BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0010.5
(224 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ... 125 7e-28
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta... 122 8e-27
gb|AAV68820.1| hypothetical protein AT1G17390 [Arabidopsis thali... 116 5e-25
gb|AAF79490.1| F1L3.4 [Arabidopsis thaliana] gi|25402823|pir||D8... 116 5e-25
ref|NP_680357.1| RNase H domain-containing protein [Arabidopsis ... 114 2e-24
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 112 6e-24
pir||A96682 protein F1E22.12 [imported] - Arabidopsis thaliana g... 110 2e-23
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 109 5e-23
ref|NP_198321.2| hypothetical protein [Arabidopsis thaliana] 108 1e-22
dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like ... 107 2e-22
ref|NP_680680.1| reverse transcriptase-related [Arabidopsis thal... 107 3e-22
pir||B96652 protein F23N19.5 [imported] - Arabidopsis thaliana g... 105 1e-21
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali... 104 2e-21
ref|NP_850866.1| reverse transcriptase-related [Arabidopsis thal... 99 9e-20
ref|NP_680665.1| hypothetical protein [Arabidopsis thaliana] 98 2e-19
gb|AAG28895.1| F12A21.24 [Arabidopsis thaliana] 90 4e-17
ref|NP_175165.1| expressed protein [Arabidopsis thaliana] 87 3e-16
dbj|BAD45551.1| hypothetical protein [Oryza sativa (japonica cul... 87 3e-16
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 86 8e-16
ref|NP_850264.1| hypothetical protein [Arabidopsis thaliana] 86 1e-15
>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 125 bits (315), Expect = 7e-28
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 38 DATDDALIQRAHGTGDLRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFS 97
DA +D L++R + W P + W+ +NTDG+ A GGV+RD +G++LVGF+
Sbjct: 495 DAREDVLVERM-----IAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFA 549
Query: 98 ALLGRCSINFAELWGIYHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKN 157
+G CS AELWG+Y+G +A +RG+++V +E DSA V + G S P A LV+
Sbjct: 550 LNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRL 609
Query: 158 IKRTLSNFDQVHLKHVFREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTL 217
+S V + HV+RE N +AD A L F + D+ P +S L+ D T
Sbjct: 610 CHGFISKDWIVRITHVYREANRLADGLANYAFTLPFGFLLLDSCPEHVSSILLEDVMGTS 669
Query: 218 YHR 220
+ R
Sbjct: 670 FPR 672
>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25412100|pir||F84611 hypothetical protein
At2g22350 [imported] - Arabidopsis thaliana
gi|15227192|ref|NP_179822.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 321
Score = 122 bits (306), Expect = 8e-27
Identities = 62/165 (37%), Positives = 88/165 (52%)
Query: 56 WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYH 115
WV P D W+K+NTDG+ A GGVLRDHNG ++ GF+ +G CS AELWG+Y+
Sbjct: 153 WVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYY 212
Query: 116 GAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFR 175
G +A RG ++V +E DS V + G S P + L++ LS V + HV+R
Sbjct: 213 GLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYR 272
Query: 176 EINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
E N +AD A L + + ++ P +S L+ D Y R
Sbjct: 273 EANRLADGLANYAFSLSLGLHLLESRPDVVSSILLDDVAGVSYPR 317
>gb|AAV68820.1| hypothetical protein AT1G17390 [Arabidopsis thaliana]
gi|18394475|ref|NP_564020.1| hypothetical protein
[Arabidopsis thaliana] gi|9665118|gb|AAF97302.1|
Hypothetical protein [Arabidopsis thaliana]
Length = 272
Score = 116 bits (290), Expect = 5e-25
Identities = 60/167 (35%), Positives = 87/167 (51%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+ W PP W K+NTDG+ LA GGV+RD +GN+ GFS +G CS AELWG
Sbjct: 102 IAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGA 161
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A +RG ++ +E DS V + G S P + LV+ LS V + HV
Sbjct: 162 YYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHV 221
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
+RE N +AD A L + F ++++ P + + D + Y R
Sbjct: 222 YREANRLADGLANYAFFLPLGFHLFNSTPDIVMSIVHDDVAGSAYPR 268
>gb|AAF79490.1| F1L3.4 [Arabidopsis thaliana] gi|25402823|pir||D86310 protein
F1L3.4 [imported] - Arabidopsis thaliana
Length = 253
Score = 116 bits (290), Expect = 5e-25
Identities = 60/167 (35%), Positives = 87/167 (51%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+ W PP W K+NTDG+ LA GGV+RD +GN+ GFS +G CS AELWG
Sbjct: 83 IAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGA 142
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A +RG ++ +E DS V + G S P + LV+ LS V + HV
Sbjct: 143 YYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHV 202
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
+RE N +AD A L + F ++++ P + + D + Y R
Sbjct: 203 YREANRLADGLANYAFFLPLGFHLFNSTPDIVMSIVHDDVAGSAYPR 249
>ref|NP_680357.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 633
Score = 114 bits (285), Expect = 2e-24
Identities = 56/164 (34%), Positives = 88/164 (53%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
++W PP+ W K+NTDG+ LA GGV+RD G + VGF +G CS AELWG+
Sbjct: 450 IKWTPPSTGWFKLNTDGASRGNPGLATAGGVVRDGEGQWCVGFVLNIGICSAPLAELWGV 509
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A +RG +++ +E DS V + G S P + LV+ +S V + HV
Sbjct: 510 YYGLHIAWERGIRRLELEVDSTLVVGFLQAGIEDSHPLSFLVRLCYGFISRDWIVRISHV 569
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTL 217
+RE N +AD A L + F ++P+ ++ + D+ +
Sbjct: 570 YREANRLADGLANYAFSLPLGFHACGSMPAPVASIALEDAAGVV 613
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25408124|pir||C84716 hypothetical protein
At2g31080 [imported] - Arabidopsis thaliana
Length = 1231
Score = 112 bits (281), Expect = 6e-24
Identities = 57/167 (34%), Positives = 90/167 (53%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+RW P+D W+KI TDG+ LAA GG +R+ G +L GF+ +G C+ AELWG
Sbjct: 1061 IRWQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGA 1120
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A D+GF++V ++ D V ++ G + P + LV+ + + V + HV
Sbjct: 1121 YYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHV 1180
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
+RE N +AD A L + +DA P + + L+ D T + R
Sbjct: 1181 YREANRLADGLANYAFTLPLGLHCFDACPEGVRLLLLADVNGTEFPR 1227
>pir||A96682 protein F1E22.12 [imported] - Arabidopsis thaliana
gi|6686397|gb|AAF23831.1| F1E22.12 [Arabidopsis
thaliana]
Length = 1055
Score = 110 bits (276), Expect = 2e-23
Identities = 60/158 (37%), Positives = 83/158 (51%)
Query: 56 WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYH 115
WV P W+K+NTDG+ LA+ GGVLRD G + GFS +GRCS AELWG+Y+
Sbjct: 561 WVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYY 620
Query: 116 GAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFR 175
G A ++ +V +E DS V + G S P + LV+ L V + HV+R
Sbjct: 621 GLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYR 680
Query: 176 EINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDS 213
E N +AD A L + F +D +P +S L D+
Sbjct: 681 EANRLADGLANYAFSLSLGFHSFDLVPDAMSSLLREDT 718
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana] gi|25411326|pir||C84488 hypothetical protein
At2g07730 [imported] - Arabidopsis thaliana
Length = 970
Score = 109 bits (273), Expect = 5e-23
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 10/205 (4%)
Query: 26 KKLSQDFLYTLTDATDDAL----------IQRAHGTGDLRWVPPNDDWIKINTDGSYSPV 75
+KL +D L + D ++ ++RA +RW P+D W+K+ TDG+
Sbjct: 762 RKLCRDRLKFIKDIAEEVRKAHVGTLNNHVKRARVERMIRWKAPSDRWVKLTTDGASRGH 821
Query: 76 SNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYHGAKLALDRGFKKVMIESDSA 135
LAA G + + G +L GF+ +G C AELWG Y+G +A D+GF++V + DS
Sbjct: 822 QGLAAASGAILNLQGEWLGGFALNIGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSE 881
Query: 136 FAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFREINSVADAFAKNGLGLLMDF 195
V ++ G + P + LV+ + + V + HV+RE N +AD A L + F
Sbjct: 882 LVVGFLSTGISKAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFFLPLGF 941
Query: 196 RIYDAIPSFISVALMHDSCNTLYHR 220
++ P + + L+ D+ T + R
Sbjct: 942 HCFEICPEDVLLFLVEDANGTSFPR 966
>ref|NP_198321.2| hypothetical protein [Arabidopsis thaliana]
Length = 175
Score = 108 bits (269), Expect = 1e-22
Identities = 59/163 (36%), Positives = 84/163 (51%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+RW P+ W K+NTDG+ LA GG LR+ G + GF+ +GRCS AELWG+
Sbjct: 5 VRWSKPSLGWCKLNTDGASHGNPGLAIAGGALRNEYGEWCFGFALNIGRCSAPLAELWGV 64
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A DRG ++ +E DS V + G S P + LV+ LS V + HV
Sbjct: 65 YYGLFMAWDRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHV 124
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNT 216
+RE N +AD A L + + + + PS + L D T
Sbjct: 125 YREANRLADELANYAFDLPLGYHGFASPPSSLDSILRDDELGT 167
>dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 308
Score = 107 bits (268), Expect = 2e-22
Identities = 59/158 (37%), Positives = 84/158 (52%)
Query: 56 WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYH 115
WV P W+K+NTDG+ LA+ GGVLRD G + GFS +GRCS AELWG+Y+
Sbjct: 140 WVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYY 199
Query: 116 GAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFR 175
G A ++ +V +E DS V + G S P + LV+ L V + +V+R
Sbjct: 200 GLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSHPLSFLVRLCHNFLQKDWLVRIVYVYR 259
Query: 176 EINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDS 213
E N +AD A + L + F +D +P +S L D+
Sbjct: 260 EANCLADGLANYTILLSLGFHSFDFVPDAMSSLLKEDT 297
>ref|NP_680680.1| reverse transcriptase-related [Arabidopsis thaliana]
Length = 396
Score = 107 bits (266), Expect = 3e-22
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 56 WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYH 115
W P++ W +NTDG+ A GV+RD G++L GF+ +G CS AELWG+Y+
Sbjct: 228 WKKPSERWATVNTDGASHGNPGFATARGVVRDGEGSWLGGFALNIGVCSAPLAELWGVYY 287
Query: 116 GAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFR 175
G A +RG ++V++E +S V + G + P A LV+ + ++ V + HV+R
Sbjct: 288 GLVTAWERGVRRVVLEVESKLVVGFLQSGIRDTHPLAFLVRLCQGFIARDWLVRVTHVYR 347
Query: 176 EINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
E N +AD A L + ++ D P+ ++ ++ DS T + R
Sbjct: 348 EANRLADGLANYAFTLPIGLQLLDDCPASVNSIMVEDSVGTSFPR 392
>pir||B96652 protein F23N19.5 [imported] - Arabidopsis thaliana
gi|6630448|gb|AAF19536.1| F23N19.5 [Arabidopsis
thaliana]
Length = 233
Score = 105 bits (261), Expect = 1e-21
Identities = 56/159 (35%), Positives = 82/159 (51%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+RW P+ W K+NTDG+ LA GG LR+ G + GF+ +GRC AELWG+
Sbjct: 63 VRWSKPSLGWCKLNTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLAPLAELWGV 122
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A DRG ++ +E DS V + G S P + LV+ LS V + HV
Sbjct: 123 YYGLFMAWDRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHV 182
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHD 212
+RE N +AD A L + + + + P+ + L D
Sbjct: 183 YREANRLADGLANYAFDLPLGYHAFASPPNSLDSILRDD 221
>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197456|gb|AAM15081.1| putative reverse
transcriptase [Arabidopsis thaliana]
gi|25407930|pir||H84677 hypothetical protein At2g27870
[imported] - Arabidopsis thaliana
gi|15226268|ref|NP_180354.1| hypothetical protein
[Arabidopsis thaliana]
Length = 314
Score = 104 bits (259), Expect = 2e-21
Identities = 56/167 (33%), Positives = 83/167 (49%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+ W P + W K+NTDG+ LA+ GGVLRD G + GF+ +G CS AELWG+
Sbjct: 144 IAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGV 203
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A +R ++ IE DS V + G P + LV+ +S +V + HV
Sbjct: 204 YYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHV 263
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
+RE N +AD A L + F +P + L+ D+ R
Sbjct: 264 YREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSR 310
>ref|NP_850866.1| reverse transcriptase-related [Arabidopsis thaliana]
Length = 411
Score = 99.0 bits (245), Expect = 9e-20
Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 56 WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYH 115
W P W+K+NTDG+ LA GGVLRD GN+ GF+A +GRCS AELW +Y+
Sbjct: 244 WGSPGVGWVKLNTDGASRGNPGLATAGGVLRDEEGNWRGGFAANIGRCSAPLAELWEVYY 303
Query: 116 GAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFR 175
G A ++ +E DS V + G + P LV+ LS +V + HV+R
Sbjct: 304 GLYFAWAIRIPQLELEVDSEIVVGFLKTGISDTHPLFFLVRLCYGFLSKDWRVQITHVYR 363
Query: 176 EINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHDSCNTLYHR 220
E N + + A L D YD +S L D+ +Y R
Sbjct: 364 EANHL-NGLANYAFSLPSDLHFYDLCRDGLSSCLSDDARGAVYPR 407
>ref|NP_680665.1| hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 97.8 bits (242), Expect = 2e-19
Identities = 52/159 (32%), Positives = 81/159 (50%)
Query: 54 LRWVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGI 113
+ W ++ W K+NTDG+ LAA GGVLR+ NG + GF+ +G CS AELWG+
Sbjct: 44 ISWSRLSEGWCKLNTDGASRGNPGLAAAGGVLRESNGEWRRGFAINIGICSAPLAELWGV 103
Query: 114 YHGAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHV 173
Y+G +A + ++ +E DS V + G S P + LV+ +S V + H
Sbjct: 104 YYGLFMAWECKVSQLELEVDSEVVVGFLRTGISESHPLSFLVRMCYGFISRDWIVRISHK 163
Query: 174 FREINSVADAFAKNGLGLLMDFRIYDAIPSFISVALMHD 212
+RE N +AD A L + F+ + P + ++ D
Sbjct: 164 YREANRLADGLANYAFSLPLGFQFFYVCPDAVYSVMLED 202
>gb|AAG28895.1| F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 90.1 bits (222), Expect = 4e-17
Identities = 51/136 (37%), Positives = 69/136 (50%)
Query: 78 LAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYHGAKLALDRGFKKVMIESDSAFA 137
LA GGV+RD GN+ GF+ +GRCS AELWG+Y+G LA + +V +E DS
Sbjct: 657 LATAGGVIRDGAGNWCGGFALNIGRCSAPLAELWGVYYGFYLAWTKALTRVELEVDSELV 716
Query: 138 VNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFREINSVADAFAKNGLGLLMDFRI 197
V + G P + LV+ LS V + HV+RE N +AD A L + F
Sbjct: 717 VGFLKTGIGDQHPLSFLVRLCHGLLSKDWIVRITHVYREANRLADGLANYAFSLPLGFHS 776
Query: 198 YDAIPSFISVALMHDS 213
+P + V L DS
Sbjct: 777 LIDVPDDLEVILHEDS 792
>ref|NP_175165.1| expressed protein [Arabidopsis thaliana]
Length = 259
Score = 87.4 bits (215), Expect = 3e-16
Identities = 52/150 (34%), Positives = 75/150 (49%), Gaps = 3/150 (2%)
Query: 64 IKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYHGAKLALDR 123
+KINTDG+ LA GGVL+D+ G + GFS +GR S AELWG Y+G LA +R
Sbjct: 101 LKINTDGASRGNPGLATAGGVLQDNEGRWCGGFSLNIGRSSAPMAELWGAYYGLYLAWER 160
Query: 124 GFKKVMIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFREINSVADA 183
+ +E DS V + G P + LV+ +S +V + HV+RE N AD
Sbjct: 161 KSSHIELEVDSEIVVGFLKTGISDHHPLSFLVRLCHGFISKDWRVRIFHVYREANRFADG 220
Query: 184 FAKNGLGLLMDFRIYDAIPSFISVALMHDS 213
A L + F +P+ + + D+
Sbjct: 221 LANYVFSLPLGFHF---VPNVVDLFWKEDN 247
>dbj|BAD45551.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 240
Score = 87.4 bits (215), Expect = 3e-16
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 47 RAHGTGDLR-WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSI 105
RA+ + R W P + W+K+N DGS + +A+ GGV RDH+G +L+G++ +G +
Sbjct: 69 RAYSSASARIWRKPEEGWMKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATS 128
Query: 106 NFAELWGIYHGAKLALDRGFKKVMIESDSAFAVNLV-NKGCLPSKPAAALVKNIKRTLSN 164
+ AEL + G +LA+ G+++V E DS V++V ++ + S+ L + I L
Sbjct: 129 SVAELAALRRGLELAVRNGWRRVWAEGDSKAVVDVVCDRADVQSEEDLRLCREIAALLPQ 188
Query: 165 FDQVHLKHVFREINSVADAFAKNG 188
D + + HV R N VA FA+ G
Sbjct: 189 LDDMAVSHVRRGGNKVAHGFAELG 212
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
gi|25407453|pir||H85088 hypothetical protein AT4g08830
[imported] - Arabidopsis thaliana
Length = 947
Score = 85.9 bits (211), Expect = 8e-16
Identities = 41/101 (40%), Positives = 60/101 (58%)
Query: 56 WVPPNDDWIKINTDGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYH 115
W PP+ +W+K+NTDG+ LA GGVLRD G++ GF+ +G CS AELWG+Y+
Sbjct: 841 WKPPDGEWVKLNTDGASRGNLGLATTGGVLRDGIGHWCGGFALDIGVCSAPLAELWGVYY 900
Query: 116 GAKLALDRGFKKVMIESDSAFAVNLVNKGCLPSKPAAALVK 156
G +A +R F +V +E DS V + G + + LV+
Sbjct: 901 GLYMAWERRFTRVELEVDSELVVGFLTTGISDTHSLSFLVR 941
>ref|NP_850264.1| hypothetical protein [Arabidopsis thaliana]
Length = 197
Score = 85.5 bits (210), Expect = 1e-15
Identities = 44/145 (30%), Positives = 77/145 (52%)
Query: 69 DGSYSPVSNLAACGGVLRDHNGNYLVGFSALLGRCSINFAELWGIYHGAKLALDRGFKKV 128
DG+ LAA GG +RD N N++ F+ + CS AELWG+Y+G + ++G ++
Sbjct: 2 DGASRENPGLAAAGGAVRDGNENWVGVFALNIEICSAPLAELWGLYYGLHIVWEQGITRL 61
Query: 129 MIESDSAFAVNLVNKGCLPSKPAAALVKNIKRTLSNFDQVHLKHVFREINSVADAFAKNG 188
+E DS V + G S P + L++ +S V + HV+RE+N +AD A
Sbjct: 62 ELEVDSKIVVGFLQTGIPDSHPLSFLLRLCYGFISRDWLVRISHVYREVNRLADGLANYA 121
Query: 189 LGLLMDFRIYDAIPSFISVALMHDS 213
L + +++++P I+ ++ D+
Sbjct: 122 FSLPLGLYVFNSVPDSIASFVLEDA 146
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.139 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,720,921
Number of Sequences: 2540612
Number of extensions: 16617767
Number of successful extensions: 31983
Number of sequences better than 10.0: 472
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 31664
Number of HSP's gapped (non-prelim): 502
length of query: 224
length of database: 863,360,394
effective HSP length: 123
effective length of query: 101
effective length of database: 550,865,118
effective search space: 55637376918
effective search space used: 55637376918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0010.5