BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0026.4
(161 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT42260.1| myocilin [Danio rerio] gi|62632725|ref|NP_0010150... 41 0.013
gb|AAW82480.1| TPR [Xenopus laevis] 39 0.049
ref|YP_156501.1| Signal transduction histidine kinase [Idiomarin... 39 0.064
dbj|BAB32977.1| lamin B3 [Carassius auratus] 39 0.064
ref|YP_075856.1| hypothetical protein STH2027 [Symbiobacterium t... 38 0.083
ref|NP_928927.1| cell division protein [Photorhabdus luminescens... 38 0.083
gb|AAH67586.1| Neuroblastoma myc-related oncogene 1 [Danio rerio... 38 0.083
gb|AAH59793.1| Nmyc1 protein [Danio rerio] 38 0.083
gb|AAM91167.1| putative myosin heavy chain [Arabidopsis thaliana... 38 0.083
emb|CAI20708.1| novel protein (zgc:85706) [Danio rerio] 38 0.083
gb|AAM15156.1| putative myosin heavy chain [Arabidopsis thaliana... 38 0.083
pir||F84730 probable myosin heavy chain [imported] - Arabidopsis... 38 0.083
gb|AAT90361.1| N-myc-like protein [Danio rerio] 38 0.083
gb|AAP05444.1| hypothetical protein CCA00702 [Chlamydophila cavi... 38 0.11
ref|XP_221489.3| PREDICTED: similar to KIAA1000 protein [Rattus ... 37 0.14
ref|ZP_00322424.1| COG1196: Chromosome segregation ATPases [Pedi... 37 0.14
ref|XP_537539.1| PREDICTED: similar to DVL-binding protein DAPLE... 37 0.19
emb|CAG62239.1| unnamed protein product [Candida glabrata CBS138... 37 0.19
emb|CAE75717.1| related to EDE1 protein [Neurospora crassa] gi|3... 37 0.19
emb|CAG00138.1| unnamed protein product [Tetraodon nigroviridis] 37 0.19
>gb|AAT42260.1| myocilin [Danio rerio] gi|62632725|ref|NP_001015062.1| myocilin
[Danio rerio]
Length = 474
Score = 40.8 bits (94), Expect = 0.013
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 92 EALKAALK--QADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLR 149
EAL A L +A PE S + L D + E +++EK RL+ Q +D+ +RME LR
Sbjct: 68 EALVARLVGGEAMPESSQSSGSGLQDSYNQVMGENAQLKREKQRLDRQVQDLQQRMEELR 127
Query: 150 ARYDSYRANP 159
+ R+ P
Sbjct: 128 QEAERLRSRP 137
>gb|AAW82480.1| TPR [Xenopus laevis]
Length = 1997
Score = 38.9 bits (89), Expect = 0.049
Identities = 28/105 (26%), Positives = 55/105 (51%), Gaps = 8/105 (7%)
Query: 49 VKTPLQEFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKAALKQADPEGSVG 108
+K ++ + E L+++ ++ TA+ QI+EK E+ + ++Q + + G
Sbjct: 1183 IKEHQEQISRMQAELSHLHKDLQDKTAQEEQMRQQINEKEEKTKKTLLVVRQKLAQNN-G 1241
Query: 109 ALKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRARYD 153
A + L RE D++Q+ + LE Q+E++ RM LR++YD
Sbjct: 1242 AKEQLT-------RENEDLKQKNANLEQQKEELEVRMSALRSQYD 1279
>ref|YP_156501.1| Signal transduction histidine kinase [Idiomarina loihiensis L2TR]
gi|56180230|gb|AAV82952.1| Signal transduction histidine
kinase [Idiomarina loihiensis L2TR]
Length = 577
Score = 38.5 bits (88), Expect = 0.064
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 58 SLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEA--------LKAALKQADPEGSVGA 109
+L R + L ++H V A +Q+ + +EE+++ LKAA +Q D + ++
Sbjct: 204 NLERSRIRLDDQHNNELVLVEQAYNQLLDNIEEYQSDLDRTQKKLKAANRQLDEQNAI-L 262
Query: 110 LKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRARYDSYR 156
+ + K S+ ++ LD+ Q K+ LE +QE + R + RA ++ R
Sbjct: 263 EQEVARKTSSLSQVMLDLEQRKNELEMRQEKLEREVGQRRAIENTLR 309
>dbj|BAB32977.1| lamin B3 [Carassius auratus]
Length = 589
Score = 38.5 bits (88), Expect = 0.064
Identities = 27/88 (30%), Positives = 46/88 (51%), Gaps = 3/88 (3%)
Query: 62 EAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKAAL--KQADPEGSVGALKALVDKLST 119
E L EEHR LTAR E ++ + + L+AAL K+AD + + + L ++LS
Sbjct: 111 ELTQLQEEHRRLTARNSKKESELSTAVGHWRNLEAALNSKEADYANVLSSNRRLENQLSE 170
Query: 120 TAREELDIRQEKSRLETQ-QEDVLRRME 146
+ ++ L+TQ ++LRR++
Sbjct: 171 LTTQAANLESGLQNLKTQLNSEMLRRVD 198
>ref|YP_075856.1| hypothetical protein STH2027 [Symbiobacterium thermophilum IAM
14863] gi|51856854|dbj|BAD41012.1| conserved
hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 316
Score = 38.1 bits (87), Expect = 0.083
Identities = 33/118 (27%), Positives = 59/118 (49%), Gaps = 13/118 (11%)
Query: 41 LSRNIIASVKTPLQEFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKAALKQ 100
L+R + A+ + ++ L R+A + EE+R ARV + Q++++ + E L++
Sbjct: 4 LNRRLAAAAERQARKE-KLERQAARVEEEYRSAAARVRELKRQLEKEQRDVEQLES---- 58
Query: 101 ADPEGSVGALKALVDKLSTTAREELD-IRQEKSRLETQQEDVLRRMEPLRARYDSYRA 157
G+L +L+ L T E LD R+E + + E+ R E LRA ++ RA
Sbjct: 59 -------GSLGSLLATLFTDRTERLDRERREAAEALVRYEEARRWAEQLRADLEAIRA 109
>ref|NP_928927.1| cell division protein [Photorhabdus luminescens subsp. laumondii
TTO1] gi|36785011|emb|CAE13932.1| cell division protein
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|41017315|sp|Q7N6B7|MUKB_PHOLL Chromosome partition
protein mukB (Structural maintenance of chromosome
related protein)
Length = 1482
Score = 38.1 bits (87), Expect = 0.083
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 8 NQIRSLAFDQDLFWELHSSLSL----AEELTGLINQLLSRNIIASVKTPLQEFLSLLREA 63
N++ +L ++D E +++LS + +Q + +++ + T + + LR+
Sbjct: 785 NRLEALNLERDTLAERYATLSFDVQKIQRAHQAFSQFVGKHLSVAFDTDPEAEIRELRQ- 843
Query: 64 VPLYEEHRELTARVFFAEHQIDEKMEEFEALKAALKQAD---PEGSVGALKALVDKLSTT 120
H EL + E Q ++ +++ K +L + P+ ++ + L+D++
Sbjct: 844 -----RHTELERELSRFEEQTQQQRQQYTQAKESLTTLNRLIPQVTLLLDETLIDRVEEI 898
Query: 121 AREELDIRQEKSRLETQQEDVLRRMEPLRA 150
REELD QE +R Q L ++EP+ A
Sbjct: 899 -REELDEAQEAARFLQQHGSALAKLEPMVA 927
>gb|AAH67586.1| Neuroblastoma myc-related oncogene 1 [Danio rerio]
gi|47271378|ref|NP_997779.1| neuroblastoma myc-related
oncogene 1 [Danio rerio]
Length = 455
Score = 38.1 bits (87), Expect = 0.083
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 98 LKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRAR 151
L D V LK D +S+ +E ++QEK RL+ +++ +LRR+E R R
Sbjct: 402 LAHNDKAAKVVILKKATDYVSSLEAQEFRLQQEKDRLQAKRQQLLRRLEQARTR 455
>gb|AAH59793.1| Nmyc1 protein [Danio rerio]
Length = 486
Score = 38.1 bits (87), Expect = 0.083
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 98 LKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRAR 151
L D V LK D +S+ +E ++QEK RL+ +++ +LRR+E R R
Sbjct: 433 LAHNDKAAKVVILKKATDYVSSLEAQEFRLQQEKDRLQAKRQQLLRRLEQARTR 486
>gb|AAM91167.1| putative myosin heavy chain [Arabidopsis thaliana]
gi|20260364|gb|AAM13080.1| putative myosin heavy chain
[Arabidopsis thaliana] gi|15982767|gb|AAL09731.1|
At2g32240/F22D22.1 [Arabidopsis thaliana]
Length = 568
Score = 38.1 bits (87), Expect = 0.083
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 37 INQLLSRNIIASVKTPLQEFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKA 96
++Q LS + ++ ++EF S EA L E+ R+L ++ E Q+ E + +LK
Sbjct: 31 LHQSLSIDSEHRLQKAMEEFTSRDSEASSLTEKLRDLEGKIKSYEEQLAEASGKSSSLKE 90
Query: 97 ALKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVL 142
L+Q G + A +++ +KL ++E D QEKS + + ++L
Sbjct: 91 KLEQT--LGRLAAAESVNEKL----KQEFDQAQEKSLQSSSESELL 130
>emb|CAI20708.1| novel protein (zgc:85706) [Danio rerio]
Length = 496
Score = 38.1 bits (87), Expect = 0.083
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 98 LKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRAR 151
L D V LK D +S+ +E ++QEK RL+ +++ +LRR+E R R
Sbjct: 443 LAHNDKAAKVVILKKATDYVSSLEAQEFRLQQEKDRLQAKRQQLLRRLEQARTR 496
>gb|AAM15156.1| putative myosin heavy chain [Arabidopsis thaliana]
gi|18402909|ref|NP_565741.1| expressed protein
[Arabidopsis thaliana]
Length = 775
Score = 38.1 bits (87), Expect = 0.083
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 37 INQLLSRNIIASVKTPLQEFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKA 96
++Q LS + ++ ++EF S EA L E+ R+L ++ E Q+ E + +LK
Sbjct: 238 LHQSLSIDSEHRLQKAMEEFTSRDSEASSLTEKLRDLEGKIKSYEEQLAEASGKSSSLKE 297
Query: 97 ALKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVL 142
L+Q G + A +++ +KL ++E D QEKS + + ++L
Sbjct: 298 KLEQT--LGRLAAAESVNEKL----KQEFDQAQEKSLQSSSESELL 337
>pir||F84730 probable myosin heavy chain [imported] - Arabidopsis thaliana
Length = 1269
Score = 38.1 bits (87), Expect = 0.083
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 37 INQLLSRNIIASVKTPLQEFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKA 96
++Q LS + ++ ++EF S EA L E+ R+L ++ E Q+ E + +LK
Sbjct: 796 LHQSLSIDSEHRLQKAMEEFTSRDSEASSLTEKLRDLEGKIKSYEEQLAEASGKSSSLKE 855
Query: 97 ALKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVL 142
L+Q G + A +++ +KL ++E D QEKS + + ++L
Sbjct: 856 KLEQT--LGRLAAAESVNEKL----KQEFDQAQEKSLQSSSESELL 895
Score = 37.4 bits (85), Expect = 0.14
Identities = 27/102 (26%), Positives = 50/102 (48%), Gaps = 5/102 (4%)
Query: 55 EFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKAALKQADPEGSVGALKALV 114
EF LL+ +E E A + +++EKM E E ++AALK S G L A+
Sbjct: 237 EFSELLKSTKESAKEMEEKMASLQQEIKELNEKMSENEKVEAALK-----SSAGELAAVQ 291
Query: 115 DKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRARYDSYR 156
++L+ + L+ Q+ S E +++ + +E +A ++
Sbjct: 292 EELALSKSRLLETEQKVSSTEALIDELTQELEQKKASESRFK 333
>gb|AAT90361.1| N-myc-like protein [Danio rerio]
Length = 456
Score = 38.1 bits (87), Expect = 0.083
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 98 LKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRAR 151
L D V LK D +S+ +E ++QEK RL+ +++ +LRR+E R R
Sbjct: 403 LAHNDKAAKVVILKKATDYVSSLEAQEFRLQQEKDRLQAKRQQLLRRLEQARTR 456
>gb|AAP05444.1| hypothetical protein CCA00702 [Chlamydophila caviae GPIC]
gi|29840460|ref|NP_829566.1| hypothetical protein
CCA00702 [Chlamydophila caviae GPIC]
Length = 578
Score = 37.7 bits (86), Expect = 0.11
Identities = 39/175 (22%), Positives = 79/175 (44%), Gaps = 18/175 (10%)
Query: 2 ASRRVLNQI-RSLAFDQDLFWELHSSLSLAEELTGLINQLLSRNIIASVKTPLQEFLSLL 60
AS++ Q+ + LA Q+L + +L + E + LL +S ++ L++
Sbjct: 296 ASQKTQEQLEQQLASQQELVVKTEEALRTSTEEQLKLEALLKEAAGSSQDITAEQLLAVT 355
Query: 61 REAVPLYEEHRELTARVFFAEHQIDEKMEEFEALK-------AALKQA------DPEGSV 107
EA ++ +L ++ + Q++ + ++++ ++ ALKQ D E
Sbjct: 356 SEAEGYKQQLEQLQLKITALQQQLEHQRQQYQEMQELDIKQEGALKQKLSNLEKDKEDLH 415
Query: 108 GALKALVDKLSTTAREELDIR----QEKSRLETQQEDVLRRMEPLRARYDSYRAN 158
AL+ + K + +D+ Q K LET+ + +L+ ++ L R D YR N
Sbjct: 416 AALETSLKKEKYLQGQLVDVEGQVEQLKQVLETEGKKLLKDIQILDQRLDVYRLN 470
>ref|XP_221489.3| PREDICTED: similar to KIAA1000 protein [Rattus norvegicus]
Length = 2035
Score = 37.4 bits (85), Expect = 0.14
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 71 RELTARVFFAEHQIDEKMEEFEALKAALKQADPEGSVGALKALVDKLSTTAREELDIRQE 130
R+ AR H ++E FEA +LK+ E +V L+ V+ L R+ LD QE
Sbjct: 1183 RQQEARFQKLRHDMEETTRHFEATSVSLKRRHAE-NVAELEGQVEHLQQV-RQVLD--QE 1238
Query: 131 KSRLETQQEDVLRRMEPL 148
KS L+ Q +D+L R++ +
Sbjct: 1239 KSDLQLQVDDLLTRVDQM 1256
>ref|ZP_00322424.1| COG1196: Chromosome segregation ATPases [Pediococcus pentosaceus
ATCC 25745]
Length = 1176
Score = 37.4 bits (85), Expect = 0.14
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 55 EFLSLLREAVPLYEEHRELTARVFFAEHQIDEKMEEFEALKAAL--KQADPEGSVGALKA 112
+ + L R L EH R + + + + + E + LK L K+A E + G L A
Sbjct: 289 KLVKLNRLEQQLEGEHDLRVERQKYVDQEKERLVSEQQVLKKQLVEKKASLEAAQGQLAA 348
Query: 113 LVDKLSTTAREELDIRQEKSRLETQQEDVLRRMEPLRARY 152
+ KL+ T ++ L + E LE Q+E + R +E LRA Y
Sbjct: 349 VQQKLTNT-KQSLKVL-ESDHLEQQKEALKREIEDLRAEY 386
>ref|XP_537539.1| PREDICTED: similar to DVL-binding protein DAPLE [Canis familiaris]
Length = 2039
Score = 37.0 bits (84), Expect = 0.19
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 20 FWELHSSLSLAEELTGLINQLLSRNI-----IASVKTPLQEFLSLLREAVPLYEEHRELT 74
F ++ + EEL +++L N +AS+KT ++ +L RE+ L E+R+L
Sbjct: 997 FEQVKEKVERVEELEKELHRLEKENEKLAQKVASLKTATEKVDTLERESRGLALENRKLR 1056
Query: 75 ARVFFAEHQIDEKMEEFEALKAALKQADPEGSVGALKALVDKLSTTAREELDIRQEKSRL 134
+ + E L+ KQ D E L+ +V+ + T+ + I +E L
Sbjct: 1057 KSL----DTLQNVSVRLEGLERDNKQLDEENL--ELRRMVETMRFTSAKMAQIERENQEL 1110
Query: 135 ETQQEDVLRRMEPLRA 150
E ++E++ +E L+A
Sbjct: 1111 EREKEELRENVELLKA 1126
>emb|CAG62239.1| unnamed protein product [Candida glabrata CBS138]
gi|50293707|ref|XP_449265.1| unnamed protein product
[Candida glabrata]
Length = 1530
Score = 37.0 bits (84), Expect = 0.19
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 124 ELDIRQEKSRLETQQEDVLRRMEPLRARYDSYRANPPF 161
EL++++EKS+ E +QED+ +RME Y+ N PF
Sbjct: 915 ELELKEEKSKFEKEQEDLKQRMEKNPDDYEVVEVNDPF 952
>emb|CAE75717.1| related to EDE1 protein [Neurospora crassa]
gi|32418700|ref|XP_329828.1| hypothetical protein
[Neurospora crassa] gi|28924894|gb|EAA33988.1|
hypothetical protein [Neurospora crassa]
Length = 1285
Score = 37.0 bits (84), Expect = 0.19
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 30 AEELTGLINQLLSRNIIASVKTPLQEFLSLLREAVPLYEEHRELTARVFFAEHQIDEKME 89
A+++ L QL + A K EF + + L +HR + A + Q D+ +
Sbjct: 592 AQDVRALETQLSTAK--AETKKLQTEFAMIEASYLELQNQHRTVVAGL-----QADQ--Q 642
Query: 90 EFEALKAALKQADPEGSVGALKALVDKLSTTAREE-----------LDIRQEKSRLETQQ 138
E +LK ++ + G + LK LV+KL + AR++ + EK +L+ +
Sbjct: 643 ENASLKEKIRTVN--GEIAQLKPLVEKLKSEARQQKGMVAINKKQLSTVEGEKGKLQNEV 700
Query: 139 EDVLRRMEPLRARYDSYRANPP 160
ED+ + E L + D R P
Sbjct: 701 EDLNKEKEELARQVDLARQASP 722
>emb|CAG00138.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1949
Score = 37.0 bits (84), Expect = 0.19
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 9 QIRSLAFDQDLFWELHSS-LSLAEELTGLINQLLSRNIIASVKTPLQEFLSLLREAVPLY 67
Q++SL ++D ELH L E+L +L + + K +QEF L L
Sbjct: 669 QMKSLTQERD---ELHKDVLEATEKLRSQSKELKEAH--SQRKLAMQEFSELNERLTDLR 723
Query: 68 EEHRELTARVFFAEHQIDEKMEEFEALKAALKQADPEGSVGALKALVDKLSTTAREELDI 127
+ LT ++ E +++ + + EAL+ +++A E + +++ ++ S +E +
Sbjct: 724 SAKQRLTRQLRDKEEEMESQTQRVEALRLEVRKA--ERAKKEMESQAEEQSAETLKERKM 781
Query: 128 RQEKSRLETQQEDVLRRME 146
R+ + Q E+ L R++
Sbjct: 782 RERNEQYSRQLEEELERLK 800
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.132 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,939,296
Number of Sequences: 2540612
Number of extensions: 7976871
Number of successful extensions: 39166
Number of sequences better than 10.0: 346
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 329
Number of HSP's that attempted gapping in prelim test: 38998
Number of HSP's gapped (non-prelim): 503
length of query: 161
length of database: 863,360,394
effective HSP length: 117
effective length of query: 44
effective length of database: 566,108,790
effective search space: 24908786760
effective search space used: 24908786760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0026.4