 1417 TNVVFKEVFQN 1427
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 505 bits (1301), Expect = e-141
Identities = 267/551 (48%), Positives = 366/551 (65%), Gaps = 10/551 (1%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYN-RAEMVKI 59
+ ++QN + EIEKI+ N +L++ P P I N + + DEL YN ++++ K
Sbjct: 874 EAQIQNYTLQEIEKIMLFNGATLEDIEHFPKPSREGIDNSNRLII-DELRYNNQSDLKKK 932
Query: 60 HDEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVL 119
H +++ LT EQ Y + + V +D FF+YGFGGTGKTF+W L AA+RS+G I L
Sbjct: 933 HSDWIQKLTPEQRGIYDQITNAVFNDLGGVFFVYGFGGTGKTFIWKTLAAAVRSKGQICL 992
Query: 120 NVASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPML 179
NVASSGIASLLL G RTAHSRFSIP++ +E S C ++ S A+L+K+ASLIIWDEAPM+
Sbjct: 993 NVASSGIASLLLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMM 1052
Query: 180 NKHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAIN 239
+K C EALD+S +DI+K FGGKV+V G DF Q+LPVI+ R+EIV S++N
Sbjct: 1053 SKFCFEALDKSFSDIIKRVDNK----VFGGKVMVFGGDFRQVLPVINGAGRAEIVMSSLN 1108
Query: 240 SSYLWKHCKVMKLTVNMS-LQNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEETLIEIP 298
+SYLW HCKV++LT NM L N S A EI+EF DWLL VGDG V ++ E +I+IP
Sbjct: 1109 ASYLWDHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIP 1168
Query: 299 PDLLIEQCKEPLLELVNFAY--PKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIP 356
+LLI++ P+ + Y P H + FFQ RAILAP E + IN +ML +
Sbjct: 1169 EELLIQEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLD 1228
Query: 357 GDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQ 416
+E YLS D+ SD DS N T + LN K S +P+H+++LK G P+ML+RN+D
Sbjct: 1229 SEERIYLSADSIDPSDSDSLKNPV-ITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDP 1287
Query: 417 AAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVT 476
GLCNGTR+ + L +I+ V+ +++G+ +IP +++TPS++ +PFK +RRQF ++
Sbjct: 1288 KGGLCNGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLS 1347
Query: 477 LCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTT 536
+ FVMTINKSQGQSL VGLYLP+PVF+HGQ YVAL RV S+ LK+LI+D E + T
Sbjct: 1348 VAFVMTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQT 1407
Query: 537 RNVVYQEVLDN 547
NVV++EV N
Sbjct: 1408 TNVVFKEVFQN 1418
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 499 bits (1285), Expect = e-140
Identities = 268/549 (48%), Positives = 359/549 (64%), Gaps = 10/549 (1%)
Query: 3 ELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYN-RAEMVKIHD 61
E++N + EIEKI+ N +LKE P P I N + V DEL YN + + + HD
Sbjct: 1208 EIRNYTLQEIEKIMLRNGATLKEIQDFPQPSREGIDNSNRL-VVDELRYNIDSNLKEKHD 1266
Query: 62 EFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNV 121
E+ L +EQ Y + V +D FF+YGFGGTGKTF+W L AA+RSRG IVLNV
Sbjct: 1267 EWFQMLNTEQRGIYDEITGAVFNDLGGVFFIYGFGGTGKTFIWKTLAAAVRSRGQIVLNV 1326
Query: 122 ASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNK 181
ASSGIASLLL G RTAHSRF+IP++ +E S C + S A L+K+ASLIIWDEAPM++K
Sbjct: 1327 ASSGIASLLLEGGRTAHSRFAIPLNPDEFSVCKITPKSDLANLIKEASLIIWDEAPMMSK 1386
Query: 182 HCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSS 241
C E+LD+S DI+ + FGGKVVV G DF Q+LPVI+ R EIV S++N+S
Sbjct: 1387 FCFESLDKSFYDILNNKDNK----VFGGKVVVFGGDFRQVLPVINGAGRVEIVMSSLNAS 1442
Query: 242 YLWKHCKVMKLTVNMS-LQNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEETLIEIPPD 300
YLW HCKV+KLT NM L S+ A EI++F DWLL VGDG + ++ E LI+IP +
Sbjct: 1443 YLWDHCKVLKLTKNMRLLSGGLSSEEAKEIQQFSDWLLAVGDGRINEPNDGEALIDIPEE 1502
Query: 301 LLIEQCKEPLLELVNFAY--PKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGD 358
LLI++ P+ + Y P H + FFQ RAILAPT E + IN +ML + +
Sbjct: 1503 LLIKEAGNPIEAISKEIYGDPSELHMINDPKFFQRRAILAPTNEDVNTINQYMLEHLKSE 1562
Query: 359 ETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAA 418
E YLS D+ +D DS N T + LN + + +P+HA++LK G P+ML+RN+D
Sbjct: 1563 ERIYLSADSIDPTDSDSLANPV-ITPDFLNSIQLTGMPHHALRLKVGAPVMLLRNLDPKG 1621
Query: 419 GLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLC 478
GLCNGTR+ + L K ++ V+ +++G+ IP ++LTPS++ +PFK +RRQF +++
Sbjct: 1622 GLCNGTRLQITQLAKQVVQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVA 1681
Query: 479 FVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTTRN 538
F MTINKSQGQSL VGLYLP+PVF+HGQ YVAL RV S+K LK+LI+D + + T N
Sbjct: 1682 FAMTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTN 1741
Query: 539 VVYQEVLDN 547
VV++EV N
Sbjct: 1742 VVFKEVFQN 1750
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 487 bits (1254), Expect = e-136
Identities = 244/545 (44%), Positives = 355/545 (64%), Gaps = 2/545 (0%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
+++ + +IEIEK+++ ++L+E+P + PK +E+ + +E++Y++ + + H
Sbjct: 1090 EQQKKGHALIEIEKLMRQAGKTLEEYPDIELPKCAELRELGNRLLNEEMSYDKDKQKEEH 1149
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
D L +EQ++ + ++++ F+ G+GGTGKT++W + LRS G IVL
Sbjct: 1150 DSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGYGGTGKTYLWRAITTKLRSEGKIVLT 1209
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VAS GIA+LLL G RTAHSRF IP+ + E STC+++QGS AELLKK SLI+WDEAPM N
Sbjct: 1210 VASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSLILWDEAPMAN 1269
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDRSL DI++++ PFGG VVLG DF QILPV+ KG R++IV ++I
Sbjct: 1270 RICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNASIKR 1329
Query: 241 SYLWKHCKVMKLTVNMSLQNATSTSSATE-IKEFVDWLLQVGDGTVKTIDEEETLIEIPP 299
SYLW+H + KLT NM L + + +F W+L +GDG + D EE IEIP
Sbjct: 1330 SYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSADGEEW-IEIPD 1388
Query: 300 DLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGDE 359
DL++++ +P E+V YP L N +K F ++RAIL P E+ EIN F++ MI G+E
Sbjct: 1389 DLILKKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETAREINEFIMNMIEGEE 1448
Query: 360 TEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAAG 419
YLSCDT CK+ + + + +E LN +PNH +KLK G+P+ML+RNI+Q++G
Sbjct: 1449 ITYLSCDTVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKVGLPVMLLRNINQSSG 1508
Query: 420 LCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLCF 479
LCNGTRM + L K I ++ +GE +IPR+ +TP+ S PF +RRQ+ +++CF
Sbjct: 1509 LCNGTRMTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCF 1568
Query: 480 VMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTTRNV 539
MTINKSQGQSL+ VGLYLP+ VFTHGQ YVA RV R L++++ D+E + RN+
Sbjct: 1569 AMTINKSQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNI 1628
Query: 540 VYQEV 544
VY+E+
Sbjct: 1629 VYKEI 1633
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 485 bits (1249), Expect = e-135
Identities = 243/545 (44%), Positives = 355/545 (64%), Gaps = 2/545 (0%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
+++ + +IEIEK+++ ++L+E+P + PK +E+ + +E++Y++ + + H
Sbjct: 981 EQQKKGHALIEIEKLMRQAGKTLEEYPDIELPKCAELRELGNRLLNEEMSYDKDKQKEEH 1040
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
D L +EQ++ + ++++ F+ G+GGTGKT++W + LRS G IVL
Sbjct: 1041 DSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGYGGTGKTYLWRAITTKLRSEGKIVLT 1100
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VAS GIA+LLL G RTAHSRF IP+ + E STC+++QGS AELLKK SLI+WDEAPM N
Sbjct: 1101 VASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSLILWDEAPMAN 1160
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDRSL DI++++ PFGG VVLG DF QILPV+ KG R++IV ++I
Sbjct: 1161 RICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNASIKR 1220
Query: 241 SYLWKHCKVMKLTVNMSLQNATSTSSATE-IKEFVDWLLQVGDGTVKTIDEEETLIEIPP 299
SYLW+H + KLT NM L + + +F W+L +GDG + D EE IEIP
Sbjct: 1221 SYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSADGEEW-IEIPD 1279
Query: 300 DLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGDE 359
DL++++ +P E+V YP L N +K F ++RAIL P E+ +IN F++ MI G+E
Sbjct: 1280 DLILKKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETARKINEFIMNMIEGEE 1339
Query: 360 TEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAAG 419
YLSCDT CK+ + + + +E LN +PNH +KLK G+P+ML+RNI+Q++G
Sbjct: 1340 ITYLSCDTVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKLGLPVMLLRNINQSSG 1399
Query: 420 LCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLCF 479
LCNGTRM + L K I ++ +GE +IPR+ +TP+ S PF +RRQ+ +++CF
Sbjct: 1400 LCNGTRMTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCF 1459
Query: 480 VMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTTRNV 539
MTINKSQGQSL+ VGLYLP+ VFTHGQ YVA RV R L++++ D+E + RN+
Sbjct: 1460 AMTINKSQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNI 1519
Query: 540 VYQEV 544
VY+E+
Sbjct: 1520 VYKEI 1524
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 484 bits (1245), Expect = e-135
Identities = 261/551 (47%), Positives = 361/551 (65%), Gaps = 11/551 (1%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
D E +N ++EIE +L N +L++F +P P E + F+ +E NYN ++ + H
Sbjct: 553 DAERRNYALLEIEDMLLCNGSTLQDFKDMPKPT-KEGTDHSNRFITEEKNYNIEKLREDH 611
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
D++ + +TSEQ+ Y ++ VL ++ FF+YGFGGT KTF+W L AA+R RGLI +N
Sbjct: 612 DDWFNKMTSEQKGIYDEIIKAVLENSGGIFFVYGFGGTSKTFMWKTLSAAVRMRGLISVN 671
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSGIASLLL G RTAHSRF IPI+ ++ +TC++ S A +LK+ASLIIWDEAPM++
Sbjct: 672 VASSGIASLLLQGGRTAHSRFGIPINPDDFTTCHIVPNSDLANMLKEASLIIWDEAPMMS 731
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
++C E+LDRSLND++ PFGGKVVV G DF Q+LPVI R+EIV +A+NS
Sbjct: 732 RYCFESLDRSLNDVIGNIDGK----PFGGKVVVFGGDFRQVLPVIHGAGRAEIVLAALNS 787
Query: 241 SYLWKHCKVMKLTVNMSL-QNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEETLIEIPP 299
SYLW+HCKV+ LT NM L N A EIKEF +WLL VGDG V ++ E LI+IP
Sbjct: 788 SYLWEHCKVLTLTKNMRLMSNDLDKDEAEEIKEFSNWLLAVGDGRVSEPNDGEVLIDIPE 847
Query: 300 DLLIEQCKEPLLELVNFAYPKLAHNLQKSS---FFQERAILAPTLESLEEINNFMLAMIP 356
+LLI+ +P+ + Y L LQ ++ FFQ+RAIL P + IN+ ML +
Sbjct: 848 ELLIKDANDPIEAITKAVYGDL-DLLQPNNDPKFFQQRAILCPRNTDVNTINDIMLDKLN 906
Query: 357 GDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQ 416
G+ YLS D+ D S +N T + LN K S +PNH + LK G P+ML+RNID
Sbjct: 907 GELVTYLSADSIDPQDAASLNNPV-LTPDFLNSIKLSGLPNHNLTLKIGTPVMLLRNIDP 965
Query: 417 AAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVT 476
GLCNGTR+ V + +I+ V+ +++G+ I + ++PS++ +PF+ +RRQF +
Sbjct: 966 KGGLCNGTRLQVTQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIA 1025
Query: 477 LCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTT 536
+ F MTINKSQGQSL VG+YLP+PVF+HGQ YVAL RV S+K LK+LI+D E + T
Sbjct: 1026 VAFAMTINKSQGQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQT 1085
Query: 537 RNVVYQEVLDN 547
NVV++E+ N
Sbjct: 1086 MNVVFKEIFQN 1096
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 481 bits (1239), Expect = e-134
Identities = 246/518 (47%), Positives = 343/518 (65%), Gaps = 6/518 (1%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
DEE Q C+ EI ++L N SL ++ +P + F+ DE Y+RA +++ H
Sbjct: 479 DEERQQYCLQEIARLLTKNGVSLSKWKQMPQISDEHVEKCNH-FILDERKYDRAYLIEKH 537
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
+E+++ +TSEQ+ Y ++D VL D FF+YGFGGTGKTF+W +L AA+RS+G I LN
Sbjct: 538 EEWLTMVTSEQKKIYDEIMDAVLHDRGGVFFVYGFGGTGKTFLWKLLSAAIRSKGDISLN 597
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSGIA+LLL G RT HSRF IPI+ NE STCN+ +GS EL+K+A+LIIWDE PM++
Sbjct: 598 VASSGIAALLLDGGRTTHSRFGIPINPNESSTCNISRGSDLGELVKEANLIIWDETPMMS 657
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
KHC E+LDR+L DIM D PFGGK +V G DF Q+LPVI+ R EIV +A+NS
Sbjct: 658 KHCFESLDRTLRDIMNNPG----DKPFGGKGIVFGGDFRQVLPVINGAGREEIVFAALNS 713
Query: 241 SYLWKHCKVMKLTVNMSLQNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEETLIEIPPD 300
SY+W+HCKV++LT NM L S +I+ F W+L VGDG + ++ LI+IP +
Sbjct: 714 SYIWEHCKVLELTKNMRLLANISEHEKRDIEYFSKWILDVGDGKISQPNDGIALIDIPEE 773
Query: 301 LLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGDET 360
LI +P+ ++ Y + FFQ RAIL PT E + IN M++M+ G+E
Sbjct: 774 FLINGDNDPVESIIEAVYGNTFMEEKDPKFFQGRAILCPTNEDVNSINEHMMSMLDGEER 833
Query: 361 EYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAAGL 420
YLS D+ +D S +N + ++++ LN + S +PNH ++LK G P+ML+RN+D GL
Sbjct: 834 IYLSSDSIDPADTSSANN-DAYSADFLNSVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGL 892
Query: 421 CNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLCFV 480
CNGTR+ V + +I + N++G+ IPRM +TPS++ +PFK +RRQF +++ F
Sbjct: 893 CNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFA 952
Query: 481 MTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSR 518
MTINKSQGQ+L VGLYLPRPVF+HGQ YVA+ RV S+
Sbjct: 953 MTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSK 990
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 468 bits (1203), Expect = e-130
Identities = 251/550 (45%), Positives = 352/550 (63%), Gaps = 6/550 (1%)
Query: 2 EELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIHD 61
+ L +L + E+ + ++ ++ LP F V +EL + A +
Sbjct: 891 DRLLSLLIKELHSAFANSGGNIDDYD-LPRSTIHSDDEFGNRMVNEELALDTAALAAHAS 949
Query: 62 EFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNV 121
+ L SEQ+ F+ ++ V FFF+YG GGTGKTF+WN+L + +RS G IVL V
Sbjct: 950 LMIPRLNSEQQNFFDTIVSRVSESRPGFFFVYGHGGTGKTFLWNVLISKIRSEGNIVLAV 1009
Query: 122 ASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNK 181
ASSG+ASLLLP RTAHSRF IPI I+E S C++++G+ AEL++K SLIIWDEAPM ++
Sbjct: 1010 ASSGVASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTHR 1069
Query: 182 HCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSS 241
C EALDR+L D++ + +PFGGK VVLG DF QILPVI KG+R+ IV ++I +S
Sbjct: 1070 RCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTRNSIVDASITNS 1129
Query: 242 YLWKHCKVMKLTVNMSL-QNATSTSSATEIKEFVDWLLQVGDGTV---KTIDEEE-TLIE 296
LW+H ++KLTVNM L Q+ S ++++F W+L +GDG + K IDE E T I+
Sbjct: 1130 PLWQHVVLLKLTVNMRLFQSGLSEGRRHDLEQFARWVLALGDGMLPVSKRIDESEATWID 1189
Query: 297 IPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIP 356
IP DLLI + + +VN +P H SS+ RAI+ P +++EIN++M+AMIP
Sbjct: 1190 IPDDLLIRASDDKIYSIVNEVFPCYVHRYTDSSYLASRAIVCPNNSTVDEINDYMVAMIP 1249
Query: 357 GDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQ 416
G+ EYLSCDT K+ E D + +E LN + P H + LK G +ML+RN++Q
Sbjct: 1250 GEMKEYLSCDTISKTSEHIPDFDILYPTEFLNSINANNFPTHRLALKKGATVMLLRNLNQ 1309
Query: 417 AAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVT 476
+ GLCNGTR++V +L ++ +L + +GE FIPR+ L+ ++S PF QRRQF V
Sbjct: 1310 SLGLCNGTRLLVLSLGHRLLECVILTGSNVGERAFIPRIVLSTTSSKWPFVLQRRQFPVR 1369
Query: 477 LCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTT 536
+C+ MTINKSQGQ+LS VG+YL + VFTHGQ YVA+ R SR L++LI DD+ S+ T
Sbjct: 1370 VCYAMTINKSQGQTLSRVGVYLKKAVFTHGQLYVAVSRSTSRDGLRILIKDDDGACSSKT 1429
Query: 537 RNVVYQEVLD 546
RNVVY EVL+
Sbjct: 1430 RNVVYHEVLE 1439
>dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1652
Score = 468 bits (1203), Expect = e-130
Identities = 251/550 (45%), Positives = 352/550 (63%), Gaps = 6/550 (1%)
Query: 2 EELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIHD 61
+ L +L + E+ + ++ ++ LP F V +EL + A +
Sbjct: 1090 DRLLSLLIKELHSAFANSGGNIDDYD-LPRSTIHSDDEFGNRMVNEELALDTAALAAHAS 1148
Query: 62 EFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNV 121
+ L SEQ+ F+ ++ V FFF+YG GGTGKTF+WN+L + +RS G IVL V
Sbjct: 1149 LMIPRLNSEQQNFFDTIVSRVSESRPGFFFVYGHGGTGKTFLWNVLISKIRSEGNIVLAV 1208
Query: 122 ASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNK 181
ASSG+ASLLLP RTAHSRF IPI I+E S C++++G+ AEL++K SLIIWDEAPM ++
Sbjct: 1209 ASSGVASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTHR 1268
Query: 182 HCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSS 241
C EALDR+L D++ + +PFGGK VVLG DF QILPVI KG+R+ IV ++I +S
Sbjct: 1269 RCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTRNSIVDASITNS 1328
Query: 242 YLWKHCKVMKLTVNMSL-QNATSTSSATEIKEFVDWLLQVGDGTV---KTIDEEE-TLIE 296
LW+H ++KLTVNM L Q+ S ++++F W+L +GDG + K IDE E T I+
Sbjct: 1329 PLWQHVVLLKLTVNMRLFQSGLSEGRRHDLEQFARWVLALGDGMLPVSKRIDESEATWID 1388
Query: 297 IPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIP 356
IP DLLI + + +VN +P H SS+ RAI+ P +++EIN++M+AMIP
Sbjct: 1389 IPDDLLIRASDDKIYSIVNEVFPCYVHRYTDSSYLASRAIVCPNNSTVDEINDYMVAMIP 1448
Query: 357 GDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQ 416
G+ EYLSCDT K+ E D + +E LN + P H + LK G +ML+RN++Q
Sbjct: 1449 GEMKEYLSCDTISKTSEHIPDFDILYPTEFLNSINANNFPTHRLALKKGATVMLLRNLNQ 1508
Query: 417 AAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVT 476
+ GLCNGTR++V +L ++ +L + +GE FIPR+ L+ ++S PF QRRQF V
Sbjct: 1509 SLGLCNGTRLLVLSLGHRLLECVILTGSNVGERAFIPRIVLSTTSSKWPFVLQRRQFPVR 1568
Query: 477 LCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTT 536
+C+ MTINKSQGQ+LS VG+YL + VFTHGQ YVA+ R SR L++LI DD+ S+ T
Sbjct: 1569 VCYAMTINKSQGQTLSRVGVYLKKAVFTHGQLYVAVSRSTSRDGLRILIKDDDGACSSKT 1628
Query: 537 RNVVYQEVLD 546
RNVVY EVL+
Sbjct: 1629 RNVVYHEVLE 1638
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 465 bits (1197), Expect = e-129
Identities = 249/515 (48%), Positives = 335/515 (64%), Gaps = 13/515 (2%)
Query: 19 NERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKI-HDEFVSSLTSEQEIFYKN 77
N + EFP P I N + V +EL YNR +K H+E+ LT EQ Y
Sbjct: 757 NPEDIDEFP---KPTIDGIDNSNRLIV-EELRYNRESNLKEKHEEWKQMLTPEQRGVYNE 812
Query: 78 VLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNVASSGIASLLLPGDRTA 137
+ + V ++ FF+YGFGGTGKTF+W L A +R R IVLNVASSGIASLLL G RTA
Sbjct: 813 ITEAVFNNLGGVFFVYGFGGTGKTFIWKTLSATIRYRDQIVLNVASSGIASLLLEGGRTA 872
Query: 138 HSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNKHCIEALDRSLNDIMKT 197
HSRF IP++ +E S C ++ S A L+KKASL+IWDEAPM+++ C EALD+S +DI+K
Sbjct: 873 HSRFGIPLNPDEFSVCKIKPKSDLANLVKKASLVIWDEAPMMSRFCFEALDKSFSDIIKN 932
Query: 198 QSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSSYLWKHCKVMKLTVNMS 257
+ FGGKVVV G DF Q+ PVI+ R+EIV S++N+SYLW +CKV+KLT N
Sbjct: 933 TD----NTVFGGKVVVFGGDFRQVFPVINGAGRAEIVMSSLNASYLWDNCKVLKLTKNTR 988
Query: 258 L-QNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEETLIEIPPDLLIEQCKEPLLELVNF 316
L N S + A EI+EF DWLL VGDG + ++ +I+IP DLLI +P+ + N
Sbjct: 989 LLANNLSETEAKEIQEFSDWLLAVGDGRINESNDGVAIIDIPEDLLITNADKPIESITNE 1048
Query: 317 AY--PKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGDETEYLSCDTPCKSDED 374
Y PK+ H + FFQ RAILA E + IN ++L + +E YLS D+ +D D
Sbjct: 1049 IYGDPKILHEITDPKFFQGRAILASKNEDVNTINEYLLDQLHAEERIYLSADSIDPTDSD 1108
Query: 375 SGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAAGLCNGTRMIVNALTKY 434
S N T + LN K +PNH+++LK G P++L+RN+D GLCNGTR+ + L
Sbjct: 1109 SLSNPV-ITPDFLNSIKLPGLPNHSLRLKVGAPVLLLRNLDPKGGLCNGTRLQITQLCTQ 1167
Query: 435 IIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLCFVMTINKSQGQSLSHV 494
I+ V+ +++G IP ++LTP+N+ +PFK +RRQF +++ FVMTINKS+GQSL HV
Sbjct: 1168 IVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINKSEGQSLEHV 1227
Query: 495 GLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE 529
GLYLP+PVF+HGQ YVAL RV S+K LK+LI+D +
Sbjct: 1228 GLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKD 1262
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)]
Length = 2052
Score = 457 bits (1175), Expect = e-127
Identities = 231/487 (47%), Positives = 324/487 (66%), Gaps = 5/487 (1%)
Query: 64 VSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNVAS 123
+ L S+Q + ++D V + FFF+YG GGTGKTF+WN + +RS IVL +AS
Sbjct: 929 IPQLNSDQRKVFDTIIDRVSFEKPGFFFVYGHGGTGKTFLWNAIILKIRSEQKIVLAIAS 988
Query: 124 SGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNKHC 183
SG+ASLLLP RTAHSRF IPI I+E S C++R+G+ AEL++K LIIWDEAPM ++ C
Sbjct: 989 SGVASLLLPRGRTAHSRFKIPIDISENSICSIRRGTILAELIQKTLLIIWDEAPMTHRLC 1048
Query: 184 IEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSSYL 243
EALDR+L D++ +PFGGKV+VLG DF QILPVI KGSR+ I ++I +S L
Sbjct: 1049 FEALDRTLRDLLSEHDPANAIVPFGGKVIVLGGDFRQILPVIQKGSRASIDDASITNSPL 1108
Query: 244 WKHCKVMKLTVNMSL-QNATSTSSATEIKEFVDWLLQVGDGTVKTIDEEE----TLIEIP 298
W+H K++ L +NM L ++ + + E+ F W+L +G+G V E T +EIP
Sbjct: 1109 WRHVKLLSLKINMRLLRSGLTQTKKDELDNFAKWVLHIGNGDVPATQRERETEPTWVEIP 1168
Query: 299 PDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGD 358
DLLI+ + + L++ +P L HN ++ RAI+ P ++++INN+++ ++PG+
Sbjct: 1169 QDLLIKTDGDKIPALIDEVFPDLLHNHTDPTYLSCRAIVCPNNGTVDDINNYVVGLLPGE 1228
Query: 359 ETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAA 418
E EYLSCDT KS E D + +E N + PNH + LK GV IML+RN++Q+
Sbjct: 1229 EKEYLSCDTIAKSSEHIPDLDLLYPTEFPNSINVNNFPNHRLVLKKGVIIMLLRNLNQSM 1288
Query: 419 GLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLC 478
GLCNGTR+++N L ++++ T+L +K+GE F+PR+SL +NS PF QRRQF V +C
Sbjct: 1289 GLCNGTRLLINVLGEWVLQRTILTGSKIGEIVFVPRISLNTTNSKWPFTLQRRQFPVRVC 1348
Query: 479 FVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTTRN 538
+ MTINKSQGQ+LSHVG+YL +PVFTHGQ YV + R SR LK+LI DD ++ T N
Sbjct: 1349 YAMTINKSQGQTLSHVGVYLKKPVFTHGQLYVVISRATSRSGLKILIEDDNESCASETSN 1408
Query: 539 VVYQEVL 545
VVY E+L
Sbjct: 1409 VVYHEIL 1415
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 455 bits (1171), Expect = e-126
Identities = 234/538 (43%), Positives = 347/538 (64%), Gaps = 4/538 (0%)
Query: 9 MIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIHDEFVSSLT 68
+IEIEK ++ +SLKE+ + P +++ E + +E+NY++ + H + +++L
Sbjct: 1036 LIEIEKNMRQAGKSLKEYTGIEPPNVAKLSEIENSLINEEMNYDKERLKHQHLQILNTLN 1095
Query: 69 SEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNVASSGIAS 128
EQ+ + +++ F+ G+GGTGKT++W + LRS G IV+ VASSGIA+
Sbjct: 1096 IEQKKAFDAIIESAHQSLGKLIFVDGYGGTGKTYLWKAITTRLRSEGKIVIAVASSGIAA 1155
Query: 129 LLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNKHCIEALD 188
LLL G RTAHS F+IPI++ + STC ++QGS A+LL K SLI+WDEAPM N++C EALD
Sbjct: 1156 LLLQGGRTAHSAFNIPINLTDESTCFIKQGSRIADLLMKTSLILWDEAPMANRNCFEALD 1215
Query: 189 RSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSSYLWKHCK 248
+SL D+ + ++ + Y PFGG VVLG DF QILP++ KG R V ++I SYLW+H +
Sbjct: 1216 KSLRDVQRFRNENSYQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNASIKFSYLWQHFE 1275
Query: 249 VMKLTVNMSLQNATSTSSATEIK--EFVDWLLQVGDGTVKTIDEEETLIEIPPDLLIEQC 306
V LT NM L N+ S A K EF +W+L++G+G +D E+ + +P DLL+++
Sbjct: 1276 VFNLTKNMRL-NSVSKDQAEHQKTAEFAEWILRIGNGDTILLD-EKGWVSMPSDLLLQKG 1333
Query: 307 KEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIPGDETEYLSCD 366
+P ++V+ YP L +N K + +ERAIL PT + + E+N +++ I GD+ YLS D
Sbjct: 1334 DDPKAQIVDSTYPGLQYNCCKPKYLEERAILCPTNDDVNELNEYIMDQIQGDKVTYLSHD 1393
Query: 367 TPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQAAGLCNGTRM 426
+ KS S + + +E LN K IPNH +KLK G+P+ML+RNI+Q AGLCNGTRM
Sbjct: 1394 SVSKSMSYSHEMEMLYPTEFLNSLKHPGIPNHQLKLKVGLPVMLLRNINQNAGLCNGTRM 1453
Query: 427 IVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVTLCFVMTINKS 486
+ K +I ++ +G+ IP++ ++P+ PF R+QF +++CF MTINKS
Sbjct: 1454 RITRFGKRVIEAEIITGTHIGDMVCIPQIIMSPNERKWPFVLNRKQFPLSVCFAMTINKS 1513
Query: 487 QGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTTRNVVYQEV 544
QGQ+L+ VGLYLPR VFTHGQ YVA+ RV SR LK++I D E +N+VY+E+
Sbjct: 1514 QGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRDGLKIMIADKECPGEGMVKNIVYKEI 1571
>ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|55296801|dbj|BAD68127.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1427
Score = 446 bits (1146), Expect = e-123
Identities = 240/555 (43%), Positives = 352/555 (63%), Gaps = 9/555 (1%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
D EL+++ + +IE +L + S+ +F LP + + DELNYN ++ +
Sbjct: 871 DIELKDILIEQIEYLLSKSGISIDKFN-LPQMTVRYKLDSTNTLIQDELNYNANDLEEQA 929
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
++ L +Q+ + +++ V++ S FFF+ G GGTGKTF+WN + + LR++ IVL
Sbjct: 930 NKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGKTFLWNTIVSFLRAKKEIVLT 989
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSG+ASLLLP R AHSRF IP+ I+E+S C++++G+ AELL + SLIIWDEA M N
Sbjct: 990 VASSGVASLLLPNGRIAHSRFRIPVDIDELSLCDIKRGTKLAELLIETSLIIWDEALMTN 1049
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDR+L DI+ + + D PFGGKVVVLG D QILPVI S+ EI+ ++I
Sbjct: 1050 RQCFEALDRTLRDILSEKYINAIDKPFGGKVVVLGGDPKQILPVIENASKLEIINASIVK 1109
Query: 241 SYLWKHCKVMKLTVNMSLQNATS-TSSATEIKEFVDWLLQVGDGTVKTI-------DEEE 292
SYLW + K + L NM LQ S T EI +F +W+L +G+G + T D +
Sbjct: 1110 SYLWGYVKKIFLFENMRLQKTKSNTLEYKEINDFNNWILDIGNGKINTKQSTAQNEDTDT 1169
Query: 293 TLIEIPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFML 352
T+I +P +LLI + L ELV F YP ++ ++ + RAILA T E ++E+NN++L
Sbjct: 1170 TIILVPENLLINTGENKLEELVKFTYPDFKNSFFNPNYLKNRAILATTNEIVDEVNNYIL 1229
Query: 353 AMIPGDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIR 412
+++P E EY S DT + + + D + E LN + P H +KLK GVPI+L+R
Sbjct: 1230 SLVPNQEKEYYSADTLSQCMDTTNDADILYPVEYLNSLNANNFPTHVLKLKVGVPIILLR 1289
Query: 413 NIDQAAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQ 472
N++Q GLCNGTR+I+ L II ++ +GE +IPR++LT + PF RR
Sbjct: 1290 NLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGEKAYIPRINLTTRGNQWPFTLCRRH 1349
Query: 473 FSVTLCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VV 532
F + +C+ MTINKSQGQ+LS+VGLYL +PVFTHGQ YVA+ RV + K LK+LI +++
Sbjct: 1350 FPIKVCYSMTINKSQGQTLSNVGLYLKKPVFTHGQLYVAISRVSNSKGLKILIENEDGTC 1409
Query: 533 SNTTRNVVYQEVLDN 547
+ T+N+VY+E+LD+
Sbjct: 1410 ATQTKNIVYREILDS 1424
>ref|NP_916487.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1602
Score = 446 bits (1146), Expect = e-123
Identities = 240/555 (43%), Positives = 352/555 (63%), Gaps = 9/555 (1%)
Query: 1 DEELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH 60
D EL+++ + +IE +L + S+ +F LP + + DELNYN ++ +
Sbjct: 1046 DIELKDILIEQIEYLLSKSGISIDKFN-LPQMTVRYKLDSTNTLIQDELNYNANDLEEQA 1104
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
++ L +Q+ + +++ V++ S FFF+ G GGTGKTF+WN + + LR++ IVL
Sbjct: 1105 NKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGKTFLWNTIVSFLRAKKEIVLT 1164
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSG+ASLLLP R AHSRF IP+ I+E+S C++++G+ AELL + SLIIWDEA M N
Sbjct: 1165 VASSGVASLLLPNGRIAHSRFRIPVDIDELSLCDIKRGTKLAELLIETSLIIWDEALMTN 1224
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDR+L DI+ + + D PFGGKVVVLG D QILPVI S+ EI+ ++I
Sbjct: 1225 RQCFEALDRTLRDILSEKYINAIDKPFGGKVVVLGGDPKQILPVIENASKLEIINASIVK 1284
Query: 241 SYLWKHCKVMKLTVNMSLQNATS-TSSATEIKEFVDWLLQVGDGTVKTI-------DEEE 292
SYLW + K + L NM LQ S T EI +F +W+L +G+G + T D +
Sbjct: 1285 SYLWGYVKKIFLFENMRLQKTKSNTLEYKEINDFNNWILDIGNGKINTKQSTAQNEDTDT 1344
Query: 293 TLIEIPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFML 352
T+I +P +LLI + L ELV F YP ++ ++ + RAILA T E ++E+NN++L
Sbjct: 1345 TIILVPENLLINTGENKLEELVKFTYPDFKNSFFNPNYLKNRAILATTNEIVDEVNNYIL 1404
Query: 353 AMIPGDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIR 412
+++P E EY S DT + + + D + E LN + P H +KLK GVPI+L+R
Sbjct: 1405 SLVPNQEKEYYSADTLSQCMDTTNDADILYPVEYLNSLNANNFPTHVLKLKVGVPIILLR 1464
Query: 413 NIDQAAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQ 472
N++Q GLCNGTR+I+ L II ++ +GE +IPR++LT + PF RR
Sbjct: 1465 NLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGEKAYIPRINLTTRGNQWPFTLCRRH 1524
Query: 473 FSVTLCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VV 532
F + +C+ MTINKSQGQ+LS+VGLYL +PVFTHGQ YVA+ RV + K LK+LI +++
Sbjct: 1525 FPIKVCYSMTINKSQGQTLSNVGLYLKKPVFTHGQLYVAISRVSNSKGLKILIENEDGTC 1584
Query: 533 SNTTRNVVYQEVLDN 547
+ T+N+VY+E+LD+
Sbjct: 1585 ATQTKNIVYREILDS 1599
>gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa (japonica cultivar-group)]
Length = 1806
Score = 444 bits (1141), Expect = e-123
Identities = 240/550 (43%), Positives = 343/550 (61%), Gaps = 6/550 (1%)
Query: 2 EELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIHD 61
E L L + E+ + + ++K++ LP P FS F + +EL + M D
Sbjct: 748 EHLLTLLLHELSNVFGKSGGNIKDYN-LPQPTFSPQVAFGNRLIEEELATDPLMMSMHAD 806
Query: 62 EFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLNV 121
++ L + Q+ + ++ V+++ FFF+ G GGT KTF+WN + A +RS IVL V
Sbjct: 807 SLIAQLNANQKTIFDKIVGSVVANQPGFFFVCGHGGTRKTFMWNAIIAKIRSSNKIVLAV 866
Query: 122 ASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLNK 181
ASSG+ASLLLP RTAHSRF IPI INE S CN+++G+ AELL+ SLIIWDEAPM ++
Sbjct: 867 ASSGVASLLLPKGRTAHSRFKIPIDINETSLCNVKRGTMVAELLENTSLIIWDEAPMTHR 926
Query: 182 HCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINSS 241
C EALDR+L DI+ + IPFGGK VVLG DF QILPV+ KGSRS IV + I +S
Sbjct: 927 RCFEALDRTLRDILSEITPSNVIIPFGGKTVVLGGDFRQILPVVPKGSRSAIVDALITNS 986
Query: 242 YLWKHCKVMKLTVNMSLQNATSTSS-ATEIKEFVDWLLQVGDGTVKTI----DEEETLIE 296
LWKH +++L VNM L N + S+ E+ +F W+L VGDGT+ + + + I
Sbjct: 987 KLWKHVVMLRLNVNMRLLNPSLPSTQREELSDFSKWVLAVGDGTLPATKRDGESQPSWIT 1046
Query: 297 IPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMIP 356
IP DLL+ + ++ +V+ Y + + RAI+ P+ ++EINN+++++IP
Sbjct: 1047 IPDDLLVMTDGDKIVAVVSEVYHDFLACYKNPEYLASRAIVCPSNSVVDEINNYVVSLIP 1106
Query: 357 GDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNIDQ 416
GDE EYLS DT K E D + +E+LN + P H + LK GV +ML++N++Q
Sbjct: 1107 GDEKEYLSYDTISKCSEQIPDFDLLYPTELLNSIDANNFPTHRLVLKEGVTVMLLQNLNQ 1166
Query: 417 AAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSVT 476
+ GLCNGT ++V L + I+ +L + +GET IP++SL+ + PF QRRQF +
Sbjct: 1167 SMGLCNGTSLLVVGLGQRILNCVILTGSNIGETVCIPKISLSTTKLKWPFTLQRRQFPIR 1226
Query: 477 LCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNTT 536
+C+ MTINKSQGQ+L VG+YL +PVFTHGQ YVA R SR L++LI +D+ + T
Sbjct: 1227 VCYSMTINKSQGQTLQRVGVYLKKPVFTHGQLYVAFSRATSRSGLRILIENDDGSCGSET 1286
Query: 537 RNVVYQEVLD 546
+NVVY E+LD
Sbjct: 1287 KNVVYHEILD 1296
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 438 bits (1126), Expect = e-121
Identities = 240/550 (43%), Positives = 337/550 (60%), Gaps = 8/550 (1%)
Query: 2 EELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH- 60
+ L N+ + E+ + + ++K+F LP+P S H + DE M+ +H
Sbjct: 1018 DHLLNMLLHELIAVFANSGGNIKDFN-LPHPS-SVPHVLGTNRLIDEEITIDPLMLAMHA 1075
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
D FV L ++Q + + +++ FFF+ G GGTGKTF+WN + A LRS+ IVL
Sbjct: 1076 DSFVQQLNNDQITVFNTICSRAIANEPGFFFVSGHGGTGKTFLWNTIIAKLRSQNKIVLA 1135
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSG+ASLLLP RTAHSRF IPI I+E S CN+++G+ AELL + +LIIWDEAPM +
Sbjct: 1136 VASSGVASLLLPRGRTAHSRFKIPIDIDETSICNIKRGTMLAELLAETALIIWDEAPMTH 1195
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDR+L DI+ IPFGGK +VLG DF QILPVI KGSR I+ ++I +
Sbjct: 1196 RRCFEALDRTLRDILSETCPSNSIIPFGGKPIVLGGDFKQILPVIPKGSRQAIINASITN 1255
Query: 241 SYLWKHCKVMKLTVNMSLQNAT-STSSATEIKEFVDWLLQVGDGTVKTIDEE----ETLI 295
S LWKH ++ L +NM L N + E+ +F W+L +G+GT+ +E I
Sbjct: 1256 SELWKHVALLSLNINMRLLNPMLPDNQKKELHDFSQWVLAIGNGTLPMTAKEGENYPAWI 1315
Query: 296 EIPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMI 355
IP DLL+ + + +V+ Y + + RAI+ PT +++EIN++++ ++
Sbjct: 1316 TIPDDLLVMTSGDKIAAIVHEVYSDFLTCYRDIEYLASRAIVCPTNTTVDEINDYIIGLV 1375
Query: 356 PGDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNID 415
PGD YLSCDT KS E D + E LN + P H + LK GV +ML+RN++
Sbjct: 1376 PGDSRVYLSCDTISKSSEQIPDFDLLYPPEFLNSINATNFPTHKLVLKEGVVVMLLRNLN 1435
Query: 416 QAAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSV 475
Q+ GLCNGTR++V L I+ VL + +GET +IPR++L + PF QRRQF V
Sbjct: 1436 QSIGLCNGTRLLVTVLGDRILQCIVLTGSNIGETVYIPRITLGTTKMKWPFTLQRRQFPV 1495
Query: 476 TLCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNT 535
+C+ MTINKSQGQ+L VG+YL +PVFTHGQ YVA+ RV SR LK+LI +D+
Sbjct: 1496 RVCYSMTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQ 1555
Query: 536 TRNVVYQEVL 545
T+N+VY EVL
Sbjct: 1556 TKNIVYSEVL 1565
>ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50509840|dbj|BAD32013.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 437 bits (1124), Expect = e-121
Identities = 238/550 (43%), Positives = 337/550 (61%), Gaps = 8/550 (1%)
Query: 2 EELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH- 60
+ L N+ + E+ + + ++K+F LP+P S H + DE M+ +H
Sbjct: 927 DHLLNMLLHELIAVFANSGGNIKDFN-LPHPS-SVPHVLGTNRLIDEEITIDPLMLAMHA 984
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
D FV L ++Q + + +++ FFF+ G GGTGKTF+WN + A LRS+ IVL
Sbjct: 985 DSFVQQLNNDQITVFSTICSRAIANEPGFFFVSGHGGTGKTFLWNTIIAKLRSQNKIVLA 1044
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSG+ASLLLP RTAHSRF IPI I+E S CN+++G+ AELL + +LIIWDEAPM +
Sbjct: 1045 VASSGVASLLLPRGRTAHSRFKIPIDIDETSICNIKRGTMLAELLAETALIIWDEAPMTH 1104
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDR+L DI+ +PFGGK +VLG DF QILPVI KGSR I+ ++I +
Sbjct: 1105 RRCFEALDRTLRDILSETCPSNSIVPFGGKPIVLGGDFKQILPVIPKGSRQAIINASITN 1164
Query: 241 SYLWKHCKVMKLTVNMSLQNAT-STSSATEIKEFVDWLLQVGDGTVKTIDEE----ETLI 295
S LWKH ++ L +NM L N + E+ +F W+L +G+GT+ +E I
Sbjct: 1165 SELWKHVALLSLNINMRLLNPMLPDNQKKELHDFSQWVLAIGNGTLPMTAKEGENYPAWI 1224
Query: 296 EIPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMI 355
IP DLL+ + + +V+ Y + + RAI+ PT +++EIN++++ ++
Sbjct: 1225 TIPDDLLVMTSGDKIAAIVHEVYSDFLTCYRDIEYLASRAIVCPTNTTVDEINDYIIGLV 1284
Query: 356 PGDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNID 415
PGD YLSCDT KS E D + E LN + P H + LK GV +ML+RN++
Sbjct: 1285 PGDSRVYLSCDTISKSSEQIPDFDLLYPPEFLNSINATNFPTHKLVLKEGVVVMLLRNLN 1344
Query: 416 QAAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSV 475
Q+ GLCNGTR++V L I+ +L + +GET +IPR++L + PF QRRQF V
Sbjct: 1345 QSIGLCNGTRLLVTVLGDRILQCIILTGSNIGETVYIPRITLGTTKMKWPFTLQRRQFPV 1404
Query: 476 TLCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNT 535
+C+ MTINKSQGQ+L VG+YL +PVFTHGQ YVA+ RV SR LK+LI +D+
Sbjct: 1405 RVCYSMTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQ 1464
Query: 536 TRNVVYQEVL 545
T+N+VY EVL
Sbjct: 1465 TKNIVYSEVL 1474
>ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|38424032|dbj|BAD01692.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|38637630|dbj|BAD03910.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1430
Score = 436 bits (1122), Expect = e-121
Identities = 239/550 (43%), Positives = 336/550 (60%), Gaps = 8/550 (1%)
Query: 2 EELQNLCMIEIEKILQGNERSLKEFPCLPYPKFSEIHNFEVIFVADELNYNRAEMVKIH- 60
+ L N+ + E+ + + ++K+F LP+P S H + DE M+ +H
Sbjct: 841 DHLLNMLLHELIAVFANSGGNIKDFN-LPHPS-SVPHVLGTNRLIDEEITIDPLMLAMHA 898
Query: 61 DEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVWNILYAALRSRGLIVLN 120
D FV L ++Q + + +++ FFF+ G GGTGKTF+WN + A LRS+ IVL
Sbjct: 899 DSFVQQLNNDQITVFNTICSRAIANEPGFFFVSGHGGTGKTFLWNTIIAKLRSQNKIVLA 958
Query: 121 VASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAELLKKASLIIWDEAPMLN 180
VASSG+ASLLLP RT HSRF IPI I+E S CN+++G+ AELL + +LIIWDEAPM +
Sbjct: 959 VASSGVASLLLPRGRTTHSRFKIPIDIDETSICNIKRGTMLAELLAETALIIWDEAPMTH 1018
Query: 181 KHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPVISKGSRSEIVGSAINS 240
+ C EALDR+L DI+ IPFGGK +VLG DF QILPVI KGSR I+ ++I +
Sbjct: 1019 RRCFEALDRTLRDILSETCPSNSIIPFGGKPIVLGGDFKQILPVIPKGSRQAIINASITN 1078
Query: 241 SYLWKHCKVMKLTVNMSLQNAT-STSSATEIKEFVDWLLQVGDGTVKTIDEE----ETLI 295
S LWKH ++ L +NM L N + E+ +F W+L +G+GT+ +E I
Sbjct: 1079 SELWKHVALLSLNINMRLLNPMLPDNQKKELHDFSQWVLAIGNGTLPMTAKEGENYPAWI 1138
Query: 296 EIPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLESLEEINNFMLAMI 355
IP DLL+ + + +V+ Y + + RAI+ PT +++EIN++++ ++
Sbjct: 1139 TIPDDLLVMTSGDKIAAIVHEVYSDFLTCYRDIEYLASRAIVCPTNTTVDEINDYIIGLV 1198
Query: 356 PGDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLKAGVPIMLIRNID 415
PGD YLSCDT KS E D + E LN + P H + LK GV +ML+RN++
Sbjct: 1199 PGDSRVYLSCDTISKSSEQIPDFDLLYPPEFLNSINATNFPTHKLVLKEGVVVMLLRNLN 1258
Query: 416 QAAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSDIPFKFQRRQFSV 475
Q+ GLCNGTR++V L I+ VL + +GET +IPR++L + PF QRRQF V
Sbjct: 1259 QSIGLCNGTRLLVTVLGDRILQCIVLTGSNIGETVYIPRITLGTTKMKWPFTLQRRQFPV 1318
Query: 476 TLCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKMLIIDDE*VVSNT 535
+C+ MTINKSQGQ+L VG+YL +PVFTHGQ YVA+ RV SR LK+LI +D+
Sbjct: 1319 RVCYSMTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQ 1378
Query: 536 TRNVVYQEVL 545
T+N+VY EVL
Sbjct: 1379 TKNIVYSEVL 1388
>ref|NP_912739.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1278
Score = 436 bits (1121), Expect = e-121
Identities = 231/502 (46%), Positives = 321/502 (63%), Gaps = 3/502 (0%)
Query: 45 VADELNYNRAEMVKIHDEFVSSLTSEQEIFYKNVLDDVLSDNS*FFFLYGFGGTGKTFVW 104
V++EL + + D + L S+Q+ + ++ V FFF+YG GGTGKTF+
Sbjct: 741 VSEELALDSVALAAHADSIIPKLNSDQKRVFDTIMCRVNESKPGFFFVYGHGGTGKTFLC 800
Query: 105 NILYAALRSRGLIVLNVASSGIASLLLPGDRTAHSRFSIPISINEISTCNLRQGSPKAEL 164
N L + +RS IVL VASSG+ASLLLP RTAHSRF IPI INE S C +++G+ AEL
Sbjct: 801 NALISKVRSEKKIVLAVASSGVASLLLPRGRTAHSRFKIPIDINENSLCTIKRGTMLAEL 860
Query: 165 LKKASLIIWDEAPMLNKHCIEALDRSLNDIMKTQSTHGYDIPFGGKVVVLGDDFGQILPV 224
++K SLIIWDEAPM ++ C EALDR+L D++ + +PFGGKVVVLG DF QILPV
Sbjct: 861 IQKTSLIIWDEAPMTHRRCFEALDRTLRDLLSEHAPSNGLVPFGGKVVVLGGDFRQILPV 920
Query: 225 ISKGSRSEIVGSAINSSYLWKHCKVMKLTVNMSL-QNATSTSSATEIKEFVDWLLQVGDG 283
+ KGSR+ I+ ++I +S LW H ++KLTVNM L Q E+++F W+L +GDG
Sbjct: 921 VRKGSRASIIDASITNSPLWSHAVLLKLTVNMRLLQCNLGEQQQQELEKFAQWVLALGDG 980
Query: 284 TVKTIDEEETLIEIPPDLLIEQCKEPLLELVNFAYPKLAHNLQKSSFFQERAILAPTLES 343
K + E T I+IP DLLI+ + + +VN +P A S+ AI+ P +
Sbjct: 981 --KNDESEATWIDIPDDLLIKTTGDKIHSIVNEVFPGFASKYTDPSYLASCAIVCPNNST 1038
Query: 344 LEEINNFMLAMIPGDETEYLSCDTPCKSDEDSGDNAE*FTSEVLNDFKCSEIPNHAIKLK 403
+++IN+ M+ M+PG+ EYLSCDT KS E D + +E LN + P H + LK
Sbjct: 1039 VDDINDRMVDMVPGEVKEYLSCDTISKSSEHIPDFDLLYPTEFLNSISANNFPAHKLALK 1098
Query: 404 AGVPIMLIRNIDQAAGLCNGTRMIVNALTKYIIVVTVLNENKMGETTFIPRMSLTPSNSD 463
GV +ML+RN++Q+ GLCNGTR++ +L + ++ +L +G+ FIPR++LT ++
Sbjct: 1099 KGVTVMLLRNLNQSMGLCNGTRLLALSLGQRLLECQILTGTNIGDRVFIPRIALTTTSPK 1158
Query: 464 IPFKFQRRQFSVTLCFVMTINKSQGQSLSHVGLYLPRPVFTHGQPYVALYRVKSRKMLKM 523
PF QRRQF V +C+ MTINKSQGQ+L VG+YL + VFTHGQ YVA+ R SR L++
Sbjct: 1159 WPFTLQRRQFPVRVCYAMTINKSQGQTLKRVGVYLKKAVFTHGQLYVAVSRSTSRDGLRI 1218
Query: 524 LIIDDE*VVSNTTRNVVYQEVL 545
L D+ S+ TRNVVY EVL
Sbjct: 1219 LTEGDDEACSSKTRNVVYHEVL 1240
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.139 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 874,547,672
Number of Sequences: 2540612
Number of extensions: 35737834
Number of successful extensions: 78426
Number of sequences better than 10.0: 259
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 77704
Number of HSP's gapped (non-prelim): 448
length of query: 547
length of database: 863,360,394
effective HSP length: 133
effective length of query: 414
effective length of database: 525,458,998
effective search space: 217540025172
effective search space used: 217540025172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0031.3