BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0030.13
(117 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_974378.1| exostosin family protein [Arabidopsis thaliana] 155 2e-37
ref|NP_189804.3| exostosin family protein [Arabidopsis thaliana] 155 2e-37
emb|CAB68119.1| putative protein [Arabidopsis thaliana] gi|11358... 153 8e-37
gb|AAL62020.1| AT5g33290/F19N2_10 [Arabidopsis thaliana] gi|1514... 147 8e-35
ref|NP_198314.2| exostosin family protein [Arabidopsis thaliana] 147 8e-35
ref|NP_197526.1| exostosin family protein [Arabidopsis thaliana] 145 2e-34
emb|CAB96648.1| putative protein [Arabidopsis thaliana] gi|15238... 143 1e-33
ref|XP_466699.1| exostosin-like protein [Oryza sativa (japonica ... 130 1e-29
dbj|BAB08605.1| unnamed protein product [Arabidopsis thaliana] 127 6e-29
ref|NP_196000.1| exostosin family protein / pentatricopeptide (P... 127 6e-29
ref|NP_197913.1| exostosin family protein [Arabidopsis thaliana] 121 5e-27
ref|XP_476940.1| limonene cyclase like protein [Oryza sativa (ja... 119 1e-26
ref|XP_476938.1| putative pectin-glucuronyltransferase [Oryza sa... 119 1e-26
gb|AAU04753.1| EXO [Cucumis melo] 119 2e-26
ref|XP_471004.1| OSJNBa0027H06.12 [Oryza sativa (japonica cultiv... 117 5e-26
ref|NP_910586.1| Similar to Arabidopsis thaliana DNA chromosome ... 113 1e-24
dbj|BAD44823.1| putative pectin-glucuronyltransferase [Oryza sat... 113 1e-24
gb|AAF13080.1| hypothetical protein [Arabidopsis thaliana] gi|15... 108 3e-23
ref|NP_197954.1| exostosin family protein [Arabidopsis thaliana] 99 2e-20
gb|AAM64263.1| unknown [Arabidopsis thaliana] 99 2e-20
>ref|NP_974378.1| exostosin family protein [Arabidopsis thaliana]
Length = 341
Score = 155 bits (392), Expect = 2e-37
Identities = 69/120 (57%), Positives = 89/120 (73%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP---FKARHPDEANLFL 57
M+K KVW Y+EGEQPLVHDGP+ +Y IEGQF+DE+ P F+A P+EA+ F
Sbjct: 1 MMKTFKVWSYKEGEQPLVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFF 60
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
+PFS++NIV YVY PI S D++ RL R+ DYV VVA K+P+WN+SNGADHF++SCHD
Sbjct: 61 LPFSVANIVHYVYQPITSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHD 120
>ref|NP_189804.3| exostosin family protein [Arabidopsis thaliana]
Length = 425
Score = 155 bits (392), Expect = 2e-37
Identities = 69/120 (57%), Positives = 89/120 (73%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP---FKARHPDEANLFL 57
M+K KVW Y+EGEQPLVHDGP+ +Y IEGQF+DE+ P F+A P+EA+ F
Sbjct: 85 MMKTFKVWSYKEGEQPLVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFF 144
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
+PFS++NIV YVY PI S D++ RL R+ DYV VVA K+P+WN+SNGADHF++SCHD
Sbjct: 145 LPFSVANIVHYVYQPITSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHD 204
>emb|CAB68119.1| putative protein [Arabidopsis thaliana] gi|11358246|pir||T46112
hypothetical protein T27B3.50 - Arabidopsis thaliana
Length = 340
Score = 153 bits (387), Expect = 8e-37
Identities = 68/119 (57%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Query: 2 VKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP---FKARHPDEANLFLI 58
+K KVW Y+EGEQPLVHDGP+ +Y IEGQF+DE+ P F+A P+EA+ F +
Sbjct: 1 MKTFKVWSYKEGEQPLVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFFL 60
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
PFS++NIV YVY PI S D++ RL R+ DYV VVA K+P+WN+SNGADHF++SCHD
Sbjct: 61 PFSVANIVHYVYQPITSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHD 119
>gb|AAL62020.1| AT5g33290/F19N2_10 [Arabidopsis thaliana]
gi|15146187|gb|AAK83577.1| AT5g33290/F19N2_10
[Arabidopsis thaliana]
Length = 341
Score = 147 bits (370), Expect = 8e-35
Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDE--IDSCR-KSPFKARHPDEANLFL 57
M+ R KVW Y EGE PL HDGP+ +Y IEGQFMDE +D + +S F+A P+ A++F
Sbjct: 1 MMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSRSRFRADRPENAHVFF 60
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
IPFS++ ++ +VY PI S + + RL RL+EDYV VVA K+PYWNRS G DHF++SCHD
Sbjct: 61 IPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPYWNRSQGGDHFMVSCHD 120
>ref|NP_198314.2| exostosin family protein [Arabidopsis thaliana]
Length = 500
Score = 147 bits (370), Expect = 8e-35
Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDE--IDSCR-KSPFKARHPDEANLFL 57
M+ R KVW Y EGE PL HDGP+ +Y IEGQFMDE +D + +S F+A P+ A++F
Sbjct: 160 MMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSRSRFRADRPENAHVFF 219
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
IPFS++ ++ +VY PI S + + RL RL+EDYV VVA K+PYWNRS G DHF++SCHD
Sbjct: 220 IPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPYWNRSQGGDHFMVSCHD 279
>ref|NP_197526.1| exostosin family protein [Arabidopsis thaliana]
Length = 334
Score = 145 bits (367), Expect = 2e-34
Identities = 69/117 (58%), Positives = 88/117 (74%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+ KVWVY EGE PLVH GP+ +YSIEGQFMDEI++ SPF A +P+EA+ FL+P
Sbjct: 1 MEKKFKVWVYREGETPLVHMGPMNNIYSIEGQFMDEIET-GMSPFAANNPEEAHAFLLPV 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S++NIV Y+Y P+++ Y +L ++ DYV VVA KYPYWNRS GADHF +SCHD
Sbjct: 60 SVANIVHYLYRPLVT---YSREQLHKVFLDYVDVVAHKYPYWNRSLGADHFYVSCHD 113
>emb|CAB96648.1| putative protein [Arabidopsis thaliana]
gi|15238967|ref|NP_196674.1| exostosin family protein
[Arabidopsis thaliana]
Length = 336
Score = 143 bits (360), Expect = 1e-33
Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M KR K+W Y EGE PL H GPL +Y+IEGQFMDEI++ S FKA P+EA +F IP
Sbjct: 1 MEKRFKIWTYREGEAPLFHKGPLNNIYAIEGQFMDEIEN-GNSRFKAASPEEATVFYIPV 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
I NI+++VY P S Y RLQ +V+DY+ +++++YPYWNRS GADHF LSCHD
Sbjct: 60 GIVNIIRFVYRPYTS---YARDRLQNIVKDYISLISNRYPYWNRSRGADHFFLSCHD 113
>ref|XP_466699.1| exostosin-like protein [Oryza sativa (japonica cultivar-group)]
gi|47497631|dbj|BAD19700.1| exostosin-like protein
[Oryza sativa (japonica cultivar-group)]
Length = 345
Score = 130 bits (326), Expect = 1e-29
Identities = 64/117 (54%), Positives = 80/117 (67%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M +R K+W Y EGE P+ H GP +YSIEGQFM E+D R S F AR PD+A+ FL+P
Sbjct: 1 MERRFKIWTYREGEPPVAHIGPGTDIYSIEGQFMYEMDDPR-SRFAARRPDDAHAFLLPI 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ N+V YVY + L L+ LV DYV VVA++YPYWNRS GADH ++SCHD
Sbjct: 60 SVCNLVHYVYRLNATGD---LAPLRGLVADYVRVVAERYPYWNRSRGADHVIVSCHD 113
>dbj|BAB08605.1| unnamed protein product [Arabidopsis thaliana]
Length = 408
Score = 127 bits (319), Expect = 6e-29
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+ K++VY+EGE PL HDGP K +YS+EG F+ EI++ + F+ +PD+A++F +PF
Sbjct: 76 MEKQFKIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTR--FRTNNPDKAHVFYLPF 133
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+YVY + ++ V+DY+++V DKYPYWNRS GADHF+LSCHD
Sbjct: 134 SVVKMVRYVY----ERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCHD 186
>ref|NP_196000.1| exostosin family protein / pentatricopeptide (PPR) repeat-containing
protein [Arabidopsis thaliana]
Length = 1388
Score = 127 bits (319), Expect = 6e-29
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+ K++VY+EGE PL HDGP K +YS+EG F+ EI++ + F+ +PD+A++F +PF
Sbjct: 1056 MEKQFKIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTR--FRTNNPDKAHVFYLPF 1113
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+YVY + ++ V+DY+++V DKYPYWNRS GADHF+LSCHD
Sbjct: 1114 SVVKMVRYVY----ERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCHD 1166
>ref|NP_197913.1| exostosin family protein [Arabidopsis thaliana]
Length = 334
Score = 121 bits (303), Expect = 5e-27
Identities = 53/117 (45%), Positives = 85/117 (72%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M KR KV+VYEEGE PLVHDGP K +Y++EG+F+ E++ R++ F+ P++A ++ +PF
Sbjct: 1 MEKRFKVYVYEEGEPPLVHDGPCKSVYAVEGRFITEMEK-RRTKFRTYDPNQAYVYFLPF 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S++ +V+Y+Y + + L+ V DY+ +V+ +P+WNR+NGADHF+L+CHD
Sbjct: 60 SVTWLVRYLY-----EGNSDAKPLKTFVSDYIRLVSTNHPFWNRTNGADHFMLTCHD 111
>ref|XP_476940.1| limonene cyclase like protein [Oryza sativa (japonica
cultivar-group)] gi|34394613|dbj|BAC83915.1| limonene
cyclase like protein [Oryza sativa (japonica
cultivar-group)] gi|50508945|dbj|BAD31849.1| limonene
cyclase like protein [Oryza sativa (japonica
cultivar-group)]
Length = 417
Score = 119 bits (299), Expect = 1e-26
Identities = 54/117 (46%), Positives = 82/117 (69%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K KV+VYEEGE P+ HDGP + +YS EG+F+ ++ ++ + R PD+A++F +PF
Sbjct: 268 MEKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEM--ENRMRTRDPDQAHVFFLPF 325
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+ +Y P + + L+R + DY++VV+ KYP+WNRS GADHF+LSCHD
Sbjct: 326 SVVKMVKMIYEP----NSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHD 378
>ref|XP_476938.1| putative pectin-glucuronyltransferase [Oryza sativa (japonica
cultivar-group)] gi|34394611|dbj|BAC83913.1| putative
pectin-glucuronyltransferase [Oryza sativa (japonica
cultivar-group)] gi|50508944|dbj|BAD31848.1| putative
pectin-glucuronyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 606
Score = 119 bits (299), Expect = 1e-26
Identities = 54/117 (46%), Positives = 82/117 (69%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K KV+VYEEGE P+ HDGP + +YS EG+F+ ++ ++ + R PD+A++F +PF
Sbjct: 268 MEKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEM--ENRMRTRDPDQAHVFFLPF 325
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+ +Y P + + L+R + DY++VV+ KYP+WNRS GADHF+LSCHD
Sbjct: 326 SVVKMVKMIYEP----NSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHD 378
>gb|AAU04753.1| EXO [Cucumis melo]
Length = 343
Score = 119 bits (298), Expect = 2e-26
Identities = 51/117 (43%), Positives = 83/117 (70%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M + LK++VY+EGE P+ H GP K +YS EG+F+ E++ + + + PD+A L+ +PF
Sbjct: 12 MERLLKIYVYKEGEPPMFHGGPCKSIYSTEGRFIHEME--KGNLYTTNDPDQALLYFLPF 69
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ N+VQY+Y+P + + + R + DY++V++ K+P+W+RS GADHF+LSCHD
Sbjct: 70 SVVNLVQYLYVP----NSHEVNAIGRAITDYINVISKKHPFWDRSLGADHFMLSCHD 122
>ref|XP_471004.1| OSJNBa0027H06.12 [Oryza sativa (japonica cultivar-group)]
gi|38345576|emb|CAE01775.2| OSJNBa0027H06.12 [Oryza
sativa (japonica cultivar-group)]
Length = 441
Score = 117 bits (294), Expect = 5e-26
Identities = 57/121 (47%), Positives = 82/121 (67%), Gaps = 8/121 (6%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP----FKARHPDEANLF 56
M +R KV+VYEEGE P++H+GP K +Y+IEG F+++++ S + P A+ F
Sbjct: 100 MERRFKVYVYEEGEPPILHEGPCKNIYTIEGSFIEQLELMSPSDAGGGVRTWDPTRAHAF 159
Query: 57 LIPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCH 116
+PFS+S +V++VY P QD L+ +V DYV VVA ++P+WNRS GADHF+LSCH
Sbjct: 160 FLPFSVSQMVKFVYRP--PSQDR--APLRAIVADYVRVVAARHPFWNRSAGADHFMLSCH 215
Query: 117 D 117
D
Sbjct: 216 D 216
>ref|NP_910586.1| Similar to Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11
(AL022537) [Oryza sativa (japonica cultivar-group)]
gi|34898460|ref|NP_910576.1| Similar to Arabidopsis
thaliana DNA chromosome 4, BAC clone F4D11 (AL022537)
[Oryza sativa (japonica cultivar-group)]
Length = 919
Score = 113 bits (282), Expect = 1e-24
Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKAR--HPDEANLFLI 58
M +R KV+VYEEGE P+ H+GP K +Y++EG+F++E++ R P A+ +
Sbjct: 526 MERRFKVYVYEEGEPPIAHEGPCKNIYAVEGRFIEELELMAPPLGGVRTWDPARAHALFL 585
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
P S+S +VQ Y P+ Y L L+ +V DYV VVA ++ +WNRS GADHF+LSCHD
Sbjct: 586 PLSVSQMVQLAYRPL----SYDLSPLRAIVADYVAVVASRHRFWNRSAGADHFMLSCHD 640
>dbj|BAD44823.1| putative pectin-glucuronyltransferase [Oryza sativa (japonica
cultivar-group)] gi|52075645|dbj|BAD44815.1| putative
pectin-glucuronyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 514
Score = 113 bits (282), Expect = 1e-24
Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKAR--HPDEANLFLI 58
M +R KV+VYEEGE P+ H+GP K +Y++EG+F++E++ R P A+ +
Sbjct: 134 MERRFKVYVYEEGEPPIAHEGPCKNIYAVEGRFIEELELMAPPLGGVRTWDPARAHALFL 193
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
P S+S +VQ Y P+ Y L L+ +V DYV VVA ++ +WNRS GADHF+LSCHD
Sbjct: 194 PLSVSQMVQLAYRPL----SYDLSPLRAIVADYVAVVASRHRFWNRSAGADHFMLSCHD 248
>gb|AAF13080.1| hypothetical protein [Arabidopsis thaliana]
gi|15231488|ref|NP_187419.1| exostosin family protein
[Arabidopsis thaliana]
Length = 470
Score = 108 bits (270), Expect = 3e-23
Identities = 47/117 (40%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K K++VYEEG+ P+ H G K +YS+EG F++ +++ ++ R PD+A+++ +PF
Sbjct: 139 MEKMFKIYVYEEGDPPIFHYGLCKDIYSMEGLFLNFMEN-DVLKYRTRDPDKAHVYFLPF 197
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ I+ +++ P++ + L+R++ DYV +++ KYPYWN S+G DHF+LSCHD
Sbjct: 198 SVVMILHHLFDPVVRDKAV----LERVIADYVQIISKKYPYWNTSDGFDHFMLSCHD 250
>ref|NP_197954.1| exostosin family protein [Arabidopsis thaliana]
Length = 654
Score = 99.4 bits (246), Expect = 2e-20
Identities = 50/118 (42%), Positives = 78/118 (65%), Gaps = 7/118 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K LKV+ Y+EG +P++H L+G+Y+ EG FM+ I+S + F + P +A+LF +PF
Sbjct: 320 MEKILKVYAYKEGNKPIMHSPILRGIYASEGWFMNIIES-NNNKFVTKDPAKAHLFYLPF 378
Query: 61 SISNIVQYVYMPILSQQDYHLGR-LQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + +Y+ QD H R L + ++DY+ ++ KYP+WNR++GADHFL +CHD
Sbjct: 379 SSRMLEVTLYV-----QDSHSHRNLIKYLKDYIDFISAKYPFWNRTSGADHFLAACHD 431
>gb|AAM64263.1| unknown [Arabidopsis thaliana]
Length = 273
Score = 99.0 bits (245), Expect = 2e-20
Identities = 41/113 (36%), Positives = 80/113 (70%), Gaps = 6/113 (5%)
Query: 5 LKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPFSISN 64
LKV++Y +G++P+ H+ L G+Y+ EG FM ++S + F ++P++A+LF +P+S+
Sbjct: 159 LKVYIYPDGDKPIFHEPHLNGIYASEGWFMKLMES--NTQFVTKNPEKAHLFYMPYSVKQ 216
Query: 65 IVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
+ + +++P +++ L + DYV++++ KYP+WNR++G+DHFL++CHD
Sbjct: 217 LQKSIFVP----GSHNIKPLSIFLRDYVNMLSIKYPFWNRTHGSDHFLVACHD 265
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,492,969
Number of Sequences: 2540612
Number of extensions: 8060954
Number of successful extensions: 14957
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 14823
Number of HSP's gapped (non-prelim): 81
length of query: 117
length of database: 863,360,394
effective HSP length: 93
effective length of query: 24
effective length of database: 627,083,478
effective search space: 15050003472
effective search space used: 15050003472
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0030.13