Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0017.17
         (167 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM47506.1| iron-stress related protein [Citrus junos]             109  2e-23
ref|XP_506860.1| PREDICTED OSJNBa0030C08.45 gene product [Oryza ...   107  2e-22
gb|AAS49081.1| At3g07580 [Arabidopsis thaliana] gi|51970766|dbj|...    86  3e-16
gb|AAU15147.1| At5g48335 [Arabidopsis thaliana] gi|50897196|gb|A...    82  7e-15
gb|AAO53210.1| similar to Plasmodium falciparum (isolate 3D7). H...    42  0.005
ref|XP_643517.1| hypothetical protein DDB0217700 [Dictyostelium ...    42  0.005
gb|AAF13076.1| unknown protein [Arabidopsis thaliana] gi|1523148...    41  0.011
gb|EAA15591.1| hypothetical protein [Plasmodium yoelii yoelii]         38  0.12
emb|CAH04419.1| protein phosphatase 2C [Euplotes vannus]               35  0.78
gb|EAA57243.1| hypothetical protein MG08212.4 [Magnaporthe grise...    35  0.78
emb|CAD98436.1| hypothetical predicted protein, unknown function...    35  1.0
gb|EAK90001.1| uncharacterized protein [Cryptosporidium parvum] ...    35  1.0
ref|YP_203145.1| transcriptional regulator [Xanthomonas oryzae p...    35  1.0
emb|CAG09195.1| unnamed protein product [Tetraodon nigroviridis]       34  1.3
ref|XP_394600.2| PREDICTED: similar to ENSANGP00000022105 [Apis ...    34  1.3
gb|EAK99524.1| hypothetical protein CaO19.10868 [Candida albican...    34  1.7
gb|EAK99251.1| hypothetical protein CaO19.3360 [Candida albicans...    34  1.7
gb|EAL29929.1| GA16728-PA [Drosophila pseudoobscura]                   34  1.7
ref|XP_641336.1| hypothetical protein DDB0206474 [Dictyostelium ...    34  1.7
ref|NP_473327.1| hypothetical protein [Plasmodium falciparum 3D7...    33  2.3

>gb|AAM47506.1| iron-stress related protein [Citrus junos]
          Length = 166

 Score =  109 bits (273), Expect = 2e-23
 Identities = 62/112 (55%), Positives = 75/112 (66%), Gaps = 2/112 (1%)

Query: 14  VKRYAPPNQRNRSTNRRKSSDRLDRTNSI-GNDLEKNQFASSRNVQVQDRIDAVSSNLVN 72
           VKRYAPPNQRNRS NRRKS DR DR++++ GND EKNQ A+SRN  V D  D+ SSN  N
Sbjct: 19  VKRYAPPNQRNRSLNRRKSGDRFDRSSNLYGNDGEKNQLAASRNAAVTDHGDSGSSNFAN 78

Query: 73  ENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNN-SKDSPEKPVMYSGGTS 123
            N   R V L+G S S  +QLL DR  A    +++ S D  E+PV+YS G S
Sbjct: 79  VNSQPRLVPLEGFSRSEGAQLLKDRGRAIWNLFHDPSIDLSERPVLYSSGAS 130


>ref|XP_506860.1| PREDICTED OSJNBa0030C08.45 gene product [Oryza sativa (japonica
           cultivar-group)] gi|50910345|ref|XP_466661.1| putative
           iron-stress related protein [Oryza sativa (japonica
           cultivar-group)] gi|47497956|dbj|BAD20161.1| putative
           iron-stress related protein [Oryza sativa (japonica
           cultivar-group)] gi|47496841|dbj|BAD19601.1| putative
           iron-stress related protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 158

 Score =  107 bits (266), Expect = 2e-22
 Identities = 59/128 (46%), Positives = 81/128 (63%), Gaps = 5/128 (3%)

Query: 12  ESVKRYAPPNQRNRSTNRRKSSDRLDRTNSI-GNDLEKNQFASSRNVQVQDRIDAVSSNL 70
           + +KRY PP  RNR+ NRRKS DR ++ + +  ND EK+   S +N+      +   SN 
Sbjct: 7   DGIKRYTPPVHRNRANNRRKSGDRAEKASYLYNNDGEKSHAPSLKNLPPIIPHETFFSNP 66

Query: 71  VNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNN-SKDSPEKPVMYSGGT-SVW--T 126
            N+   +R + L+GC  S A+QLLNDRW AA+  YN+ S DSP+KPVMYSG + S W   
Sbjct: 67  QNDYSQTRLIPLEGCCASEAAQLLNDRWAAAMNLYNDQSYDSPDKPVMYSGSSGSSWGHG 126

Query: 127 HFRLPHQI 134
           H +LPHQ+
Sbjct: 127 HMKLPHQM 134


>gb|AAS49081.1| At3g07580 [Arabidopsis thaliana] gi|51970766|dbj|BAD44075.1|
           unnamed protein product [Arabidopsis thaliana]
          Length = 143

 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 56/150 (37%), Positives = 78/150 (51%), Gaps = 18/150 (12%)

Query: 8   APPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAVS 67
           A  S +  RY PPNQR  S NRRKS DR   ++   ND E+NQ              A  
Sbjct: 2   ADSSSNQNRYTPPNQRKASGNRRKSGDR--TSSQQNNDNERNQ------------PPATG 47

Query: 68  SNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNN-SKDSPEKPVMYSGGTSVWT 126
             + N +   R + +  CS SAA QL++ RW A +  Y++ + D   +P+MY GG SVW 
Sbjct: 48  LQMENISQTQRIITIKDCSRSAAYQLMSQRWAAEMHQYDDPTVDLSVRPIMYYGG-SVWG 106

Query: 127 HFRLPHQIMSPAASAPPSVSQLDFLGELNR 156
             +LPHQI++ A    P  S  D++ E+ R
Sbjct: 107 --KLPHQILAAANKTLPPPSPTDYMTEVRR 134


>gb|AAU15147.1| At5g48335 [Arabidopsis thaliana] gi|50897196|gb|AAT85737.1|
           At5g48335 [Arabidopsis thaliana]
           gi|42573618|ref|NP_974905.1| expressed protein
           [Arabidopsis thaliana]
          Length = 114

 Score = 81.6 bits (200), Expect = 7e-15
 Identities = 51/119 (42%), Positives = 67/119 (55%), Gaps = 23/119 (19%)

Query: 15  KRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSNLVNEN 74
           KRY PPNQRNRS+NRR+S                N+  SS++V V             EN
Sbjct: 18  KRYTPPNQRNRSSNRRRSR----------GSFHSNEGESSQSVAV---------GFQREN 58

Query: 75  PYSRFVALDGCSCSAASQLLNDRWTAAIQSYNN-SKDSPEKPVMYSGGTSVWTHFRLPH 132
              + ++++GCS S A QLL+DRWTAA+  YN+ S D  E+P+MY GG  VW   +LPH
Sbjct: 59  SSPKIISVEGCSRSEAFQLLSDRWTAAMHLYNDPSVDLSERPMMYYGG-DVWG--KLPH 114


>gb|AAO53210.1| similar to Plasmodium falciparum (isolate 3D7). Hypothetical
           protein [Dictyostelium discoideum]
          Length = 1264

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 30/118 (25%), Positives = 51/118 (42%), Gaps = 1/118 (0%)

Query: 6   HPAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDA 65
           HP  P +        N  N +TN   +++  + TN+  N+   N   ++ N    +  + 
Sbjct: 402 HPHHPHQRPPPQYGYNNNNNNTNNTNNNNN-NNTNNNNNNNNNNNNNNNNNNNNNNNNNN 460

Query: 66  VSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEKPVMYSGGTS 123
            ++N +N N  S   A          Q  ND+ TAAI   N  +DS   P+++ G T+
Sbjct: 461 NNNNNINSNNNSNNAAQQTQPSQQPPQEYNDQNTAAINLNNGMEDSTSLPIIHLGATN 518


>ref|XP_643517.1| hypothetical protein DDB0217700 [Dictyostelium discoideum]
           gi|60471731|gb|EAL69687.1| hypothetical protein
           DDB0217700 [Dictyostelium discoideum]
          Length = 1290

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 30/118 (25%), Positives = 51/118 (42%), Gaps = 1/118 (0%)

Query: 6   HPAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDA 65
           HP  P +        N  N +TN   +++  + TN+  N+   N   ++ N    +  + 
Sbjct: 429 HPHHPHQRPPPQYGYNNNNNNTNNTNNNNN-NNTNNNNNNNNNNNNNNNNNNNNNNNNNN 487

Query: 66  VSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEKPVMYSGGTS 123
            ++N +N N  S   A          Q  ND+ TAAI   N  +DS   P+++ G T+
Sbjct: 488 NNNNNINSNNNSNNAAQQTQPSQQPPQEYNDQNTAAINLNNGMEDSTSLPIIHLGATN 545


>gb|AAF13076.1| unknown protein [Arabidopsis thaliana] gi|15231484|ref|NP_187415.1|
           expressed protein [Arabidopsis thaliana]
          Length = 116

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 98  WTAAIQSYNN-SKDSPEKPVMYSGGTSVWTHFRLPHQIMSPAASAPPSVSQLDFLGELNR 156
           W A +  Y++ + D   +P+MY GG SVW   +LPHQI++ A    P  S  D++ E+ R
Sbjct: 51  WAAEMHQYDDPTVDLSVRPIMYYGG-SVWG--KLPHQILAAANKTLPPPSPTDYMTEVRR 107


>gb|EAA15591.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 1057

 Score = 37.7 bits (86), Expect = 0.12
 Identities = 30/113 (26%), Positives = 49/113 (42%), Gaps = 4/113 (3%)

Query: 3   ENLHPAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDR 62
           EN     P   +K      ++N S+N    +  LD + SI + + K      +N   + +
Sbjct: 101 ENSLNNEPDNKLKNNKEIEKKNNSSNLDTQNGLLDISTSIFSAITKRLTEMKKN---EKK 157

Query: 63  IDAVSSNLVNEN-PYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEK 114
           ID  S N VNEN P  + +  DG S S+ + +     T    +Y  + + P K
Sbjct: 158 IDTNSENFVNENMPRKKTILKDGNSASSNNNISEKYNTYETDAYLINDEEPTK 210


>emb|CAH04419.1| protein phosphatase 2C [Euplotes vannus]
          Length = 327

 Score = 35.0 bits (79), Expect = 0.78
 Identities = 28/94 (29%), Positives = 42/94 (43%), Gaps = 4/94 (4%)

Query: 64  DAVSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEKPVMYSG--G 121
           DAV +NL  +   S F   DG     ASQ++ D +   ++  ++ KD   +  +Y    G
Sbjct: 41  DAVIANLDFDEDTSLFGVFDGHGGKEASQVVKDNYERILKGDSSYKDGDCQKGLYDSFKG 100

Query: 122 TSVWTHFRLPHQIMSPAASAPPSVSQ--LDFLGE 153
           T V+   +   Q M   A + P V    L  LGE
Sbjct: 101 TDVFLGSKTGKQEMKAVADSNPEVKNPLLKILGE 134


>gb|EAA57243.1| hypothetical protein MG08212.4 [Magnaporthe grisea 70-15]
           gi|39946184|ref|XP_362629.1| hypothetical protein
           MG08212.4 [Magnaporthe grisea 70-15]
          Length = 526

 Score = 35.0 bits (79), Expect = 0.78
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 6   HPAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSR 55
           HPAPP  ++K     N  N ++    S+ R DRT S+G+D  +    S+R
Sbjct: 287 HPAPPPPAIKTSPHMNNGNGTSAGPPSATRSDRTGSVGSDDVEQSRPSTR 336


>emb|CAD98436.1| hypothetical predicted protein, unknown function [Cryptosporidium
           parvum]
          Length = 904

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 36  LDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSNLVNENP--YSRFVALDGCSCSAASQL 93
           +D+ N+IG  L+KN    S +  + D    +  N ++EN      F+  +  S   +SQ 
Sbjct: 29  IDKVNTIG--LDKNNSYESNSYHLDDESQFIIDNYLSENGELIKEFLGRNDFSNGNSSQ- 85

Query: 94  LNDRWTAAIQSYNNSKDSPE 113
             ++ TA+ +S NNSK+S E
Sbjct: 86  --NKLTASNESENNSKESQE 103


>gb|EAK90001.1| uncharacterized protein [Cryptosporidium parvum]
           gi|66475832|ref|XP_627732.1| hypothetical protein
           cgd6_3950 [Cryptosporidium parvum]
          Length = 961

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 36  LDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSNLVNENP--YSRFVALDGCSCSAASQL 93
           +D+ N+IG  L+KN    S +  + D    +  N ++EN      F+  +  S   +SQ 
Sbjct: 29  IDKVNTIG--LDKNNSYESNSYHLDDESQFIIDNYLSENGELIKEFLGRNDFSNGNSSQ- 85

Query: 94  LNDRWTAAIQSYNNSKDSPE 113
             ++ TA+ +S NNSK+S E
Sbjct: 86  --NKLTASNESENNSKESQE 103


>ref|YP_203145.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
           gi|58428723|gb|AAW77760.1| transcriptional regulator
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 206

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 31/108 (28%), Positives = 47/108 (42%), Gaps = 22/108 (20%)

Query: 11  SESVKRYAPPNQRNRST----------NRRKSSDRLDRT--NSIGNDLEKNQFASSRNVQ 58
           S  V +  P N   R T             +S+ RL  T  N+  N++ KNQF+S     
Sbjct: 68  SSDVAQIPPANAPERGTVTPIDLDAIIEHNRSNSRLGTTVLNAFNNNIFKNQFSSL---- 123

Query: 59  VQDRIDAVSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYN 106
             DR+     N     P+S   AL+ C   AAS +  +R+++ I + N
Sbjct: 124 --DRL----KNADLHRPFSAVDALEQCPAQAASAVALNRYSSMIDAPN 165


>emb|CAG09195.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 488

 Score = 34.3 bits (77), Expect = 1.3
 Identities = 40/163 (24%), Positives = 69/163 (41%), Gaps = 15/163 (9%)

Query: 7   PAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRN--------VQ 58
           P+P  E +    P   R +  + R  +  LD   SI +       +SS +        V+
Sbjct: 3   PSPLDERIVVALPRPVRPQELHLRLDTSYLDSITSISSSSSSGSGSSSSSSAVISTTVVK 62

Query: 59  VQDRIDAVSSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQSYNNSKDSPEKP-VM 117
           VQ + D V+  + +    +R ++   C CS+AS      +    QS ++S  S   P + 
Sbjct: 63  VQAKADIVTY-MPSSKGSTRSLS---CGCSSASCCSVTTYERDSQSLSHSPVSASSPNLS 118

Query: 118 YSG--GTSVWTHFRLPHQIMSPAASAPPSVSQLDFLGELNRQM 158
           Y+G  G  V  H  L    ++P  S  PS  ++    EL +++
Sbjct: 119 YAGPPGPRVSNHEALSTSSLTPGTSKAPSAVRVIHPNELAKRL 161


>ref|XP_394600.2| PREDICTED: similar to ENSANGP00000022105 [Apis mellifera]
          Length = 675

 Score = 34.3 bits (77), Expect = 1.3
 Identities = 33/127 (25%), Positives = 55/127 (42%), Gaps = 15/127 (11%)

Query: 18  APPNQRNRSTNRRKSSDRLDRT--NSIGNDLEKNQFASSRNVQVQDRIDAVS--SNLVNE 73
           APP +R +   R  ++   D+T  N++     +N+ + +++    D ++ +    NL  E
Sbjct: 195 APPTKRRKC--RENANTNADKTISNALSAKDSENKTSENQSTTGSDPVEIIPLMPNLKLE 252

Query: 74  NPYSRFVALDGCSCSAASQLLNDRWTAAI---QSYNNSKDSPEKP----VMYSGGTSVWT 126
            P   ++  DG SCS   Q L D     I    + +N+ D  +KP      YS   S   
Sbjct: 253 MP--EYLVQDGSSCSYEEQSLGDSSLNKIGIEDTSSNTPDHDQKPDITQTFYSSNQSTSD 310

Query: 127 HFRLPHQ 133
              L HQ
Sbjct: 311 SLDLKHQ 317


>gb|EAK99524.1| hypothetical protein CaO19.10868 [Candida albicans SC5314]
          Length = 668

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 36/164 (21%), Positives = 61/164 (36%), Gaps = 18/164 (10%)

Query: 7   PAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAV 66
           P PP +  ++          T   KSS      N  GN + K+   S   +        +
Sbjct: 388 PPPPQQQPQQQKSTTTTTTITTSPKSSTNTIELNKKGNRINKSISKSPSGINTPSSSSDI 447

Query: 67  SSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQS-------YNNSKDSPEKPVMY- 118
           SS   +     R ++    S S+ S L +D  T+ I S       Y ++ +SP     + 
Sbjct: 448 SSK--SSKSRKRKLSTSSSSSSSNSSLSDDNLTSNIGSTSINSTNYKSNYNSPPSEQEFD 505

Query: 119 --------SGGTSVWTHFRLPHQIMSPAASAPPSVSQLDFLGEL 154
                   S  T+  + F L +Q     +S+  S S++D+   L
Sbjct: 506 DHYYSSSSSSSTTTNSTFALSNQDQHNLSSSSSSTSKMDYYTNL 549


>gb|EAK99251.1| hypothetical protein CaO19.3360 [Candida albicans SC5314]
          Length = 667

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 36/164 (21%), Positives = 61/164 (36%), Gaps = 18/164 (10%)

Query: 7   PAPPSESVKRYAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAV 66
           P PP +  ++          T   KSS      N  GN + K+   S   +        +
Sbjct: 388 PPPPQQQPQQQKSTTTTTTITTSPKSSTNTIELNKKGNRINKSISKSPSGINTPSSSSDI 447

Query: 67  SSNLVNENPYSRFVALDGCSCSAASQLLNDRWTAAIQS-------YNNSKDSPEKPVMY- 118
           SS   +     R ++    S S+ S L +D  T+ I S       Y ++ +SP     + 
Sbjct: 448 SSK--SSKSRKRKLSTSSSSSSSNSSLSDDNLTSNIGSTSINSTNYKSNYNSPPSEQEFD 505

Query: 119 --------SGGTSVWTHFRLPHQIMSPAASAPPSVSQLDFLGEL 154
                   S  T+  + F L +Q     +S+  S S++D+   L
Sbjct: 506 DHYYSSSSSSSTTTNSTFALSNQDQHNLSSSSSSTSKMDYYTNL 549


>gb|EAL29929.1| GA16728-PA [Drosophila pseudoobscura]
          Length = 478

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 25/74 (33%), Positives = 36/74 (47%), Gaps = 1/74 (1%)

Query: 11  SESVKR-YAPPNQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSN 69
           S SV+R   PP  RNR+     +S R  R  S  ++ E N  ++S     ++R +  +SN
Sbjct: 307 SRSVERTLTPPPHRNRTGGGNGASGRKGRNRSPRHERENNSNSNSSGSNRENRAERNNSN 366

Query: 70  LVNENPYSRFVALD 83
             N N  SR V  D
Sbjct: 367 SNNGNNNSRRVDRD 380


>ref|XP_641336.1| hypothetical protein DDB0206474 [Dictyostelium discoideum]
           gi|60469362|gb|EAL67356.1| hypothetical protein
           DDB0206474 [Dictyostelium discoideum]
          Length = 509

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 16/63 (25%), Positives = 30/63 (47%)

Query: 21  NQRNRSTNRRKSSDRLDRTNSIGNDLEKNQFASSRNVQVQDRIDAVSSNLVNENPYSRFV 80
           N+ N  T    ++   + +N+  N+   N   S  N   +  I+  ++N  N N ++RF+
Sbjct: 246 NKENNPTTTTTTTTNTESSNNNNNNNNNNPTTSPTNKTNEPSIEKTNTNKANTNEFTRFL 305

Query: 81  ALD 83
            LD
Sbjct: 306 GLD 308


>ref|NP_473327.1| hypothetical protein [Plasmodium falciparum 3D7]
            gi|4493979|emb|CAB39038.1| hypothetical protein
            [Plasmodium falciparum 3D7]
          Length = 2706

 Score = 33.5 bits (75), Expect = 2.3
 Identities = 20/55 (36%), Positives = 26/55 (46%), Gaps = 1/55 (1%)

Query: 21   NQRNRSTNRRKSSDRLDRTNSIGND-LEKNQFASSRNVQVQDRIDAVSSNLVNEN 74
            N  N + N RKS  R  RTN   N+  +K  F +  NV+  DR+     N   EN
Sbjct: 2612 NNNNNNNNNRKSRKRSTRTNRKKNERTKKKNFENFLNVRKSDRLRNKEQNKKEEN 2666


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.311    0.125    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,673,790
Number of Sequences: 2540612
Number of extensions: 10117250
Number of successful extensions: 27830
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 27759
Number of HSP's gapped (non-prelim): 108
length of query: 167
length of database: 863,360,394
effective HSP length: 118
effective length of query: 49
effective length of database: 563,568,178
effective search space: 27614840722
effective search space used: 27614840722
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 70 (31.6 bits)


Lotus: description of TM0017.17