BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0023.1
(416 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 364 2e-99
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 337 5e-91
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 337 5e-91
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 336 7e-91
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 330 4e-89
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 322 2e-86
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 321 2e-86
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 313 8e-84
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar... 312 1e-83
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 311 2e-83
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 308 2e-82
gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), ... 308 2e-82
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 308 2e-82
dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cu... 308 2e-82
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 307 4e-82
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 307 4e-82
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 298 2e-79
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 296 6e-79
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa... 294 3e-78
ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica c... 294 4e-78
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 364 bits (935), Expect = 2e-99
Identities = 195/419 (46%), Positives = 268/419 (63%), Gaps = 10/419 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
+LLL GGRTAHSRF+IP+ ++E STC++ S A +L + LIIW +H L
Sbjct: 888 ALLLDGGRTAHSRFAIPLQVNETSTCSISPDSDLASLLLRAKLIIWDEAPMLHRHCYEAL 947
Query: 58 QPPL*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCK 117
T + N P+ K++ F FR +P I GS +++ S+ LW CK
Sbjct: 948 DR---TLKDIVQADNHKPFGGKTITFGGDFRQILPVITKGSREQIIHASLTSSRLWNSCK 1004
Query: 118 VIKLTINMRLQHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDN 177
V+ LT NMRL A + IKE +DW+L++GD + ND ++ I+IP D+L+ +S +
Sbjct: 1005 VLTLTKNMRL--TADPTEKDNIKEFSDWILKLGDGKLSEPNDGEAAIDIPEDMLLLDSLH 1062
Query: 178 PILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTP 237
PI + + YP ++ NL + +F +RA+L T + V EVNN ++ ++PGE +Y S D
Sbjct: 1063 PIDSIANCVYPNLLQNLNDQTFFRERAILCPTNDDVSEVNNHIMDLLPGEVKEYFSSDKI 1122
Query: 238 CRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMV 297
C D + DA T EFLN +KCSG+PNH + LK+ VP+MLIRNL Q GL N T L V
Sbjct: 1123 CDFDTSVERDANMST-EFLNAIKCSGVPNHVLRLKLGVPVMLIRNLDQKYGLCNGTRLQV 1181
Query: 298 IALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEG 357
L +I A L+G+ +G Y+PRL LTP+D +PF+F RRQFP++ CF MTINKS+G
Sbjct: 1182 TQLGDRVIEAKVLTGSNAGNKVYLPRLVLTPADFRIPFRFQRRQFPVVPCFGMTINKSQG 1241
Query: 358 QSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
QSLSHVG+YLP+PVF+HGQLYVA+SRVKSR+GLKI I+D+ G T NVV++EVFQN
Sbjct: 1242 QSLSHVGIYLPRPVFSHGQLYVAVSRVKSRRGLKILIIDEEGNRGKTTTNVVFKEVFQN 1300
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 337 bits (863), Expect = 5e-91
Identities = 191/419 (45%), Positives = 263/419 (62%), Gaps = 5/419 (1%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
SLLL GGRTAHSRFSIP++ E S C ++ S A+++++ SLIIW +S +
Sbjct: 1010 SLLLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMMSKFCFEAL 1069
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
+F+ I + + K + F FR +P I A S++N++YLW +CKV++
Sbjct: 1070 DKSFSDIIKRVDNKVFGGKVMVFGGDFRQVLPVINGAGRAEIVMSSLNASYLWDHCKVLR 1129
Query: 121 LTINMRL-QHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPI 179
LT NMRL + S + EI+E +DWLL VGD V ND + I+IP +LL++E+DNPI
Sbjct: 1130 LTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIPEELLIQEADNPI 1189
Query: 180 LELVDFAY--PEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTP 237
+ Y P + + + +F++RA+LA E V +N +ML + EE YLS D+
Sbjct: 1190 EAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSI 1249
Query: 238 CRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMV 297
SD DS + T +FLN +K SG+P+H + LKV P+ML+RNL GL N T L +
Sbjct: 1250 DPSDSDS-LKNPVITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQI 1308
Query: 298 IALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEG 357
L +I+ A ++G + G YIP +++TPSDT LPFK RRQFP+ + FVMTINKS+G
Sbjct: 1309 TQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQG 1368
Query: 358 QSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
QSL VGLYLPKPVF+HGQLYVALSRV S+ GLKI I+D G + T NVV++EVFQN
Sbjct: 1369 QSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQN 1427
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 337 bits (863), Expect = 5e-91
Identities = 191/419 (45%), Positives = 263/419 (62%), Gaps = 5/419 (1%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
SLLL GGRTAHSRFSIP++ E S C ++ S A+++++ SLIIW +S +
Sbjct: 1001 SLLLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMMSKFCFEAL 1060
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
+F+ I + + K + F FR +P I A S++N++YLW +CKV++
Sbjct: 1061 DKSFSDIIKRVDNKVFGGKVMVFGGDFRQVLPVINGAGRAEIVMSSLNASYLWDHCKVLR 1120
Query: 121 LTINMRL-QHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPI 179
LT NMRL + S + EI+E +DWLL VGD V ND + I+IP +LL++E+DNPI
Sbjct: 1121 LTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIPEELLIQEADNPI 1180
Query: 180 LELVDFAY--PEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTP 237
+ Y P + + + +F++RA+LA E V +N +ML + EE YLS D+
Sbjct: 1181 EAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSI 1240
Query: 238 CRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMV 297
SD DS + T +FLN +K SG+P+H + LKV P+ML+RNL GL N T L +
Sbjct: 1241 DPSDSDS-LKNPVITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQI 1299
Query: 298 IALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEG 357
L +I+ A ++G + G YIP +++TPSDT LPFK RRQFP+ + FVMTINKS+G
Sbjct: 1300 TQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQG 1359
Query: 358 QSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
QSL VGLYLPKPVF+HGQLYVALSRV S+ GLKI I+D G + T NVV++EVFQN
Sbjct: 1360 QSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQN 1418
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 336 bits (862), Expect = 7e-91
Identities = 182/416 (43%), Positives = 254/416 (60%), Gaps = 2/416 (0%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
SLLL GGRTAHSRF IP++ HE STCN+ +GS AE++ LIIW +S +
Sbjct: 1058 SLLLEGGRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWDEAPMMSKYCFESL 1117
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
+ + +P+ K + F FR +P I S++NS++LW+YCKV K
Sbjct: 1118 DKSLKDILSTPEDMPFGGKLIIFGGDFRQILPVILAAGRELIVKSSLNSSHLWQYCKVFK 1177
Query: 121 LTINMRLQHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPIL 180
LT NMRL + + EI++ + W+L VG+ + ND + I+I D+L+ E DNPI
Sbjct: 1178 LTKNMRLLQDIDINEAREIEDFSKWILAVGEGKLNQPNDGVTQIQIRDDILIPEGDNPIE 1237
Query: 181 ELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTPCRS 240
++ Y + +F+ RA+L T + V +N+ MLS + GEE Y S D+ S
Sbjct: 1238 SIIKAVYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPS 1297
Query: 241 DEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMVIAL 300
D +D + +T +FLN +K SG+PNH + LKV P+ML+RNL GL N T L ++ L
Sbjct: 1298 DTRADKNP-VYTPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRL 1356
Query: 301 TPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEGQSL 360
++ L+GT+ G IPR+ LTPSD LPFK RRQFP+ + F MTINKS+GQSL
Sbjct: 1357 GDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSL 1416
Query: 361 SHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
+VG+YLPKPVF+HGQLYVA+SRVKS+ GLK+ I D +G N T NVV++E+F+N
Sbjct: 1417 GNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRN 1472
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 330 bits (847), Expect = 4e-89
Identities = 178/411 (43%), Positives = 250/411 (60%), Gaps = 2/411 (0%)
Query: 7 GGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPPL*TFN 65
GGRTAHSRF IP++ HE STCN+ +GS AE++ LIIW +S + +
Sbjct: 1259 GGRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWDEAPMMSKYCFESLDKSLK 1318
Query: 66 SFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIKLTINM 125
+ +P+ K + F FR +P I S++NS++LW+YCKV KLT NM
Sbjct: 1319 DILSTPEDMPFGGKLIIFGGDFRQILPVILAAGRELIVKSSLNSSHLWQYCKVFKLTKNM 1378
Query: 126 RLQHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPILELVDF 185
RL + + EI++ + W+L VG+ + ND + I+I D+L+ E DNPI ++
Sbjct: 1379 RLLQDIDINEAREIEDFSKWILAVGEGKLNQPNDGVTQIQIRDDILIPEGDNPIESIIKA 1438
Query: 186 AYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTPCRSDEDSD 245
Y + +F+ RA+L T + V +N+ MLS + GEE Y S D+ SD +D
Sbjct: 1439 VYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRAD 1498
Query: 246 IDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMVIALTPYII 305
+ +T +FLN +K SG+PNH + LKV P+ML+RNL GL N T L ++ L ++
Sbjct: 1499 KNP-VYTPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLV 1557
Query: 306 VATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEGQSLSHVGL 365
L+GT+ G IPR+ LTPSD LPFK RRQFP+ + F MTINKS+GQSL +VG+
Sbjct: 1558 QGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSLGNVGI 1617
Query: 366 YLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
YLPKPVF+HGQLYVA+SRVKS+ GLK+ I D +G N T NVV++E+F+N
Sbjct: 1618 YLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRN 1668
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 322 bits (824), Expect = 2e-86
Identities = 183/419 (43%), Positives = 257/419 (60%), Gaps = 5/419 (1%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
SLLL GGRTAHSRF+IP++ E S C + S A ++++ SLIIW +S +
Sbjct: 1333 SLLLEGGRTAHSRFAIPLNPDEFSVCKITPKSDLANLIKEASLIIWDEAPMMSKFCFESL 1392
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
+F + + + K + F FR +P I S++N++YLW +CKV+K
Sbjct: 1393 DKSFYDILNNKDNKVFGGKVVVFGGDFRQVLPVINGAGRVEIVMSSLNASYLWDHCKVLK 1452
Query: 121 LTINMRLQHAA-SSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPI 179
LT NMRL SS + EI++ +DWLL VGD + ND ++ I+IP +LL++E+ NPI
Sbjct: 1453 LTKNMRLLSGGLSSEEAKEIQQFSDWLLAVGDGRINEPNDGEALIDIPEELLIKEAGNPI 1512
Query: 180 LELVDFAY--PEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTP 237
+ Y P + + + +F++RA+LA T E V +N +ML + EE YLS D+
Sbjct: 1513 EAISKEIYGDPSELHMINDPKFFQRRAILAPTNEDVNTINQYMLEHLKSEERIYLSADSI 1572
Query: 238 CRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMV 297
+D DS + T +FLN ++ +G+P+H + LKV P+ML+RNL GL N T L +
Sbjct: 1573 DPTDSDSLANP-VITPDFLNSIQLTGMPHHALRLKVGAPVMLLRNLDPKGGLCNGTRLQI 1631
Query: 298 IALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEG 357
L ++ A ++ + G IP ++LTPSDT LPFK RRQFP+ + F MTINKS+G
Sbjct: 1632 TQLAKQVVQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAMTINKSQG 1691
Query: 358 QSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
QSL VGLYLPKPVF+HGQLYVALSRV S+KGLKI I+D G + T NVV++EVFQN
Sbjct: 1692 QSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTNVVFKEVFQN 1750
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 321 bits (823), Expect = 2e-86
Identities = 182/419 (43%), Positives = 256/419 (60%), Gaps = 5/419 (1%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
SLLL GGRTAHSRF IPI+ + +TC++ S A ML++ SLIIW +S +
Sbjct: 679 SLLLQGGRTAHSRFGIPINPDDFTTCHIVPNSDLANMLKEASLIIWDEAPMMSRYCFESL 738
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
+ N IG + P+ K + F FR +P I A +A+NS+YLW++CKV+
Sbjct: 739 DRSLNDVIGNIDGKPFGGKVVVFGGDFRQVLPVIHGAGRAEIVLAALNSSYLWEHCKVLT 798
Query: 121 LTINMRLQ-HAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPI 179
LT NMRL + + EIKE ++WLL VGD V ND + I+IP +LL++++++PI
Sbjct: 799 LTKNMRLMSNDLDKDEAEEIKEFSNWLLAVGDGRVSEPNDGEVLIDIPEELLIKDANDPI 858
Query: 180 LELVDFAYPEIVANLENH--AYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTP 237
+ Y ++ N+ +F+QRA+L V +N+ ML + GE YLS D+
Sbjct: 859 EAITKAVYGDLDLLQPNNDPKFFQQRAILCPRNTDVNTINDIMLDKLNGELVTYLSADSI 918
Query: 238 CRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMV 297
D S ++ T +FLN +K SG+PNH + LK+ P+ML+RN+ GL N T L V
Sbjct: 919 DPQDAAS-LNNPVLTPDFLNSIKLSGLPNHNLTLKIGTPVMLLRNIDPKGGLCNGTRLQV 977
Query: 298 IALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEG 357
+ +I+ A ++G + G I + ++PSDT LPF+ RRQFPI + F MTINKS+G
Sbjct: 978 TQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIAVAFAMTINKSQG 1037
Query: 358 QSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
QSL VG+YLPKPVF+HGQLYVALSRV S+KGLK+ IVD G + T NVV++E+FQN
Sbjct: 1038 QSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1096
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 313 bits (801), Expect = 8e-84
Identities = 178/402 (44%), Positives = 245/402 (60%), Gaps = 5/402 (1%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
SLLL GGRTAHSRF IP++ E S C ++ S A +++K SL+IW +S +
Sbjct: 863 SLLLEGGRTAHSRFGIPLNPDEFSVCKIKPKSDLANLVKKASLVIWDEAPMMSRFCFEAL 922
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
+F+ I + + K + F FR P I A S++N++YLW CKV+K
Sbjct: 923 DKSFSDIIKNTDNTVFGGKVVVFGGDFRQVFPVINGAGRAEIVMSSLNASYLWDNCKVLK 982
Query: 121 LTINMRL-QHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPI 179
LT N RL + S + + EI+E +DWLL VGD + ND + I+IP DLL+ +D PI
Sbjct: 983 LTKNTRLLANNLSETEAKEIQEFSDWLLAVGDGRINESNDGVAIIDIPEDLLITNADKPI 1042
Query: 180 LELVDFAY--PEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTP 237
+ + Y P+I+ + + +F+ RA+LA E V +N ++L + EE YLS D+
Sbjct: 1043 ESITNEIYGDPKILHEITDPKFFQGRAILASKNEDVNTINEYLLDQLHAEERIYLSADSI 1102
Query: 238 CRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMV 297
+D DS + T +FLN +K G+PNH + LKV P++L+RNL GL N T L +
Sbjct: 1103 DPTDSDS-LSNPVITPDFLNSIKLPGLPNHSLRLKVGAPVLLLRNLDPKGGLCNGTRLQI 1161
Query: 298 IALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEG 357
L I+ A ++G + G IP ++LTP++T LPFK RRQFP+ + FVMTINKSEG
Sbjct: 1162 TQLCTQIVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINKSEG 1221
Query: 358 QSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRG 399
QSL HVGLYLPKPVF+HGQLYVALSRV S+KGLKI I+D G
Sbjct: 1222 QSLEHVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDG 1263
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)]
Length = 2052
Score = 312 bits (800), Expect = 1e-83
Identities = 176/426 (41%), Positives = 259/426 (60%), Gaps = 12/426 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
SLLLP GRTAHSRF IPI I E S C++R+G+ AE++QK LIIW H + L
Sbjct: 993 SLLLPRGRTAHSRFKIPIDISENSICSIRRGTILAELIQKTLLIIWDEAPMTHRLCFEAL 1052
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L S P N I P+ K + FR +P I GS A+ +++ ++ LW++
Sbjct: 1053 DRTLRDLLSEHDPANAIVPFGGKVIVLGGDFRQILPVIQKGSRASIDDASITNSPLWRHV 1112
Query: 117 KVIKLTINMRLQHAASSSSSM-EIKELADWLLQVGDEIVKPINDDDSN----IEIPSDLL 171
K++ L INMRL + + + E+ A W+L +G+ V + +EIP DLL
Sbjct: 1113 KLLSLKINMRLLRSGLTQTKKDELDNFAKWVLHIGNGDVPATQRERETEPTWVEIPQDLL 1172
Query: 172 VRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKY 231
++ + I L+D +P+++ N + Y RA++ +V+++NN+++ ++PGEE +Y
Sbjct: 1173 IKTDGDKIPALIDEVFPDLLHNHTDPTYLSCRAIVCPNNGTVDDINNYVVGLLPGEEKEY 1232
Query: 232 LSYDTPCRSDED-SDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLR 290
LS DT +S E D+D + +EF N + + PNHR+VLK V IML+RNL QS GL
Sbjct: 1233 LSCDTIAKSSEHIPDLDL-LYPTEFPNSINVNNFPNHRLVLKKGVIIMLLRNLNQSMGLC 1291
Query: 291 NDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVM 350
N T L++ L +++ T L+G+K G ++PR+SL +++ PF RRQFP+ +C+ M
Sbjct: 1292 NGTRLLINVLGEWVLQRTILTGSKIGEIVFVPRISLNTTNSKWPFTLQRRQFPVRVCYAM 1351
Query: 351 TINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVY 410
TINKS+GQ+LSHVG+YL KPVFTHGQLYV +SR SR GLKI I DD ++ T NVVY
Sbjct: 1352 TINKSQGQTLSHVGVYLKKPVFTHGQLYVVISRATSRSGLKILIEDDNESCASETSNVVY 1411
Query: 411 EEVFQN 416
E+ ++
Sbjct: 1412 HEILRS 1417
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 311 bits (797), Expect = 2e-83
Identities = 174/420 (41%), Positives = 253/420 (59%), Gaps = 9/420 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWTIHSISTVI----L 57
+LLL GGRTAHSRF IP+ + E STC+++QGS AE+L+K SLI+W ++ I L
Sbjct: 1217 ALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSLILWDEAPMANRICFEAL 1276
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L G N P+ ++ FR +P + G ++++ +YLW++
Sbjct: 1277 DRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNASIKRSYLWQHF 1336
Query: 117 KVIKLTINMRLQHAASSSSSME-IKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRES 175
+ KLT NMRL + + + A W+L +GD D + IEIP DL++++
Sbjct: 1337 HIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSA-DGEEWIEIPDDLILKKG 1395
Query: 176 DNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYD 235
+P E+V YP +V N + + EQRA+L E+ E+N F+++MI GEE YLS D
Sbjct: 1396 GDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETAREINEFIMNMIEGEEITYLSCD 1455
Query: 236 TPCRSD-EDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTT 294
T C++ DS+ D + +EFLN + G+PNH + LKV +P+ML+RN+ QS+GL N T
Sbjct: 1456 TVCKATTNDSETDV-LYPTEFLNSLNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNGTR 1514
Query: 295 LMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINK 354
+ + L I A ++GT G YIPR+ +TP+++ PF RRQ+P+ +CF MTINK
Sbjct: 1515 MTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINK 1574
Query: 355 SEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVF 414
S+GQSL+ VGLYLPK VFTHGQLYVA SRV R GL+I + D+ + RN+VY+E+F
Sbjct: 1575 SQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1634
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 308 bits (790), Expect = 2e-82
Identities = 172/420 (40%), Positives = 253/420 (59%), Gaps = 9/420 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWTIHSISTVI----L 57
+LLL GGRTAHSRF IP+ + E STC+++QGS AE+L+K SLI+W ++ I L
Sbjct: 1108 ALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSLILWDEAPMANRICFEAL 1167
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L G N P+ ++ FR +P + G ++++ +YLW++
Sbjct: 1168 DRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNASIKRSYLWQHF 1227
Query: 117 KVIKLTINMRLQHAASSSSSME-IKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRES 175
+ KLT NMRL + + + A W+L +GD D + IEIP DL++++
Sbjct: 1228 HIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSA-DGEEWIEIPDDLILKKG 1286
Query: 176 DNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYD 235
+P E+V YP +V N + + EQRA+L E+ ++N F+++MI GEE YLS D
Sbjct: 1287 GDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETARKINEFIMNMIEGEEITYLSCD 1346
Query: 236 TPCRSD-EDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTT 294
T C++ DS+ D + +EFLN + G+PNH + LK+ +P+ML+RN+ QS+GL N T
Sbjct: 1347 TVCKATTNDSETDV-LYPTEFLNSLNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNGTR 1405
Query: 295 LMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINK 354
+ + L I A ++GT G YIPR+ +TP+++ PF RRQ+P+ +CF MTINK
Sbjct: 1406 MTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINK 1465
Query: 355 SEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVF 414
S+GQSL+ VGLYLPK VFTHGQLYVA SRV R GL+I + D+ + RN+VY+E+F
Sbjct: 1466 SQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1525
>gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa (japonica cultivar-group)]
Length = 1806
Score = 308 bits (790), Expect = 2e-82
Identities = 177/423 (41%), Positives = 256/423 (59%), Gaps = 12/423 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
SLLLP GRTAHSRF IPI I+E S CNV++G+ AE+L+ SLIIW H L
Sbjct: 873 SLLLPKGRTAHSRFKIPIDINETSLCNVKRGTMVAELLENTSLIIWDEAPMTHRRCFEAL 932
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L S I P N I P+ K++ FR +P +P GS + + + ++ LWK+
Sbjct: 933 DRTLRDILSEITPSNVIIPFGGKTVVLGGDFRQILPVVPKGSRSAIVDALITNSKLWKHV 992
Query: 117 KVIKLTINMRLQHAASSSSSME-IKELADWLLQVGDEIVKPINDDDSN----IEIPSDLL 171
+++L +NMRL + + S+ E + + + W+L VGD + D + I IP DLL
Sbjct: 993 VMLRLNVNMRLLNPSLPSTQREELSDFSKWVLAVGDGTLPATKRDGESQPSWITIPDDLL 1052
Query: 172 VRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKY 231
V + I+ +V Y + +A +N Y RA++ + V+E+NN+++S+IPG+E +Y
Sbjct: 1053 VMTDGDKIVAVVSEVYHDFLACYKNPEYLASRAIVCPSNSVVDEINNYVVSLIPGDEKEY 1112
Query: 232 LSYDTPCR-SDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLR 290
LSYDT + S++ D D + +E LN + + P HR+VLK V +ML++NL QS GL
Sbjct: 1113 LSYDTISKCSEQIPDFDL-LYPTELLNSIDANNFPTHRLVLKEGVTVMLLQNLNQSMGLC 1171
Query: 291 NDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVM 350
N T+L+V+ L I+ L+G+ G + IP++SL+ + PF RRQFPI +C+ M
Sbjct: 1172 NGTSLLVVGLGQRILNCVILTGSNIGETVCIPKISLSTTKLKWPFTLQRRQFPIRVCYSM 1231
Query: 351 TINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVY 410
TINKS+GQ+L VG+YL KPVFTHGQLYVA SR SR GL+I I +D G + T+NVVY
Sbjct: 1232 TINKSQGQTLQRVGVYLKKPVFTHGQLYVAFSRATSRSGLRILIENDDGSCGSETKNVVY 1291
Query: 411 EEV 413
E+
Sbjct: 1292 HEI 1294
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 308 bits (789), Expect = 2e-82
Identities = 178/427 (41%), Positives = 262/427 (60%), Gaps = 16/427 (3%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
SLLLP GRTAHSRF IPI I E S C++++G+ AE++QK SLIIW H L
Sbjct: 1016 SLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTHRRCFEAL 1075
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L S P N + P+ K + FR +P I G+ + +++ ++ LW++
Sbjct: 1076 DRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTRNSIVDASITNSPLWQHV 1135
Query: 117 KVIKLTINMRL-QHAASSSSSMEIKELADWLLQVGDEIV---KPINDDDSN-IEIPSDLL 171
++KLT+NMRL Q S ++++ A W+L +GD ++ K I++ ++ I+IP DLL
Sbjct: 1136 VLLKLTVNMRLFQSGLSEGRRHDLEQFARWVLALGDGMLPVSKRIDESEATWIDIPDDLL 1195
Query: 172 VRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKY 231
+R SD+ I +V+ +P V + +Y RA++ +V+E+N++M++MIPGE +Y
Sbjct: 1196 IRASDDKIYSIVNEVFPCYVHRYTDSSYLASRAIVCPNNSTVDEINDYMVAMIPGEMKEY 1255
Query: 232 LSYDTPCRSDE---DSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAG 288
LS DT ++ E D DI + +EFLN + + P HR+ LK +ML+RNL QS G
Sbjct: 1256 LSCDTISKTSEHIPDFDI---LYPTEFLNSINANNFPTHRLALKKGATVMLLRNLNQSLG 1312
Query: 289 LRNDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCF 348
L N T L+V++L ++ L+G+ G +IPR+ L+ + + PF RRQFP+ +C+
Sbjct: 1313 LCNGTRLLVLSLGHRLLECVILTGSNVGERAFIPRIVLSTTSSKWPFVLQRRQFPVRVCY 1372
Query: 349 VMTINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNV 408
MTINKS+GQ+LS VG+YL K VFTHGQLYVA+SR SR GL+I I DD G S+ TRNV
Sbjct: 1373 AMTINKSQGQTLSRVGVYLKKAVFTHGQLYVAVSRSTSRDGLRILIKDDDGACSSKTRNV 1432
Query: 409 VYEEVFQ 415
VY EV +
Sbjct: 1433 VYHEVLE 1439
>dbj|BAD81603.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 1652
Score = 308 bits (789), Expect = 2e-82
Identities = 178/427 (41%), Positives = 262/427 (60%), Gaps = 16/427 (3%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
SLLLP GRTAHSRF IPI I E S C++++G+ AE++QK SLIIW H L
Sbjct: 1215 SLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTHRRCFEAL 1274
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L S P N + P+ K + FR +P I G+ + +++ ++ LW++
Sbjct: 1275 DRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTRNSIVDASITNSPLWQHV 1334
Query: 117 KVIKLTINMRL-QHAASSSSSMEIKELADWLLQVGDEIV---KPINDDDSN-IEIPSDLL 171
++KLT+NMRL Q S ++++ A W+L +GD ++ K I++ ++ I+IP DLL
Sbjct: 1335 VLLKLTVNMRLFQSGLSEGRRHDLEQFARWVLALGDGMLPVSKRIDESEATWIDIPDDLL 1394
Query: 172 VRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKY 231
+R SD+ I +V+ +P V + +Y RA++ +V+E+N++M++MIPGE +Y
Sbjct: 1395 IRASDDKIYSIVNEVFPCYVHRYTDSSYLASRAIVCPNNSTVDEINDYMVAMIPGEMKEY 1454
Query: 232 LSYDTPCRSDE---DSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAG 288
LS DT ++ E D DI + +EFLN + + P HR+ LK +ML+RNL QS G
Sbjct: 1455 LSCDTISKTSEHIPDFDI---LYPTEFLNSINANNFPTHRLALKKGATVMLLRNLNQSLG 1511
Query: 289 LRNDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCF 348
L N T L+V++L ++ L+G+ G +IPR+ L+ + + PF RRQFP+ +C+
Sbjct: 1512 LCNGTRLLVLSLGHRLLECVILTGSNVGERAFIPRIVLSTTSSKWPFVLQRRQFPVRVCY 1571
Query: 349 VMTINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNV 408
MTINKS+GQ+LS VG+YL K VFTHGQLYVA+SR SR GL+I I DD G S+ TRNV
Sbjct: 1572 AMTINKSQGQTLSRVGVYLKKAVFTHGQLYVAVSRSTSRDGLRILIKDDDGACSSKTRNV 1631
Query: 409 VYEEVFQ 415
VY EV +
Sbjct: 1632 VYHEVLE 1638
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 307 bits (786), Expect = 4e-82
Identities = 180/418 (43%), Positives = 245/418 (58%), Gaps = 36/418 (8%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWTIHSISTVILQPPL 61
SLLL GGRTAHSRF IP++ E S L K
Sbjct: 343 SLLLEGGRTAHSRFGIPLNHDEFSVS-----------LDK-------------------- 371
Query: 62 *TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIKL 121
+F+ I N + K + F FR +P I A S++N++YLW +CKV+KL
Sbjct: 372 -SFSDIIKNTNNKVFGGKVVVFGGDFRQVLPVINGAGRAEIVMSSLNASYLWDHCKVLKL 430
Query: 122 TINMRL-QHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPIL 180
T NMRL + S++ + EI+E +DWLL V D + ND + I+IP DLL+ +D PI
Sbjct: 431 TKNMRLLANNLSATEAKEIQEFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKPIE 490
Query: 181 ELVDFAY--PEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTPC 238
+ + Y P+I+ + + +F+ RA+LA E V +N ++L + EE YLS D+
Sbjct: 491 TITNEIYGDPKILHEITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSID 550
Query: 239 RSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMVI 298
+D DS ++ T +FLN +K G+PNH + LKV P+ML+RNL GL N T L +
Sbjct: 551 PTDSDS-LNNPVITPDFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQIT 609
Query: 299 ALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEGQ 358
L I+ A ++G + G IP ++LTP+DT LPFK RRQFP+ + F MTINKS+GQ
Sbjct: 610 QLCTQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQ 669
Query: 359 SLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
SL H+GLYLPKPVF+HGQLYVALSRV S+KGLKI I+D G + T NVV++EVFQN
Sbjct: 670 SLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQN 727
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 307 bits (786), Expect = 4e-82
Identities = 180/418 (43%), Positives = 245/418 (58%), Gaps = 36/418 (8%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWTIHSISTVILQPPL 61
SLLL GGRTAHSRF IP++ E S L K
Sbjct: 1292 SLLLEGGRTAHSRFGIPLNHDEFSVS-----------LDK-------------------- 1320
Query: 62 *TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIKL 121
+F+ I N + K + F FR +P I A S++N++YLW +CKV+KL
Sbjct: 1321 -SFSDIIKNTNNKVFGGKVVVFGGDFRQVLPVINGAGRAEIVMSSLNASYLWDHCKVLKL 1379
Query: 122 TINMRL-QHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPIL 180
T NMRL + S++ + EI+E +DWLL V D + ND + I+IP DLL+ +D PI
Sbjct: 1380 TKNMRLLANNLSATEAKEIQEFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKPIE 1439
Query: 181 ELVDFAY--PEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTPC 238
+ + Y P+I+ + + +F+ RA+LA E V +N ++L + EE YLS D+
Sbjct: 1440 TITNEIYGDPKILHEITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSID 1499
Query: 239 RSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMVI 298
+D DS ++ T +FLN +K G+PNH + LKV P+ML+RNL GL N T L +
Sbjct: 1500 PTDSDS-LNNPVITPDFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQIT 1558
Query: 299 ALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEGQ 358
L I+ A ++G + G IP ++LTP+DT LPFK RRQFP+ + F MTINKS+GQ
Sbjct: 1559 QLCTQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQ 1618
Query: 359 SLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVYEEVFQN 416
SL H+GLYLPKPVF+HGQLYVALSRV S+KGLKI I+D G + T NVV++EVFQN
Sbjct: 1619 SLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQN 1676
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 298 bits (764), Expect = 2e-79
Identities = 166/431 (38%), Positives = 256/431 (58%), Gaps = 29/431 (6%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWTIHSISTVILQPPL 61
+LLL GGRTAHS F+IPI++ + STC ++QGS A++L K SLI+W + P+
Sbjct: 1155 ALLLQGGRTAHSAFNIPINLTDESTCFIKQGSRIADLLMKTSLILWD---------EAPM 1205
Query: 62 *TFNSFIGP*NCI--------------PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAV 107
N F + P+ ++ FR +P +P G T ++++
Sbjct: 1206 ANRNCFEALDKSLRDVQRFRNENSYQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNASI 1265
Query: 108 NSTYLWKYCKVIKLTINMRLQHAASSSSS-MEIKELADWLLQV--GDEIVKPINDDDSNI 164
+YLW++ +V LT NMRL + + + E A+W+L++ GD I + D+ +
Sbjct: 1266 KFSYLWQHFEVFNLTKNMRLNSVSKDQAEHQKTAEFAEWILRIGNGDTI---LLDEKGWV 1322
Query: 165 EIPSDLLVRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMI 224
+PSDLL+++ D+P ++VD YP + N Y E+RA+L T + V E+N +++ I
Sbjct: 1323 SMPSDLLLQKGDDPKAQIVDSTYPGLQYNCCKPKYLEERAILCPTNDDVNELNEYIMDQI 1382
Query: 225 PGEETKYLSYDTPCRSDEDSDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLV 284
G++ YLS+D+ +S S + +EFLN +K GIPNH++ LKV +P+ML+RN+
Sbjct: 1383 QGDKVTYLSHDSVSKSMSYSHEMEMLYPTEFLNSLKHPGIPNHQLKLKVGLPVMLLRNIN 1442
Query: 285 QSAGLRNDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPI 344
Q+AGL N T + + +I A ++GT G IP++ ++P++ PF +R+QFP+
Sbjct: 1443 QNAGLCNGTRMRITRFGKRVIEAEIITGTHIGDMVCIPQIIMSPNERKWPFVLNRKQFPL 1502
Query: 345 IMCFVMTINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNC 404
+CF MTINKS+GQ+L+ VGLYLP+ VFTHGQLYVA+SRV SR GLKI I D
Sbjct: 1503 SVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLYVAVSRVTSRDGLKIMIADKECPGEGM 1562
Query: 405 TRNVVYEEVFQ 415
+N+VY+E+FQ
Sbjct: 1563 VKNIVYKEIFQ 1573
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 296 bits (759), Expect = 6e-79
Identities = 163/394 (41%), Positives = 239/394 (60%), Gaps = 4/394 (1%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT-IHSISTVILQPP 60
+LLL GGRT HSRF IPI+ +E STCN+ +GS E++++ +LIIW +S +
Sbjct: 605 ALLLDGGRTTHSRFGIPINPNESSTCNISRGSDLGELVKEANLIIWDETPMMSKHCFESL 664
Query: 61 L*TFNSFIGP*NCIPYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYCKVIK 120
T + P+ K + F FR +P I +A+NS+Y+W++CKV++
Sbjct: 665 DRTLRDIMNNPGDKPFGGKGIVFGGDFRQVLPVINGAGREEIVFAALNSSYIWEHCKVLE 724
Query: 121 LTINMRLQHAASSSSSMEIKELADWLLQVGDEIVKPINDDDSNIEIPSDLLVRESDNPIL 180
LT NMRL S +I+ + W+L VGD + ND + I+IP + L+ ++P+
Sbjct: 725 LTKNMRLLANISEHEKRDIEYFSKWILDVGDGKISQPNDGIALIDIPEEFLINGDNDPVE 784
Query: 181 ELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKYLSYDTPCRS 240
+++ Y ++ +F+ RA+L T E V +N M+SM+ GEE YLS D+ +
Sbjct: 785 SIIEAVYGNTFMEEKDPKFFQGRAILCPTNEDVNSINEHMMSMLDGEERIYLSSDSIDPA 844
Query: 241 DEDS-DIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLRNDTTLMVIA 299
D S + DA ++++FLN V+ SG+PNH + LKV P+ML+RN+ + GL N T L V
Sbjct: 845 DTSSANNDA--YSADFLNSVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGTRLQVTQ 902
Query: 300 LTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVMTINKSEGQS 359
+ +I A ++G + G IPR+ +TPSDT LPFK RRQFP+ + F MTINKS+GQ+
Sbjct: 903 MADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTINKSQGQT 962
Query: 360 LSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIF 393
L VGLYLP+PVF+HGQLYVA+SRV S+ G K F
Sbjct: 963 LESVGLYLPRPVFSHGQLYVAISRVTSKTGTKFF 996
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 294 bits (753), Expect = 3e-78
Identities = 171/423 (40%), Positives = 244/423 (57%), Gaps = 12/423 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
SLLLP GRTAHSRF IPI I E S CN+++G+ AE+L + +LIIW H L
Sbjct: 1143 SLLLPRGRTAHSRFKIPIDIDETSICNIKRGTMLAELLAETALIIWDEAPMTHRRCFEAL 1202
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L S P N I P+ K + F+ +P IP GS ++++ ++ LWK+
Sbjct: 1203 DRTLRDILSETCPSNSIIPFGGKPIVLGGDFKQILPVIPKGSRQAIINASITNSELWKHV 1262
Query: 117 KVIKLTINMRLQHAA-SSSSSMEIKELADWLLQVGDEIVKPINDDDSN----IEIPSDLL 171
++ L INMRL + + E+ + + W+L +G+ + + N I IP DLL
Sbjct: 1263 ALLSLNINMRLLNPMLPDNQKKELHDFSQWVLAIGNGTLPMTAKEGENYPAWITIPDDLL 1322
Query: 172 VRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKY 231
V S + I +V Y + + + Y RA++ T +V+E+N++++ ++PG+ Y
Sbjct: 1323 VMTSGDKIAAIVHEVYSDFLTCYRDIEYLASRAIVCPTNTTVDEINDYIIGLVPGDSRVY 1382
Query: 232 LSYDTPCRSDED-SDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLR 290
LS DT +S E D D + EFLN + + P H++VLK V +ML+RNL QS GL
Sbjct: 1383 LSCDTISKSSEQIPDFDL-LYPPEFLNSINATNFPTHKLVLKEGVVVMLLRNLNQSIGLC 1441
Query: 291 NDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVM 350
N T L+V L I+ L+G+ G + YIPR++L + PF RRQFP+ +C+ M
Sbjct: 1442 NGTRLLVTVLGDRILQCIVLTGSNIGETVYIPRITLGTTKMKWPFTLQRRQFPVRVCYSM 1501
Query: 351 TINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVY 410
TINKS+GQ+L VG+YL KPVFTHGQLYVA+SRV SR GLKI I +D G T+N+VY
Sbjct: 1502 TINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIVY 1561
Query: 411 EEV 413
EV
Sbjct: 1562 SEV 1564
>ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50509840|dbj|BAD32013.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 294 bits (752), Expect = 4e-78
Identities = 171/423 (40%), Positives = 244/423 (57%), Gaps = 12/423 (2%)
Query: 2 SLLLPGGRTAHSRFSIPISIHEISTCNVRQGSPKAEMLQKVSLIIWT----IHSISTVIL 57
SLLLP GRTAHSRF IPI I E S CN+++G+ AE+L + +LIIW H L
Sbjct: 1052 SLLLPRGRTAHSRFKIPIDIDETSICNIKRGTMLAELLAETALIIWDEAPMTHRRCFEAL 1111
Query: 58 QPPL*TFNSFIGP*NCI-PYENKSLKFFSRFRVPIPYIPLGSIATTFSSAVNSTYLWKYC 116
L S P N I P+ K + F+ +P IP GS ++++ ++ LWK+
Sbjct: 1112 DRTLRDILSETCPSNSIVPFGGKPIVLGGDFKQILPVIPKGSRQAIINASITNSELWKHV 1171
Query: 117 KVIKLTINMRLQHAA-SSSSSMEIKELADWLLQVGDEIVKPINDDDSN----IEIPSDLL 171
++ L INMRL + + E+ + + W+L +G+ + + N I IP DLL
Sbjct: 1172 ALLSLNINMRLLNPMLPDNQKKELHDFSQWVLAIGNGTLPMTAKEGENYPAWITIPDDLL 1231
Query: 172 VRESDNPILELVDFAYPEIVANLENHAYFEQRALLAHTLESVEEVNNFMLSMIPGEETKY 231
V S + I +V Y + + + Y RA++ T +V+E+N++++ ++PG+ Y
Sbjct: 1232 VMTSGDKIAAIVHEVYSDFLTCYRDIEYLASRAIVCPTNTTVDEINDYIIGLVPGDSRVY 1291
Query: 232 LSYDTPCRSDED-SDIDA*WFTSEFLNDVKCSGIPNHRIVLKVEVPIMLIRNLVQSAGLR 290
LS DT +S E D D + EFLN + + P H++VLK V +ML+RNL QS GL
Sbjct: 1292 LSCDTISKSSEQIPDFDL-LYPPEFLNSINATNFPTHKLVLKEGVVVMLLRNLNQSIGLC 1350
Query: 291 NDTTLMVIALTPYIIVATALSGTKSG*SFYIPRLSLTPSDTDLPFKFSRRQFPIIMCFVM 350
N T L+V L I+ L+G+ G + YIPR++L + PF RRQFP+ +C+ M
Sbjct: 1351 NGTRLLVTVLGDRILQCIILTGSNIGETVYIPRITLGTTKMKWPFTLQRRQFPVRVCYSM 1410
Query: 351 TINKSEGQSLSHVGLYLPKPVFTHGQLYVALSRVKSRKGLKIFIVDDRGVVSNCTRNVVY 410
TINKS+GQ+L VG+YL KPVFTHGQLYVA+SRV SR GLKI I +D G T+N+VY
Sbjct: 1411 TINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIVY 1470
Query: 411 EEV 413
EV
Sbjct: 1471 SEV 1473
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.326 0.141 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 652,572,584
Number of Sequences: 2540612
Number of extensions: 25472752
Number of successful extensions: 76861
Number of sequences better than 10.0: 253
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 76269
Number of HSP's gapped (non-prelim): 360
length of query: 416
length of database: 863,360,394
effective HSP length: 131
effective length of query: 285
effective length of database: 530,540,222
effective search space: 151203963270
effective search space used: 151203963270
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 76 (33.9 bits)
Lotus: description of TM0023.1