BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0026.17
(369 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 229 8e-59
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 218 3e-55
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 213 7e-54
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 213 7e-54
ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana] 212 1e-53
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 210 5e-53
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 204 3e-51
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 203 8e-51
emb|CAB81576.1| putative protein [Arabidopsis thaliana] gi|15229... 202 1e-50
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 202 1e-50
ref|NP_914485.1| P0489A01.23 [Oryza sativa (japonica cultivar-gr... 197 3e-49
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 196 7e-49
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 196 9e-49
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 196 1e-48
gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353... 196 1e-48
dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cu... 196 1e-48
gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), ... 194 4e-48
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 194 5e-48
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 193 6e-48
ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica c... 193 8e-48
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 229 bits (585), Expect = 8e-59
Identities = 123/230 (53%), Positives = 162/230 (69%), Gaps = 6/230 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T S IRS G IVLNVASSG+A+LLL GGRTAHSRF IPLQ ++T+TC+I DS +LL
Sbjct: 866 TLSTYIRSRGEIVLNVASSGMAALLLDGGRTAHSRFAIPLQVNETSTCSISPDSDLASLL 925
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
+ AK IIWDEAPML+++C+EAL+RTL DI++ ++ KPFGGK + GGDFRQILPVI
Sbjct: 926 LRAKLIIWDEAPMLHRHCYEALDRTLKDIVQADNH----KPFGGKTITFGGDFRQILPVI 981
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPELATEIKEFAD*ILKIGDGDF 206
KG R+ I+ A++ SS LW CKVL LTKNMRL T P IKEF+D ILK+GDG
Sbjct: 982 TKGSREQIIHASLTSSRLWNSCKVLTLTKNMRL--TADPTEKDNIKEFSDWILKLGDGKL 1039
Query: 207 ESNERGESDIEIPKDLLIHDSENPLLDLIDLHIPIWCRT*RLKSFWKDDA 256
GE+ I+IP+D+L+ DS +P+ + + P + ++F+++ A
Sbjct: 1040 SEPNDGEAAIDIPEDMLLLDSLHPIDSIANCVYPNLLQNLNDQTFFRERA 1089
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 218 bits (554), Expect = 3e-55
Identities = 116/206 (56%), Positives = 150/206 (72%), Gaps = 5/206 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T +AA+RS G IVLNVASSGIASLLL GGRTAHSRF IPL D+ + C I S NL+
Sbjct: 1311 TLAAAVRSRGQIVLNVASSGIASLLLEGGRTAHSRFAIPLNPDEFSVCKITPKSDLANLI 1370
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A IIWDEAPM++K CFE+L+++ DI+ +D +K FGGKVVV GGDFRQ+LPVI
Sbjct: 1371 KEASLIIWDEAPMMSKFCFESLDKSFYDILNNKD----NKVFGGKVVVFGGDFRQVLPVI 1426
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTG-SPELATEIKEFAD*ILKIGDGD 205
GR +IV +++N+S LW +CKVLKLTKNMRL + G S E A EI++F+D +L +GDG
Sbjct: 1427 NGAGRVEIVMSSLNASYLWDHCKVLKLTKNMRLLSGGLSSEEAKEIQQFSDWLLAVGDGR 1486
Query: 206 FESNERGESDIEIPKDLLIHDSENPL 231
GE+ I+IP++LLI ++ NP+
Sbjct: 1487 INEPNDGEALIDIPEELLIKEAGNPI 1512
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 213 bits (542), Expect = 7e-54
Identities = 113/206 (54%), Positives = 149/206 (71%), Gaps = 5/206 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T +AA+RS G I LNVASSGIASLLL GGRTAHSRF IPL D+ + C IK S +L+
Sbjct: 988 TLAAAVRSKGQICLNVASSGIASLLLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLI 1047
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A IIWDEAPM++K CFEAL+++ DI+++ D +K FGGKV+V GGDFRQ+LPVI
Sbjct: 1048 KEASLIIWDEAPMMSKFCFEALDKSFSDIIKRVD----NKVFGGKVMVFGGDFRQVLPVI 1103
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTG-SPELATEIKEFAD*ILKIGDGD 205
GR +IV +++N+S LW +CKVL+LTKNMRL S + A EI+EF+D +L +GDG
Sbjct: 1104 NGAGRAEIVMSSLNASYLWDHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGR 1163
Query: 206 FESNERGESDIEIPKDLLIHDSENPL 231
GE I+IP++LLI +++NP+
Sbjct: 1164 VNEPNDGEVIIDIPEELLIQEADNPI 1189
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 213 bits (542), Expect = 7e-54
Identities = 113/206 (54%), Positives = 149/206 (71%), Gaps = 5/206 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T +AA+RS G I LNVASSGIASLLL GGRTAHSRF IPL D+ + C IK S +L+
Sbjct: 979 TLAAAVRSKGQICLNVASSGIASLLLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLI 1038
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A IIWDEAPM++K CFEAL+++ DI+++ D +K FGGKV+V GGDFRQ+LPVI
Sbjct: 1039 KEASLIIWDEAPMMSKFCFEALDKSFSDIIKRVD----NKVFGGKVMVFGGDFRQVLPVI 1094
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTG-SPELATEIKEFAD*ILKIGDGD 205
GR +IV +++N+S LW +CKVL+LTKNMRL S + A EI+EF+D +L +GDG
Sbjct: 1095 NGAGRAEIVMSSLNASYLWDHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGR 1154
Query: 206 FESNERGESDIEIPKDLLIHDSENPL 231
GE I+IP++LLI +++NP+
Sbjct: 1155 VNEPNDGEVIIDIPEELLIQEADNPI 1180
>ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana]
Length = 1238
Score = 212 bits (540), Expect = 1e-53
Identities = 118/206 (57%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T SAA+RS G IVLNVASSGIASLLL GGRTAHSR IPL ++ TCN+K S R NL+
Sbjct: 890 TLSAALRSKGDIVLNVASSGIASLLLEGGRTAHSRSGIPLNPNEFTTCNMKAGSDRANLV 949
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A IIWDEAPM++++CFE+L+R+L DI D +KPFGGKVVV GGDFRQ+LPVI
Sbjct: 950 KEASLIIWDEAPMMSRHCFESLDRSLSDICGNCD----NKPFGGKVVVFGGDFRQVLPVI 1005
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTG-SPELATEIKEFAD*ILKIGDGD 205
P DIV A +NSS LW +CKVL LTKNM L + G S A +IKEF++ IL +GDG
Sbjct: 1006 PGADTADIVMAALNSSYLWSHCKVLTLTKNMCLFSEGLSVSEAKDIKEFSEWILAVGDGR 1065
Query: 206 FESNERGESDIEIPKDLLIHDSENPL 231
GE+ I+IP + LI +++P+
Sbjct: 1066 IGEPNDGEALIDIPSEFLITKAKDPI 1091
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 210 bits (535), Expect = 5e-53
Identities = 114/206 (55%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T SAA+R G+I +NVASSGIASLLL GGRTAHSRF IP+ D TC+I +S N+L
Sbjct: 657 TLSAAVRMRGLISVNVASSGIASLLLQGGRTAHSRFGIPINPDDFTTCHIVPNSDLANML 716
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A IIWDEAPM+++ CFE+L+R+L D++ D KPFGGKVVV GGDFRQ+LPVI
Sbjct: 717 KEASLIIWDEAPMMSRYCFESLDRSLNDVIGNID----GKPFGGKVVVFGGDFRQVLPVI 772
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTG-SPELATEIKEFAD*ILKIGDGD 205
GR +IV A +NSS LW++CKVL LTKNMRL + + A EIKEF++ +L +GDG
Sbjct: 773 HGAGRAEIVLAALNSSYLWEHCKVLTLTKNMRLMSNDLDKDEAEEIKEFSNWLLAVGDGR 832
Query: 206 FESNERGESDIEIPKDLLIHDSENPL 231
GE I+IP++LLI D+ +P+
Sbjct: 833 VSEPNDGEVLIDIPEELLIKDANDPI 858
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 204 bits (519), Expect = 3e-51
Identities = 109/208 (52%), Positives = 144/208 (68%), Gaps = 4/208 (1%)
Query: 29 SAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLIC 88
SAAIRS G I LNVASSGIA+LLL GGRT HSRF IP+ ++++TCNI + S L+
Sbjct: 585 SAAIRSKGDISLNVASSGIAALLLDGGRTTHSRFGIPINPNESSTCNISRGSDLGELVKE 644
Query: 89 AKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPK 148
A IIWDE PM++K+CFE+L+RTL DIM DKPFGGK +V GGDFRQ+LPVI
Sbjct: 645 ANLIIWDETPMMSKHCFESLDRTLRDIMNNPG----DKPFGGKGIVFGGDFRQVLPVING 700
Query: 149 GGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPELATEIKEFAD*ILKIGDGDFES 208
GR++IV A +NSS +W++CKVL+LTKNMRL S +I+ F+ IL +GDG
Sbjct: 701 AGREEIVFAALNSSYIWEHCKVLELTKNMRLLANISEHEKRDIEYFSKWILDVGDGKISQ 760
Query: 209 NERGESDIEIPKDLLIHDSENPLLDLID 236
G + I+IP++ LI+ +P+ +I+
Sbjct: 761 PNDGIALIDIPEEFLINGDNDPVESIIE 788
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 203 bits (516), Expect = 8e-51
Identities = 110/206 (53%), Positives = 141/206 (68%), Gaps = 5/206 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T SA IR IVLNVASSGIASLLL GGRTAHSRF IPL D+ + C IK S NL+
Sbjct: 841 TLSATIRYRDQIVLNVASSGIASLLLEGGRTAHSRFGIPLNPDEFSVCKIKPKSDLANLV 900
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A +IWDEAPM+++ CFEAL+++ DI++ D + FGGKVVV GGDFRQ+ PVI
Sbjct: 901 KKASLVIWDEAPMMSRFCFEALDKSFSDIIKNTDNT----VFGGKVVVFGGDFRQVFPVI 956
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPEL-ATEIKEFAD*ILKIGDGD 205
GR +IV +++N+S LW CKVLKLTKN RL E A EI+EF+D +L +GDG
Sbjct: 957 NGAGRAEIVMSSLNASYLWDNCKVLKLTKNTRLLANNLSETEAKEIQEFSDWLLAVGDGR 1016
Query: 206 FESNERGESDIEIPKDLLIHDSENPL 231
+ G + I+IP+DLLI +++ P+
Sbjct: 1017 INESNDGVAIIDIPEDLLITNADKPI 1042
>emb|CAB81576.1| putative protein [Arabidopsis thaliana]
gi|15229268|ref|NP_189921.1| helicase-related
[Arabidopsis thaliana] gi|11358366|pir||T47377
hypothetical protein T5C2.50 - Arabidopsis thaliana
Length = 830
Score = 202 bits (515), Expect = 1e-50
Identities = 108/208 (51%), Positives = 146/208 (69%), Gaps = 4/208 (1%)
Query: 29 SAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLIC 88
SAA+RS G I LNVASSGIA+L L GGRTAHSRF IP+ ++++TCNI + S L+
Sbjct: 217 SAAVRSKGDISLNVASSGIAALRLDGGRTAHSRFDIPINPNESSTCNISRGSDLGELVKE 276
Query: 89 AKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPK 148
AK IIWDEAPM++K+CFE+L+RTL DI+ DKP GGKV+V GGDFRQ+LPVI
Sbjct: 277 AKLIIWDEAPMMSKHCFESLDRTLKDIVNNPG----DKPLGGKVIVFGGDFRQVLPVING 332
Query: 149 GGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPELATEIKEFAD*ILKIGDGDFES 208
GR++IV A +NSS +W++ KVL+LTKNMRL S +I++F+ IL +GDG
Sbjct: 333 AGREEIVFAALNSSYIWEHSKVLELTKNMRLLADISEHEKRDIEDFSKWILDVGDGKISQ 392
Query: 209 NERGESDIEIPKDLLIHDSENPLLDLID 236
G + I+IP++ LI+ +P+ +I+
Sbjct: 393 PNDGIALIDIPEEFLINGDNDPVESIIE 420
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 202 bits (515), Expect = 1e-50
Identities = 106/200 (53%), Positives = 140/200 (70%), Gaps = 4/200 (2%)
Query: 36 GMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAKFIIWD 95
G I LNVASSGIASLLL GGRTAHSRF IPL +T+TCN+++ S L+ AK IIWD
Sbjct: 1045 GDICLNVASSGIASLLLEGGRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWD 1104
Query: 96 EAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKGGRQDIV 155
EAPM++K CFE+L+++L DI+ + D PFGGK+++ GGDFRQILPVI GR+ IV
Sbjct: 1105 EAPMMSKYCFESLDKSLKDILSTPE----DMPFGGKLIIFGGDFRQILPVILAAGRELIV 1160
Query: 156 SATVNSSDLWKYCKVLKLTKNMRLCTTGSPELATEIKEFAD*ILKIGDGDFESNERGESD 215
+++NSS LW+YCKV KLTKNMRL A EI++F+ IL +G+G G +
Sbjct: 1161 KSSLNSSHLWQYCKVFKLTKNMRLLQDIDINEAREIEDFSKWILAVGEGKLNQPNDGVTQ 1220
Query: 216 IEIPKDLLIHDSENPLLDLI 235
I+I D+LI + +NP+ +I
Sbjct: 1221 IQIRDDILIPEGDNPIESII 1240
>ref|NP_914485.1| P0489A01.23 [Oryza sativa (japonica cultivar-group)]
Length = 1489
Score = 197 bits (502), Expect = 3e-49
Identities = 111/200 (55%), Positives = 138/200 (68%), Gaps = 5/200 (2%)
Query: 30 AAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICA 89
A +RS IVL VASS +ASLLLP GRTAHSRF IP+ D+T+ CNIK+ S+ LLI A
Sbjct: 1027 AKLRSQNKIVLAVASSRVASLLLPRGRTAHSRFKIPIDIDETSICNIKRGSMLAELLIEA 1086
Query: 90 KFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKG 149
IIWDEAPM ++ CFEAL+RTL DI+ Q +N PFGGK VVLGGDFRQILPV+PKG
Sbjct: 1087 SLIIWDEAPMTHRRCFEALDRTLRDILSQTCATNSIIPFGGKPVVLGGDFRQILPVVPKG 1146
Query: 150 GRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTG-SPELATEIKEFAD*ILKIGDGDFE- 207
R IV+A++ +SDLWK+ VL + NMRL T + E+ +F+ +L IG+G
Sbjct: 1147 SRHAIVNASITNSDLWKHVTVLTMNINMRLLNTNLEQKQKDELHDFSKWVLAIGNGTIPM 1206
Query: 208 SNERGESD---IEIPKDLLI 224
+ + GES IEIP DLLI
Sbjct: 1207 TTKEGESYPSWIEIPHDLLI 1226
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 196 bits (499), Expect = 7e-49
Identities = 113/238 (47%), Positives = 147/238 (61%), Gaps = 2/238 (0%)
Query: 32 IRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAKF 91
+RS G IVL VAS GIA+LLL GGRTAHSRF IPL + +TC+IKQ S LL
Sbjct: 1091 LRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSL 1150
Query: 92 IIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKGGR 151
I+WDEAPM N+ CFEAL+R+L DI+R + E N KPFGG VVLGGDFRQILPV+ KG R
Sbjct: 1151 ILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRR 1210
Query: 152 QDIVSATVNSSDLWKYCKVLKLTKNMRL-CTTGSPELATEIKEFAD*ILKIGDGDFESNE 210
IV+A++ S LW++ + KLT+NMRL C + + +FA IL IGDG S +
Sbjct: 1211 TQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSAD 1270
Query: 211 RGESDIEIPKDLLIHDSENPLLDLIDLHIPIWCRT*RLKSFWKDDAYCVLHWNVLRKL 268
GE IEIP DL++ +P +++ P + + + F + A RK+
Sbjct: 1271 -GEEWIEIPDDLILKKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETARKI 1327
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 196 bits (498), Expect = 9e-49
Identities = 108/205 (52%), Positives = 137/205 (66%), Gaps = 2/205 (0%)
Query: 32 IRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAKF 91
+RS G IVL VAS GIA+LLL GGRTAHSRF IPL + +TC+IKQ S LL
Sbjct: 1200 LRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSL 1259
Query: 92 IIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKGGR 151
I+WDEAPM N+ CFEAL+R+L DI+R + E N KPFGG VVLGGDFRQILPV+ KG R
Sbjct: 1260 ILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRR 1319
Query: 152 QDIVSATVNSSDLWKYCKVLKLTKNMRL-CTTGSPELATEIKEFAD*ILKIGDGDFESNE 210
IV+A++ S LW++ + KLT+NMRL C + + +FA IL IGDG S +
Sbjct: 1320 TQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSAD 1379
Query: 211 RGESDIEIPKDLLIHDSENPLLDLI 235
GE IEIP DL++ +P +++
Sbjct: 1380 -GEEWIEIPDDLILKKGGDPKEEIV 1403
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 196 bits (497), Expect = 1e-48
Identities = 108/216 (50%), Positives = 148/216 (68%), Gaps = 5/216 (2%)
Query: 32 IRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAKF 91
IRS G IVL VASSG+ASLLLP GRTAHSRF IP+ D+ + C+IK+ ++ L+
Sbjct: 999 IRSEGNIVLAVASSGVASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSL 1058
Query: 92 IIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKGGR 151
IIWDEAPM ++ CFEAL+RTL D++ + + SN PFGGK VVLGGDFRQILPVI KG R
Sbjct: 1059 IIWDEAPMTHRRCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTR 1118
Query: 152 QDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPE-LATEIKEFAD*ILKIGDGDFESNE 210
IV A++ +S LW++ +LKLT NMRL +G E ++++FA +L +GDG ++
Sbjct: 1119 NSIVDASITNSPLWQHVVLLKLTVNMRLFQSGLSEGRRHDLEQFARWVLALGDGMLPVSK 1178
Query: 211 R-GESD---IEIPKDLLIHDSENPLLDLIDLHIPIW 242
R ES+ I+IP DLLI S++ + +++ P +
Sbjct: 1179 RIDESEATWIDIPDDLLIRASDDKIYSIVNEVFPCY 1214
>gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353661|pir||H84464
probable helicase [imported] - Arabidopsis thaliana
Length = 1219
Score = 196 bits (497), Expect = 1e-48
Identities = 111/205 (54%), Positives = 137/205 (66%), Gaps = 17/205 (8%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T SAA+RS G IVLNVASSGIASLLL GGRTAHSR IPL ++ TCN+K S R NL+
Sbjct: 786 TLSAALRSKGDIVLNVASSGIASLLLEGGRTAHSRSGIPLNPNEFTTCNMKAGSDRANLV 845
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
A IIWDEAPM++++CFE+L+R+L DI D +KPFGGKVVV GGDFRQ+LPVI
Sbjct: 846 KEASLIIWDEAPMMSRHCFESLDRSLSDICGNCD----NKPFGGKVVVFGGDFRQVLPVI 901
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPELATEIKEFAD*ILKIGDGDF 206
P DIV A +NSS LW +CKVL LTKNM L + + IL +GDG
Sbjct: 902 PGADTADIVMAALNSSYLWSHCKVLTLTKNMCLFS-------------EEWILAVGDGRI 948
Query: 207 ESNERGESDIEIPKDLLIHDSENPL 231
GE+ I+IP + LI +++P+
Sbjct: 949 GEPNDGEALIDIPSEFLITKAKDPI 973
>dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1652
Score = 196 bits (497), Expect = 1e-48
Identities = 108/216 (50%), Positives = 148/216 (68%), Gaps = 5/216 (2%)
Query: 32 IRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAKF 91
IRS G IVL VASSG+ASLLLP GRTAHSRF IP+ D+ + C+IK+ ++ L+
Sbjct: 1198 IRSEGNIVLAVASSGVASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSL 1257
Query: 92 IIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKGGR 151
IIWDEAPM ++ CFEAL+RTL D++ + + SN PFGGK VVLGGDFRQILPVI KG R
Sbjct: 1258 IIWDEAPMTHRRCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTR 1317
Query: 152 QDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPE-LATEIKEFAD*ILKIGDGDFESNE 210
IV A++ +S LW++ +LKLT NMRL +G E ++++FA +L +GDG ++
Sbjct: 1318 NSIVDASITNSPLWQHVVLLKLTVNMRLFQSGLSEGRRHDLEQFARWVLALGDGMLPVSK 1377
Query: 211 R-GESD---IEIPKDLLIHDSENPLLDLIDLHIPIW 242
R ES+ I+IP DLLI S++ + +++ P +
Sbjct: 1378 RIDESEATWIDIPDDLLIRASDDKIYSIVNEVFPCY 1413
>gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa (japonica cultivar-group)]
Length = 1806
Score = 194 bits (493), Expect = 4e-48
Identities = 106/200 (53%), Positives = 135/200 (67%), Gaps = 5/200 (2%)
Query: 30 AAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICA 89
A IRS IVL VASSG+ASLLLP GRTAHSRF IP+ ++T+ CN+K+ ++ LL
Sbjct: 854 AKIRSSNKIVLAVASSGVASLLLPKGRTAHSRFKIPIDINETSLCNVKRGTMVAELLENT 913
Query: 90 KFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKG 149
IIWDEAPM ++ CFEAL+RTL DI+ + SN+ PFGGK VVLGGDFRQILPV+PKG
Sbjct: 914 SLIIWDEAPMTHRRCFEALDRTLRDILSEITPSNVIIPFGGKTVVLGGDFRQILPVVPKG 973
Query: 150 GRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPEL-ATEIKEFAD*ILKIGDGDFES 208
R IV A + +S LWK+ +L+L NMRL P E+ +F+ +L +GDG +
Sbjct: 974 SRSAIVDALITNSKLWKHVVMLRLNVNMRLLNPSLPSTQREELSDFSKWVLAVGDGTLPA 1033
Query: 209 NER-GESD---IEIPKDLLI 224
+R GES I IP DLL+
Sbjct: 1034 TKRDGESQPSWITIPDDLLV 1053
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 194 bits (492), Expect = 5e-48
Identities = 111/237 (46%), Positives = 154/237 (64%), Gaps = 8/237 (3%)
Query: 6 DMEELAKILSGIHYLNVASSGTFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIP 65
+M +L++I + YL A + +RS G IVL VASSG+A+LLL GGRTAHS F IP
Sbjct: 1044 NMAKLSEIENSKTYLWKA----ITTRLRSEGKIVLAVASSGVAALLLQGGRTAHSAFNIP 1099
Query: 66 LQTDKTATCNIKQDSLRENLLICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMD 125
+ TC IKQ S +LL+ I+WDEAPM N+NCFEAL+++L D+ R +E++
Sbjct: 1100 INLTDEYTCFIKQGSHIADLLMKTSLILWDEAPMANRNCFEALDKSLRDVQRCRNENSCQ 1159
Query: 126 KPFGGKVVVLGGDFRQILPVIPKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSP 185
KPFGG VVLGGDFRQILP++PKG R+ V+AT+ S LW++ +V LTKNMRL
Sbjct: 1160 KPFGGMTVVLGGDFRQILPIVPKGRREHTVNATIKCSYLWQHFEVFNLTKNMRLNYVSKD 1219
Query: 186 ELA-TEIKEFAD*ILKIGDGDFES-NERGESDIEIPKDLLIHDSENPLLDLIDLHIP 240
+ + EFA+ IL+IG+GD S +E+G + +P DLL+ ++P +I+ P
Sbjct: 1220 QTEHQKSAEFAEWILQIGNGDTISLDEKGW--VRMPSDLLLQKGDDPKAQIIESTYP 1274
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 193 bits (491), Expect = 6e-48
Identities = 103/211 (48%), Positives = 143/211 (66%), Gaps = 4/211 (1%)
Query: 32 IRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAKF 91
+RS G IV+ VASSGIA+LLL GGRTAHS F IP+ +TC IKQ S +LL+
Sbjct: 1138 LRSEGKIVIAVASSGIAALLLQGGRTAHSAFNIPINLTDESTCFIKQGSRIADLLMKTSL 1197
Query: 92 IIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVIPKGGR 151
I+WDEAPM N+NCFEAL+++L D+ R +E++ KPFGG VVLGGDFRQILP++PKG R
Sbjct: 1198 ILWDEAPMANRNCFEALDKSLRDVQRFRNENSYQKPFGGMTVVLGGDFRQILPIVPKGRR 1257
Query: 152 QDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPELA-TEIKEFAD*ILKIGDGD-FESN 209
+ V+A++ S LW++ +V LTKNMRL + + + EFA+ IL+IG+GD +
Sbjct: 1258 EHTVNASIKFSYLWQHFEVFNLTKNMRLNSVSKDQAEHQKTAEFAEWILRIGNGDTILLD 1317
Query: 210 ERGESDIEIPKDLLIHDSENPLLDLIDLHIP 240
E+G + +P DLL+ ++P ++D P
Sbjct: 1318 EKGW--VSMPSDLLLQKGDDPKAQIVDSTYP 1346
>ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50509840|dbj|BAD32013.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 193 bits (490), Expect = 8e-48
Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 5/214 (2%)
Query: 27 TFSAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLL 86
T A +RS IVL VASSG+ASLLLP GRTAHSRF IP+ D+T+ CNIK+ ++ LL
Sbjct: 1030 TIIAKLRSQNKIVLAVASSGVASLLLPRGRTAHSRFKIPIDIDETSICNIKRGTMLAELL 1089
Query: 87 ICAKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
IIWDEAPM ++ CFEAL+RTL DI+ + SN PFGGK +VLGGDF+QILPVI
Sbjct: 1090 AETALIIWDEAPMTHRRCFEALDRTLRDILSETCPSNSIVPFGGKPIVLGGDFKQILPVI 1149
Query: 147 PKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPE-LATEIKEFAD*ILKIGDGD 205
PKG RQ I++A++ +S+LWK+ +L L NMRL P+ E+ +F+ +L IG+G
Sbjct: 1150 PKGSRQAIINASITNSELWKHVALLSLNINMRLLNPMLPDNQKKELHDFSQWVLAIGNGT 1209
Query: 206 F----ESNERGESDIEIPKDLLIHDSENPLLDLI 235
+ E + I IP DLL+ S + + ++
Sbjct: 1210 LPMTAKEGENYPAWITIPDDLLVMTSGDKIAAIV 1243
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.342 0.152 0.494
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,908,261
Number of Sequences: 2540612
Number of extensions: 22736587
Number of successful extensions: 67397
Number of sequences better than 10.0: 177
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 67155
Number of HSP's gapped (non-prelim): 208
length of query: 369
length of database: 863,360,394
effective HSP length: 129
effective length of query: 240
effective length of database: 535,621,446
effective search space: 128549147040
effective search space used: 128549147040
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0026.17