BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0010.21
(161 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB85510.1| putative protein [Arabidopsis thaliana] gi|11357... 200 1e-50
dbj|BAD94909.1| hypothetical protein [Arabidopsis thaliana] gi|9... 200 1e-50
gb|AAM64402.1| unknown [Arabidopsis thaliana] 199 3e-50
ref|XP_482018.1| hypothetical protein [Oryza sativa (japonica cu... 164 1e-39
ref|XP_588703.1| PREDICTED: similar to hypothetical protein [Bos... 119 2e-26
ref|XP_203592.1| PREDICTED: HESB like domain containing 1 [Mus m... 119 4e-26
dbj|BAB22467.1| unnamed protein product [Mus musculus] 119 4e-26
ref|XP_547905.1| PREDICTED: similar to HESB like domain containi... 117 8e-26
ref|XP_576075.1| PREDICTED: similar to HESB like domain containi... 117 1e-25
emb|CAD62580.1| unnamed protein product [Homo sapiens] 117 1e-25
emb|CAH92372.1| hypothetical protein [Pongo pygmaeus] 117 1e-25
ref|XP_344253.2| PREDICTED: similar to HESB like domain containi... 116 2e-25
gb|AAH32893.1| HESB like domain containing 1 [Homo sapiens] gi|3... 116 2e-25
gb|AAH15771.2| HESB like domain containing 1 [Homo sapiens] 115 4e-25
gb|AAM50684.1| GH27470p [Drosophila melanogaster] gi|10726751|gb... 113 2e-24
gb|EAL28261.1| GA12415-PA [Drosophila pseudoobscura] 109 2e-23
ref|XP_319229.2| ENSANGP00000019241 [Anopheles gambiae str. PEST... 106 2e-22
emb|CAG10610.1| unnamed protein product [Tetraodon nigroviridis] 104 7e-22
ref|XP_525556.1| PREDICTED: similar to HESB like domain containi... 103 1e-21
gb|AAW27011.1| unknown [Schistosoma japonicum] 102 3e-21
>emb|CAB85510.1| putative protein [Arabidopsis thaliana] gi|11357865|pir||T48417
hypothetical protein F8F6.110 - Arabidopsis thaliana
Length = 757
Score = 200 bits (508), Expect = 1e-50
Identities = 99/156 (63%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
Query: 5 SLFRRLAPSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKE 64
SL +R+AP LA R R+N +L +FSS+S+ +++S SS + VH+++NC+RRMKE
Sbjct: 603 SLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMKE 662
Query: 65 LEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVK 124
L++SE K LRL VETGGCSGFQY F+LD+R N DDRVFE+ G+KLVVDN+SYD VK
Sbjct: 663 LQSSEPEK--KMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVK 720
Query: 125 GATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160
GAT+DY EELIR+AFVV NPSAVGGCSCKSSFMVK
Sbjct: 721 GATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 756
>dbj|BAD94909.1| hypothetical protein [Arabidopsis thaliana]
gi|9758020|dbj|BAB08617.1| unnamed protein product
[Arabidopsis thaliana] gi|18414394|ref|NP_568130.1|
hesB-like domain-containing protein [Arabidopsis
thaliana]
Length = 158
Score = 200 bits (508), Expect = 1e-50
Identities = 99/156 (63%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
Query: 5 SLFRRLAPSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKE 64
SL +R+AP LA R R+N +L +FSS+S+ +++S SS + VH+++NC+RRMKE
Sbjct: 4 SLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMKE 63
Query: 65 LEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVK 124
L++SE K LRL VETGGCSGFQY F+LD+R N DDRVFE+ G+KLVVDN+SYD VK
Sbjct: 64 LQSSEPEK--KMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVK 121
Query: 125 GATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160
GAT+DY EELIR+AFVV NPSAVGGCSCKSSFMVK
Sbjct: 122 GATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157
>gb|AAM64402.1| unknown [Arabidopsis thaliana]
Length = 158
Score = 199 bits (505), Expect = 3e-50
Identities = 98/156 (62%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
Query: 5 SLFRRLAPSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKE 64
SL +R++P LA R R+N +L +FSS+S+ +++S SS + VH+++NC+RRMKE
Sbjct: 4 SLVKRVSPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMKE 63
Query: 65 LEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVK 124
L++SE K LRL VETGGCSGFQY F+LD+R N DDRVFE+ G+KLVVDN+SYD VK
Sbjct: 64 LQSSEPEK--KMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVK 121
Query: 125 GATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160
GAT+DY EELIR+AFVV NPSAVGGCSCKSSFMVK
Sbjct: 122 GATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157
>ref|XP_482018.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|38637278|dbj|BAD03542.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|38637225|dbj|BAD03491.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 177
Score = 164 bits (414), Expect = 1e-39
Identities = 88/141 (62%), Positives = 105/141 (74%), Gaps = 3/141 (2%)
Query: 6 LFRRLAPSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEP--VHMTENCLRRMK 63
L RR+A L R R + +L S SS SSSS AT +S S +P VHMT+ C+RR+K
Sbjct: 11 LLRRVAALLGGRVRASHRLLS-SSPSSSSAAAAATERASPPSPADPDTVHMTDGCIRRLK 69
Query: 64 ELEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFV 123
EL A E + K LRLSVE GGCSGFQY+F LDD+ NSDDR+FE+EG+KLVVD++SYDFV
Sbjct: 70 ELHAKEPPSEGKMLRLSVEAGGCSGFQYSFSLDDKKNSDDRIFEKEGVKLVVDDVSYDFV 129
Query: 124 KGATVDYVEELIRSAFVVTEN 144
KGATVDY EELIRSAFVV+ N
Sbjct: 130 KGATVDYEEELIRSAFVVSLN 150
>ref|XP_588703.1| PREDICTED: similar to hypothetical protein [Bos taurus]
Length = 267
Score = 119 bits (299), Expect = 2e-26
Identities = 67/134 (50%), Positives = 88/134 (65%), Gaps = 8/134 (5%)
Query: 28 SSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGC 86
++S L + + SS + + +H+T++C++R+ E+ E SE LRL VE GGC
Sbjct: 140 AASRGPRALREVSFSSPEAGEGQ-IHLTDSCVQRLLEITEGSEF------LRLEVEGGGC 192
Query: 87 SGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPS 146
SGFQY F LD IN DDRVFE+ G ++VVD+ S FVKGA VD+ +ELIRS+F V NP
Sbjct: 193 SGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDFSQELIRSSFQVLNNPQ 252
Query: 147 AVGGCSCKSSFMVK 160
A GCSC SSF VK
Sbjct: 253 AQQGCSCGSSFSVK 266
>ref|XP_203592.1| PREDICTED: HESB like domain containing 1 [Mus musculus]
Length = 154
Score = 119 bits (297), Expect = 4e-26
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 7/122 (5%)
Query: 40 TTSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDR 98
TTSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD
Sbjct: 38 TTSSIPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTV 91
Query: 99 INSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFM 158
IN DDRVFE+ G ++VVD+ S FVKGA VD+ +ELIRS+F V NP A GCSC SSF
Sbjct: 92 INPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFS 151
Query: 159 VK 160
VK
Sbjct: 152 VK 153
>dbj|BAB22467.1| unnamed protein product [Mus musculus]
Length = 163
Score = 119 bits (297), Expect = 4e-26
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 7/122 (5%)
Query: 40 TTSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDR 98
TTSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD
Sbjct: 47 TTSSIPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTV 100
Query: 99 INSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFM 158
IN DDRVFE+ G ++VVD+ S FVKGA VD+ +ELIRS+F V NP A GCSC SSF
Sbjct: 101 INPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFS 160
Query: 159 VK 160
VK
Sbjct: 161 VK 162
>ref|XP_547905.1| PREDICTED: similar to HESB like domain containing 1 [Canis
familiaris]
Length = 162
Score = 117 bits (294), Expect = 8e-26
Identities = 67/127 (52%), Positives = 85/127 (66%), Gaps = 9/127 (7%)
Query: 40 TTSSSSSSHVEPVHMTENCL----RRM--KELEASESATAPKTLRLSVETGGCSGFQYAF 93
T+SSS + +H+T +C+ RR+ + LE +E + + LRL VE GGCSGFQY F
Sbjct: 38 TSSSSPEAGEGQIHLTNSCVQVGVRRLPGRLLEITEGS---EFLRLEVEGGGCSGFQYKF 94
Query: 94 DLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSC 153
LD IN DDRVFE+ G K+VVD+ S FVKGA VD+ +ELIRS+F V NP A GCSC
Sbjct: 95 SLDTVINPDDRVFEQGGAKVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSC 154
Query: 154 KSSFMVK 160
SSF +K
Sbjct: 155 GSSFSIK 161
>ref|XP_576075.1| PREDICTED: similar to HESB like domain containing 1 [Rattus
norvegicus]
Length = 154
Score = 117 bits (293), Expect = 1e-25
Identities = 64/122 (52%), Positives = 82/122 (66%), Gaps = 7/122 (5%)
Query: 40 TTSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDR 98
TTSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD
Sbjct: 38 TTSSIPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTV 91
Query: 99 INSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFM 158
IN DDRVFE+ G ++VVD+ S +VKGA VD+ +ELIRS+F V NP A GCSC SSF
Sbjct: 92 INPDDRVFEQGGARVVVDSDSLAYVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFS 151
Query: 159 VK 160
+K
Sbjct: 152 IK 153
>emb|CAD62580.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 117 bits (293), Expect = 1e-25
Identities = 64/121 (52%), Positives = 82/121 (66%), Gaps = 7/121 (5%)
Query: 41 TSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDRI 99
+SSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD I
Sbjct: 43 SSSSPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTVI 96
Query: 100 NSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMV 159
N DDRVFE+ G ++VVD+ S FVKGA VD+ +ELIRS+F V NP A GCSC SSF +
Sbjct: 97 NPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSI 156
Query: 160 K 160
K
Sbjct: 157 K 157
>emb|CAH92372.1| hypothetical protein [Pongo pygmaeus]
Length = 154
Score = 117 bits (293), Expect = 1e-25
Identities = 64/121 (52%), Positives = 82/121 (66%), Gaps = 7/121 (5%)
Query: 41 TSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDRI 99
+SSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD I
Sbjct: 39 SSSSPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTVI 92
Query: 100 NSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMV 159
N DDRVFE+ G ++VVD+ S FVKGA VD+ +ELIRS+F V NP A GCSC SSF +
Sbjct: 93 NPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSI 152
Query: 160 K 160
K
Sbjct: 153 K 153
>ref|XP_344253.2| PREDICTED: similar to HESB like domain containing 1 [Rattus
norvegicus]
Length = 203
Score = 116 bits (290), Expect = 2e-25
Identities = 63/122 (51%), Positives = 82/122 (66%), Gaps = 7/122 (5%)
Query: 40 TTSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDR 98
TTSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD
Sbjct: 87 TTSSIPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTV 140
Query: 99 INSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFM 158
IN DDRVFE+ G ++VVD+ + +VKGA VD+ +ELIRS+F V NP A GCSC SSF
Sbjct: 141 INPDDRVFEQGGARVVVDSDNLAYVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFS 200
Query: 159 VK 160
+K
Sbjct: 201 IK 202
>gb|AAH32893.1| HESB like domain containing 1 [Homo sapiens]
gi|34996487|ref|NP_919255.1| HESB like domain containing
1 [Homo sapiens]
Length = 154
Score = 116 bits (290), Expect = 2e-25
Identities = 64/121 (52%), Positives = 82/121 (66%), Gaps = 7/121 (5%)
Query: 41 TSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDRI 99
+SSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD I
Sbjct: 39 SSSSPEAGEGQICLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTVI 92
Query: 100 NSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMV 159
N DDRVFE+ G ++VVD+ S FVKGA VD+ +ELIRS+F V NP A GCSC SSF +
Sbjct: 93 NPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSI 152
Query: 160 K 160
K
Sbjct: 153 K 153
>gb|AAH15771.2| HESB like domain containing 1 [Homo sapiens]
Length = 154
Score = 115 bits (288), Expect = 4e-25
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Query: 41 TSSSSSSHVEPVHMTENCLRRMKEL-EASESATAPKTLRLSVETGGCSGFQYAFDLDDRI 99
+SSS + + +T++C++R+ E+ E SE LRL VE GGCSGFQY F LD I
Sbjct: 39 SSSSPEAGEGQIRLTDSCVQRLLEITEGSEF------LRLQVEGGGCSGFQYKFSLDTVI 92
Query: 100 NSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMV 159
N DDRVFE+ G ++V D+ S FVKGA VD+ +ELIRS+F V NP A GCSC SSF +
Sbjct: 93 NPDDRVFEQGGARVVFDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSI 152
Query: 160 K 160
K
Sbjct: 153 K 153
>gb|AAM50684.1| GH27470p [Drosophila melanogaster] gi|10726751|gb|AAF56310.2|
CG13623-PA [Drosophila melanogaster]
gi|24649697|ref|NP_651267.1| CG13623-PA [Drosophila
melanogaster]
Length = 139
Score = 113 bits (282), Expect = 2e-24
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
Query: 35 VLHDATTSSSSSSHVEPVHMTENCLRRMKELEASESATAPKTLRLSVETGGCSGFQYAFD 94
++ AT S+S++ + V ++E+CL+R++E+ S LR++VE GGCSGFQY FD
Sbjct: 19 LMRHATASTSANPELS-VQVSESCLKRLREICVDGSF-----LRVTVEGGGCSGFQYKFD 72
Query: 95 LDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCK 154
LD ++N DDR F K+V+D +S ++ GATVDY ELIR+ F + NP A GCSC
Sbjct: 73 LDKQLNEDDRQFGEAEAKVVIDTVSLEYCSGATVDYHSELIRAGFRMVANPLAEQGCSCG 132
Query: 155 SSFMVK 160
SSF +K
Sbjct: 133 SSFSIK 138
>gb|EAL28261.1| GA12415-PA [Drosophila pseudoobscura]
Length = 140
Score = 109 bits (273), Expect = 2e-23
Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 39 ATTSSSSSSHVEPVHMTENCLRRMKELEASESATAPKTLRLSVETGGCSGFQYAFDLDDR 98
A+ +S++ + + ++E+CL+R++E+ S LR++VE GGCSGFQY FDLD +
Sbjct: 23 ASRHVASANPEQKIQVSESCLKRLREICIDGSF-----LRITVEGGGCSGFQYKFDLDSK 77
Query: 99 INSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFM 158
+N DD F E K+V+D +S ++ G+TVDY ELIR+ F + NP A GCSC SSF
Sbjct: 78 MNEDDLQFGEEKAKVVIDTVSLEYCTGSTVDYHSELIRAGFRMVANPLAEQGCSCGSSFS 137
Query: 159 VK 160
VK
Sbjct: 138 VK 139
>ref|XP_319229.2| ENSANGP00000019241 [Anopheles gambiae str. PEST]
gi|55236294|gb|EAA14541.2| ENSANGP00000019241 [Anopheles
gambiae str. PEST]
Length = 141
Score = 106 bits (264), Expect = 2e-22
Identities = 54/134 (40%), Positives = 83/134 (61%), Gaps = 8/134 (5%)
Query: 27 FSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKELEASESATAPKTLRLSVETGGC 86
FSS +L A +++ +S V+ ++ C+ R+KE+ S LR++VE GGC
Sbjct: 15 FSSLLQRRLLSSAAPNAADASSVQ---LSNTCINRLKEICKQNSF-----LRVAVEGGGC 66
Query: 87 SGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPS 146
SGFQY F ++ ++ DD + R+G+++ +D+ S +++ GAT+DY ELIRS F V NP
Sbjct: 67 SGFQYKFSVEKQLGEDDIIVSRDGVQVAIDSASIEYLSGATIDYHTELIRSGFRVINNPK 126
Query: 147 AVGGCSCKSSFMVK 160
A GCSC +SF VK
Sbjct: 127 ADQGCSCGASFTVK 140
>emb|CAG10610.1| unnamed protein product [Tetraodon nigroviridis]
Length = 289
Score = 104 bits (260), Expect = 7e-22
Identities = 50/84 (59%), Positives = 61/84 (72%)
Query: 77 LRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIR 136
LR+ VE GGCSGFQY F + D ++DRVFE+ G+ ++VD S +FVKGATVDY ELIR
Sbjct: 205 LRIHVEGGGCSGFQYKFSVVDDKTNEDRVFEKRGVSVIVDPDSLEFVKGATVDYTNELIR 264
Query: 137 SAFVVTENPSAVGGCSCKSSFMVK 160
S+F V NP A GCSC SSF +K
Sbjct: 265 SSFQVLRNPQADHGCSCGSSFSIK 288
Score = 94.7 bits (234), Expect = 8e-19
Identities = 54/123 (43%), Positives = 73/123 (58%), Gaps = 12/123 (9%)
Query: 17 RFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKELEASESATAPKT 76
R Q L FSS+S+ L S + +H+TE+C++ + LE E
Sbjct: 36 RSPQTTALRRFSSTSAQENLDVPPPSE------DKIHLTESCVKAKEILERGEY------ 83
Query: 77 LRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIR 136
LR+ VE GGCSGFQY F + D ++DRVFE+ G+ ++VD S +FVKGATVDY ELIR
Sbjct: 84 LRIHVEGGGCSGFQYKFSVVDDKTNEDRVFEKRGVSVIVDPDSLEFVKGATVDYTNELIR 143
Query: 137 SAF 139
S+F
Sbjct: 144 SSF 146
>ref|XP_525556.1| PREDICTED: similar to HESB like domain containing 1 [Pan
troglodytes]
Length = 345
Score = 103 bits (258), Expect = 1e-21
Identities = 57/119 (47%), Positives = 75/119 (62%), Gaps = 5/119 (4%)
Query: 42 SSSSSSHVEPVHMTENCLRRMKELEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINS 101
SSS + + +T++C++R+ E+ + LRL VE G CSGFQY LD IN
Sbjct: 231 SSSPEAGDGQIRLTDSCVQRLLEITKGS-----EFLRLQVEGGRCSGFQYRCSLDTVINP 285
Query: 102 DDRVFEREGIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160
D RVFE+ G ++VVD+ S KGA VD+ +ELIRS+F V+ NP A GCSC SSF VK
Sbjct: 286 DHRVFEQGGARVVVDSDSLAVAKGAQVDFSQELIRSSFQVSNNPQAQQGCSCGSSFSVK 344
>gb|AAW27011.1| unknown [Schistosoma japonicum]
Length = 137
Score = 102 bits (255), Expect = 3e-21
Identities = 45/107 (42%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Query: 54 MTENCLRRMKELEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKL 113
+T+NC+++++E+E+ + +R+ V++GGCSGFQY F L D+I D + ++EG +
Sbjct: 34 LTKNCVQKLREIESKGAL-----MRVLVDSGGCSGFQYKFQLVDKIQETDEIIKQEGASV 88
Query: 114 VVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160
V+D++S D +KG+T+DY +ELIRS F + NP CSC SF K
Sbjct: 89 VIDSVSRDLIKGSTIDYEDELIRSGFCIINNPQVDKSCSCGVSFSPK 135
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,145,437
Number of Sequences: 2540612
Number of extensions: 8257975
Number of successful extensions: 65487
Number of sequences better than 10.0: 547
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 63939
Number of HSP's gapped (non-prelim): 753
length of query: 161
length of database: 863,360,394
effective HSP length: 117
effective length of query: 44
effective length of database: 566,108,790
effective search space: 24908786760
effective search space used: 24908786760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0010.21