Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0028b.5
         (1389 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_908404.1| putative co-repressor protein [Oryza sativa (ja...  1294  0.0
ref|XP_549869.1| transcriptional co-repressor -like [Oryza sativ...  1219  0.0
ref|NP_173829.2| paired amphipathic helix repeat-containing prot...  1154  0.0
pir||T00649 hypothetical protein F3I6.12 - Arabidopsis thaliana ...  1109  0.0
ref|NP_186781.3| paired amphipathic helix repeat-containing prot...  1096  0.0
emb|CAC01821.1| transcriptional regulatory-like protein [Arabido...  1056  0.0
gb|AAF03494.1| unknown protein [Arabidopsis thaliana]                1035  0.0
ref|NP_177163.2| paired amphipathic helix repeat-containing prot...   866  0.0
pir||C96723 hypothetical protein F20P5.21 [imported] - Arabidops...   857  0.0
ref|XP_493857.1| Similar to Arabidopsis chromosome I BAC genomic...   503  e-140
ref|NP_176197.2| paired amphipathic helix repeat-containing prot...   452  e-125
dbj|BAC43533.1| putative transcriptional regulatory protein [Ara...   451  e-125
ref|NP_172515.1| paired amphipathic helix repeat-containing prot...   442  e-122
gb|AAD39565.1| T10O24.5 [Arabidopsis thaliana] gi|25402600|pir||...   434  e-120
gb|AAD39330.1| Hypothetical protein [Arabidopsis thaliana] gi|25...   397  e-108
ref|XP_640783.1| hypothetical protein DDB0216409 [Dictyostelium ...   213  3e-53
gb|AAN74748.1| hypothetical protein [Marchantia polymorpha]           212  6e-53
gb|AAO72669.1| unknown [Oryza sativa (japonica cultivar-group)]       203  3e-50
ref|NP_033214.1| transcriptional regulator, SIN3B [Mus musculus]...   198  1e-48
gb|EAL25992.1| GA21341-PA [Drosophila pseudoobscura]                  190  3e-46

>ref|NP_908404.1| putative co-repressor protein [Oryza sativa (japonica
            cultivar-group)]
          Length = 1589

 Score = 1294 bits (3349), Expect = 0.0
 Identities = 740/1368 (54%), Positives = 913/1368 (66%), Gaps = 117/1368 (8%)

Query: 1    IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
            IDT GVI RVK LF G+ +LILGFNTFLPKGY I L  E      KKPV+F EAINFVNK
Sbjct: 279  IDTNGVIIRVKTLFNGYPELILGFNTFLPKGYAIKLQEE------KKPVDFVEAINFVNK 332

Query: 61   IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
            IK RF+ D+HVYK+FLDILNMYRK+NK I +VYHEVAVLF  H DLL+EF HFLPD S  
Sbjct: 333  IKNRFQHDEHVYKAFLDILNMYRKDNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTSVP 392

Query: 121  ASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRAE 180
              +   S       DR S +P   +    KR++    H DR+ SVDRPD DH        
Sbjct: 393  PQAVAPSRPGIRRDDRTSLVPPASRNE--KRDKAH-PHADRE-SVDRPDLDH-------- 440

Query: 181  KEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLLDA 240
              QRRR +   D+ + G +D E D +D   D G  R+    K +    A+     PL   
Sbjct: 441  VIQRRRPKDRHDY-DRGDKDGELDSKDL--DIGLKRKPFPRKMEDPTSADAHHGGPL--- 494

Query: 241  DEFFGTRPMSSTC-DDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEIIT 299
             E  G    S++  D+K +LK+ Y +EF FC+KVKEKL + D YQEFLKCLHIYS+EIIT
Sbjct: 495  -ENHGILGASASLYDNKDALKSVYTQEFHFCEKVKEKLEH-DAYQEFLKCLHIYSQEIIT 552

Query: 300  QQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDGGFLAGVMNKKS-----LWIEGPGLKP 354
            + EL++LV D+L ++PDLM+ FNEFL   E  DG FLAGV +KKS        EG   + 
Sbjct: 553  RSELKNLVNDILQQHPDLMDGFNEFLEHCENIDG-FLAGVFSKKSHVNTNYINEGQTGRI 611

Query: 355  MKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPINELDL 414
            +K E+R           D +++         +  V S+KE        K+  KP++ELDL
Sbjct: 612  VKTEERKEGGKGTEKEPDRIEKVPAYKEAPSQKPVFSSKE--------KYIYKPVSELDL 663

Query: 415  SNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEES 474
            SNC RCTPSYRLLPK+YP+P A  K+++GA VLNDHWVSVTSGSEDYSFKHMRKNQYEES
Sbjct: 664  SNCQRCTPSYRLLPKHYPMPPAGNKTELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEES 723

Query: 475  LFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTALNLRCIERL 534
            LFRCEDDRFELDMLLESVN  TKRVEEL EK+ +N +K D P+RIDEHLT LNLRCIERL
Sbjct: 724  LFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSLKPDSPIRIDEHLTPLNLRCIERL 783

Query: 535  YGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHR 594
            YGDHGLDVM+VLRKNA +ALPVILTRLKQKQ+EW+RCR+DF+KVWAEIYAKNYHKSLDHR
Sbjct: 784  YGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHR 843

Query: 595  SFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIH 654
            SFYFKQQDTK LSTK+LL E+KEI+EKK KEDDVLLAIAAG+R+PI+PN+ F Y D +IH
Sbjct: 844  SFYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIH 903

Query: 655  EDLYQLVKYSCGELCTA-EQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVKAKNTEDV 713
            ED+Y+++KYSCGE+C++ +QLDKV+++WTTFLEP+L V  R  GAED           D 
Sbjct: 904  EDMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAEDA----------DA 953

Query: 714  VNTENNSVKSGIVSVAESGDSKAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQHGKTN 773
            V  ++ + KSG+ +V E                             T  AG   +HG   
Sbjct: 954  VKPKSRTTKSGLATVGE---------------------------INTTAAGAVAKHGH-- 984

Query: 774  IIGFTPDELSGVNKQNQSSERLVNANVSPASGMEQSNGRTKIDNTSGHTATPSGNGNTSV 833
                  DE     +   S  R+VN   +     +  NG   +D T+     PS   NT+V
Sbjct: 985  ------DENIPQEQTPSSLARMVNGVAT-----DTQNGFHDVDRTARRAEEPS---NTAV 1030

Query: 834  EG---GLELPSSEPILFQTRKFPSNYSIFSLMLDILINFGLHLHECILQRILFVKHPSYG 890
             G   G    ++E     T+  P+  S  ++ +      G           +     S+ 
Sbjct: 1031 NGRVQGASPGTNEIPAVSTQNMPTERSAENIPVARTEQHGNAKANLEPTSGVNASRSSHA 1090

Query: 891  WLMILVVDISSRFQIR--QGGDSTRPG-TFTNGATTGGTEVHRYQEQSIRHF--KSEREE 945
                     +    +   +GG++ R G T   G  + G +   + E S  H   K EREE
Sbjct: 1091 GNDTAAEARAGNETLPSVEGGETGRSGSTLNGGGASEGNKGRLFNEASASHNTPKVEREE 1150

Query: 946  GELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQV--CCEAKGENDVDAD 1003
            GELSPNGD EEDNFA +E+  +D   K K G  S+ +Q R GE    C EA GEND DAD
Sbjct: 1151 GELSPNGDFEEDNFAPFEDGAVDGVSKAKEGSTSRPFQGRSGEAQPSCAEAAGENDADAD 1210

Query: 1004 DEGEESPHRSSDDSENASEN-VDVSGSESADGEECSREEH----EDREHDN---KAESEG 1055
            DEGEES  RS++DSENASE   D SGSES DGEECSRE+H    ED +HD+   KAESEG
Sbjct: 1211 DEGEESAQRSTEDSENASEGGEDASGSESGDGEECSREDHDEEEEDMDHDDQDAKAESEG 1270

Query: 1056 EAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAALHEKD-RNSQVFYGSDSFYVLF 1114
            EAEG  + HDVEG G+SL +SERFL +VKPLAK+VP ALH++D ++S++FYG+DSFYVLF
Sbjct: 1271 EAEGTTETHDVEG-GISLPLSERFLHSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLF 1329

Query: 1115 RLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDC 1174
            RLHQ LYER+ SAK NSSSAEKKW+ S DT   D Y +F++ALY+LLDGSSDNTKFEDDC
Sbjct: 1330 RLHQILYERLLSAKTNSSSAEKKWRTSKDTNPPDLYAKFISALYNLLDGSSDNTKFEDDC 1389

Query: 1175 RAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHEN 1234
            R+IIGTQSY+LFTLDKLIYK+VKQLQAIA++EMDNKLLQLY YEKSR  G+F D+VYHEN
Sbjct: 1390 RSIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDNKLLQLYLYEKSRSPGRFFDLVYHEN 1449

Query: 1235 ACVILHEENIYRIEYSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDK 1294
            A V+LHEE+IYR E    P KLSIQLM+ GH+KPEVTAVS+DP FS+YL N++LS + D+
Sbjct: 1450 ARVLLHEESIYRFECCSNPTKLSIQLMEYGHEKPEVTAVSIDPNFSSYLFNEYLSSMSDR 1509

Query: 1295 KEKSRLFLKRNKHRYAGSSEFSS--QAMEGLQVFNGLECKIACSSSKV 1340
            K    +FL+RNK +++ + E S   +AM+G++V NGLECKI+C +SKV
Sbjct: 1510 KLSEGVFLERNKRKHSNNDEPSDSLKAMDGVKVANGLECKISCKTSKV 1557



 Score =  640 bits (1651), Expect = 0.0
 Identities = 391/898 (43%), Positives = 516/898 (56%), Gaps = 111/898 (12%)

Query: 43   PPAKKP---------VEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVY 93
            PPA+ P         +   +A+ ++  +K +F+     Y+ FL+++  ++ E    N V 
Sbjct: 226  PPAQPPAGGATAGQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVI 285

Query: 94   HEVAVLFQGHADLLDEFTHFLPDASAA------------------------------ASS 123
              V  LF G+ +L+  F  FLP   A                                  
Sbjct: 286  IRVKTLFNGYPELILGFNTFLPKGYAIKLQEEKKPVDFVEAINFVNKIKNRFQHDEHVYK 345

Query: 124  YYMSARNSVLRDRRSAMPTVRQAHV-------------------------VKRERTTVSH 158
             ++   N   +D +S      +  V                         V   R  +  
Sbjct: 346  AFLDILNMYRKDNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTSVPPQAVAPSRPGIRR 405

Query: 159  CDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDH-----REDGKRDWERDGRDHEHDG- 212
             DR   V     +  R       ++      + DH     R   + D++R  +D E D  
Sbjct: 406  DDRTSLVPPASRNEKRDKAHPHADRESVDRPDLDHVIQRRRPKDRHDYDRGDKDGELDSK 465

Query: 213  ----GQYRERLSHKRKSDRKAEDFGAEPLLDADEFFGTRPMSSTCDDKKSLKTKYPEEFA 268
                G  R+    K +    A+     P L+     G    +S  D+K +LK+ Y +EF 
Sbjct: 466  DLDIGLKRKPFPRKMEDPTSADAHHGGP-LENHGILGA--SASLYDNKDALKSVYTQEFH 522

Query: 269  FCDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLMEEFNEFLVQA 328
            FC+KVKEKL + D YQEFLKCLHIYS+EIIT+ EL++LV D+L ++PDLM+ FNEFL   
Sbjct: 523  FCEKVKEKLEH-DAYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHC 581

Query: 329  EKNDGGFLAGVMNKKS-----LWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECRE 383
            E  D GFLAGV +KKS        EG   + +K E+R              KE DR  + 
Sbjct: 582  ENID-GFLAGVFSKKSHVNTNYINEGQTGRIVKTEERKEGGKGTE------KEPDRIEKV 634

Query: 384  RDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIG 443
                   S K V     K+K+  KP++ELDLSNC RCTPSYRLLPK+YP+P A  K+++G
Sbjct: 635  PAYKEAPSQKPV--FSSKEKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKTELG 692

Query: 444  AKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELF 503
            A VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN  TKRVEEL 
Sbjct: 693  ASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELI 752

Query: 504  EKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQ 563
            EK+ +N +K D P+RIDEHLT LNLRCIERLYGDHGLDVM+VLRKNA +ALPVILTRLKQ
Sbjct: 753  EKMQDNSLKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQ 812

Query: 564  KQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKH 623
            KQ+EW+RCR+DF+KVWAEIYAKNYHKSLDHRSFYFKQQDTK LSTK+LL E+KEI+EKK 
Sbjct: 813  KQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKR 872

Query: 624  KEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELC-TAEQLDKVMKVWT 682
            KEDDVLLAIAAG+R+PI+PN+ F Y D +IHED+Y+++KYSCGE+C +++QLDKV+++WT
Sbjct: 873  KEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVVRIWT 932

Query: 683  TFLEPMLCVPSRAQGAEDTEDV-VKAKNTEDVVNT--ENNSVKSGIVS---------VAE 730
            TFLEP+L V  R  GAED + V  K++ T+  + T  E N+  +G V+           +
Sbjct: 933  TFLEPILGVQPRTHGAEDADAVKPKSRTTKSGLATVGEINTTAAGAVAKHGHDENIPQEQ 992

Query: 731  SGDSKAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQ 790
            +  S A  +NG +   ++   D D T  + E   N   +G+        +E+  V+ QN 
Sbjct: 993  TPSSLARMVNGVATDTQNGFHDVDRTARRAEEPSNTAVNGRVQGASPGTNEIPAVSTQNM 1052

Query: 791  SSERLVNANVSPASGMEQSNGRTKIDNTSGHTATPSGN--GNTSVE---GGLELPSSE 843
             +ER    N+  A   +  N +  ++ TSG  A+ S +   +T+ E   G   LPS E
Sbjct: 1053 PTERSAE-NIPVARTEQHGNAKANLEPTSGVNASRSSHAGNDTAAEARAGNETLPSVE 1109



 Score = 39.3 bits (90), Expect = 0.95
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 48  PVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLL 107
           P+ FE+++ FV K+KA    +  +Y S  DIL           E Y E+ +LFQ + DL 
Sbjct: 13  PLTFEDSLRFVKKVKAC---NYMLYLSLFDILGRMELSRL---EAYRELQLLFQNYPDLH 66

Query: 108 DEFTHFLP 115
           +E   F P
Sbjct: 67  EELEKFRP 74


>ref|XP_549869.1| transcriptional co-repressor -like [Oryza sativa (japonica
            cultivar-group)] gi|52076211|dbj|BAD44865.1|
            transcriptional co-repressor -like [Oryza sativa
            (japonica cultivar-group)]
          Length = 1243

 Score = 1219 bits (3154), Expect = 0.0
 Identities = 699/1331 (52%), Positives = 876/1331 (65%), Gaps = 113/1331 (8%)

Query: 81   MYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAAASSYYMSARNSVLRDRRSAM 140
            MYRK+NK I +VYHEVAVLF  H DLL+EF HFLPD S    +   S       DR S +
Sbjct: 1    MYRKDNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTSVPPQAVAPSRPGIRRDDRTSLV 60

Query: 141  PTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRD 200
            P   +    KR++    H DR+ SVDRPD DH          QRRR +   D+ + G +D
Sbjct: 61   PPASRNE--KRDKAH-PHADRE-SVDRPDLDH--------VIQRRRPKDRHDY-DRGDKD 107

Query: 201  WERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLLDADEFFGTRPMSSTC-DDKKSL 259
             E D +D   D G  R+    K +    A+     PL    E  G    S++  D+K +L
Sbjct: 108  GELDSKDL--DIGLKRKPFPRKMEDPTSADAHHGGPL----ENHGILGASASLYDNKDAL 161

Query: 260  KTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLME 319
            K+ Y +EF FC+KVKEKL + D YQEFLKCLHIYS+EIIT+ EL++LV D+L ++PDLM+
Sbjct: 162  KSVYTQEFHFCEKVKEKLEH-DAYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMD 220

Query: 320  EFNEFLVQAEKNDGGFLAGVMNKKSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDR 379
             FNEFL   E  DG FLAGV +K+         + +K E+R           D +++   
Sbjct: 221  GFNEFLEHCENIDG-FLAGVFSKRQTG------RIVKTEERKEGGKGTEKEPDRIEKVPA 273

Query: 380  ECRERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYK 439
                  +  V S+KE        K+  KP++ELDLSNC RCTPSYRLLPK+YP+P A  K
Sbjct: 274  YKEAPSQKPVFSSKE--------KYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNK 325

Query: 440  SKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRV 499
            +++GA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN  TKRV
Sbjct: 326  TELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRV 385

Query: 500  EELFEKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILT 559
            EEL EK+ +N +K D P+RIDEHLT LNLRCIERLYGDHGLDVM+VLRKNA +ALPVILT
Sbjct: 386  EELIEKMQDNSLKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILT 445

Query: 560  RLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEIS 619
            RLKQKQ+EW+RCR+DF+KVWAEIYAKNYHKSLDHRSFYFKQQDTK LSTK+LL E+KEI+
Sbjct: 446  RLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEIN 505

Query: 620  EKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTA-EQLDKVM 678
            EKK KEDDVLLAIAAG+R+PI+PN+ F Y D +IHED+Y+++KYSCGE+C++ +QLDKV+
Sbjct: 506  EKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVV 565

Query: 679  KVWTTFLEPMLCVPSRAQGAEDTEDVVKAKNTEDVVNTENNSVKSGIVSVAESGDSKAWQ 738
            ++WTTFLEP+L V  R  GAED           D V  ++ + KSG+ +V E        
Sbjct: 566  RIWTTFLEPILGVQPRTHGAEDA----------DAVKPKSRTTKSGLATVGE-------- 607

Query: 739  LNGDSGVREDRCLDSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQSSERLVNA 798
                                 T  AG   +HG         DE     +   S  R+VN 
Sbjct: 608  -------------------INTTAAGAVAKHGH--------DENIPQEQTPSSLARMVNG 640

Query: 799  NVSPASGMEQSNGRTKIDNTSGHTATPSGNGNTSVEG---GLELPSSEPILFQTRKFPSN 855
              +     +  NG   +D T+     PS   NT+V G   G    ++E     T+  P+ 
Sbjct: 641  VAT-----DTQNGFHDVDRTARRAEEPS---NTAVNGRVQGASPGTNEIPAVSTQNMPTE 692

Query: 856  YSIFSLMLDILINFGLHLHECILQRILFVKHPSYGWLMILVVDISSRFQIR--QGGDSTR 913
             S  ++ +      G           +     S+          +    +   +GG++ R
Sbjct: 693  RSAENIPVARTEQHGNAKANLEPTSGVNASRSSHAGNDTAAEARAGNETLPSVEGGETGR 752

Query: 914  PG-TFTNGATTGGTEVHRYQEQSIRHF--KSEREEGELSPNGDMEEDNFAVYENSGLDAG 970
             G T   G  + G +   + E S  H   K EREEGELSPNGD EEDNFA +E+  +D  
Sbjct: 753  SGSTLNGGGASEGNKGRLFNEASASHNTPKVEREEGELSPNGDFEEDNFAPFEDGAVDGV 812

Query: 971  HKGKGGDMSQKYQSRHGEQV--CCEAKGENDVDADDEGEESPHRSSDDSENASEN-VDVS 1027
             K K G  S+ +Q R GE    C EA GEND DADDEGEES  RS++DSENASE   D S
Sbjct: 813  SKAKEGSTSRPFQGRSGEAQPSCAEAAGENDADADDEGEESAQRSTEDSENASEGGEDAS 872

Query: 1028 GSESADGEECSREEH----EDREHDN---KAESEGEAEGMVDAHDVEGDGMSLTISERFL 1080
            GSES DGEECSRE+H    ED +HD+   KAESEGEAEG  + HDVEG G+SL +SERFL
Sbjct: 873  GSESGDGEECSREDHDEEEEDMDHDDQDAKAESEGEAEGTTETHDVEG-GISLPLSERFL 931

Query: 1081 QTVKPLAKYVPAALHEKD-RNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWK 1139
             +VKPLAK+VP ALH++D ++S++FYG+DSFYVLFRLHQ LYER+ SAK NSSSAEKKW+
Sbjct: 932  HSVKPLAKHVPTALHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWR 991

Query: 1140 ASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQL 1199
             S DT   D Y +F++ALY+LLDGSSDNTKFEDDCR+IIGTQSY+LFTLDKLIYK+VKQL
Sbjct: 992  TSKDTNPPDLYAKFISALYNLLDGSSDNTKFEDDCRSIIGTQSYVLFTLDKLIYKVVKQL 1051

Query: 1200 QAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQ 1259
            QAIA++EMDNKLLQLY YEKSR  G+F D+VYHENA V+LHEE+IYR E    P KLSIQ
Sbjct: 1052 QAIATDEMDNKLLQLYLYEKSRSPGRFFDLVYHENARVLLHEESIYRFECCSNPTKLSIQ 1111

Query: 1260 LMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFSS-- 1317
            LM+ GH+KPEVTAVS+DP FS+YL N++LS + D+K    +FL+RNK +++ + E S   
Sbjct: 1112 LMEYGHEKPEVTAVSIDPNFSSYLFNEYLSSMSDRKLSEGVFLERNKRKHSNNDEPSDSL 1171

Query: 1318 QAMEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSNIRS 1377
            +AM+G++V NGLECKI+C +SKVSYVLDTED L+R + KRR   P  +  E  ++S   +
Sbjct: 1172 KAMDGVKVANGLECKISCKTSKVSYVLDTEDFLFRLR-KRRRFSPVGNVPEKLQASKTYA 1230

Query: 1378 SRALRFCKLFS 1388
            ++  RF +  S
Sbjct: 1231 AKVQRFHRFLS 1241



 Score = 38.9 bits (89), Expect = 1.2
 Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 2/64 (3%)

Query: 51  FEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEF 110
           + +  +F  K+K + E D   Y+ FL  L++Y +E    +E+ + V  + Q H DL+D F
Sbjct: 165 YTQEFHFCEKVKEKLEHD--AYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGF 222

Query: 111 THFL 114
             FL
Sbjct: 223 NEFL 226


>ref|NP_173829.2| paired amphipathic helix repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1353

 Score = 1154 bits (2986), Expect = 0.0
 Identities = 702/1394 (50%), Positives = 892/1394 (63%), Gaps = 166/1394 (11%)

Query: 1    IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
            +DTAGVI RVKELF+GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNK
Sbjct: 71   VDTAGVITRVKELFKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNK 130

Query: 61   IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
            IK RF+GDD VYKSFLDILNMYR+++K I EVY EVA+LF+ H+DLL EFTHFLPD SA 
Sbjct: 131  IKTRFQGDDRVYKSFLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSAT 190

Query: 121  ASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRAE 180
            AS                 +P+V+ +    RER  VS  D+   +  P PDHD G    +
Sbjct: 191  AS-----------------IPSVKTS---VRERG-VSLADKKDRIITPHPDHDYGTEHID 229

Query: 181  KEQRRRVEKE-KDH-REDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLL 238
            +++ R ++KE K+H R   K +  RD RD E    +  + L+ K+K   + +D     + 
Sbjct: 230  QDRERPIKKENKEHMRGTNKENEHRDARDFEPHSKK-EQFLNKKQKLHIRGDD--PAEIS 286

Query: 239  DADEFFGTRPMSSTCDDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEII 298
            +  +  G  P SST D+K ++K+ Y ++ A  D+VKEKL N   YQEFL+CL+++SKEII
Sbjct: 287  NQSKLSGAVPSSSTYDEKGAMKS-YSQDLAIVDRVKEKL-NASEYQEFLRCLNLFSKEII 344

Query: 299  TQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDGGFLAGVMNK-KSLWI-EGPGLKPMK 356
            ++ ELQSLVG+L+G YPDLM+ F EFLVQ EKN+G  L+G++ K KS ++ +G G  P  
Sbjct: 345  SRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKNEG-LLSGILTKSKSTYLLQGEGKYPQP 403

Query: 357  AEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSN 416
            + D DRD++  R  DDG+++RD E +ER        K  + LK     + KPI+ELDLSN
Sbjct: 404  SLDNDRDQEHKR--DDGLRDRDHE-KER------LEKAAANLK-----WAKPISELDLSN 449

Query: 417  CDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF 476
            C++CTPSYRLLPKNYPI IAS K++IG  VLNDHWVSVTSGSEDYSF HMRKNQYEESLF
Sbjct: 450  CEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLF 509

Query: 477  RCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTALNLRCIERLYG 536
            +CEDDRFELDMLLESVN TTK VEEL  KIN+N +K + P+R+++HLTALNLRCIERLYG
Sbjct: 510  KCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERLYG 569

Query: 537  DHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSF 596
            DHGLDVM+VL+KN  LALPVILTRLKQKQ+EWARCR+DF KVWAEIYAKNY+KSLDHRSF
Sbjct: 570  DHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHRSF 629

Query: 597  YFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHED 656
            YFKQQD+K+LS KALLAE+KEI+EKK +EDD LLA AAG+R  I P+LEF YPD D+HED
Sbjct: 630  YFKQQDSKKLSMKALLAEIKEITEKK-REDDSLLAFAAGNRLSISPDLEFDYPDHDLHED 688

Query: 657  LYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVKAKNTEDVVNT 716
            LYQL+KYSC E+C+ EQLDKVMK+WTTF+E +  VPSR QGAED EDVVK+ N     N 
Sbjct: 689  LYQLIKYSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQ----NV 744

Query: 717  ENNSVKSG--------IVSVAESGDSK-AWQLNGDSGVREDRCLDSDHTVYKTETAGNNT 767
            ++ S  +G          SVA+S  SK + + N  S + +    + D    +T  A   T
Sbjct: 745  KSGSSSAGESEGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSERDGAAGRTSDALCET 804

Query: 768  -QHGKTNIIGFTPDELSGVNKQNQSSERLVNANVSPASG-MEQSNGRTKIDNTSGHTATP 825
             QH K      T DE    +KQ  S ER  ++      G ++QSNG + I + +GH    
Sbjct: 805  AQHEKMLKNVVTSDE-KPESKQAVSIERAHDSTALAVDGLLDQSNGGSSIVHMTGH---- 859

Query: 826  SGNGNTSVEGGLELPSSEPILFQTRKFPSNYSIFSLMLDILINFGLHLHECILQRILFVK 885
              N    V  G EL        + +    N     +    L+  G+ +     Q +    
Sbjct: 860  CNNNLKPVTCGTEL--------ELKMNDGNGPKLEVGNKKLLTNGIAVEITSDQEMAGTS 911

Query: 886  HPSYGWLMILVVDISSRFQIRQGGDSTRPGTF--TNGATTGGTEVHRY---QEQSIRHFK 940
                                R+ G+ +  G F   N A    T+   +    + +  +  
Sbjct: 912  KVE-----------------REEGELSPNGDFEEDNFAVYAKTDFETFSKANDSTGNNIS 954

Query: 941  SER-EEGELS-----PNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEA 994
             +R  EGE S        D E D  A    S  D+ ++ + GD+S   +S  GE      
Sbjct: 955  GDRSREGEPSCLETRAENDAEGDENAA--RSSEDSRNEYENGDVSGT-ESGGGED----- 1006

Query: 995  KGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGE-ECSREEHEDREHDNKAES 1053
              E+D+D +++GE                        ++GE EC  + H+       AE 
Sbjct: 1007 -PEDDLDNNNKGE------------------------SEGEAECMADAHD-------AEE 1034

Query: 1054 EGEAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPA--ALHEKD----RNSQVFYGS 1107
             G A               L +S RFL  VKPL KYVP+  ALH+KD    +NSQVFYG+
Sbjct: 1035 NGSA---------------LPVSARFLLHVKPLVKYVPSAIALHDKDKDSLKNSQVFYGN 1079

Query: 1108 DSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDN 1167
            DSFYVLFRLH+ LYERI SAK NSSS E KW+ S+    TD Y RFM ALY+LLDG+SDN
Sbjct: 1080 DSFYVLFRLHRILYERILSAKVNSSSPEGKWRTSNTKNPTDSYARFMTALYNLLDGTSDN 1139

Query: 1168 TKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFI 1227
             KFEDDCRAIIGTQSY+LFTLDKLI+K +K LQ + ++EMDNKLLQLY YEKSR+     
Sbjct: 1140 AKFEDDCRAIIGTQSYILFTLDKLIHKFIKHLQVVVADEMDNKLLQLYFYEKSRRPETIF 1199

Query: 1228 DIVYHENACVILHEENIYRIEYS-PGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHND 1286
            D VY++N  V+L +ENIYRIE     P KLSIQLM  G DKP+VT+VS+DP F+ YLHND
Sbjct: 1200 DAVYYDNTRVLLPDENIYRIECRLSTPAKLSIQLMCNGLDKPDVTSVSIDPTFAAYLHND 1259

Query: 1287 FLSVVPDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQVFNGLECKIACSSSKVSYVLDT 1346
            FLS+ P+ +E  R++L RNK +     E    + + +++ NGLECKIAC SSKVSYVL+T
Sbjct: 1260 FLSIQPNAREDRRIYLNRNKRKVCREDE-QLYSTDEVKIKNGLECKIACGSSKVSYVLET 1318

Query: 1347 EDVLYRKKSKRRIL 1360
            ED+L R K +R+ L
Sbjct: 1319 EDLLVRVKKRRKTL 1332


>pir||T00649 hypothetical protein F3I6.12 - Arabidopsis thaliana
            gi|2829870|gb|AAC00578.1| Hypothetical protein
            [Arabidopsis thaliana]
          Length = 1263

 Score = 1109 bits (2869), Expect = 0.0
 Identities = 676/1348 (50%), Positives = 853/1348 (63%), Gaps = 176/1348 (13%)

Query: 1    IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
            +DTAGVI RVKELF+GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNK
Sbjct: 48   VDTAGVITRVKELFKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNK 107

Query: 61   IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
            IK RF+GDD VYKSFLDILNMYR+++K I EVY EVA+LF+ H+DLL EFTHFLPD SA 
Sbjct: 108  IKTRFQGDDRVYKSFLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSAT 167

Query: 121  ASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRAE 180
            AS                 +P+V+ +    RER  VS  D+   +  P PDHD G    +
Sbjct: 168  AS-----------------IPSVKTS---VRERG-VSLADKKDRIITPHPDHDYGTEHID 206

Query: 181  KEQRRRVEKE-KDH-REDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLL 238
            +++ R ++KE K+H R   K +  RD RD E    +  + L+ K+K   + +D     + 
Sbjct: 207  QDRERPIKKENKEHMRGTNKENEHRDARDFEPHSKK-EQFLNKKQKLHIRGDD--PAEIS 263

Query: 239  DADEFFGTRPMSSTCDDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEII 298
            +  +  G  P SST D+K ++K+ Y ++ A  D+VKEKL N   YQEFL+CL+++SKEII
Sbjct: 264  NQSKLSGAVPSSSTYDEKGAMKS-YSQDLAIVDRVKEKL-NASEYQEFLRCLNLFSKEII 321

Query: 299  TQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDG------------GFLAGVMNKKSLW 346
            ++ ELQSLVG+L+G YPDLM+ F EFLVQ EKN+             G L+G++ KKSLW
Sbjct: 322  SRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKNEKRQICNLLNLLAEGLLSGILTKKSLW 381

Query: 347  IEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFL 406
             EG   +P      D DRD++  RDDG+++RD E +ER        K  + LK     + 
Sbjct: 382  SEGKYPQP----SLDNDRDQEHKRDDGLRDRDHE-KER------LEKAAANLK-----WA 425

Query: 407  KPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHM 466
            KPI+ELDLSNC++CTPSYRLLPKNYPI IAS K++IG  VLNDHWVSVTSGSEDYSF HM
Sbjct: 426  KPISELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHM 485

Query: 467  RKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTAL 526
            RKNQYEESLF+CEDDRFELDMLLESVN TTK VEEL  KIN+N +K + P+R+++HLTAL
Sbjct: 486  RKNQYEESLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTAL 545

Query: 527  NLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKN 586
            NLRCIERLYGDHGLDVM+VL+KN  LALPVILTRLKQKQ+EWARCR+DF KVWAEIYAKN
Sbjct: 546  NLRCIERLYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKN 605

Query: 587  YHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEF 646
            Y+KSLDHRSFYFKQQD+K+LS KALLAE+KEI+EKK +EDD LLA AAG+R  I P+LEF
Sbjct: 606  YYKSLDHRSFYFKQQDSKKLSMKALLAEIKEITEKK-REDDSLLAFAAGNRLSISPDLEF 664

Query: 647  HYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVK 706
             YPD D+HEDLYQL+KYSC E+C+ EQLDKVMK+WTTF+E +  VPSR QGAED EDVVK
Sbjct: 665  DYPDHDLHEDLYQLIKYSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVK 724

Query: 707  AKNTEDVVNTENNSVKSG--------IVSVAESGDSK-AWQLNGDSGVREDRCLDSDHTV 757
            + N     N ++ S  +G          SVA+S  SK + + N  S + +    + D   
Sbjct: 725  SMNQ----NVKSGSSSAGESEGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSERDGAA 780

Query: 758  YKTETAGNNT-QHGKTNIIGFTPDELSGVNKQNQSSERLVNANVSPASG-MEQSNGRTKI 815
             +T  A   T QH K      T DE    +KQ  S ER  ++      G ++QSNG + I
Sbjct: 781  GRTSDALCETAQHEKMLKNVVTSDE-KPESKQAVSIERAHDSTALAVDGLLDQSNGGSSI 839

Query: 816  DNTSGHTATPSGNGNTSVEGGLELPSSEPILFQTRKFPSNYSIFSLMLDILINFGLHLHE 875
             + +GH      N    V  G EL        + +    N     +    L+  G+ +  
Sbjct: 840  VHMTGH----CNNNLKPVTCGTEL--------ELKMNDGNGPKLEVGNKKLLTNGIAVEI 887

Query: 876  CILQRILFVKHPSYGWLMILVVDISSRFQIRQGGDSTRPGTF--TNGATTGGTEVHRY-- 931
               Q +                        R+ G+ +  G F   N A    T+   +  
Sbjct: 888  TSDQEMAGTSKVE-----------------REEGELSPNGDFEEDNFAVYAKTDFETFSK 930

Query: 932  -QEQSIRHFKSER-EEGELS-----PNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQS 984
              + +  +   +R  EGE S        D E D  A    S  D+ ++ + GD+S   +S
Sbjct: 931  ANDSTGNNISGDRSREGEPSCLETRAENDAEGDENAA--RSSEDSRNEYENGDVSGT-ES 987

Query: 985  RHGEQVCCEAKGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGE-ECSREEHE 1043
              GE        E+D+D +++GE                        ++GE EC  + H+
Sbjct: 988  GGGED------PEDDLDNNNKGE------------------------SEGEAECMADAHD 1017

Query: 1044 DREHDNKAESEGEAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPA--ALHEKD--- 1098
                   AE  G A               L +S RFL  VKPL KYVP+  ALH+KD   
Sbjct: 1018 -------AEENGSA---------------LPVSARFLLHVKPLVKYVPSAIALHDKDKDS 1055

Query: 1099 -RNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNAL 1157
             +NSQVFYG+DSFYVLFRLH+ LYERI SAK NSSS E KW+ S+    TD Y RFM AL
Sbjct: 1056 LKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRTSNTKNPTDSYARFMTAL 1115

Query: 1158 YSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAY 1217
            Y+LLDG+SDN KFEDDCRAIIGTQSY+LFTLDKLI+K +K LQ + ++EMDNKLLQLY Y
Sbjct: 1116 YNLLDGTSDNAKFEDDCRAIIGTQSYILFTLDKLIHKFIKHLQVVVADEMDNKLLQLYFY 1175

Query: 1218 EKSRKLGKFIDIVYHENACVILHEENIYRIEYS-PGPKKLSIQLMDCGHDKPEVTAVSVD 1276
            EKSR+     D VY++N  V+L +ENIYRIE     P KLSIQLM  G DKP+VT+VS+D
Sbjct: 1176 EKSRRPETIFDAVYYDNTRVLLPDENIYRIECRLSTPAKLSIQLMCNGLDKPDVTSVSID 1235

Query: 1277 PKFSTYLHNDFLSVVPDKKEKSRLFLKR 1304
            P F+ YLHNDFLS+ P+ +E  R++L R
Sbjct: 1236 PTFAAYLHNDFLSIQPNAREDRRIYLNR 1263


>ref|NP_186781.3| paired amphipathic helix repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1378

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 661/1384 (47%), Positives = 867/1384 (61%), Gaps = 145/1384 (10%)

Query: 2    DTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNKI 61
            DT GVIARVKELF+GH +LI GFNTFLPKGYEITL  ED+  P KK VEFE+AINFVNKI
Sbjct: 92   DTGGVIARVKELFKGHNNLIYGFNTFLPKGYEITLIEEDDALP-KKTVEFEQAINFVNKI 150

Query: 62   KARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAAA 121
            K RF+ D+HVYKSFL+ILNMYRKENK I EVY+EV++LFQGH DLL++FT FLP AS  +
Sbjct: 151  KMRFKHDEHVYKSFLEILNMYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLP-ASLPS 209

Query: 122  SSYYMSARNSVLR--DRRSAMPTVRQAHVVKRERTTVSHCDR-DPSVDRPDPDHDRGLLR 178
             S    +R+   +  DR S  P + Q  V K  R   +   R D SV+R D + D+ +++
Sbjct: 210  HSAAQHSRSQAQQYSDRGSDPPLLHQMQVEKERRRERAVALRGDYSVERYDLNDDKTMVK 269

Query: 179  AEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLL 238
             ++EQR+R++KE   R     D    G+D+ H           KRKS R+AE   A    
Sbjct: 270  IQREQRKRLDKENRARRGRDLDDREAGQDNLH-------HFPEKRKSSRRAEALEA---- 318

Query: 239  DADEFFGTRPMSSTCDDKKSLKT------KYPEEFAFCDKVKEKLRNPDGYQEFLKCLHI 292
                + G    S++  +K +LK        Y + F FC+KVK++L + D YQ FLKCL+I
Sbjct: 319  ----YSG----SASHSEKDNLKNVYFVLGMYKQAFVFCEKVKDRLCSQDDYQTFLKCLNI 370

Query: 293  YSKEIITQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDGGF--LAGVMNKKSLWIEGP 350
            +S  II +++LQ+LV DLLGK+PDLM+EFN+F  + E    GF  LAGVM+KK    E  
Sbjct: 371  FSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCESITDGFQRLAGVMSKKLFSSEEQ 430

Query: 351  GLKPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPIN 410
              +PMK E+++ +   +    + +KE + +C+          KE  G         K I 
Sbjct: 431  LSRPMKVEEKESEHKPEL---EAVKETE-QCK----------KEYMG---------KSIQ 467

Query: 411  ELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQ 470
            ELDLS+C+ CTPSYRLLP +YPIPIAS +S++GA+VLNDHWVSVTSGSEDYSFKHMR+NQ
Sbjct: 468  ELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQ 527

Query: 471  YEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTALNLRC 530
            YEESLFRCEDDRFELDMLLESV+   +  E L   I    I      RI++H TALNLRC
Sbjct: 528  YEESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRC 587

Query: 531  IERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKS 590
            IERLYGDHGLDV+++L KN   ALPVILTRLKQKQ EW +CR DF KVWA +YAKN++KS
Sbjct: 588  IERLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKS 647

Query: 591  LDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPD 650
            LDHRSFYFKQQD+K LS K+LLAE+KE+ EK   +DDVLL+I+AG RQPI PNLE+ Y +
Sbjct: 648  LDHRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLN 707

Query: 651  LDIHEDLYQLVKYSCGELC-TAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVKAKN 709
              IHED++++V++SC ELC T EQL KV+++W  FLE +L VP RA+G +  EDVV    
Sbjct: 708  RAIHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPK 767

Query: 710  TEDVVNTENNSVKSGIVSVAESGDSKAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQH 769
            T DV    +++  +G  +V+  GD+                        K ++A N  ++
Sbjct: 768  TLDV---NHSTSPNGEAAVSSGGDTARLASR------------------KLKSAANGDEN 806

Query: 770  GKTNIIGFTPDELSGVNKQNQSSERLVNANVSPASGMEQSNGRTKIDNTSGHTATPSGNG 829
              +   G     +  +NK +   E L +  ++   G+  S  + + +  +G+ A      
Sbjct: 807  SSS---GTFKHGIGLLNKDSTGKENLEDVEIANRDGVACSAVKPQKEQETGNEA------ 857

Query: 830  NTSVEGGLELPSSEPILFQTRKFPSNYSIFSLMLDILINFGLHLHECIL-QRILFVKHPS 888
                    E    +PI       P + S  + +  I I  G   + C++ + +L   H  
Sbjct: 858  --------EKRFGKPI-------PMDISERAAISSISIPSGAENNHCVVGKEVLPGAHEI 902

Query: 889  YGWLMILVVDIS------SRFQIRQGGDSTRPGTFTNGATTGGTEVHRYQEQSIRHFKSE 942
                   + DI             QGGD        NG  +  ++  R  +      ++E
Sbjct: 903  QAKPSDTLTDIHHDVDSIETVHSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNE 962

Query: 943  REEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGENDVDA 1002
            +EEGELSPNGD  EDNF VY++ G+ +         + K ++    +V  +A+ EN+ DA
Sbjct: 963  KEEGELSPNGDF-EDNFGVYKDHGVKS---------TSKPENSAEAEVEADAEVENEDDA 1012

Query: 1003 DDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREH------DNKAESEGE 1056
            DD           DSENASE    SG+ES  G+ CS++E  + E+      D KAESEGE
Sbjct: 1013 DDV----------DSENASE---ASGTESG-GDVCSQDEDREEENGEHDEIDGKAESEGE 1058

Query: 1057 AEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAAL-HEKDRNSQVFYGSDSFYVLFR 1115
            AEGM D H +EG+   L  SER L +V+PL+K+V A L  E+ ++ QVFYG+D FYVLFR
Sbjct: 1059 AEGM-DPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGNDDFYVLFR 1117

Query: 1116 LHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCR 1175
            LHQ LYERI  AK N S  E K K   DT + D Y RFM  LY LLDGS++NTKFED+CR
Sbjct: 1118 LHQILYERILYAKRNCSGGELKSKNLKDTNAGDPYARFMRVLYGLLDGSAENTKFEDECR 1177

Query: 1176 AIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENA 1235
            AIIG QSY+LFTLDKLIY+LVKQLQAI ++EMDNKLLQLY YEKSRK G+ ID VY+EN 
Sbjct: 1178 AIIGNQSYVLFTLDKLIYRLVKQLQAIVADEMDNKLLQLYEYEKSRKPGRVIDSVYYENV 1237

Query: 1236 CVILHEENIYRIEYSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKK 1295
             V++HEENIYR+E S  P +LSIQLMD   +KPE  AVS+DP F++Y+  + LSV   KK
Sbjct: 1238 RVLVHEENIYRLECSSLPSRLSIQLMDNIIEKPEAYAVSMDPTFASYMQTELLSVSSGKK 1297

Query: 1296 EKSR-LFLKRNKHRYAGSSEFSSQAMEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRKK 1354
            E+   + L+RN     G  +   +AMEG++V NGLECK++CSS K++YVLDTED  +RKK
Sbjct: 1298 EEGHDIVLQRN---LTGLYDL-CKAMEGVEVVNGLECKMSCSSYKIAYVLDTEDYFHRKK 1353

Query: 1355 SKRR 1358
             K++
Sbjct: 1354 KKKK 1357


>emb|CAC01821.1| transcriptional regulatory-like protein [Arabidopsis thaliana]
            gi|15242192|ref|NP_197006.1| paired amphipathic helix
            repeat-containing protein [Arabidopsis thaliana]
            gi|11358896|pir||T51447 transcription regulator-like
            protein - Arabidopsis thaliana
          Length = 1377

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 660/1450 (45%), Positives = 872/1450 (59%), Gaps = 223/1450 (15%)

Query: 2    DTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNKI 61
            DT+GVI+RVKELF+GH +LI GFNTFLPKG+EITL  +D + P+KK VEFEEAI+FVNKI
Sbjct: 87   DTSGVISRVKELFKGHNNLIFGFNTFLPKGFEITL--DDVEAPSKKTVEFEEAISFVNKI 144

Query: 62   KARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA- 120
            K RF+ ++ VYKSFL+ILNMYRK+NK I EVY+EV+ LF+ H+DLL+EFT FLPD+ A  
Sbjct: 145  KTRFQHNELVYKSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLPDSLAPH 204

Query: 121  ASSYYMSARNSVLRDRRSAMPTVRQAHVVK---RERTTVSHCDRDPSVDRPDPDHDRGLL 177
              +  + ++     DR S  P VR+  + K   RERT  S  DRD SVDR D + D+ ++
Sbjct: 205  TEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRRERTVASRGDRDHSVDRSDLNDDKSMV 264

Query: 178  RAEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPL 237
            +  ++QR+RV+K  D+RE   RD E DG + E D  Q+    S KRKS R+ E F A   
Sbjct: 265  KMHRDQRKRVDK--DNRERRSRDLE-DG-EAEQDNLQH---FSEKRKSSRRMEGFEAY-- 315

Query: 238  LDADEFFGTRPMSSTCDDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEI 297
                    + P S +  +K +LK+ Y + F FC+KVKE+L + D YQ FLKCL+++S  I
Sbjct: 316  --------SGPASHS--EKNNLKSMYNQAFLFCEKVKERLCSQDDYQAFLKCLNMFSNGI 365

Query: 298  ITQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDG-GFLAGVMNK-------------- 342
            I +++LQ+LV D+LGK+PDLM+EFN+F  + E  DG   LAGVM+K              
Sbjct: 366  IQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESIDGFQHLAGVMSKSRQQSPSFLSMSIL 425

Query: 343  --------------------KSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECR 382
                                +SL  E    + +K E++DR+  RD    +  KE++R   
Sbjct: 426  FSFFSYVIGIEITLPGTLAAESLGSEENLSRSVKGEEKDREHKRDV---EAAKEKERS-- 480

Query: 383  ERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKI 442
                              KDK+  K I ELDLS+C+RCTPSYRLLP +YPIP   ++ K 
Sbjct: 481  ------------------KDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQKS 522

Query: 443  GAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEEL 502
            GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV    K  EEL
Sbjct: 523  GAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEEL 582

Query: 503  FEKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLK 562
               I +  I  +   RI++H TALNLRCIERLYGDHGLDV +++RKN   ALPVILTRLK
Sbjct: 583  LNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLK 642

Query: 563  QKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKK 622
            QKQDEW +CR  F+ VWA++YAKN++KSLDHRSFYFKQQD+K LS KAL++EVK++ EK 
Sbjct: 643  QKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKEKS 702

Query: 623  HKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELC-TAEQLDKVMKVW 681
             KEDDV+L+I+AG RQPIIP+LE+ Y D  IHEDL++LV++SC E+C T EQ  KV+K+W
Sbjct: 703  QKEDDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLKLW 762

Query: 682  TTFLEPMLCVPSRAQGAEDTEDVVKAKNTEDVVNTENNSVKSGIVSVAESGDSKAWQLNG 741
              FLE ML V  RA+G++  EDVV+ ++     + E N     I  V+       +  NG
Sbjct: 763  ANFLELMLDVAPRAKGSDSVEDVVETQHQRAFTSGEANESSDAISLVSRQ---LKFATNG 819

Query: 742  DSGVREDRCLDSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQSSERLVNANVS 801
            D                    +   ++HG+T ++     + SG  K+N     L N +V+
Sbjct: 820  D-----------------VHASSGVSKHGETGLLN---RDSSG--KENLKDGDLANKDVA 857

Query: 802  PASGMEQSNGRTKIDNTSGHTATPSGNGNTSVEGGLELPSSEPILFQTRKFPSNYSIFSL 861
              +   Q +                GNG     G ++    E +   +  FPS     + 
Sbjct: 858  TCAEKPQKDQEI-------------GNGAAKRSGDVD----ERVATSSSSFPSGVENNNG 900

Query: 862  MLDILINFGLHLHECILQRILFVKHPSYGWLMILVVDISSRFQIRQGGDSTRPGTFTNGA 921
             +    + G         R +  K PS        +D     Q  QG D  R     NG 
Sbjct: 901  KVGSRDSSG--------SRGILSK-PSEA------IDKVDSIQHTQGVDIGRIIVLGNGL 945

Query: 922  TTGGTEVHRYQEQSIRHFKSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQK 981
             +  ++ +   ++S    K E+EEGELSP GD  EDNF VYE+  L A  K         
Sbjct: 946  QSDTSKANSNYDESGGPSKIEKEEGELSPVGD-SEDNFVVYEDRELKATAK--------- 995

Query: 982  YQSRHGEQVCCEAKGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREE 1041
              + H      EA+GEND DADDE         DD+  A E  D SG+ES  G+ECS+++
Sbjct: 996  --TEHS----VEAEGENDEDADDE-------DGDDASEAGE--DASGTESI-GDECSQDD 1039

Query: 1042 H---EDREHDN---KAESEGEAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAA-- 1093
            +   E+ EHD    KAESEGEAEGM ++H +E  G+    SER L +VKPL+K++ AA  
Sbjct: 1040 NGVEEEGEHDEIDGKAESEGEAEGM-ESHLIEDKGL-FPSSERVLLSVKPLSKHIAAAAL 1097

Query: 1094 LHEKDRNSQVFYGSDSFYVLFRLHQT------------LYERIQSAKFNSSSAEKKWKAS 1141
            + EK ++S+VFYG+D FYVLFRLH+             LYERI SAK   S +E K + +
Sbjct: 1098 VDEKKKDSRVFYGNDDFYVLFRLHRVSAIDSYDLLSHILYERILSAKTYCSGSEMKLRNT 1157

Query: 1142 HDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQA 1201
             DT S D Y RFMNAL+SLL+GS++N+KFED+CRAIIG QSY+LFTL+KLIYKLVKQLQA
Sbjct: 1158 KDTCSPDPYARFMNALFSLLNGSAENSKFEDECRAIIGNQSYVLFTLEKLIYKLVKQLQA 1217

Query: 1202 IASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQLM 1261
            + +++MDNKLLQLY YE SR+ G+                        S  P +LSIQLM
Sbjct: 1218 VVADDMDNKLLQLYEYENSRRPGR------------------------SSSPSRLSIQLM 1253

Query: 1262 DCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEF--SSQA 1319
            D   +KP+  AVS++P F++YL N+FLS    KKE   + L+RN   Y G  +   + +A
Sbjct: 1254 DNIIEKPDAYAVSMEPTFTSYLQNEFLSNSSGKKELQDIVLQRNMRGYNGLDDLAVACKA 1313

Query: 1320 MEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSNIRSSR 1379
            MEG+QV NGLECK++CSS K+SYVLDTED  +RKK +++        +     + +  +R
Sbjct: 1314 MEGVQVINGLECKMSCSSYKISYVLDTEDFFHRKKKQKK--------SNNLSLAKLSQNR 1365

Query: 1380 ALRFCKLFSS 1389
              RF K  S+
Sbjct: 1366 IARFHKFLSA 1375



 Score =  538 bits (1386), Expect = e-151
 Identities = 349/890 (39%), Positives = 478/890 (53%), Gaps = 152/890 (17%)

Query: 52  EEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFT 111
           ++A+ ++ ++K  F+     Y  FL+++  ++ +    + V   V  LF+GH +L+  F 
Sbjct: 51  DDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFN 110

Query: 112 HFLP----------DASAAASSYYMSARNSVLRDR----------RSAMPTVRQAHVVKR 151
            FLP          +A +  +  +  A + V + +          +S +  +       +
Sbjct: 111 TFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNK 170

Query: 152 ERTTV---------SHCDRDPSVDRPDPD----HDRGLLRAEKEQR-----------RRV 187
           + T V          H D      R  PD    H    L   + QR           RR+
Sbjct: 171 DITEVYNEVSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRM 230

Query: 188 EKEKDHRED------GKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLLDAD 241
             EKD R +      G RD   D  D   D    +     +++ D+   +  +  L D +
Sbjct: 231 FMEKDRRRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDNRERRSRDLEDGE 290

Query: 242 ------EFFGTRPMSS-------------TCDDKKSLKTKYPEEFAFCDKVKEKLRNPDG 282
                 + F  +  SS             +  +K +LK+ Y + F FC+KVKE+L + D 
Sbjct: 291 AEQDNLQHFSEKRKSSRRMEGFEAYSGPASHSEKNNLKSMYNQAFLFCEKVKERLCSQDD 350

Query: 283 YQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDG-GFLAGVMN 341
           YQ FLKCL+++S  II +++LQ+LV D+LGK+PDLM+EFN+F  + E  DG   LAGVM+
Sbjct: 351 YQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESIDGFQHLAGVMS 410

Query: 342 K----------------------------------KSLWIEGPGLKPMKAEDRDRDRDRD 367
           K                                  +SL  E    + +K E++DR+  RD
Sbjct: 411 KSRQQSPSFLSMSILFSFFSYVIGIEITLPGTLAAESLGSEENLSRSVKGEEKDREHKRD 470

Query: 368 RYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLL 427
               +  KE++R                     KDK+  K I ELDLS+C+RCTPSYRLL
Sbjct: 471 ---VEAAKEKERS--------------------KDKYMGKSIQELDLSDCERCTPSYRLL 507

Query: 428 PKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM 487
           P +YPIP   ++ K GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDM
Sbjct: 508 PPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDM 567

Query: 488 LLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLR 547
           LLESV    K  EEL   I +  I  +   RI++H TALNLRCIERLYGDHGLDV +++R
Sbjct: 568 LLESVGSAAKSAEELLNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIR 627

Query: 548 KNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLS 607
           KN   ALPVILTRLKQKQDEW +CR  F+ VWA++YAKN++KSLDHRSFYFKQQD+K LS
Sbjct: 628 KNPAAALPVILTRLKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLS 687

Query: 608 TKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGE 667
            KAL++EVK++ EK  KEDDV+L+I+AG RQPIIP+LE+ Y D  IHEDL++LV++SC E
Sbjct: 688 AKALVSEVKDLKEKSQKEDDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEE 747

Query: 668 LC-TAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVKAKNTEDVVNTENNSVKSGIV 726
           +C T EQ  KV+K+W  FLE ML V  RA+G++  EDVV+ ++     + E N     I 
Sbjct: 748 ICSTKEQTGKVLKLWANFLELMLDVAPRAKGSDSVEDVVETQHQRAFTSGEANESSDAIS 807

Query: 727 SV-------------AESGDSKAWQ---LNGDSGVREDRCLDSDHTVYKTETAGNNTQHG 770
            V             A SG SK  +   LN DS  +E+   D D       T     Q  
Sbjct: 808 LVSRQLKFATNGDVHASSGVSKHGETGLLNRDSSGKEN-LKDGDLANKDVATCAEKPQ-- 864

Query: 771 KTNIIGFTPDELSGVNKQNQSSERLVNANVSPASGMEQSNGRTKIDNTSG 820
           K   IG    + SG        ER+  ++ S  SG+E +NG+    ++SG
Sbjct: 865 KDQEIGNGAAKRSG-----DVDERVATSSSSFPSGVENNNGKVGSRDSSG 909


>gb|AAF03494.1| unknown protein [Arabidopsis thaliana]
          Length = 1324

 Score = 1035 bits (2675), Expect = 0.0
 Identities = 630/1369 (46%), Positives = 819/1369 (59%), Gaps = 176/1369 (12%)

Query: 2    DTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNKI 61
            DT GVIARVKELF+GH +LI GFNTFLPKGYEITL  ED+  P KK VEFE+AINFVNKI
Sbjct: 92   DTGGVIARVKELFKGHNNLIYGFNTFLPKGYEITLIEEDDALP-KKTVEFEQAINFVNKI 150

Query: 62   KARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAAA 121
            K RF+ D+HVYKSFL+ILNMYRKENK I EVY+EV++LFQGH DLL++FT FLP AS  +
Sbjct: 151  KMRFKHDEHVYKSFLEILNMYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLP-ASLPS 209

Query: 122  SSYYMSARNSVLR--DRRSAMPTVRQAHVVKRERTTVSHCDR-DPSVDRPDPDHDRGLLR 178
             S    +R+   +  DR S  P + Q  V K  R   +   R D SV+R D + D+ +++
Sbjct: 210  HSAAQHSRSQAQQYSDRGSDPPLLHQMQVEKERRRERAVALRGDYSVERYDLNDDKTMVK 269

Query: 179  AEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLL 238
             ++EQR+R++KE   R     D    G+D+ H           KRKS R+AE   A    
Sbjct: 270  IQREQRKRLDKENRARRGRDLDDREAGQDNLH-------HFPEKRKSSRRAEALEA---- 318

Query: 239  DADEFFGTRPMSSTCDDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEII 298
                + G    S++  +K +LK+ Y + F FC+KVK++L + D YQ FLKCL+I+S  II
Sbjct: 319  ----YSG----SASHSEKDNLKSMYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGII 370

Query: 299  TQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDG----GF--LAGVMNKKSLWIEGPGL 352
             +++LQ+LV DLLGK+PDLM+EFN+F  + E   G    GF  LAGVM+KK    E    
Sbjct: 371  QRKDLQNLVSDLLGKFPDLMDEFNQFFERCESITGTEIHGFQRLAGVMSKKLFSSEEQLS 430

Query: 353  KPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPINEL 412
            +PMK E+++ +   +    + +KE + +C+          KE  G         K I EL
Sbjct: 431  RPMKVEEKESEHKPEL---EAVKETE-QCK----------KEYMG---------KSIQEL 467

Query: 413  DLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYE 472
            DLS+C+ CTPSYRLLP +YPIPIAS +S++GA+VLNDHWVSVTSGSEDYSFKHMR+NQYE
Sbjct: 468  DLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYE 527

Query: 473  ESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTALNLRCIE 532
            ESLFRCEDDRFELDMLLESV+   +  E L   I    I      RI++H TALNLRCIE
Sbjct: 528  ESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIE 587

Query: 533  RLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLD 592
            RLYGDHGLDV+++L KN   ALPVILTRLKQKQ EW +CR DF KVWA +YAKN++KSLD
Sbjct: 588  RLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLD 647

Query: 593  HRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLD 652
            HRSFYFKQQD+K LS K+LLAE+KE+ EK   +DDVLL+I+AG RQPI PNLE+ Y +  
Sbjct: 648  HRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRA 707

Query: 653  IHEDLYQLVKYSCGELC-TAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVKAKNTE 711
            IHED++++V++SC ELC T EQL KV+++W  FLE +L VP RA+G +  EDVV    T 
Sbjct: 708  IHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTL 767

Query: 712  DVVNTENNSVKSGIVSVAESGDSKAWQLNGDSGVREDRCLDSDHTVYKTETAGNNTQHGK 771
            DV    +++  +G  +V+  GD+                        K ++A N  ++  
Sbjct: 768  DV---NHSTSPNGEAAVSSGGDTARLASR------------------KLKSAANGDENSS 806

Query: 772  TNIIGFTPDELSGVNKQNQSSERLVNANVSPASGMEQSNGRTKIDNTSGHTATPSGNGNT 831
            +   G     +  +NK +   E L +  ++   G+  S  + + +  +G+ A        
Sbjct: 807  S---GTFKHGIGLLNKDSTGKENLEDVEIANRDGVACSAVKPQKEQETGNEA-------- 855

Query: 832  SVEGGLELPSSEPILFQTRKFPSNYSIFSLMLDILINFGLHLHECILQRILFVKHPSYGW 891
                  E    +PI       P + S  + +  I I  G   + C++             
Sbjct: 856  ------EKRFGKPI-------PMDISERAAISSISIPSGAENNHCVV------------- 889

Query: 892  LMILVVDISSRFQIRQGGDSTRPGTFTNGATTGGTEVHRYQEQSIRHFKSEREEGELSPN 951
                             G    PG   N    G    +   E +   +K    +    P 
Sbjct: 890  -----------------GKEVLPGPSRNEKEEGELSPNGDFEDNFGVYKDHGVKSTSKPE 932

Query: 952  GDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGENDVDADDEGEESPH 1011
               E +  A  E    D        + S+   +  G  VC +       D D E E   H
Sbjct: 933  NSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQ-------DEDREEENGEH 985

Query: 1012 RSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAEGMVDAHDVEGDGM 1071
                                              E D KAESEGEAEGM D H +EG+  
Sbjct: 986  ---------------------------------DEIDGKAESEGEAEGM-DPHLLEGESE 1011

Query: 1072 SLTISERFLQTVKPLAKYVPAAL-HEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSAKFN 1130
             L  SER L +V+PL+K+V A L  E+ ++ QVFYG+D FYVLFRLHQ LYERI  AK N
Sbjct: 1012 LLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRN 1071

Query: 1131 SSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDK 1190
             S  E K K   DT + D Y RFM  LY LLDGS++NTKFED+CRAIIG QSY+LFTLDK
Sbjct: 1072 CSGGELKSKNLKDTNAGDPYARFMRVLYGLLDGSAENTKFEDECRAIIGNQSYVLFTLDK 1131

Query: 1191 LIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYS 1250
            LIY+LVKQLQAI ++EMDNKLLQLY YEKSRK G+ ID VY+EN  V++HEENIYR+E S
Sbjct: 1132 LIYRLVKQLQAIVADEMDNKLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLECS 1191

Query: 1251 PGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSR-LFLKRNKHRY 1309
              P +LSIQLMD   +KPE  AVS+DP F++Y+  + LSV   KKE+   + L+RN    
Sbjct: 1192 SLPSRLSIQLMDNIIEKPEAYAVSMDPTFASYMQTELLSVSSGKKEEGHDIVLQRN---L 1248

Query: 1310 AGSSEFSSQAMEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRKKSKRR 1358
             G  +   +AMEG++V NGLECK++CSS K++YVLDTED  +RKK K++
Sbjct: 1249 TGLYDL-CKAMEGVEVVNGLECKMSCSSYKIAYVLDTEDYFHRKKKKKK 1296


>ref|NP_177163.2| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1362

 Score =  866 bits (2237), Expect = 0.0
 Identities = 483/846 (57%), Positives = 594/846 (70%), Gaps = 64/846 (7%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPA-KKPVEFEEAINFVN 59
           +DT GVI RVKELF+G+R+LILGFNTFLPKG+EITL  ED+QP A KKPVEFEEAI+FVN
Sbjct: 48  VDTTGVILRVKELFKGNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVN 107

Query: 60  KIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASA 119
           KIK RF+GDD VYKSFLDILNMYRKENK I EVYHEVA+LF+ H DLL EFTHFLPD SA
Sbjct: 108 KIKTRFQGDDRVYKSFLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSA 167

Query: 120 AASSYYMSARNSVLRDRR-SAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLR 178
            AS+    +    +RDR   ++PT+RQ  + K++R   SH +R    +  D DH+R LL+
Sbjct: 168 TASTN--DSVKVPVRDRGIKSLPTMRQIDLDKKDRIITSHPNRALKTENMDVDHERSLLK 225

Query: 179 AEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAE--- 235
             KE+ RR++K+ D  +D  R   +D R  +HD   ++E   + +K   + +D  AE   
Sbjct: 226 DSKEEVRRIDKKNDFMDDRDR---KDYRGLDHDS--HKEHFFNSKKKLIRKDDDSAEMSD 280

Query: 236 PLLDADEFFGTRPMSSTCDDKKSL---KTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHI 292
              + D+F G  P SST D+K  +      + +E AF D+VK KL   D  QEFL+CL++
Sbjct: 281 QAREGDKFSGAIPSSSTYDEKGFIIDFLESHSQELAFVDRVKAKLDTADN-QEFLRCLNL 339

Query: 293 YSKEIITQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDGGFLAGVMNK---------- 342
           YSKEII+Q ELQSLV DL+G YPDLM+ F  FL Q +KNDG  L+G+++K          
Sbjct: 340 YSKEIISQPELQSLVSDLIGVYPDLMDAFKVFLAQCDKNDG-LLSGIVSKSKSSTFYNIL 398

Query: 343 ------KSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVS 396
                 +SLW EG   +P K+ D+D DR+R++   +  +ERDRE +ER      S K   
Sbjct: 399 LTYLFGQSLWSEGKCPQPTKSLDKDTDREREKI--ERYRERDRE-KERLEKVAASQK--- 452

Query: 397 GLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTS 456
                   + KPI+ELDLSNC++CTPSYR LPKNYPIPIAS K +IG++VLNDHWVSVTS
Sbjct: 453 --------WAKPISELDLSNCEQCTPSYRRLPKNYPIPIASQKMEIGSQVLNDHWVSVTS 504

Query: 457 GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRP 516
           GSEDYSFKHMRKNQYEESLF+CEDDRFELDMLLESV   T RVEEL  KIN+N +K D P
Sbjct: 505 GSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESVISATNRVEELLAKINSNELKTDTP 564

Query: 517 VRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFS 576
           + I++HLTALNLRCIERLY DHGLDV+++L+KNA LALPVILTRLKQKQ+EWARCR +F+
Sbjct: 565 ICIEDHLTALNLRCIERLYSDHGLDVLDLLKKNAYLALPVILTRLKQKQEEWARCRTEFN 624

Query: 577 KVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGS 636
           KVWA+IY KNYH+SLDHRSFYFKQQD+K LSTKALLAE+KEISEKK  EDD LLA+AAG+
Sbjct: 625 KVWADIYTKNYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEISEKKRGEDDALLALAAGN 684

Query: 637 RQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQ 696
           R+ I  N+ F YPD D+HEDLYQL+KYSCGE+C+ EQLDKVMKVWT FLEP+  VPSR Q
Sbjct: 685 RRTISSNMSFDYPDPDLHEDLYQLIKYSCGEMCSTEQLDKVMKVWTEFLEPIFGVPSRPQ 744

Query: 697 GAEDTEDVVKAKN-----TEDVVNTENNSVKSGIVSVAESGDSKA-WQLNGDSGVREDRC 750
           GAED ED VK+ N      ED V+ +N +      S+A S  S    ++N  + VR+   
Sbjct: 745 GAEDREDAVKSTNHDREDQEDAVSPQNGA------SIANSMRSNGPRKVNESNQVRQASE 798

Query: 751 LDSDHTVYKTETA---GNNTQHGKTNIIGFTPDELSGVNKQNQSSERLVNANVSPASG-M 806
           LD D T  KT  A    +NTQ+ K      TPDE     KQ  S ER  N+N  P  G +
Sbjct: 799 LDKDVTSSKTSDALLSCDNTQNDKMPKNLTTPDE-RAETKQAVSIERAHNSNALPLDGLL 857

Query: 807 EQSNGR 812
            Q NG+
Sbjct: 858 PQRNGK 863



 Score =  471 bits (1211), Expect = e-130
 Identities = 264/460 (57%), Positives = 322/460 (69%), Gaps = 42/460 (9%)

Query: 940  KSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGEND 999
            K EREEGELSP GD EEDN+AV+  + ++A  K K                      END
Sbjct: 932  KVEREEGELSPTGDFEEDNYAVHGENDMEALSKSK----------------------END 969

Query: 1000 VDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAE- 1058
              ADD    S  RSSD S N S N DVSG++S DGE+C RE+  D    NK ESEGEAE 
Sbjct: 970  ATADDA---SAPRSSDGSGNTSHNGDVSGTDSGDGEDCYREDDIDH---NKVESEGEAEE 1023

Query: 1059 GMVDAHD-VEGDGMSLTISERFLQTVKPLAKYVPAALHEKD-----RNSQVFYGSDSFYV 1112
            GM D HD  EGD   L+IS + L  VKPLAKYVP AL++KD     +NSQVFYG+DSFYV
Sbjct: 1024 GMSDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYV 1083

Query: 1113 LFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFED 1172
            LFRLHQ LY+RI SAK NSSS ++KWK S+ T   D Y R M+ALY+LLDG+SDN+KFED
Sbjct: 1084 LFRLHQILYDRILSAKINSSSPDRKWKTSNPTNPADSYARIMDALYNLLDGTSDNSKFED 1143

Query: 1173 DCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYH 1232
            DCRAIIGTQSY+LFTLDKLIYKL+K LQA+A++EMDNKL QLYAYEKSRK  KF+D VY+
Sbjct: 1144 DCRAIIGTQSYVLFTLDKLIYKLIKHLQAVAADEMDNKLQQLYAYEKSRKPEKFLDAVYY 1203

Query: 1233 ENACVILHEENIYRIEYSPG-PKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVV 1291
            ENA V+L +E+IYRIE     P KLSIQL+D GHDKP+VT++S+DP F+ YLHN FLS  
Sbjct: 1204 ENALVLLPDEDIYRIECEQSTPSKLSIQLLDYGHDKPDVTSISMDPTFAAYLHNVFLSYQ 1263

Query: 1292 PDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQVFNGLECKIACSSSKVSYVLDTEDVLY 1351
            P+ KE  R++LKRNK +  G  E  +   + +++ NGLECKI CSSSKVSYVLDTEDVL+
Sbjct: 1264 PNAKENPRIYLKRNKRKNGGDDELCT--TDEVKIINGLECKITCSSSKVSYVLDTEDVLH 1321

Query: 1352 RKKSKRRILHPTS---SCNEPAKSSNIRSSRALRFCKLFS 1388
            R K +R++L+ +    + +     S IR  R  R+ KL +
Sbjct: 1322 RAK-RRKLLNQSGLPLAHDSVCSGSLIRQRRTQRYQKLLT 1360


>pir||C96723 hypothetical protein F20P5.21 [imported] - Arabidopsis thaliana
           gi|2194132|gb|AAB61107.1| F20P5.21 gene product
           [Arabidopsis thaliana]
          Length = 1383

 Score =  857 bits (2215), Expect = 0.0
 Identities = 483/857 (56%), Positives = 594/857 (68%), Gaps = 75/857 (8%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPA-KKPVEFEEAINFVN 59
           +DT GVI RVKELF+G+R+LILGFNTFLPKG+EITL  ED+QP A KKPVEFEEAI+FVN
Sbjct: 48  VDTTGVILRVKELFKGNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVN 107

Query: 60  KIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASA 119
           KIK RF+GDD VYKSFLDILNMYRKENK I EVYHEVA+LF+ H DLL EFTHFLPD SA
Sbjct: 108 KIKTRFQGDDRVYKSFLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSA 167

Query: 120 AASSYYMSARNSVLRDRR-SAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLR 178
            AS+    +    +RDR   ++PT+RQ  + K++R   SH +R    +  D DH+R LL+
Sbjct: 168 TASTN--DSVKVPVRDRGIKSLPTMRQIDLDKKDRIITSHPNRALKTENMDVDHERSLLK 225

Query: 179 AEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAE--- 235
             KE+ RR++K+ D  +D  R   +D R  +HD   ++E   + +K   + +D  AE   
Sbjct: 226 DSKEEVRRIDKKNDFMDDRDR---KDYRGLDHDS--HKEHFFNSKKKLIRKDDDSAEMSD 280

Query: 236 PLLDADEFFGTRPMSSTCDDKKSL---KTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHI 292
              + D+F G  P SST D+K  +      + +E AF D+VK KL   D  QEFL+CL++
Sbjct: 281 QAREGDKFSGAIPSSSTYDEKGFIIDFLESHSQELAFVDRVKAKLDTADN-QEFLRCLNL 339

Query: 293 YSKEIITQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDGGFLAGVMNK---------- 342
           YSKEII+Q ELQSLV DL+G YPDLM+ F  FL Q +KNDG  L+G+++K          
Sbjct: 340 YSKEIISQPELQSLVSDLIGVYPDLMDAFKVFLAQCDKNDG-LLSGIVSKSKSSTFYNIL 398

Query: 343 ------KSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVS 396
                 +SLW EG   +P K+ D+D DR+R++   +  +ERDRE +ER      S K   
Sbjct: 399 LTYLFGQSLWSEGKCPQPTKSLDKDTDREREKI--ERYRERDRE-KERLEKVAASQK--- 452

Query: 397 GLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKN-----------YPIPIASYKSKIGAK 445
                   + KPI+ELDLSNC++CTPSYR LPKN           YPIPIAS K +IG++
Sbjct: 453 --------WAKPISELDLSNCEQCTPSYRRLPKNLNVHTYFVLLQYPIPIASQKMEIGSQ 504

Query: 446 VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEK 505
           VLNDHWVSVTSGSEDYSFKHMRKNQYEESLF+CEDDRFELDMLLESV   T RVEEL  K
Sbjct: 505 VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESVISATNRVEELLAK 564

Query: 506 INNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQ 565
           IN+N +K D P+ I++HLTALNLRCIERLY DHGLDV+++L+KNA LALPVILTRLKQKQ
Sbjct: 565 INSNELKTDTPICIEDHLTALNLRCIERLYSDHGLDVLDLLKKNAYLALPVILTRLKQKQ 624

Query: 566 DEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKE 625
           +EWARCR +F+KVWA+IY KNYH+SLDHRSFYFKQQD+K LSTKALLAE+KEISEKK  E
Sbjct: 625 EEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEISEKKRGE 684

Query: 626 DDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFL 685
           DD LLA+AAG+R+ I  N+ F YPD D+HEDLYQL+KYSCGE+C+ EQLDKVMKVWT FL
Sbjct: 685 DDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLIKYSCGEMCSTEQLDKVMKVWTEFL 744

Query: 686 EPMLCVPSRAQGAEDTEDVVKAKN-----TEDVVNTENNSVKSGIVSVAESGDSKA-WQL 739
           EP+  VPSR QGAED ED VK+ N      ED V+ +N +      S+A S  S    ++
Sbjct: 745 EPIFGVPSRPQGAEDREDAVKSTNHDREDQEDAVSPQNGA------SIANSMRSNGPRKV 798

Query: 740 NGDSGVREDRCLDSDHTVYKTETA---GNNTQHGKTNIIGFTPDELSGVNKQNQSSERLV 796
           N  + VR+   LD D T  KT  A    +NTQ+ K      TPDE     KQ  S ER  
Sbjct: 799 NESNQVRQASELDKDVTSSKTSDALLSCDNTQNDKMPKNLTTPDE-RAETKQAVSIERAH 857

Query: 797 NANVSPASG-MEQSNGR 812
           N+N  P  G + Q NG+
Sbjct: 858 NSNALPLDGLLPQRNGK 874



 Score =  459 bits (1182), Expect = e-127
 Identities = 258/443 (58%), Positives = 311/443 (69%), Gaps = 52/443 (11%)

Query: 940  KSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGEND 999
            K EREEGELSP GD EEDN+AV+  + ++A  K K                      END
Sbjct: 943  KVEREEGELSPTGDFEEDNYAVHGENDMEALSKSK----------------------END 980

Query: 1000 VDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAE- 1058
              ADD    S  RSSD S N S N DVSG++S DGE+C RE+  D    NK ESEGEAE 
Sbjct: 981  ATADDA---SAPRSSDGSGNTSHNGDVSGTDSGDGEDCYREDDIDH---NKVESEGEAEE 1034

Query: 1059 GMVDAHD-VEGDGMSLTISERFLQTVKPLAKYVPAALHEKD-----RNSQVFYGSDSFYV 1112
            GM D HD  EGD   L+IS + L  VKPLAKYVP AL++KD     +NSQVFYG+DSFYV
Sbjct: 1035 GMSDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYV 1094

Query: 1113 LFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFED 1172
            LFRLHQ LY+RI SAK NSSS ++KWK S+ T   D Y R M+ALY+LLDG+SDN+KFED
Sbjct: 1095 LFRLHQILYDRILSAKINSSSPDRKWKTSNPTNPADSYARIMDALYNLLDGTSDNSKFED 1154

Query: 1173 DCRAIIGTQSYLLFTLDKLIYKLVK-------------QLQAIASEEMDNKLLQLYAYEK 1219
            DCRAIIGTQSY+LFTLDKLIYKL+K             QLQA+A++EMDNKL QLYAYEK
Sbjct: 1155 DCRAIIGTQSYVLFTLDKLIYKLIKHSSHMIQLTNVILQLQAVAADEMDNKLQQLYAYEK 1214

Query: 1220 SRKLGKFIDIVYHENACVILHEENIYRIEYSPG-PKKLSIQLMDCGHDKPEVTAVSVDPK 1278
            SRK  KF+D VY+ENA V+L +E+IYRIE     P KLSIQL+D GHDKP+VT++S+DP 
Sbjct: 1215 SRKPEKFLDAVYYENALVLLPDEDIYRIECEQSTPSKLSIQLLDYGHDKPDVTSISMDPT 1274

Query: 1279 FSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQVFNGLECKIACSSS 1338
            F+ YLHN FLS  P+ KE  R++LKRNK +  G  E  +   + +++ NGLECKI CSSS
Sbjct: 1275 FAAYLHNVFLSYQPNAKENPRIYLKRNKRKNGGDDELCT--TDEVKIINGLECKITCSSS 1332

Query: 1339 KVSYVLDTEDVLYRKKSKRRILH 1361
            KVSYVLDTEDVL+R K +R++L+
Sbjct: 1333 KVSYVLDTEDVLHRAK-RRKLLN 1354


>ref|XP_493857.1| Similar to Arabidopsis chromosome I BAC genomic sequence
           (AC002396); unknown protein [Oryza sativa]
          Length = 1056

 Score =  503 bits (1296), Expect = e-140
 Identities = 274/529 (51%), Positives = 356/529 (66%), Gaps = 32/529 (6%)

Query: 255 DKKSLKTKYPEEFAFCDKVKEKLRNPDG-YQEFLKCLHIYSKEIITQQELQSLVGD--LL 311
           D +     + E   F +K+K + +  D  Y+ FL  L++Y    +  + +Q + G+  L 
Sbjct: 98  DLEKKPVDFMEAINFVNKIKARFQQEDHVYKSFLGILNMYR---LHNKSIQDVYGEVPLF 154

Query: 312 GKYPDLMEEFNEFLVQAEKNDGGFLA--GVMNKKSLWIEGPGLKPMK-----AEDRDRDR 364
             YPDL+EEF  FL              GV ++      GP +   +      E R  ++
Sbjct: 155 RDYPDLLEEFKHFLPDTSTAPEPVTVPRGVSSRHD--DRGPLMPSARNAQIIKEFRFCEK 212

Query: 365 DRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSY 424
            +++   +  +E   +C       +++  E+  L     +  KPI+ELDLSNC RCTPSY
Sbjct: 213 VKEKLEPEAYQEF-LKCLHIYSQEIITRSELKNLY----NLCKPISELDLSNCQRCTPSY 267

Query: 425 RLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 484
           RLLPKNYP+P AS ++ +GA VLND WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE
Sbjct: 268 RLLPKNYPMPPASCRTDLGASVLNDLWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 327

Query: 485 LDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVME 544
           LDMLLESV +  KRVEEL EK+ +N IK D P+RIDEHLT LNLRCIERLYGDHGLDVM+
Sbjct: 328 LDMLLESVIVAIKRVEELIEKMQDNSIKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMD 387

Query: 545 VLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTK 604
           VLRKNA +ALPVILTRLKQKQ+EW+RCR+DF+KVWAEIYAKNYHKSLDHRSFYFKQQDTK
Sbjct: 388 VLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTK 447

Query: 605 RLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYS 664
            LSTKALLA +KE++EKK KEDD+LL IA+G+R+PI+PN+ F Y D +IHEDLYQ++KYS
Sbjct: 448 NLSTKALLAAIKEVNEKKRKEDDMLLTIASGNRRPIVPNMSFEYVDPEIHEDLYQIIKYS 507

Query: 665 CGELC-TAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTEDVVKAKNTEDVVNTENNSVKS 723
           CGE+C +++Q+DKVMK+W TFLEP+L V  R  G ED +   ++          NN+  +
Sbjct: 508 CGEVCSSSDQVDKVMKIWATFLEPILGVHPRGHGVEDEKHNSRSTKAGPANVEINNASTN 567

Query: 724 GIVSV-----------AESGDSKAWQLNGDSGVREDRCLDSDHTVYKTE 761
           G V+V            ++  S+A  + G +   ++   D++ TV + E
Sbjct: 568 GTVTVKHAHSDEIVPKEQASCSRAILVGGVAADAQNSLQDAERTVCRDE 616



 Score =  426 bits (1096), Expect = e-117
 Identities = 241/404 (59%), Positives = 289/404 (70%), Gaps = 18/404 (4%)

Query: 909  GDSTRPGTFTNGATTGGTEVHRYQEQSIRHFKSEREEGELSPNGDMEEDNFAVYENSGLD 968
            G+   PG+F N        ++ Y   S  H K EREEGELSPNGD+ E NF  ++   +D
Sbjct: 637  GEIRIPGSF-NSKDNKHCPINEYCG-SHNHSKVEREEGELSPNGDVGE-NFGPFDGVSVD 693

Query: 969  AGHKGKGGDMSQKYQSRHGEQVCCEAKGENDVDADDEGEESPHRSSDDSENASE-NVDVS 1027
               K K     +  Q R  +    E  GENDVDADDEGEES  +  +DSENASE   D S
Sbjct: 694  GVSKAKEDSTRRLLQGRPMDAT--EFAGENDVDADDEGEESA-QMMEDSENASEAGEDAS 750

Query: 1028 GSESADGEECSREEHEDREH------DNKAESEGEAEGMVDAHDVEGDGMSLTISERFLQ 1081
            GSES DGEECSRE+HED +       D KAESEGEA    +A D +  G+SL  SER   
Sbjct: 751  GSESGDGEECSREDHEDEDDMDQDDPDAKAESEGEAAENTEAQDADA-GISLPFSERSHN 809

Query: 1082 TVKPLAKYVPAALHE-KDRNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKA 1140
             VKPLAK+VP AL++ +++ S +FYG+DSFYVLFRLHQ LYERI SAK NSSSAEKKWKA
Sbjct: 810  AVKPLAKHVPRALNDHEEKFSCIFYGNDSFYVLFRLHQILYERILSAKTNSSSAEKKWKA 869

Query: 1141 SHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQ 1200
            S DT   DQY +FM+ALY+LLDGSSDNTKFEDDCR+IIGTQSY+LFTLDKLIYK+   LQ
Sbjct: 870  SKDTNLPDQYSKFMSALYNLLDGSSDNTKFEDDCRSIIGTQSYVLFTLDKLIYKV---LQ 926

Query: 1201 AIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQL 1260
            AIAS+EMDNKLLQLY YEKSR  G+F D+VYHENA V+LH+E+IYR E    P +LSIQL
Sbjct: 927  AIASDEMDNKLLQLYIYEKSRSPGRFFDLVYHENARVLLHDESIYRFERRSNPTRLSIQL 986

Query: 1261 MDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKR 1304
            M+ GH+KPEVTAVS+DP FS+YL+N++LS + + K    +FL R
Sbjct: 987  MEYGHEKPEVTAVSIDPNFSSYLYNEYLSSISNTKLYDDIFLGR 1030



 Score =  160 bits (404), Expect = 4e-37
 Identities = 91/157 (57%), Positives = 106/157 (66%), Gaps = 13/157 (8%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           IDTAGVI RVK LF GH +LILGFN FLPKG+ I L     Q   KKPV+F EAINFVNK
Sbjct: 61  IDTAGVIIRVKTLFNGHHELILGFNAFLPKGFAIKL-----QDLEKKPVDFMEAINFVNK 115

Query: 61  IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
           IKARF+ +DHVYKSFL ILNMYR  NK I +VY EV  LF+ + DLL+EF HFLPD S A
Sbjct: 116 IKARFQQEDHVYKSFLGILNMYRLHNKSIQDVYGEVP-LFRDYPDLLEEFKHFLPDTSTA 174

Query: 121 ASSYY----MSARNSVLRDRRSAMPTVRQAHVVKRER 153
                    +S+R+    DR   MP+ R A ++K  R
Sbjct: 175 PEPVTVPRGVSSRHD---DRGPLMPSARNAQIIKEFR 208



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 6/65 (9%)

Query: 247 RPMSSTCDDKKSL-----KTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQ 301
           R +SS  DD+  L       +  +EF FC+KVKEKL  P+ YQEFLKCLHIYS+EIIT+ 
Sbjct: 182 RGVSSRHDDRGPLMPSARNAQIIKEFRFCEKVKEKLE-PEAYQEFLKCLHIYSQEIITRS 240

Query: 302 ELQSL 306
           EL++L
Sbjct: 241 ELKNL 245



 Score = 36.2 bits (82), Expect = 8.0
 Identities = 19/81 (23%), Positives = 37/81 (45%)

Query: 39  EDEQPPAKKPVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAV 98
           + + P   + +   +A+ ++  +K +F+     Y  FL+++  ++        V   V  
Sbjct: 13  QGQGPSQNQKLTTNDALLYLKAVKDKFQDKRDKYDEFLEVMRDFKSGRIDTAGVIIRVKT 72

Query: 99  LFQGHADLLDEFTHFLPDASA 119
           LF GH +L+  F  FLP   A
Sbjct: 73  LFNGHHELILGFNAFLPKGFA 93


>ref|NP_176197.2| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1159

 Score =  452 bits (1162), Expect = e-125
 Identities = 246/497 (49%), Positives = 318/497 (63%), Gaps = 45/497 (9%)

Query: 254 DDKKSLKTKYPEEFAFCDKVKEKLRNPD-GYQEFLKCLHIYSKEIITQQELQSLVGDLLG 312
           D+K      +     F +++K +    D  Y++FL  L++Y KE  +  E+   V  L  
Sbjct: 118 DEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQ 177

Query: 313 KYPDLMEEFNEFLVQ----AEKNDGGFLAGVM--NKKSLWIEGPGLKPMKAEDRDRDRDR 366
            + DL+ EF  FL         ND  F    +  ++ S +   PG+ P   E + +    
Sbjct: 178 DHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTF---PGMHPKHFEKKIKRSRH 234

Query: 367 DRYRD--DGMKERDRECRERDRSTVVSNKEVSGL-KIKD--------------------- 402
           D Y +  D  ++ D         ++ +  +  G  K++D                     
Sbjct: 235 DEYTELSDQREDGDENLVAYSAESLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGS 294

Query: 403 -------KHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVT 455
                   H  K INELDL++C +CTPSYR LP +YPI I SY++ +G KVLNDHWVSVT
Sbjct: 295 QKNLLSTNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVT 354

Query: 456 SGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDR 515
           SGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+   KRVE L EKINNN I  + 
Sbjct: 355 SGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIET 414

Query: 516 PVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADF 575
           P+ I EHL+    +CIERLYGD+GLDVM+ L+KN+ +ALPVILTRLKQKQ+EWARCRADF
Sbjct: 415 PICIREHLSG---KCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADF 471

Query: 576 SKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAG 635
            KVWAE+YAKN+HKSLDHRSFYFKQQD+K LSTK L+AE+K+ISE+KHKE D+L AIA G
Sbjct: 472 RKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE-DLLRAIAVG 530

Query: 636 SRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRA 695
           ++    P++EF Y D  +H DLY+L+KY C E+C  EQ DKVMK+W TFLEPM  VPSR+
Sbjct: 531 TKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFLEPMFGVPSRS 590

Query: 696 QGAEDTEDVVKAKNTED 712
           +  E  +DV K ++ ++
Sbjct: 591 ETIETMKDVAKIEDNQE 607



 Score =  415 bits (1067), Expect = e-114
 Identities = 244/465 (52%), Positives = 310/465 (66%), Gaps = 27/465 (5%)

Query: 930  RYQEQSIRHFKSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQ 989
            R  + S+   K EREEGELSP    E++NF VY+ +GL+   K    ++S     R  ++
Sbjct: 699  RVSDVSMGGHKVEREEGELSPTESCEQENFEVYKENGLEPVQKLPDNEISNT--DREPKE 756

Query: 990  VCC--EAKGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREH 1047
              C  EA   ++   +D+  +   + S+  ENAS+ + VS S+   G+  S EEH+    
Sbjct: 757  GACGTEAVTRSNALPEDDDNKITQKLSEGDENASKFI-VSASKFG-GQVSSDEEHKG--- 811

Query: 1048 DNKAESEGEAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAALHEKD----RNSQV 1103
               AESE EA GMV++++ E DG   T SER+LQ VKPLAK+VP  L   +     +S+V
Sbjct: 812  ---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRV 867

Query: 1104 FYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDG 1163
            FYG+DS YVLFRLHQ LYERIQSAK +S   E+KWKA  D+ STD Y RFM ALY+LLDG
Sbjct: 868  FYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWKAP-DSTSTDSYTRFMEALYNLLDG 923

Query: 1164 SSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKL 1223
            SSDNTKFED+CRAIIG QSY+LFTLDKL+ K VK L A+A++E D KLLQLYAYE  RK 
Sbjct: 924  SSDNTKFEDECRAIIGAQSYVLFTLDKLVQKFVKHLHAVAADETDTKLLQLYAYENYRKP 983

Query: 1224 GKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYL 1283
            G+F DIVYHENA  +LH++NIYRIEYS    +L IQLM+  +D+PEVTAV+V+P F+ YL
Sbjct: 984  GRFFDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQPEVTAVTVEPGFANYL 1043

Query: 1284 HNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFS---SQAMEGLQVFNGLECKIACSSSKV 1340
             NDFLS V D +EK  LFLKRNK + +G  E S   S+A+EGL + N +ECKIACSS KV
Sbjct: 1044 QNDFLSFVSD-EEKPGLFLKRNKAKLSGPGEESLGMSRALEGLNIINEVECKIACSSFKV 1102

Query: 1341 SYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSN--IRSSRALRF 1383
             Y   T D+LYR+K K+  L+PT   N     S+   R  R  RF
Sbjct: 1103 KYEPHTADLLYRRKQKKATLNPTGPENVKTSDSSELSRKKRISRF 1147



 Score =  187 bits (474), Expect = 3e-45
 Identities = 109/214 (50%), Positives = 136/214 (62%), Gaps = 6/214 (2%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           +DT GVIARVK+LF+G+ DL+LGFNTFLPKGY+ITL  EDE+P  KKPV+F+ AI FVN+
Sbjct: 79  VDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKP--KKPVDFQVAIEFVNR 136

Query: 61  IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
           IKARF GDD  YK FLDILNMYRKE K INEVY EV +LFQ H DLL EF HFLPD   +
Sbjct: 137 IKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLPDFRGS 196

Query: 121 AS-SYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRA 179
            S +  +  RN++ RDR S  P +   H  K+ + +      + S  R D D +     A
Sbjct: 197 VSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQREDGDENLVAYSA 256

Query: 180 EK--EQRRRVEKEKDHREDGKRDWERDGRDHEHD 211
           E    Q +     K    +G + +E +G  HE D
Sbjct: 257 ESLANQGQWPGYPKVEDTEGIQIYESNG-GHERD 289



 Score = 40.0 bits (92), Expect = 0.56
 Identities = 19/63 (30%), Positives = 35/63 (55%)

Query: 53  EAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTH 112
           +A+ ++  +K  F+ +   Y++FL ++  ++ +    N V   V  LF+G+ DLL  F  
Sbjct: 45  DALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNT 104

Query: 113 FLP 115
           FLP
Sbjct: 105 FLP 107


>dbj|BAC43533.1| putative transcriptional regulatory protein [Arabidopsis thaliana]
          Length = 543

 Score =  451 bits (1160), Expect = e-125
 Identities = 256/487 (52%), Positives = 332/487 (67%), Gaps = 49/487 (10%)

Query: 2   DTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNKI 61
           DT+GVI+RVKELF+GH +LI GFNTFLPKG+EITL  +D + P+KK VEFEEAI+FVNKI
Sbjct: 87  DTSGVISRVKELFKGHNNLIFGFNTFLPKGFEITL--DDVEAPSKKTVEFEEAISFVNKI 144

Query: 62  KARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA- 120
           K RF+ ++ VYKSFL+ILNMYRK+NK I EVY+EV+ LF+ H+DLL+EFT FLPD+ A  
Sbjct: 145 KTRFQHNELVYKSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLPDSLAPH 204

Query: 121 ASSYYMSARNSVLRDRRSAMPTVRQAHVVK---RERTTVSHCDRDPSVDRPDPDHDRGLL 177
             +  + ++     DR S  P VR+  + K   RERT  S  DRD SVDR D + D+ ++
Sbjct: 205 TEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRRERTVASRGDRDHSVDRSDLNDDKSMV 264

Query: 178 RAEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPL 237
           +  ++QR+RV+K  D+RE   RD E DG + E D  Q+    S KRKS R+ E F A   
Sbjct: 265 KMHRDQRKRVDK--DNRERRSRDLE-DG-EAEQDNLQH---FSEKRKSSRRMEGFEAY-- 315

Query: 238 LDADEFFGTRPMSSTCDDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEI 297
                   + P S +  +K +LK+ Y + F FC+KVKE+L + D YQ FLKCL+++S  I
Sbjct: 316 --------SGPASHS--EKNNLKSMYNQAFLFCEKVKERLCSQDDYQAFLKCLNMFSNGI 365

Query: 298 ITQQELQSLVGDLLGKYPDLMEEFNEFLVQAEKNDG-GFLAGVMNKKSLWIEGPGLKPMK 356
           I +++LQ+LV D+LGK+PDLM+EFN+F  + E  DG   LAGVM+KKSL  E    + +K
Sbjct: 366 IQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESIDGFQHLAGVMSKKSLGSEENLSRSVK 425

Query: 357 AEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSN 416
            E++DR+  RD    +  KE++R                     KDK+  K I ELDLS+
Sbjct: 426 GEEKDREHKRDV---EAAKEKERS--------------------KDKYMGKSIQELDLSD 462

Query: 417 CDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF 476
           C+RCTPSYRLLP +YPIP   ++ K GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLF
Sbjct: 463 CERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLF 522

Query: 477 RCEDDRF 483
           RCEDDRF
Sbjct: 523 RCEDDRF 529


>ref|NP_172515.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1173

 Score =  442 bits (1136), Expect = e-122
 Identities = 241/490 (49%), Positives = 313/490 (63%), Gaps = 31/490 (6%)

Query: 254 DDKKSLKTKYPEEFAFCDKVKEKLRNPD-GYQEFLKCLHIYSKEIITQQELQSLVGDLLG 312
           ++K  ++  + +   F  K+K +  + +  Y+ FL  L++Y KE  +  E+   V  L  
Sbjct: 157 EEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFK 216

Query: 313 KYPDLMEEFNEFLVQAEKNDGGFLAGVMNKK-----SLWIEGPGLKPMKAEDRDRDRDRD 367
            + DL+ EF  FL    ++       V   K     ++  +    +  K ED     D+ 
Sbjct: 217 GHEDLLMEFVNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSDQR 276

Query: 368 RYRDDGMKE---------------RDRECRE---------RDRSTVVSNKEVSGLKIKDK 403
              D+ +                 RD E RE          ++S    ++++   K   K
Sbjct: 277 EDGDENLVTCSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGNHKSTTK 336

Query: 404 HFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSF 463
           +   PINELDLS C +CTPSYRLLPK+Y + I SY++ +G K LNDH VSVTSGSEDYSF
Sbjct: 337 YVGTPINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSF 396

Query: 464 KHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHL 523
            HMRKNQYEESLFRCEDDR+E+DMLL SV+   K+VE L EK+NNN I  D  + I++HL
Sbjct: 397 SHMRKNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHL 456

Query: 524 TALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIY 583
           +A+NLRCIERLYGD+GLDVM++L+KN   ALPVILTRLKQKQ+EWARC +DF KVWAE+Y
Sbjct: 457 SAMNLRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVY 516

Query: 584 AKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPN 643
           AKN+HKSLDHRSFYFKQQD+K LSTK L+AEVK+ISEKKH+E D+L AIA        P+
Sbjct: 517 AKNHHKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQE-DLLQAIAVRVMPLFTPD 575

Query: 644 LEFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTED 703
           LEF+Y D  IHEDLY L+KY C E+C  EQ DKVMK+W TFLEP+  + SR+Q     ED
Sbjct: 576 LEFNYCDTQIHEDLYLLIKYYCEEICATEQSDKVMKLWITFLEPIFGILSRSQDNLALED 635

Query: 704 VVKAKNTEDV 713
           V K KN  ++
Sbjct: 636 VSKLKNNREL 645



 Score =  360 bits (923), Expect = 2e-97
 Identities = 211/453 (46%), Positives = 282/453 (61%), Gaps = 30/453 (6%)

Query: 940  KSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGEND 999
            K E EEGELSP    E+ NF V   +      K     ++   +S   +Q C +   +N 
Sbjct: 740  KHELEEGELSPTASREQSNFEVNGQNAFKPLQK-----VTDNVRSNKDKQSCDKKGAKNK 794

Query: 1000 VDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAEG 1059
              A+D+ +E+ H+ S++++ ASE + VSG++ +    C    HE+          G   G
Sbjct: 795  TRAEDDKQENCHKLSENNKTASEML-VSGTKVS----C----HEENNRVMNCNGRGSVAG 845

Query: 1060 MVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAALHEKD----RNSQVFYGSDSFYVLFR 1115
             + A+  +G+  S   SERFLQTVKP+AK++   L   +     +SQVFYG+DS+YVLFR
Sbjct: 846  EM-ANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYYVLFR 904

Query: 1116 LHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCR 1175
            LHQ LYERIQ+AK +S   EKKWKA+ +T + D Y RFM+ALY+LLDGS DNTKFED+CR
Sbjct: 905  LHQMLYERIQTAKKHS---EKKWKAADNT-TPDSYPRFMDALYNLLDGSIDNTKFEDECR 960

Query: 1176 AIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENA 1235
            AI G QSY+LFTLDKL+ K VK L ++AS+E D KLLQL+AYE  RK GKF D+VYHENA
Sbjct: 961  AIFGAQSYVLFTLDKLVQKFVKHLHSVASDETDTKLLQLHAYENYRKPGKFFDLVYHENA 1020

Query: 1236 CVILHEENIYRIEYSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKK 1295
            C +LHE NIYRI YS    +LSIQLM+ G+++ EV  V+++P F+ YL N  L  V D +
Sbjct: 1021 CALLHEANIYRIRYSSEGTRLSIQLMNSGNNQLEVMGVAMEPAFADYLQNKCLKSVND-E 1079

Query: 1296 EKSRLFLKRNKHRYAGSSEFSSQ--AMEGLQVFNGLECKIACSSSKVSYVLDTEDVLYRK 1353
            E   LFL RNK ++    E      AME L + N +EC++ACSSSKV YV +T D+LYR 
Sbjct: 1080 ENHGLFLNRNKKKFTSLDESRGMPVAMERLNIINEMECRMACSSSKVKYVANTSDLLYRS 1139

Query: 1354 KSKRRILHPTSSCNEPAKSSNIRSSRALRFCKL 1386
            K  +    P S  +E  K   I     +  C+L
Sbjct: 1140 KQGK----PNSRVSEILKQRRISRFHIMLNCRL 1168



 Score =  158 bits (399), Expect = 1e-36
 Identities = 97/233 (41%), Positives = 132/233 (56%), Gaps = 41/233 (17%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           IDT GVI R+K LF+G+RDL+LGFNTFLPKGY+ITL  E+E+P  +  V+F++AI FV K
Sbjct: 118 IDTNGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEEEKPKIR--VDFKDAIGFVTK 175

Query: 61  IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
           IK RF  D+H YK FLDILN+YRKE K I+EVY EV +LF+GH DLL EF +FLP+   +
Sbjct: 176 IKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVNFLPNCPES 235

Query: 121 ASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRAE 180
           A     S +N+V R + +A              TT  H D+                  +
Sbjct: 236 AP----STKNAVPRHKGTA--------------TTAMHSDK------------------K 259

Query: 181 KEQRRRVEK---EKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAE 230
           ++QR ++E      D REDG  +      D     GQ      ++ + D + +
Sbjct: 260 RKQRCKLEDYSGHSDQREDGDENLVTCSADSPVGEGQPGYFRDYENREDTETD 312



 Score = 43.9 bits (102), Expect = 0.038
 Identities = 20/63 (31%), Positives = 36/63 (56%)

Query: 53  EAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTH 112
           +A+ ++  +K  F  +   Y+SFL+++  ++ +    N V   + VLF+G+ DLL  F  
Sbjct: 84  DALTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNT 143

Query: 113 FLP 115
           FLP
Sbjct: 144 FLP 146


>gb|AAD39565.1| T10O24.5 [Arabidopsis thaliana] gi|25402600|pir||C86238 protein
           T10O24.5 [imported] - Arabidopsis thaliana
          Length = 1164

 Score =  434 bits (1117), Expect = e-120
 Identities = 244/510 (47%), Positives = 316/510 (61%), Gaps = 51/510 (10%)

Query: 254 DDKKSLKTKYPEEFAFCDKVKEKLRNPD-GYQEFLKCLHIYSKEIITQQELQSLVGDLLG 312
           ++K  ++  + +   F  K+K +  + +  Y+ FL  L++Y KE  +  E+   V  L  
Sbjct: 157 EEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFK 216

Query: 313 KYPDLMEEFNEFLVQAEKNDGGFLAGVMNKK-----SLWIEGPGLKPMKAED----RDRD 363
            + DL+ EF  FL    ++       V   K     ++  +    +  K ED     D+ 
Sbjct: 217 GHEDLLMEFVNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSDQR 276

Query: 364 RDRDR-------------------------YRDDGMKE------RDRECRE--------- 383
            D D                          + D  + E      RD E RE         
Sbjct: 277 EDGDENLVTCSAGNSLEFSGLYPVLRSMLIFADSPVGEGQPGYFRDYENREDTETDTADR 336

Query: 384 RDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIG 443
            ++S    ++++   K   K+   PINELDLS C +CTPSYRLLPK+Y + I SY++ +G
Sbjct: 337 TEKSAASGSQDIGNHKSTTKYVGTPINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLG 396

Query: 444 AKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELF 503
            K LNDH VSVTSGSEDYSF HMRKNQYEESLFRCEDDR+E+DMLL SV+   K+VE L 
Sbjct: 397 KKTLNDHLVSVTSGSEDYSFSHMRKNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILL 456

Query: 504 EKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQ 563
           EK+NNN I  D  + I++HL+A+NLRCIERLYGD+GLDVM++L+KN   ALPVILTRLKQ
Sbjct: 457 EKMNNNTISVDSTICIEKHLSAMNLRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQ 516

Query: 564 KQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKH 623
           KQ+EWARC +DF KVWAE+YAKN+HKSLDHRSFYFKQQD+K LSTK L+AEVK+ISEKKH
Sbjct: 517 KQEEWARCHSDFQKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKH 576

Query: 624 KEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTT 683
           +E D+L AIA        P+LEF+Y D  IHEDLY L+KY C E+C  EQ DKVMK+W T
Sbjct: 577 QE-DLLQAIAVRVMPLFTPDLEFNYCDTQIHEDLYLLIKYYCEEICATEQSDKVMKLWIT 635

Query: 684 FLEPMLCVPSRAQGAEDTEDVVKAKNTEDV 713
           FLEP+  + SR+Q     EDV K KN  ++
Sbjct: 636 FLEPIFGILSRSQDNLALEDVSKLKNNREL 665



 Score =  338 bits (867), Expect = 8e-91
 Identities = 196/411 (47%), Positives = 264/411 (63%), Gaps = 27/411 (6%)

Query: 940  KSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQVCCEAKGEND 999
            K E EEGELSP    E+ NF V   +      K     ++   +S   +Q C +   +N 
Sbjct: 760  KHELEEGELSPTASREQSNFEVNGQNAFKPLQK-----VTDNVRSNKDKQSCDKKGAKNK 814

Query: 1000 VDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEGEAEG 1059
              A+D+ +E+ H+ S++++ ASE + VSG++ +    C    HE+          G   G
Sbjct: 815  TRAEDDKQENCHKLSENNKTASEML-VSGTKVS----C----HEENNRVMNCNGRGSVAG 865

Query: 1060 MVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAALHEKD----RNSQVFYGSDSFYVLFR 1115
             + A+  +G+  S   SERFLQTVKP+AK++   L   +     +SQVFYG+DS+YVLFR
Sbjct: 866  EM-ANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYYVLFR 924

Query: 1116 LHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCR 1175
            LHQ LYERIQ+AK +S   EKKWKA+ +T + D Y RFM+ALY+LLDGS DNTKFED+CR
Sbjct: 925  LHQMLYERIQTAKKHS---EKKWKAADNT-TPDSYPRFMDALYNLLDGSIDNTKFEDECR 980

Query: 1176 AIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENA 1235
            AI G QSY+LFTLDKL+ K VK L ++AS+E D KLLQL+AYE  RK GKF D+VYHENA
Sbjct: 981  AIFGAQSYVLFTLDKLVQKFVKHLHSVASDETDTKLLQLHAYENYRKPGKFFDLVYHENA 1040

Query: 1236 CVILHEENIYRIEYSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYLHNDFLSVVPDKK 1295
            C +LHE NIYRI Y  G  +LSIQLM+ G+++ EV  V+++P F+ YL N  L  V D +
Sbjct: 1041 CALLHEANIYRIRYVEG-TRLSIQLMNSGNNQLEVMGVAMEPAFADYLQNKCLKSVND-E 1098

Query: 1296 EKSRLFLKRNKHRYAGSSEFSSQ--AMEGLQVFNGLECKIACSSSKVSYVL 1344
            E   LFL RNK ++    E      AME L + N +EC++ACSSSKV +++
Sbjct: 1099 ENHGLFLNRNKKKFTSLDESRGMPVAMERLNIINEMECRMACSSSKVQHIM 1149



 Score =  157 bits (398), Expect = 2e-36
 Identities = 93/200 (46%), Positives = 122/200 (60%), Gaps = 41/200 (20%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           IDT GVI R+K LF+G+RDL+LGFNTFLPKGY+ITL  E+E+P  +  V+F++AI FV K
Sbjct: 118 IDTNGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEEEKPKIR--VDFKDAIGFVTK 175

Query: 61  IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
           IK RF  D+H YK FLDILN+YRKE K I+EVY EV +LF+GH DLL EF +FLP+   +
Sbjct: 176 IKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVNFLPNCPES 235

Query: 121 ASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHDRGLLRAE 180
           A     S +N+V R + +A              TT  H D+                  +
Sbjct: 236 AP----STKNAVPRHKGTA--------------TTAMHSDK------------------K 259

Query: 181 KEQRRRVEK---EKDHREDG 197
           ++QR ++E      D REDG
Sbjct: 260 RKQRCKLEDYSGHSDQREDG 279



 Score = 43.9 bits (102), Expect = 0.038
 Identities = 20/63 (31%), Positives = 36/63 (56%)

Query: 53  EAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTH 112
           +A+ ++  +K  F  +   Y+SFL+++  ++ +    N V   + VLF+G+ DLL  F  
Sbjct: 84  DALTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNT 143

Query: 113 FLP 115
           FLP
Sbjct: 144 FLP 146


>gb|AAD39330.1| Hypothetical protein [Arabidopsis thaliana] gi|25404243|pir||A96623
            hypothetical protein F23H11.20 [imported] - Arabidopsis
            thaliana
          Length = 1108

 Score =  397 bits (1019), Expect = e-108
 Identities = 237/465 (50%), Positives = 304/465 (64%), Gaps = 39/465 (8%)

Query: 930  RYQEQSIRHFKSEREEGELSPNGDMEEDNFAVYENSGLDAGHKGKGGDMSQKYQSRHGEQ 989
            R  + S+   K EREEGELSP    E++NF VY+ +GL+   K    ++S     R  ++
Sbjct: 660  RVSDVSMGGHKVEREEGELSPTESCEQENFEVYKENGLEPVQKLPDNEISNT--DREPKE 717

Query: 990  VCC--EAKGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREH 1047
              C  EA   ++   +D+  +   + S+  ENAS+ + VS S+   G+  S EEH+    
Sbjct: 718  GACGTEAVTRSNALPEDDDNKITQKLSEGDENASKFI-VSASKFG-GQVSSDEEHKG--- 772

Query: 1048 DNKAESEGEAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAALHEKD----RNSQV 1103
               AESE EA GMV++++ E DG   T SER+LQ VKPLAK+VP  L   +     +S+V
Sbjct: 773  ---AESENEAGGMVNSNEGE-DGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRV 828

Query: 1104 FYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYSLLDG 1163
            FYG+DS YVLFRLHQ LYERIQSAK +S   E+KWKA  D+ STD Y RFM ALY+LLDG
Sbjct: 829  FYGNDSLYVLFRLHQMLYERIQSAKIHS---ERKWKAP-DSTSTDSYTRFMEALYNLLDG 884

Query: 1164 SSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEMDNKLLQLYAYEKSRKL 1223
            SSDNTKFED+CRAIIG QSY+LFTLDKL+ K VK L A+A++E D KLLQLYAYE  RK 
Sbjct: 885  SSDNTKFEDECRAIIGAQSYVLFTLDKLVQKFVKHLHAVAADETDTKLLQLYAYENYRKP 944

Query: 1224 GKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYL 1283
            G+F DIVYHENA  +LH++NIYRIEYS    +L IQLM+  +D+PEVTAV+V+P F+ YL
Sbjct: 945  GRFFDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQPEVTAVTVEPGFANYL 1004

Query: 1284 HNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFS---SQAMEGLQVFNGLECKIACSSSKV 1340
             NDFLS V D +EK  LFLKRNK + +G  E S   S+A+EGL + N +ECKIAC     
Sbjct: 1005 QNDFLSFVSD-EEKPGLFLKRNKAKLSGPGEESLGMSRALEGLNIINEVECKIAC----- 1058

Query: 1341 SYVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSN--IRSSRALRF 1383
                   ++LYR+K K+  L+PT   N     S+   R  R  RF
Sbjct: 1059 -------NLLYRRKQKKATLNPTGPENVKTSDSSELSRKKRISRF 1096



 Score =  383 bits (984), Expect = e-104
 Identities = 220/502 (43%), Positives = 287/502 (56%), Gaps = 94/502 (18%)

Query: 254 DDKKSLKTKYPEEFAFCDKVKEKLRNPD-GYQEFLKCLHIYSKEIITQQELQSLVGDLLG 312
           D+K      +     F +++K +    D  Y++FL  L++Y KE  +  E+   V  L  
Sbjct: 118 DEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQ 177

Query: 313 KYPDLMEEFNEFLVQ----AEKNDGGFLAGVM--NKKSLWIEGPGLKPMKAEDRDRDRDR 366
            + DL+ EF  FL         ND  F    +  ++ S +   PG+ P   E + +    
Sbjct: 178 DHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTF---PGMHPKHFEKKIKRSRH 234

Query: 367 DRY------RDDGMKERDRECRERDRSTVVSNK----------EVSGLKIKDK------- 403
           D Y      R+DG +              ++N+          +  G++I +        
Sbjct: 235 DEYTELSDQREDGDENLVAYSAGNSLGKSLANQGQWPGYPKVEDTEGIQIYESNGGHERD 294

Query: 404 -------------HFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDH 450
                        H  K INELDL++C +CTPSYR LP +YPI I SY++ +G KVLNDH
Sbjct: 295 PDIGSQKNLLSTNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDH 354

Query: 451 WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNV 510
           WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR                            
Sbjct: 355 WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR---------------------------- 386

Query: 511 IKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWAR 570
                              CIERLYGD+GLDVM+ L+KN+ +ALPVILTRLKQKQ+EWAR
Sbjct: 387 -------------------CIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWAR 427

Query: 571 CRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLL 630
           CRADF KVWAE+YAKN+HKSLDHRSFYFKQQD+K LSTK L+AE+K+ISE+KHKE D+L 
Sbjct: 428 CRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE-DLLR 486

Query: 631 AIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLC 690
           AIA G++    P++EF Y D  +H DLY+L+KY C E+C  EQ DKVMK+W TFLEPM  
Sbjct: 487 AIAVGTKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFLEPMFG 546

Query: 691 VPSRAQGAEDTEDVVKAKNTED 712
           VPSR++  E  +DV K ++ ++
Sbjct: 547 VPSRSETIETMKDVAKIEDNQE 568



 Score =  186 bits (471), Expect = 6e-45
 Identities = 99/174 (56%), Positives = 121/174 (68%), Gaps = 3/174 (1%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           +DT GVIARVK+LF+G+ DL+LGFNTFLPKGY+ITL  EDE+P  KKPV+F+ AI FVN+
Sbjct: 79  VDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKP--KKPVDFQVAIEFVNR 136

Query: 61  IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAA 120
           IKARF GDD  YK FLDILNMYRKE K INEVY EV +LFQ H DLL EF HFLPD   +
Sbjct: 137 IKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLPDFRGS 196

Query: 121 AS-SYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVDRPDPDHD 173
            S +  +  RN++ RDR S  P +   H  K+ + +      + S  R D D +
Sbjct: 197 VSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQREDGDEN 250



 Score = 40.0 bits (92), Expect = 0.56
 Identities = 19/63 (30%), Positives = 35/63 (55%)

Query: 53  EAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTH 112
           +A+ ++  +K  F+ +   Y++FL ++  ++ +    N V   V  LF+G+ DLL  F  
Sbjct: 45  DALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNT 104

Query: 113 FLP 115
           FLP
Sbjct: 105 FLP 107


>ref|XP_640783.1| hypothetical protein DDB0216409 [Dictyostelium discoideum]
            gi|60468819|gb|EAL66819.1| paired amphipathic helix (PAH)
            containing protein [Dictyostelium discoideum]
          Length = 1934

 Score =  213 bits (543), Expect = 3e-53
 Identities = 121/319 (37%), Positives = 191/319 (58%), Gaps = 18/319 (5%)

Query: 410  NELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKN 469
            +E+D + C R  PSYR LPKNYP P  + +S++   VLND WVS  +GSED+ FK  RKN
Sbjct: 1179 SEIDFTTCKRLGPSYRALPKNYPQPRCTGRSELAESVLNDVWVSFPTGSEDFGFKSQRKN 1238

Query: 470  QYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRID---EHLTAL 526
            Q+EE+LF+CED+RFELD+++E +N +T RV    + I N++I      R++    +L  L
Sbjct: 1239 QFEENLFKCEDERFELDLIIE-LNASTIRV---LDPILNSLIDMHDHERLNFRMPNLDVL 1294

Query: 527  NLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKN 586
            + R IERLY + G++++  L  N  ++LPVIL RLKQK  EW + + +++KVW +   KN
Sbjct: 1295 HHRSIERLYNNKGMEIITALYNNPLVSLPVILKRLKQKDQEWRKAKREWNKVWKDTTEKN 1354

Query: 587  YHKSLDHRSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEF 646
            Y++SLD++S  FKQ D K L+ K LLAE+++   +K +E D LL   +  +Q II    +
Sbjct: 1355 YYRSLDYQSTSFKQSDKKTLTPKVLLAEIRQKYSEKIRERDDLLQRRSRIKQTIIKPPPY 1414

Query: 647  H----YPDLDIHEDLYQLVKYSCGELCTAEQLDKVMKVWTTFLEPMLCVPSRAQGAEDTE 702
            H     PD  +  ++  L+ ++  ++   + L+K+      FL     + +      D +
Sbjct: 1415 HLLYFMPDYKVCSNISSLILFAAEKIVQKQDLEKIENFLNFFLLTFFYIDN------DKK 1468

Query: 703  D-VVKAKNTEDVVNTENNS 720
            D ++  K+  +  NT NN+
Sbjct: 1469 DLIIDEKSPNNNNNTNNNT 1487



 Score =  102 bits (255), Expect = 7e-20
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 28/243 (11%)

Query: 1143 DTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAI 1202
            +    ++YDRF+++L   +DG S+  K+ED CR+ +G  SY+LFTLDKLI +L +QLQA+
Sbjct: 1667 ELSDVERYDRFISSLQEFMDGDSNQEKYEDSCRSYLGISSYILFTLDKLINQLARQLQAL 1726

Query: 1203 ASEEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPKKL---SIQ 1259
               E   +LL L+  E     G + D +YH     +L +E ++  E+    + +   +I+
Sbjct: 1727 LQGENCLRLLYLFTLEVKSYTG-WSDELYHSKVLEVLKDERVFLFEFEATSQPMGTFTIE 1785

Query: 1260 LMDCGHDK-----PEVTAVSVDP-KFSTYLHNDFLSVVPDKKE--------KSRLFLKRN 1305
            LMD   +       EV A+S    + S          V D K+          ++FLKRN
Sbjct: 1786 LMDPTSESMLKKAEEVIAISERMIQDSEAEMEKAKQYVADYKQLDSNIDPRTHKVFLKRN 1845

Query: 1306 KHRYAGSSEFSSQAMEGLQVFN----------GLECKIACSSSKVSYVLDTEDVLYRKKS 1355
              R        +Q  +  ++ +          GLEC+I   + ++ YV DT D  YRK +
Sbjct: 1846 IPRVLSEIPTENQQQQQQKLMDEALKDTINETGLECRICTQTYRLFYVEDTTDYFYRKNA 1905

Query: 1356 KRR 1358
              R
Sbjct: 1906 ISR 1908



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 50/189 (26%), Positives = 100/189 (52%), Gaps = 12/189 (6%)

Query: 39  EDEQPPAKKPVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAV 98
           +  QPP KK  E + A N+V KIK RF     VY+ FL+IL+ Y  E + I +VY +VA 
Sbjct: 613 QQNQPPQKKQTELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVAD 672

Query: 99  LFQGHADLLDEFTHFLPDASAAASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSH 158
           LF+ H DLL EFT FLPDA  A+ +      N+VL  ++  M   +Q    ++++     
Sbjct: 673 LFRAHPDLLSEFTQFLPDAVNASQN-----PNAVLEQQQQQMLQQQQLQQQQQQQ----- 722

Query: 159 CDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGGQYRER 218
             +   + +      +  L+ +++Q+++ ++++  ++  ++  ++  +  +    Q +++
Sbjct: 723 --QQQMLQQQQQQQQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 780

Query: 219 LSHKRKSDR 227
              +++  +
Sbjct: 781 QQQQQQQQK 789



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 72/314 (22%), Positives = 137/314 (42%), Gaps = 36/314 (11%)

Query: 42  QPPAKKPVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQ 101
           Q P ++  +F+ A  F+ ++K +F     +Y  FLDI+   +  N     V   V  LF+
Sbjct: 406 QSPIRQQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVIELFK 465

Query: 102 GHADLLDEFTHFLP-----DASA---AASSYYMSARNSVLRDRRSAMPTVRQ---AHVVK 150
           GH  L+  F  FLP     D S        + + + NS ++ ++      +Q    +VVK
Sbjct: 466 GHKHLISGFNTFLPADYRIDVSTFDDDGKPFSVPSPNSNIQQQQQQQQQQQQQQPQYVVK 525

Query: 151 RE----RTTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERDGR 206
           ++    + T SH    P++++    H          Q++ ++ +   ++   +  ++  +
Sbjct: 526 QQPQQTQQTQSHILPQPTMNQQIQQH---------FQQQHIQMQLQQQQAALQAQQQQAQ 576

Query: 207 DHEHDGGQYRERLSHKRKSDRKAEDFGAEPLLDADEFFGTRPMSSTCDDKKSLKTKYPEE 266
                  Q +++ +   ++ ++A+   A     A E    +   +    KK  +  +   
Sbjct: 577 QQAALQAQQQQQAA--LQAQQQAQQQAALQAQQAAE----KAQQNQPPQKKQTELDHARN 630

Query: 267 FAFCDKVKEKLRN-PDGYQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLMEEFNEFL 325
           +    K+K +  N PD Y+ FL+ LH Y  E  T +++   V DL   +PDL+ EF +FL
Sbjct: 631 YV--KKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPDLLSEFTQFL 688

Query: 326 ---VQAEKNDGGFL 336
              V A +N    L
Sbjct: 689 PDAVNASQNPNAVL 702



 Score = 50.4 bits (119), Expect = 4e-04
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITL-PLEDEQPPAKKP 48
           IDT  VIARV ELF+GH+ LI GFNTFLP  Y I +   +D+  P   P
Sbjct: 451 IDTPVVIARVIELFKGHKHLISGFNTFLPADYRIDVSTFDDDGKPFSVP 499



 Score = 50.4 bits (119), Expect = 4e-04
 Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 265  EEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGD-LLGKYPDLMEEFNE 323
            EE  F  KV+  + N   Y EFLKCL+++S+EII++ EL  LV D LL + P L E F  
Sbjct: 1092 EELDFFHKVRTGVPNNKLYNEFLKCLNLFSQEIISRTELVLLVKDILLPRLPALFEWFKS 1151

Query: 324  FL 325
            F+
Sbjct: 1152 FI 1153



 Score = 43.1 bits (100), Expect = 0.066
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 6/69 (8%)

Query: 1099 RNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALY 1158
            +  ++FYG+++FY+  RL+Q LYER+  AK  + SA K    SH T S     RF +A  
Sbjct: 1541 KTKRIFYGNNTFYIFLRLYQILYERLHKAKELAESAMK----SHWT-SKPNVTRFFSA-N 1594

Query: 1159 SLLDGSSDN 1167
            S  D ++D+
Sbjct: 1595 SNTDSNNDS 1603


>gb|AAN74748.1| hypothetical protein [Marchantia polymorpha]
          Length = 366

 Score =  212 bits (540), Expect = 6e-53
 Identities = 100/192 (52%), Positives = 141/192 (73%), Gaps = 6/192 (3%)

Query: 401 KDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSED 460
           K K+  KPI+ELD+SNC+RCT SYRLL K+YP PI ++++ +  +VLND WVS +   E 
Sbjct: 179 KKKYSNKPISELDMSNCERCTTSYRLLTKSYPKPICTHRTDLAREVLNDSWVSTSQSKE- 237

Query: 461 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRID 520
             FKH+ KN+YEE+LFRCEDD+FE D+ LES+  + +RV EL E + +  +     +  +
Sbjct: 238 --FKHIEKNKYEENLFRCEDDQFETDVFLESIKDSIRRVTELLETLEDPSLS---KLNFE 292

Query: 521 EHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWA 580
           +HLT +N RCIER+YG HGL+V++ +R+N  +ALP+IL RLKQKQDE +  R   ++VWA
Sbjct: 293 DHLTPINFRCIERIYGKHGLEVVDQVRRNDSVALPIILNRLKQKQDEVSSFRTKMNEVWA 352

Query: 581 EIYAKNYHKSLD 592
           ++YAKNYH SL+
Sbjct: 353 KVYAKNYHTSLN 364



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 58/155 (37%), Positives = 84/155 (53%), Gaps = 19/155 (12%)

Query: 52  EEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQ-----GHADL 106
           ++ INF+NK+K RF  D+HVYK+FL+ILNMYRK NK I+E+Y EVA LF       HADL
Sbjct: 95  DQTINFINKVKTRFSADEHVYKAFLEILNMYRKGNKPISEMYQEVATLFSEHADGEHADL 154

Query: 107 LDEFTHFLPDASAAASSYYMSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVD 166
           L+EFT F PD+S A     +       R ++ +   + +  +   ER T S+     S  
Sbjct: 155 LEEFTSFRPDSSGAPVGPLLPTS----RKKKYSNKPISELDMSNCERCTTSYRLLTKSYP 210

Query: 167 RPDPDHDRGLLR----------AEKEQRRRVEKEK 191
           +P   H   L R          ++ ++ + +EK K
Sbjct: 211 KPICTHRTDLAREVLNDSWVSTSQSKEFKHIEKNK 245


>gb|AAO72669.1| unknown [Oryza sativa (japonica cultivar-group)]
          Length = 181

 Score =  203 bits (517), Expect = 3e-50
 Identities = 110/194 (56%), Positives = 131/194 (66%), Gaps = 15/194 (7%)

Query: 321 FNEFLVQAEKNDGGFLAGVMNKKSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRE 380
           FNEFL   E  DG FLAGV +K+         + +K E+R           D +++    
Sbjct: 3   FNEFLEHCENIDG-FLAGVFSKRQTG------RIVKTEERKEGGKGTEKEPDRIEKVPAY 55

Query: 381 CRERDRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKS 440
                +  V S+KE        K+  KP++ELDLSNC RCTPSYRLLPK+YP+P A  K+
Sbjct: 56  KEAPSQKPVFSSKE--------KYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKT 107

Query: 441 KIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNLTTKRVE 500
           ++GA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN  TKRVE
Sbjct: 108 ELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVE 167

Query: 501 ELFEKINNNVIKGD 514
           EL EK+ +N +K D
Sbjct: 168 ELIEKMQDNSLKPD 181


>ref|NP_033214.1| transcriptional regulator, SIN3B [Mus musculus]
           gi|642621|gb|AAA69774.1| mSin3B gene product
          Length = 954

 Score =  198 bits (503), Expect = 1e-48
 Identities = 152/490 (31%), Positives = 233/490 (47%), Gaps = 90/490 (18%)

Query: 257 KSLKTKYPEEFAFCDKVKEK-LRNPDGYQEFLKCLHIYSKEII----------TQQELQS 305
           +S   ++    ++ +K+K + L +P+ Y+ FL+ LH Y KE +          +++E+ +
Sbjct: 148 ESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFT 207

Query: 306 LVGDLLGKYPDLMEEFNEFLVQA----------------EKNDGGFLAGVMNKK----SL 345
            V +L     DL+ EF +FL +A                +KN+   L    NKK    SL
Sbjct: 208 EVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGSCEMNSGQKNEEKSLEH--NKKRSRPSL 265

Query: 346 W--IEGPGLKPMKAEDRDR------------------DRDRDRYRDDGMKERDRECRERD 385
              +  P  K MK                        D+ R   +   + E    C    
Sbjct: 266 LRPVSAPAKKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALF 325

Query: 386 RSTVVSNKEV-------------------SGLKIKDKHFLKPIN---------ELDLSNC 417
              +VS  E+                   S L +K+  F  P++         E+D ++C
Sbjct: 326 NQELVSGSELLQLVSPFLGKFPELFAQFKSFLGVKELSFAPPMSDRSGDGISREIDYASC 385

Query: 418 DRCTPSYRLLPKNYPIPIASYKSKIGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 477
            R   SYR LPK Y  P  S ++ I  +VLND WVS  S SED +F   +K  YEE L R
Sbjct: 386 KRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHR 445

Query: 478 CEDDRFELDMLLESVNLTTKRVEELFEKINNNVIKGDRPVRIDEHL----TALNLRCIER 533
           CED+RFELD++LE+   T + +E + +K++    +    +R+D+ L      +  R I R
Sbjct: 446 CEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEVIQRRAIHR 505

Query: 534 LYGDHGLDVMEVLRKNAPLALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDH 593
           +YGD   +V+E L++N   A+PV+L RLK K++EW   +  F+K+W E Y K Y KSLDH
Sbjct: 506 IYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDH 565

Query: 594 RSFYFKQQDTKRLSTKALLAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDI 653
           ++  FKQ DTK L +K+LL E++ + + +H+E       A  S     P+L F Y D  I
Sbjct: 566 QAVNFKQNDTKALRSKSLLNEIESVYD-EHQEQHSEGRSAPSSE----PHLIFVYEDRQI 620

Query: 654 HEDLYQLVKY 663
            ED   L+ Y
Sbjct: 621 LEDAAALISY 630



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 65/161 (40%), Positives = 79/161 (48%), Gaps = 44/161 (27%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPL---------------------- 38
           IDT GVI RV +LF  H DLI+GFN FLP GY I +P                       
Sbjct: 70  IDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDC 129

Query: 39  ----------ED--EQPPAKKPVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKE- 85
                     ED  + P     VEF  AI++VNKIK RF     +Y+SFL+IL+ Y+KE 
Sbjct: 130 GEDFKQMSYKEDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQ 189

Query: 86  ---------NKCINEVYHEVAVLFQGHADLLDEFTHFLPDA 117
                         EV+ EVA LF+G  DLL EF  FLP+A
Sbjct: 190 LHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 29/194 (14%)

Query: 1055 GEAEGMVDAHDVEGDGMSLTISERFLQTVKPLAKYVPAALHEKDRNSQVFYGSDSFYVLF 1114
            G ++   D  D + D  S     R     KP A   P      D    +F+ ++++Y   
Sbjct: 665  GTSDDSADERDRDRD--SAEPERRRPTDEKPPADASPEPPKVLDDVYSLFFANNNWYFFL 722

Query: 1115 RLHQTLYERI---------------------------QSAKFNSSSAEKKWKASHDTGST 1147
            RLHQTL  R+                           +  K    + E + K   +    
Sbjct: 723  RLHQTLCARLLKIYRQAQKQLLEHRREQEREQLLCEGRREKAADPAMELRLKQPSEVELE 782

Query: 1148 DQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEEM 1207
            + Y  F++ + SLL+GS D T++ED  R +    +Y+ FT+DKL+  + +QL  + S+++
Sbjct: 783  EYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYIGFTMDKLVQNIARQLHHLVSDDV 842

Query: 1208 DNKLLQLYAYEKSR 1221
              K+++LY  E+ R
Sbjct: 843  CLKVVELYLNEQQR 856



 Score = 50.8 bits (120), Expect = 3e-04
 Identities = 24/70 (34%), Positives = 39/70 (55%)

Query: 46  KKPVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHAD 105
           K PV  E+A+ +++++K RF  D   Y  FL+I+  ++ ++     V   V+ LF  H D
Sbjct: 29  KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 88

Query: 106 LLDEFTHFLP 115
           L+  F  FLP
Sbjct: 89  LIVGFNAFLP 98


>gb|EAL25992.1| GA21341-PA [Drosophila pseudoobscura]
          Length = 1749

 Score =  190 bits (483), Expect = 3e-46
 Identities = 146/512 (28%), Positives = 254/512 (49%), Gaps = 56/512 (10%)

Query: 268  AFCDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLMEEFNEFL-- 325
            AF DKV++ LR+P+ Y  FL+CL ++++EI+++ EL  LV   L K+PDL+  F++FL  
Sbjct: 808  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKAELLGLVSPFLMKFPDLLRWFSDFLGP 867

Query: 326  -VQAEKNDGGFLAGVMNKKSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECRER 384
             + + +  G    G      L I+G    P+ A  R          D     RDRE R  
Sbjct: 868  PIGSGQGQGQGQVGGAGGAGL-IDG---MPLAATQRQGGSSNSSSHD-----RDRE-RGG 917

Query: 385  DRSTVVSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGA 444
            +  T                  + + ++DLS C R   SY  LP++      S ++ +  
Sbjct: 918  NHPTAA----------------EYVQDVDLSACKRLGASYCALPQSSVPKKCSGRTALCR 961

Query: 445  KVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLF----RCEDDRFELDMLLESVNLTTKRV 499
            +VLND WVS  T  SED +F   RK Q+EE+++    R ED+RFELD+++E  + T + +
Sbjct: 962  EVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRNIHRTEDERFELDLVIEVNSATIQVL 1021

Query: 500  EELFEKINNNVIKGDRPVRIDEHL----TALNLRCIERLYGDHGLDVMEVLRKNAPLALP 555
            E + +K++    +      +D+ L      ++ R I R+YGD   ++++ ++KN  +A+P
Sbjct: 1022 EGVNKKMSRMSSEELAKFHLDDTLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPSVAVP 1081

Query: 556  VILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEV 615
            +IL RLK K++EW   +  F+K W E   K Y KSLDH++  FK  D K L +K+L  E+
Sbjct: 1082 IILKRLKVKEEEWRDAQKGFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEI 1141

Query: 616  KEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQL----VKYSCGELCTA 671
            + + +++H ++D  +  A        P+L   Y D  I +D   L    VK   G     
Sbjct: 1142 ETLYDERHDQEDDAMEQAG-------PHLVLPYKDKTILDDAANLLIHHVKRQTG--IQK 1192

Query: 672  EQLDKVMKVWTTFLEPMLCVPSR--AQGAEDTEDVVKAKNTEDVVNTENNSVKSGIVSVA 729
            ++  K+ ++   F+  +   P +  +    D +D +K    +  +   ++  ++   S +
Sbjct: 1193 QEKQKIKQIIRQFVPDLFFAPRQPLSDDERDDDDNIKMDVDQSPLGRADSVTRNTKGSPS 1252

Query: 730  ESGD---SKAWQLNGDSGVREDRCLDSDHTVY 758
            E G    S A   +  + V+ +   D  ++++
Sbjct: 1253 EGGSPACSTASTSSSAAAVKNEADEDESYSLF 1284



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 28/215 (13%)

Query: 1096 EKDRNSQVFYGSDSFYVLFRLHQTLYERIQSA-----------------KFNSSSAEKKW 1138
            ++D +  +F+ S+++Y+  RLH  L +R+                    +  S++   + 
Sbjct: 1276 DEDESYSLFFASNNWYLFLRLHAILCDRLHHMYERARLLAIEEERCRVNRRESTATALRL 1335

Query: 1139 KASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQ 1198
            K   +    D Y  F++ L ++LDG+ D+  FED  R + G  +Y+ FTLDK++   V+Q
Sbjct: 1336 KPKPEVQVEDYYPTFLDMLKNVLDGNMDSNTFEDTMREMFGIYAYVSFTLDKVVSNAVRQ 1395

Query: 1199 LQAIASEEMDNKLLQLYAYEKSR-KLGKFI---------DIVYHENACVILHEENIYRIE 1248
            LQ   +E      ++LYA E+ R   G +          +++Y   A  + +EEN +++ 
Sbjct: 1396 LQYCVTERAALDCVELYATEQRRGSTGGYCRDAHKTFDREMMYQRKAESMFNEENCFKVF 1455

Query: 1249 YSPGPKKLSIQLMDCGHDKPEVTAVSVDPKFSTYL 1283
                  +++I+L+D   ++ +  A+    KFS Y+
Sbjct: 1456 IYKINCRVTIELLDSEPEEADKPALKAQ-KFSKYV 1489



 Score = 51.6 bits (122), Expect = 2e-04
 Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 64  RFEGDDHVYKSFLDILNMYRKENKCINE-------------VYHEVAVLFQGHADLLDEF 110
           RF+     YK FL+IL+ Y+KE K + E             VY +VA LF    DLL EF
Sbjct: 448 RFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVYTQVAKLFGQDEDLLREF 507

Query: 111 THFLPDASAAASS---YYMSARNSV 132
             FLPDA+   SS    YM+  +SV
Sbjct: 508 GQFLPDATNHQSSGGGQYMAKASSV 532



 Score = 50.8 bits (120), Expect = 3e-04
 Identities = 23/36 (63%), Positives = 27/36 (74%)

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITL 36
           IDT GVI RV  LF+GH +LI GFN FLP GY+I +
Sbjct: 256 IDTPGVIERVSTLFKGHTELIYGFNMFLPPGYKIEI 291



 Score = 46.2 bits (108), Expect = 0.008
 Identities = 21/69 (30%), Positives = 43/69 (61%), Gaps = 4/69 (5%)

Query: 49  VEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINE--VYHEVAVLFQGHADL 106
           ++ E+A+++++++K ++     +Y +FLDI+  ++    CI+   V   V+ LF+GH +L
Sbjct: 218 LKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSH--CIDTPGVIERVSTLFKGHTEL 275

Query: 107 LDEFTHFLP 115
           +  F  FLP
Sbjct: 276 IYGFNMFLP 284



 Score = 40.4 bits (93), Expect = 0.43
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 15/70 (21%)

Query: 280 PDGYQEFLKCLHIYSKE-------------IITQQELQSLVGDLLGKYPDLMEEFNEFLV 326
           P  Y++FL+ LH Y KE             ++T+QE+ + V  L G+  DL+ EF +FL 
Sbjct: 453 PAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 512

Query: 327 QA--EKNDGG 334
            A   ++ GG
Sbjct: 513 DATNHQSSGG 522


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.315    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,448,125,946
Number of Sequences: 2540612
Number of extensions: 111672586
Number of successful extensions: 391392
Number of sequences better than 10.0: 2412
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 1963
Number of HSP's that attempted gapping in prelim test: 345329
Number of HSP's gapped (non-prelim): 24065
length of query: 1389
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1248
effective length of database: 505,134,102
effective search space: 630407359296
effective search space used: 630407359296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)


Lotus: description of TM0028b.5